miRNEST 2.0, an integrative microRNA resource :: BLAST
>45260_miR819:micropc
Length = 116
Score = 107 bits (54), Expect = 2e-24
Identities = 101/116 (87%), Gaps = 2/116 (1%)
Strand = Plus / Plus
Query: 20 ttataagactttctagcattgcccacattcatatagatgttaatgaatctagac--aagt 77
|||||||||||||||||||| ||| ||||||||| ||||||||||||||| || | |
Sbjct: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
Query: 78 gtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 133
||||||| |||||||||||||||||| ||| ||| | || ||||||||||||||||
Sbjct: 61 gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
Score = 99.6 bits (50), Expect = 6e-22
Identities = 100/116 (86%), Gaps = 2/116 (1%)
Strand = Plus / Minus
Query: 20 ttataagactttctagcattgcccacattcatatagatgttaatgaatctagacaagtgt 79
|||||||||||||||| || | ||| ||| |||||||||||||||||| |||||| | |
Sbjct: 116 ttataagactttctagtatngtccatatttatatagatgttaatgaatatagacacatat 57
Query: 80 --gtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 133
|| ||||||||||||||| ||||||||| ||| ||||||||||||||||||||
Sbjct: 56 atgtttagattcattaacatatatatgaatatggataatgctagaaagtcttataa 1
>45075_miR819:micropc
Length = 116
Score = 107 bits (54), Expect = 2e-24
Identities = 101/116 (87%), Gaps = 2/116 (1%)
Strand = Plus / Plus
Query: 20 ttataagactttctagcattgcccacattcatatagatgttaatgaatctagacaagt-- 77
|||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||| |
Sbjct: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
Query: 78 gtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 133
||||||| |||||||||||||||||| ||| ||| | || ||||||||||||||||
Sbjct: 61 gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
Score = 99.6 bits (50), Expect = 6e-22
Identities = 100/116 (86%), Gaps = 2/116 (1%)
Strand = Plus / Minus
Query: 20 ttataagactttctagcattgcccacattcatatagatgttaatgaatctagacaagtgt 79
|||||||||||||||| || | ||| ||| |||||||||||||||||| |||||| | |
Sbjct: 116 ttataagactttctagtatngtccatatttatatagatgttaatgaatatagacacatat 57
Query: 80 --gtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 133
|| ||||||||||||||| ||||||||| ||| ||||||||||||||||||||
Sbjct: 56 atgtttagattcattaacatatatatgaatatggataatgctagaaagtcttataa 1
>45731_miR446:micropc
Length = 86
Score = 97.6 bits (49), Expect = 2e-21
Identities = 77/86 (89%), Gaps = 4/86 (4%)
Strand = Plus / Plus
Query: 36 cattgcccacattcatatagatgttaatgaatctagacaa----gtgtgtctagattcat 91
||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||||
Sbjct: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
Query: 92 taacatctatatgaatgtgggcaatg 117
||||||| ||||||||||||||||||
Sbjct: 61 taacatcaatatgaatgtgggcaatg 86
Score = 81.8 bits (41), Expect = 1e-16
Identities = 75/86 (87%), Gaps = 4/86 (4%)
Strand = Plus / Minus
Query: 36 cattgcccacattcatatagatgttaatgaatctag----acaagtgtgtctagattcat 91
|||||||||||||||||| ||||||||||||||||| ||| | ||| |||||||||
Sbjct: 86 cattgcccacattcatattgatgttaatgaatctagacacacatatatgtttagattcat 27
Query: 92 taacatctatatgaatgtgggcaatg 117
||| |||||||||||||||| |||||
Sbjct: 26 taaaatctatatgaatgtggacaatg 1
>45687_miR819:micropc
Length = 84
Score = 87.7 bits (44), Expect = 2e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataa 133
|||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 32 attcattaacatatatatgaatgtgggcaatgctagaaagtcttataa 79
Score = 87.7 bits (44), Expect = 2e-18
Identities = 47/48 (97%)
Strand = Plus / Minus
Query: 20 ttataagactttctagcattgcccacattcatatagatgttaatgaat 67
||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 79 ttataagactttctagcattgcccacattcatatatatgttaatgaat 32
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 15 tcaggttataagactttctagcattgcccacattcat 51
||||||||||||||||||| ||||| | |||||||||
Sbjct: 1 tcaggttataagactttctggcattactcacattcat 37
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 102 atgaatgtgggcaatgctagaaagtcttataacctga 138
||||||||| | ||||| |||||||||||||||||||
Sbjct: 37 atgaatgtgagtaatgccagaaagtcttataacctga 1
>45215_miR1120:micropc
Length = 142
Score = 83.8 bits (42), Expect = 3e-17
Identities = 103/123 (83%), Gaps = 4/123 (3%)
Strand = Plus / Plus
Query: 27 actttctagcattgcccacattcatatagatgttaatgaatctagaca----agtgtgtc 82
||||||||||||||||||| ||||| || ||||||||||||||||| | |||||
Sbjct: 20 actttctagcattgcccacgttcatttatatgttaatgaatctagatatatttatgtgtt 79
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacg 142
|| ||||||||||||||||||| || || |||||| |||||| ||||||| |||||||
Sbjct: 80 taaattcattaacatctatatgtatatgagcaatgttagaaattcttatattatgaaacg 139
Query: 143 gag 145
|||
Sbjct: 140 gag 142
Score = 83.8 bits (42), Expect = 3e-17
Identities = 103/123 (83%), Gaps = 4/123 (3%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatagatgttaatgaat 67
|||||||||| ||||||| |||||| |||||| || || |||||||||||||||||||
Sbjct: 142 ctccgtttcataatataagaatttctaacattgctcatatacatatagatgttaatgaat 83
Query: 68 ctagaca----agtgtgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|| ||| | | | ||||||||||||||||| || ||||| ||||||||||||||||
Sbjct: 82 ttaaacacataaatatatctagattcattaacatataaatgaacgtgggcaatgctagaa 23
Query: 124 agt 126
|||
Sbjct: 22 agt 20
>45603_miR819:micropc
Length = 61
Score = 77.8 bits (39), Expect = 2e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 15 tcaggttataagactttctagcattgcccacattcatat 53
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcaggttataagactttctagcattgcccacattcatat 39
Score = 77.8 bits (39), Expect = 2e-15
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 100 atatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atatgaatgtgggcaatgctagaaagtcttataacctga 1
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 115 atgctagaaagtcttataacctga 138
||||||||||||||||||||||||
Sbjct: 38 atgctagaaagtcttataacctga 61
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 tcaggttataagactttctagcat 38
||||||||||||||||||||||||
Sbjct: 61 tcaggttataagactttctagcat 38
>44978_miR1130:micropc
Length = 144
Score = 77.8 bits (39), Expect = 2e-15
Identities = 94/112 (83%), Gaps = 4/112 (3%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctagacaa----gtg 78
||||||||||||||||| || |||||||||||||| ||| |||||| ||| |||
Sbjct: 128 taagactttctagcattacctgtattcatatagatgtcaataaatctaaacatatatgtg 69
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 130
|| ||||||||||| ||| ||||| ||||||| ||||||||||||||||||
Sbjct: 68 tgcttagattcattagcatatatataaatgtggacaatgctagaaagtctta 17
Score = 69.9 bits (35), Expect = 5e-13
Identities = 93/112 (83%), Gaps = 4/112 (3%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatct----agacaagtg 78
|||||||||||||||||| ||||||| ||||| ||| |||||||||| | ||| |
Sbjct: 17 taagactttctagcattgtccacatttatatatatgctaatgaatctaagcacacatata 76
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 130
||| |||||| ||| |||||||||||||| || |||||||||||||||||
Sbjct: 77 tgtttagatttattgacatctatatgaatacaggtaatgctagaaagtctta 128
>46464_miR1132:micropc
Length = 149
Score = 73.8 bits (37), Expect = 3e-14
Identities = 86/102 (84%), Gaps = 4/102 (3%)
Strand = Plus / Plus
Query: 27 actttctagcattgcccacattcatatagatgttaatgaatctag----acaagtgtgtc 82
||||||||||||||| || |||||||||||| ||||||||||||| | | |||||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaa 124
||||||||||||| ||||||| ||| |||| | |||||||||
Sbjct: 83 tagattcattaacttctatataaatatgggtagtgctagaaa 124
Score = 65.9 bits (33), Expect = 8e-12
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 82 ctagattcattaacatctatatgaatgtgggcaatgctagaaagt 126
||||||||||||| |||||||||||| || |||||||||||||||
Sbjct: 67 ctagattcattaatatctatatgaatatgtgcaatgctagaaagt 23
>45514_miR1132:micropc
Length = 149
Score = 73.8 bits (37), Expect = 3e-14
Identities = 86/102 (84%), Gaps = 4/102 (3%)
Strand = Plus / Plus
Query: 27 actttctagcattgcccacattcatatagatgttaatgaatctag----acaagtgtgtc 82
||||||||||||||| || |||||||||||| ||||||||||||| | | |||||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaa 124
||||||||||||| ||||||| ||| |||| | |||||||||
Sbjct: 83 tagattcattaacttctatataaatatgggtagtgctagaaa 124
Score = 65.9 bits (33), Expect = 8e-12
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 82 ctagattcattaacatctatatgaatgtgggcaatgctagaaagt 126
||||||||||||| |||||||||||| || |||||||||||||||
Sbjct: 67 ctagattcattaatatctatatgaatatgtgcaatgctagaaagt 23
>45099_miR1132:micropc
Length = 149
Score = 73.8 bits (37), Expect = 3e-14
Identities = 86/102 (84%), Gaps = 4/102 (3%)
Strand = Plus / Plus
Query: 27 actttctagcattgcccacattcatatagatgttaatgaatctag----acaagtgtgtc 82
||||||||||||||| || |||||||||||| ||||||||||||| | | |||||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaa 124
||||||||||||| ||||||| ||| |||| | |||||||||
Sbjct: 83 tagattcattaacttctatataaatatgggtagtgctagaaa 124
Score = 65.9 bits (33), Expect = 8e-12
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 82 ctagattcattaacatctatatgaatgtgggcaatgctagaaagt 126
||||||||||||| |||||||||||| || |||||||||||||||
Sbjct: 67 ctagattcattaatatctatatgaatatgtgcaatgctagaaagt 23
>46670_miR809:micropc
Length = 97
Score = 69.9 bits (35), Expect = 5e-13
Identities = 66/76 (86%), Gaps = 4/76 (5%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaa----gtgtgtctag 85
||||| |||| |||||||||||||| |||||||||||| |||||| ||||||||||
Sbjct: 97 ttctaacattacccacattcatatatatgttaatgaatgtagacatatatgtgtgtctag 38
Query: 86 attcattaacatctat 101
||| ||||||||||||
Sbjct: 37 atttattaacatctat 22
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||| |||||||||||| |||||||||||||| |||| |||||
Sbjct: 53 tgtctacattcattaacatatatatgaatgtgggtaatgttagaa 97
>44980_miR808:micropc
Length = 97
Score = 69.9 bits (35), Expect = 5e-13
Identities = 66/76 (86%), Gaps = 4/76 (5%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaa----gtgtgtctag 85
||||| |||| |||||||||||||| |||||||||||| |||||| ||||||||||
Sbjct: 97 ttctaacattacccacattcatatatatgttaatgaatgtagacatatatgtgtgtctag 38
Query: 86 attcattaacatctat 101
||| ||||||||||||
Sbjct: 37 atttattaacatctat 22
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||| |||||||||||| |||||||||||||| |||| |||||
Sbjct: 53 tgtctacattcattaacatatatatgaatgtgggtaatgttagaa 97
>46437_miR1436:micropc
Length = 108
Score = 65.9 bits (33), Expect = 8e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtctta 130
||||||||| ||||||||| ||||||||||||||||||| |||||
Sbjct: 44 attcattaatatctatatgtatgtgggcaatgctagaaaatctta 88
Score = 65.9 bits (33), Expect = 8e-12
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaat 67
||||| ||||||||||||||||||| ||||||||| |||||||||
Sbjct: 88 taagattttctagcattgcccacatacatatagatattaatgaat 44
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcat 51
||||||||||||||||||| || ||||||
Sbjct: 21 taagactttctagcattgctcatattcat 49
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 102 atgaatgtgggcaatgctagaaagtctta 130
|||||| || |||||||||||||||||||
Sbjct: 49 atgaatatgagcaatgctagaaagtctta 21
>46775_miR808:micropc
Length = 98
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 58 tagattcattaacatcaatatgaatgtgggaaatgttagaa 98
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatcta 70
||||| |||| ||||||||||||| ||||||||||||||||
Sbjct: 98 ttctaacatttcccacattcatattgatgttaatgaatcta 58
>45913_miR809:micropc
Length = 100
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 59 tagattcattaacatcaatatgaatgtgggaaatgttagaa 99
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatcta 70
||||| |||| ||||||||||||| ||||||||||||||||
Sbjct: 99 ttctaacatttcccacattcatattgatgttaatgaatcta 59
>45522_miR809:micropc
Length = 100
Score = 58.0 bits (29), Expect = 2e-09
Identities = 81/98 (82%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtg----tgtctag 85
|||||||||| |||||||| || |||||||||||||||||||| || | |||||
Sbjct: 2 ttctagcattttccacattcgtaatgatgttaatgaatctagacatatgtatctatctag 61
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||||||| | | ||||||||| |||| |||||
Sbjct: 62 attcattaacatcaacacgaatgtgggaaatgatagaa 99
Score = 50.1 bits (25), Expect = 5e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||||||| || |||||||| ||||||||||
Sbjct: 46 tgtctagattcattaacatcattacgaatgtggaaaatgctagaa 2
