miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 186 bits (94), Expect = 6e-47
Identities = 140/155 (90%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 159 ctactacctccgtttcaagttataagactttctagcattgcccacattcatatatatgtt 100
Query: 61 aatgaatct----agacaagtgtgtctagattcattaacatctatatgaatgtgggcaat 116
||||||||| | | | | |||||||||| |||||||| ||||||||||||||||||
Sbjct: 99 aatgaatcttggcacatatatatgtctagatttattaacatatatatgaatgtgggcaat 40
Query: 117 gctagaaagtcttataacctgaaacggaggaagta 151
|| ||||||||||||||| ||||||||||||||||
Sbjct: 39 gccagaaagtcttataacttgaaacggaggaagta 5
Score = 178 bits (90), Expect = 1e-44
Identities = 139/155 (89%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcaagttataagactttctggcattgcccacattcatatatatgtta 64
Query: 62 atgaatctagacaagt----gtgtctagattcattaacatctatatgaatgtgggcaatg 117
|| |||||||||| | ||| | |||||||||||||| |||||||||||||||||||
Sbjct: 65 ataaatctagacatatatatgtgccaagattcattaacatatatatgaatgtgggcaatg 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagtag 152
||||||||||||||||| ||||||||||| |||||
Sbjct: 125 ctagaaagtcttataacttgaaacggaggtagtag 159
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 184 bits (93), Expect = 2e-46
Identities = 140/156 (89%), Gaps = 6/156 (3%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 62 atgaatctagacaa------gtgtgtctagattcattaacatctatatgaatgtgggcaa 115
||||||||| | | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 65 atgaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggcaa 124
Query: 116 tgctagaaagtcttataacctgaaacggaggaagta 151
|||||||||||||||||| ||||||||||| ||||
Sbjct: 125 tgctagaaagtcttataatatgaaacggagggagta 160
Score = 176 bits (89), Expect = 6e-44
Identities = 139/156 (89%), Gaps = 6/156 (3%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 62 atgaatctagacaag------tgtgtctagattcattaacatctatatgaatgtgggcaa 115
||||||||| ||| | | | |||||||||||||||||||||||||||||||||
Sbjct: 100 atgaatctatacacacacatatatatatagattcattaacatctatatgaatgtgggcaa 41
Query: 116 tgctagaaagtcttataacctgaaacggaggaagta 151
|||||||||||||||||| ||||||||||||||||
Sbjct: 40 tgctagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 178 bits (90), Expect = 1e-44
Identities = 139/155 (89%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtta 64
Query: 62 atgaatctagacaagtgt----gtctagattcattaacatctatatgaatgtgggcaatg 117
||||| ||| ||| | | |||||||||||||| |||||||||||||||||||||||
Sbjct: 65 atgaacctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagtag 152
|||||||||||||||| |||||||||||||||||
Sbjct: 125 ctagaaagtcttataatatgaaacggaggaagtag 159
Score = 178 bits (90), Expect = 1e-44
Identities = 139/155 (89%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 159 ctacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgct 100
Query: 61 aatgaatctagac----aagtgtgtctagattcattaacatctatatgaatgtgggcaat 116
||||||||||||| | ||||| ||| ||||||||||||||||||| ||||||||||
Sbjct: 99 aatgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaat 40
Query: 117 gctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||||||| ||||||||||| ||||
Sbjct: 39 gctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 178 bits (90), Expect = 1e-44
Identities = 140/155 (90%), Gaps = 5/155 (3%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 62 atgaatctagacaagt----gtgtctagattca-ttaacatctatatgaatgtgggcaat 116
||||||||||| | | ||||||||||| | |||||||||||||||||||||| |||
Sbjct: 99 atgaatctagatatatgtaggtgtctagattaatttaacatctatatgaatgtgggtaat 40
Query: 117 gctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||||||| ||||||||||| ||||
Sbjct: 39 gctagaaagtcttataatatgaaacggagggagta 5
Score = 170 bits (86), Expect = 3e-42
Identities = 139/155 (89%), Gaps = 5/155 (3%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatatagatgtta 64
Query: 62 a-tgaatctagacaagtg----tgtctagattcattaacatctatatgaatgtgggcaat 116
| | |||||||||| | | ||||||||||||||||||||||||||||||||||||
Sbjct: 65 aattaatctagacacctacatatatctagattcattaacatctatatgaatgtgggcaat 124
Query: 117 gctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||||||| |||||||||||| ||||
Sbjct: 125 gctagaaagtcttataatctgaaacggagggagta 159
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 161 bits (81), Expect = 3e-39
Identities = 106/114 (92%), Gaps = 4/114 (3%)
Strand = Plus / Plus
Query: 22 ataagactttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgt 81
||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || |||
Sbjct: 1 ataagactttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgt 60
Query: 82 ----ctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 131
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 145 bits (73), Expect = 2e-34
Identities = 104/114 (91%), Gaps = 4/114 (3%)
Strand = Plus / Minus
Query: 22 ataagactttctagcattgcccacattcatatagatgttaatgaatctag----acaagt 77
|||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacacatac 55
Query: 78 gtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 131
||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 54 atgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttat 1
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 161 bits (81), Expect = 3e-39
Identities = 136/154 (88%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 62 atgaatctag----acaagtgtgtctagattcattaacatctatatgaatgtgggcaatg 117
|||||||||| | | ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 65 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||| ||||||||| | ||||||||||| ||||
Sbjct: 125 ctaaaaagtcttacattatgaaacggagggagta 158
Score = 153 bits (77), Expect = 8e-37
Identities = 135/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||| ||||||||| |||||||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 62 atgaatctagacaag----tgtgtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||||||| | | |||||||||||||||||||||||||||||||||||||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| | ||||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 153 bits (77), Expect = 8e-37
Identities = 134/152 (88%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||| ||||||||| | |||||| |||||||||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtta 97
Query: 62 atgaatctagacaa--gtgtgtctagattcattaacatctatatgaatgtgggcaatgct 119
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atgaatctagacatatgtgtgtctagattcattaacatctatatgaatgtgggcaatgct 37
Query: 120 agaaagtcttataacctgaaacggaggaagta 151
|||||| |||| | ||||||||||||||||
Sbjct: 36 agaaagacttacattatgaaacggaggaagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 131/152 (86%), Gaps = 2/152 (1%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 62 atgaatctagacaag--tgtgtctagattcattaacatctatatgaatgtgggcaatgct 119
||||||||||||| | |||||||||||||||||||||| |||||| | ||||||||
Sbjct: 65 atgaatctagacacacatatgtctagattcattaacatctagatgaatataagcaatgct 124
Query: 120 agaaagtcttataacctgaaacggaggaagta 151
| ||||||||| | ||||||||||| ||||
Sbjct: 125 acaaagtcttacattatgaaacggagggagta 156
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 153 bits (77), Expect = 8e-37
Identities = 135/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 62 atgaatctag----acaagtgtgtctagattcattaacatctatatgaatgtgggcaatg 117
|||||||||| | | ||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 98 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatg 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||| ||||||||| | ||||||||||| ||||
Sbjct: 38 ctaaaaagtcttacattatgaaacggagggagta 5
Score = 145 bits (73), Expect = 2e-34
Identities = 134/154 (87%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||| ||||||| | |||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 62 atgaatctagacaag----tgtgtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||||||| | | |||||||||||||||||||||||||||||||||||||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| | ||||||||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 153 bits (77), Expect = 8e-37
Identities = 105/114 (92%), Gaps = 4/114 (3%)
Strand = Plus / Plus
Query: 22 ataagactttctagcattgcccacattcatatagatgttaatgaatctagacaagt---- 77
||||||||||||||||||||||||||||||||| ||||||||||||||||| | |
Sbjct: 1 ataagactttctagcattgcccacattcatatatatgttaatgaatctagatatatatat 60
Query: 78 gtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 131
||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 145 bits (73), Expect = 2e-34
Identities = 104/114 (91%), Gaps = 4/114 (3%)
Strand = Plus / Minus
Query: 22 ataagactttctagcattgcccacattcatatagatgttaatgaatctag----acaagt 77
|||||||||||||||||||||||||||||||||||||||||||||||||| | | |
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacatatat 55
Query: 78 gtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 131
| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 54 atatctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttat 1
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 147 bits (74), Expect = 5e-35
Identities = 134/153 (87%), Gaps = 2/153 (1%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||||||||||||||||| | |||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 62 atgaatctag--acaagtgtgtctagattcattaacatctatatgaatgtgggcaatgct 119
|||||||||| | | | |||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 65 atgaatctaggtatatgcgtgtctagattcattaacatttatatgaatgtggacaatgct 124
Query: 120 agaaagtcttataacctgaaacggaggaagtag 152
||||||||||| | |||||||||||||||||
Sbjct: 125 agaaagtcttacattatgaaacggaggaagtag 157
Score = 131 bits (66), Expect = 3e-30
Identities = 132/153 (86%), Gaps = 2/153 (1%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||||||||||||||||| ||||||||||||| |||||
Sbjct: 157 ctacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtt 98
Query: 61 aatgaatctagacaag--tgtgtctagattcattaacatctatatgaatgtgggcaatgc 118
|||||||||||||| | | | ||||||||||||||||| |||||||| | ||||||||
Sbjct: 97 aatgaatctagacacgcatatacctagattcattaacatcaatatgaatataggcaatgc 38
Query: 119 tagaaagtcttataacctgaaacggaggaagta 151
|||||||||||| | ||||||||||| ||||
Sbjct: 37 tagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 135/155 (87%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||||||||||||||| |||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 62 atgaatctagacaagt----gtgtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||| | | | |||||||||||||||| ||||||| |||||||||||||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagtag 152
||||||||||||| | |||||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagtag 4
Score = 139 bits (70), Expect = 1e-32
Identities = 134/155 (86%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||||||||||||||||||||||||||| ||||||| |
Sbjct: 4 ctacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgct 63
Query: 61 aatgaatctagacaagt----gtgtctagattcattaacatctatatgaatgtgggcaat 116
|||||||||||||| | || | |||||||||||||||||||||||||| |||||||
Sbjct: 64 aatgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaat 123
Query: 117 gctagaaagtcttataacctgaaacggaggaagta 151
|||||||||||||| | ||||||||||| ||||
Sbjct: 124 gctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 135/155 (87%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||| |||||||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 62 atgaatctagacaagt----gtgtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||||||| | |||||||||||||||||||||||||||||| || ||||||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagtag 152
||||||||||||| | ||||||||||| |||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagtag 159
Score = 147 bits (74), Expect = 5e-35
Identities = 135/155 (87%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | ||||||||||||||||||| || |||||||||||||||
Sbjct: 159 ctactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtt 100
Query: 61 aatgaatctagacaagtgt----gtctagattcattaacatctatatgaatgtgggcaat 116
|||||||||||||| | | |||||||||||||||||||||||||||||||||||||
Sbjct: 99 aatgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaat 40
Query: 117 gctagaaagtcttataacctgaaacggaggaagta 151
|||||||| |||| | ||||||||||||||||
Sbjct: 39 actagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 145 bits (73), Expect = 2e-34
Identities = 131/151 (86%), Gaps = 7/151 (4%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||||||||||||||||||| |||||||||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 62 atgaatctagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatgctag 121
|||||||||| |||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 87 atgaatctag-------tgtctagattcattaacatctaagtgaatgtgagcaatgctag 35
Query: 122 aaagtcttataacctgaaacggaggaagtag 152
||||||||| | |||||||||||||||||
Sbjct: 34 aaagtcttacattgtgaaacggaggaagtag 4
Score = 137 bits (69), Expect = 5e-32
Identities = 130/151 (86%), Gaps = 7/151 (4%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | ||||||||||||||||||| |||||||| ||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtt 63
Query: 61 aatgaatctagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatgcta 120
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 64 aatgaatctagaca-------ctagattcattaacatctatatgtatgtgggcaatgcta 116
Query: 121 gaaagtcttataacctgaaacggaggaagta 151
|||||||||| | ||||||||||| ||||
Sbjct: 117 gaaagtcttacattatgaaacggagggagta 147
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 145 bits (73), Expect = 2e-34
Identities = 104/114 (91%), Gaps = 4/114 (3%)
Strand = Plus / Plus
Query: 22 ataagactttctagcattgcccacattcatatagatgttaatgaatctag----acaagt 77
||||||||||||||||||||||| ||||||||| |||||||||||||||| ||| |
Sbjct: 1 ataagactttctagcattgcccatattcatatatatgttaatgaatctaggcatacatat 60
Query: 78 gtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 131
|| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 145 bits (73), Expect = 2e-34
Identities = 104/114 (91%), Gaps = 4/114 (3%)
Strand = Plus / Minus
Query: 22 ataagactttctagcattgcccacattcatatagatgttaatgaatctag----acaagt 77
|||||||||||||||||||||||||||||||||||||||||||||||||| | | ||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgt 55
Query: 78 gtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 131
|| |||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 54 atgcctagattcattaacatatatatgaatatgggcaatgctagaaagtcttat 1
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 135/156 (86%), Gaps = 4/156 (2%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | ||||||||| || ||||||||||||||| |||||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtt 100
Query: 61 aatgaatctagacaa----gtgtgtctagattcattaacatctatatgaatgtgggcaat 116
|||||||||||| | ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 99 aatgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaat 40
Query: 117 gctagaaagtcttataacctgaaacggaggaagtag 152
||||| |||||||| | ||||||||||| |||||
Sbjct: 39 gctaggaagtcttacattgtgaaacggagggagtag 4
Score = 125 bits (63), Expect = 2e-28
Identities = 133/156 (85%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||||||| |||||||||| ||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtt 63
Query: 61 aatgaatctag----acaagtgtgtctagattcattaacatctatatgaatgtgggcaat 116
||||||||||| ||| | | ||||||||||||||||||||| ||||||||||||||
Sbjct: 64 aatgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaat 123
Query: 117 gctagaaagtcttataacctgaaacggaggaagtag 152
| || ||||||||| | ||||||||||| |||||
Sbjct: 124 gttaaaaagtcttacattgtgaaacggagggagtag 159
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 134/155 (86%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||||||||||||||||||| |||||| |||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 62 atgaatctagacaagtgt----gtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||||||| ||| || ||||||||||||||| |||||| ||||||||||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatg 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagtag 152
||||||||||||| | |||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagtag 4
Score = 123 bits (62), Expect = 7e-28
Identities = 132/155 (85%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | ||||||||||||||||||||||||| |||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtt 63
Query: 61 aatgaatctagac----aagtgtgtctagattcattaacatctatatgaatgtgggcaat 116
|||||||||| || | | ||||||||||||||| |||||| |||||| ||||||||
Sbjct: 64 aatgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaat 123
Query: 117 gctagaaagtcttataacctgaaacggaggaagta 151
|||||||||||||| | ||||||||||| ||||
Sbjct: 124 gctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 133/154 (86%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| ||||||||||||||| ||||||||||||||||||| |||| |
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtca 64
Query: 62 atgaatctagac----aagtgtgtctagattcattaacatctatatgaatgtgggcaatg 117
|||||||||||| | ||||| |||||||||| ||||||||||||| ||| ||||
Sbjct: 65 atgaatctagacatatatatgtgtttagattcattgacatctatatgaagatggacaatt 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
|||||||||||||||| ||||||||||| ||||
Sbjct: 125 ctagaaagtcttataatatgaaacggagggagta 158
Score = 137 bits (69), Expect = 5e-32
Identities = 133/154 (86%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||||||||||||| |||| ||| ||||||||||||| |
Sbjct: 158 tactccctccgtttcatattataagactttctagaattgtccatcttcatatagatgtca 99
Query: 62 atgaatctagacaagtgt----gtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||| ||| | | ||||||||||||| |||| |||||||||||||||||||
Sbjct: 98 atgaatctaaacacatatatatgtctagattcattgacatatatatgaatgtgggcaatg 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||||| ||||||||||||||||
Sbjct: 38 ttagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 133/154 (86%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||||||| | |||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 62 atgaatctagacaag----tgtgtctagattcattaacatctatatgaatgtgggcaatg 117
|||||| |||||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaata 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| | ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 137 bits (69), Expect = 5e-32
Identities = 133/154 (86%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||||||| |||||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 62 atgaatctagac----aagtgtgtctagattcattaacatctatatgaatgtgggcaatg 117
|||||||||||| | | ||||||| |||||||||||||||||||||| |||||| |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| | ||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 133/154 (86%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||||||||||||||| | ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtta 64
Query: 62 atgaatctagacaa----gtgtgtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||||||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 65 atgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaac 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| | ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
Score = 129 bits (65), Expect = 1e-29
Identities = 132/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||||||| ||| ||||||||||||||||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 62 atgaatctagacaag----tgtgtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||| ||| | ||||||||||||||||||||||||||||||| | |||||
Sbjct: 98 atgaatctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatg 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| | ||||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 137 bits (69), Expect = 5e-32
Identities = 134/156 (85%), Gaps = 11/156 (7%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| |||| |||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5 tactccctctgtttcatattataagactttctagaattgcccacattcatatagatgtta 64
Query: 62 atgaatctagac------aagtgtgtctagattcattaacatctatatgaatgtgggcaa 115
||||||||| || | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 65 atgaatctatacacacatatgtgtgtatagattcattaacatctatatgaatgtgggcaa 124
Query: 116 tgctagaaagtcttataacctgaaacggaggaagta 151
| ||||||||||| ||||||||||||||||
Sbjct: 125 t-----taagtcttataatatgaaacggaggaagta 155
Score = 131 bits (66), Expect = 3e-30
Identities = 107/121 (88%), Gaps = 6/121 (4%)
Strand = Plus / Minus
Query: 37 attgcccacattcatatagatgttaatgaatctagacaa------gtgtgtctagattca 90
|||||||||||||||||||||||||||||||||| ||| |||||| ||||||||
Sbjct: 125 attgcccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattca 66
Query: 91 ttaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagt 150
|||||||||||||||||||||||||| |||||||||||||||| |||||| |||| |||
Sbjct: 65 ttaacatctatatgaatgtgggcaattctagaaagtcttataatatgaaacagagggagt 6
Query: 151 a 151
|
Sbjct: 5 a 5
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 117/133 (87%), Gaps = 4/133 (3%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctagacaa----gtg 78
||||||||| ||||||||||||||||||||||||| | |||||||||| ||| |||
Sbjct: 137 taagactttttagcattgcccacattcatatagatatcaatgaatctaaacatatatgtg 78
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
||||||||||||||||||| ||||||||||||||||| |||||||||||||| | |||
Sbjct: 77 tgtctagattcattaacatatatatgaatgtgggcaaggctagaaagtcttacattatga 18
Query: 139 aacggaggaagta 151
||| |||||||||
Sbjct: 17 aaccgaggaagta 5
Score = 117 bits (59), Expect = 5e-26
Identities = 99/112 (88%), Gaps = 4/112 (3%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctag----acaagtg 78
|||||||||||||| ||||||||||||||||| |||||||||||||||| ||| |
Sbjct: 26 taagactttctagccttgcccacattcatatatatgttaatgaatctagacacacatata 85
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 130
||| |||||||||| | ||||||||||||||||||||||||| |||||||||
Sbjct: 86 tgtttagattcattgatatctatatgaatgtgggcaatgctaaaaagtctta 137
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 133 bits (67), Expect = 8e-31
Identities = 130/151 (86%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||| |||| |||||||||||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 62 atgaatctagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatgctag 121
||||||||||||| ||| | ||||||||||||||||| |||| ||||||| | |||||
Sbjct: 65 atgaatctagacatatgtatttagattcattaacatctttatgtatgtgggtagtgctaa 124
Query: 122 aaagtcttataacctgaaacggaggaagtag 152
||||||||||| ||||||||||| |||||
Sbjct: 125 aaagtcttatattgtgaaacggagggagtag 155
Score = 133 bits (67), Expect = 8e-31
Identities = 130/151 (86%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| ||||||||||| ||||| | ||||||| |||| |||||||
Sbjct: 155 ctactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtt 96
Query: 61 aatgaatctagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatgcta 120
|||||||||| | | | |||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 95 aatgaatctaaatacatatgtctagattcattaacatctaaatgaatgtgggcaacgcta 36
Query: 121 gaaagtcttataacctgaaacggaggaagta 151
||||||||| | ||||||||||||||||
Sbjct: 35 caaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 132/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||| ||| |||| ||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 62 atgaatctagacaagtgtgt----ctagattcattaacatctatatgaatgtgggcaatg 117
||||||||||||| ||| | |||| ||||||||||||||||||||| ||||||||
Sbjct: 98 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||||| ||||||||||| ||||
Sbjct: 38 ctagaaagtcttatattatgaaacggagggagta 5
Score = 121 bits (61), Expect = 3e-27
Identities = 131/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| ||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 62 atgaatctag----acaagtgtgtctagattcattaacatctatatgaatgtgggcaatg 117
||||| |||| | | | ||||||||||||||||||||||||||||||||| ||||
Sbjct: 65 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||| ||||||||| | ||||||||||| ||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 132/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||||||| | |||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 62 atgaatctagacaag----tgtgtctagattcattaacatctatatgaatgtgggcaatg 117
|||||| |||||| | | ||||||||||||||||||||||||||||| ||||||||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaata 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| | ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 129 bits (65), Expect = 1e-29
Identities = 132/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||||||| |||||||| ||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 62 atgaatctagac----aagtgtgtctagattcattaacatctatatgaatgtgggcaatg 117
|||||||||||| | | ||||||| |||||||||||||||||||||| |||||| |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| | ||||||||||| ||||
Sbjct: 38 ctagaaagtcttacatggtgaaacggagggagta 5
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 132/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||| ||| |||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 62 atgaatctagacaagtgtgt----ctagattcattaacatctatatgaatgtgggcaatg 117
||||||||||||| ||| | |||| ||||||||||||||||||||| ||||||||
Sbjct: 65 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||||| ||||||||||| ||||
Sbjct: 125 ctagaaagtcttatattatgaaacggagggagta 158
Score = 121 bits (61), Expect = 3e-27
Identities = 131/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| ||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 62 atgaatctag----acaagtgtgtctagattcattaacatctatatgaatgtgggcaatg 117
||||| |||| | | | ||||||||||||||||||||||||||||||||| ||||
Sbjct: 98 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||| ||||||||| | ||||||||||| ||||
Sbjct: 38 ctaaaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 129 bits (65), Expect = 1e-29
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 54 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatga 113
Query: 139 aacggaggaagta 151
|||||||||||||
Sbjct: 114 aacggaggaagta 126
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 67
Query: 62 atgaatctagaca 74
|||||||||||||
Sbjct: 66 atgaatctagaca 54
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcat 51
|||| ||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagattttctagcattgcccacattcat 54
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 102 atgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 54 atgaatgtgggcaatgctagaaaatcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 116/133 (87%), Gaps = 4/133 (3%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctagacaa----gtg 78
|||||||||||||| ||||||||||| |||||||| ||||||||||||||| |||
Sbjct: 26 taagactttctagcgttgcccacatttatatagatactaatgaatctagacatatatgtg 85
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|| |||||||||||| ||| |||||||||||||||||||||||||||||||| | |||
Sbjct: 86 tgcctagattcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatga 145
Query: 139 aacggaggaagta 151
|||||||| ||||
Sbjct: 146 aacggagggagta 158
Score = 121 bits (61), Expect = 3e-27
Identities = 131/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||||||||||||||||||||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 62 atgaatctag----acaagtgtgtctagattcattaacatctatatgaatgtgggcaatg 117
|||||||||| ||| | ||||||||||||||| |||||||| ||||||||||| |
Sbjct: 98 atgaatctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaacg 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| | |||||| |||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacagaggaagta 5
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 125 bits (63), Expect = 2e-28
Identities = 100/112 (89%), Gaps = 4/112 (3%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctagacaa----gtg 78
|||||||||||| ||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 116 taagactttctaacattgcccacattcatatagatgcaaatgaatctagacatatatgtg 57
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 130
|| |||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 56 tgcctagattcattagcatagatatgaatgtgggcaatgctagaaagtctta 5
Score = 117 bits (59), Expect = 5e-26
Identities = 99/112 (88%), Gaps = 4/112 (3%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctag----acaagtg 78
||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |
Sbjct: 5 taagactttctagcattgcccacattcatatctatgctaatgaatctaggcacacatata 64
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 130
|||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 65 tgtctagattcatttgcatctatatgaatgtgggcaatgttagaaagtctta 116
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 125 bits (63), Expect = 2e-28
Identities = 129/150 (86%), Gaps = 2/150 (1%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| |||||| | |||||| ||||||||||||| ||||||| |
Sbjct: 157 ctactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatact 98
Query: 61 aatgaatctag--acaagtgtgtctagattcattaacatctatatgaatgtgggcaatgc 118
||||||||||| ||| | |||| |||||||||||||||||||||||||||||||||||
Sbjct: 97 aatgaatctagccacatatatgtccagattcattaacatctatatgaatgtgggcaatgc 38
Query: 119 tagaaagtcttataacctgaaacggaggaa 148
||||| | |||||| |||||||||||||
Sbjct: 37 tagaatgacttatattatgaaacggaggaa 8
Score = 121 bits (61), Expect = 3e-27
Identities = 127/148 (85%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 7 cctccgtttcaggttataagactttctagcattgcccacattcatatagatgttaatgaa 66
||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 67 tctagac--aagtgtgtctagattcattaacatctatatgaatgtgggcaatgctagaaa 124
||| ||| | |||| |||||||||||| ||||||| ||||||||||||| ||||||
Sbjct: 70 tctggacatatatgtggctagattcattagtatctataagaatgtgggcaatcctagaat 129
Query: 125 gtcttataacctgaaacggaggaagtag 152
| |||||| ||||||||||| |||||
Sbjct: 130 gacttatattgtgaaacggagggagtag 157
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 125 bits (63), Expect = 2e-28
Identities = 100/112 (89%), Gaps = 4/112 (3%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctagacaagt----g 78
|||||||||||||||| | ||||||||||||||||| |||||||||||||| | |
Sbjct: 113 taagactttctagcatcacacacattcatatagatgtaaatgaatctagacatatatatg 54
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 130
|||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 53 tgtctagattcattaacatctatatgaatgtgggtgatgctagaaagtctta 2
Score = 117 bits (59), Expect = 5e-26
Identities = 99/112 (88%), Gaps = 4/112 (3%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctagac----aagtg 78
|||||||||||||||| ||||||||||||||||||||||||||||||||| | |
Sbjct: 2 taagactttctagcatcacccacattcatatagatgttaatgaatctagacacatatata 61
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 130
|||||||||||||| ||||||||||||||||| | ||||||||||||||||
Sbjct: 62 tgtctagattcatttacatctatatgaatgtgtgtgatgctagaaagtctta 113
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 123 bits (62), Expect = 7e-28
Identities = 80/86 (93%)
Strand = Plus / Plus
Query: 36 cattgcccacattcatatagatgttaatgaatctagacaagtgtgtctagattcattaac 95
||||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||
Sbjct: 5 cattgcccacattcatatatatgttaatgaatctagacatatatatctagattcattaac 64
Query: 96 atctatatgaatgtgggcaatgctag 121
|| |||||||||||||||||||||||
Sbjct: 65 atatatatgaatgtgggcaatgctag 90
Score = 123 bits (62), Expect = 7e-28
Identities = 80/86 (93%)
Strand = Plus / Minus
Query: 32 ctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgtctagattcat 91
||||||||||||||||||||||| ||||||||||||||||| | | |||||||||||||
Sbjct: 90 ctagcattgcccacattcatatatatgttaatgaatctagatatatatgtctagattcat 31
Query: 92 taacatctatatgaatgtgggcaatg 117
|||||| |||||||||||||||||||
Sbjct: 30 taacatatatatgaatgtgggcaatg 5
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 131/154 (85%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||||||||||| ||||||||||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 62 atgaatctagacaagtg----tgtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||||||| ||| | | |||||||||||||||||||||| || ||| |||||
Sbjct: 65 atgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatg 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| | ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 113 bits (57), Expect = 7e-25
Identities = 130/154 (84%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||||||||||||||| ||| || |||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 62 atgaatctagacaagtg----tgtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||| | | | |||||||||||||||||| ||| ||||||||||| ||||
Sbjct: 98 atgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatg 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| | ||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 119 bits (60), Expect = 1e-26
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 76 gtgtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacc 135
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 gtgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataata 116
Query: 136 tgaaacggaggaagta 151
|||||| |||||||||
Sbjct: 117 tgaaactgaggaagta 132
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 62 atgaatcta 70
|||||||||
Sbjct: 72 atgaatcta 64
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 103 tgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagtag 152
||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagtag 4
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 119 bits (60), Expect = 1e-26
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 76 gtgtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacc 135
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 gtgtgtttagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataata 116
Query: 136 tgaaacggaggaagta 151
|||||| |||||||||
Sbjct: 117 tgaaactgaggaagta 132
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgtta 73
Query: 62 atgaatcta 70
|||||||||
Sbjct: 72 atgaatcta 64
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattca 50
||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcatattataagactttctagcattgcccacattca 53
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 103 tgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagtag 152
||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagtag 4
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 119 bits (60), Expect = 1e-26
Identities = 129/152 (84%), Gaps = 5/152 (3%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| ||||||||||||| ||||||
Sbjct: 150 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 91
Query: 61 aatgaatctagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatgcta 120
|||||||||||| |||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 90 aatgaatctagaa-----tgtctagattcattaacatcaatatgaatgtgggaaatgcta 36
Query: 121 gaaagtcttataacctgaaacggaggaagtag 152
||| | |||| | |||||||||||||||||
Sbjct: 35 gaatgacttacattgtgaaacggaggaagtag 4
Score = 111 bits (56), Expect = 3e-24
Identities = 128/152 (84%), Gaps = 5/152 (3%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| ||||||||||||| ||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 61 aatgaatctagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatgcta 120
|||||||||||||| |||||||||||||||||| ||||||||||||| |||||||
Sbjct: 64 aatgaatctagaca-----ttctagattcattaacatcaatatgaatgtgggaaatgcta 118
Query: 121 gaaagtcttataacctgaaacggaggaagtag 152
||| | |||| | ||||||||||| |||||
Sbjct: 119 gaatgacttacattgtgaaacggagggagtag 150
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 110/127 (86%), Gaps = 4/127 (3%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||||||||||| ||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtt 63
Query: 61 aatgaatctagacaa----gtgtgtctagattcattaacatctatatgaatgtgggcaat 116
||||||| |||| | |||||||||||||||||||||||||||||||| |||| |||
Sbjct: 64 aatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaat 123
Query: 117 gctagaa 123
|||||||
Sbjct: 124 gctagaa 130
Score = 107 bits (54), Expect = 4e-23
Identities = 109/127 (85%), Gaps = 4/127 (3%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaag----tgtgtctag 85
|||||||||| |||| ||||||||||||||||||||||||||||| | | ||||
Sbjct: 130 ttctagcattacccatattcatatagatgttaatgaatctagacacacatctatatctaa 71
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggag 145
||||||||||||||||||| |||||||||||||||||| | |||| | ||||||||||
Sbjct: 70 attcattaacatctatatgtatgtgggcaatgctagaatgacttacattatgaaacggag 11
Query: 146 gaagtag 152
|||||||
Sbjct: 10 gaagtag 4
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 82 ctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaac 141
|||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 74 ctagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaac 15
Query: 142 ggaggaagta 151
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 107 bits (54), Expect = 4e-23
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 62 atgaatctag 71
| ||||||||
Sbjct: 65 acgaatctag 74
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 99 tatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||||||||||||||||||||||||| |||||| ||||| ||||
Sbjct: 82 tatatgaatgtgggcaatgctagaaagtcttataatctgaaatggaggtagta 134
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 131/155 (84%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||||||||||||| || || |||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 62 atgaatctagacaagtg----tgtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||| ||| | |||||||||||||||||||||| |||||| |||||||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagtag 152
||| ||||||||| | |||||||||||||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggaggaagtag 159
Score = 115 bits (58), Expect = 2e-25
Identities = 131/155 (84%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | ||||||||| |||||||||||| |||||| ||||||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtt 100
Query: 61 aatgaatctagaca----agtgtgtctagattcattaacatctatatgaatgtgggcaat 116
|||||||||||||| ||||| ||||||||||||| |||||||| || || |||||
Sbjct: 99 aatgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaat 40
Query: 117 gctagaaagtcttataacctgaaacggaggaagta 151
|||||||||||||| | ||||||||||| ||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 113 bits (57), Expect = 7e-25
Identities = 97/112 (86%), Gaps = 10/112 (8%)
Strand = Plus / Plus
Query: 26 gactttctagcattgcccacattcatatagatgttaatgaatctagaca----------a 75
|||||||||||||||||||||||||||| |||||||||||||||||| | |
Sbjct: 1 gactttctagcattgcccacattcatatggatgttaatgaatctagatatatggatatta 60
Query: 76 gtgtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtc 127
|||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 61 atgtgtctagattcattaacatccatatgaatgtgggcaatgttagaaagtc 112
Score = 97.6 bits (49), Expect = 4e-20
Identities = 95/112 (84%), Gaps = 10/112 (8%)
Strand = Plus / Minus
Query: 26 gactttctagcattgcccacattcatatagatgttaatgaatctagacaagtg------- 78
||||||||| |||||||||||||||||| |||||||||||||||||||| |
Sbjct: 112 gactttctaacattgcccacattcatatggatgttaatgaatctagacacattaatatcc 53
Query: 79 ---tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtc 127
| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 52 atatatctagattcattaacatccatatgaatgtgggcaatgctagaaagtc 1
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 130/154 (84%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||||||||| ||||||||||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 62 atgaatctagaca----agtgtgtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||||||| | | | |||||| |||| |||||||||||||||||| ||||
Sbjct: 98 atgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaatg 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||| ||||||||| | ||||||||||||||||
Sbjct: 38 ctataaagtcttacattatgaaacggaggaagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 129/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||| ||||||| |||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 62 atgaatctagacaagtg----tgtctagattcattaacatctatatgaatgtgggcaatg 117
|| |||||| | | | ||||||||||||||| |||||||||||||||||||||||
Sbjct: 65 ataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
|||||||||||| | ||||||||||| ||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 130/154 (84%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||||||||||||||||||| |||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 62 atgaatctagaca----agtgtgtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||||||| ||| | |||||||||||||||| ||||| | |||||||||
Sbjct: 65 atgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaata 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| | ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 113 bits (57), Expect = 7e-25
Identities = 130/154 (84%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||||||| ||||||||| | ||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 62 atgaatctagacaagtg----tgtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||| | | | |||||||||||||||||||||| |||||| |||||||||
Sbjct: 98 atgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| | ||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 130/154 (84%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||||||||| || ||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcactgtttacattcatatagatgtta 64
Query: 62 atgaatctagacaagt----gtgtctagattcattaacatctatatgaatgtgggcaatg 117
||| ||||| ||| | ||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 65 atggatctatacacttacatgtgtctagattcattgacatctatgtgaacgtgggcaatg 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||||| |||| |||||||||||
Sbjct: 125 ctagaaagtcttatattatgaagcggaggaagta 158
Score = 107 bits (54), Expect = 4e-23
Identities = 115/135 (85%), Gaps = 4/135 (2%)
Strand = Plus / Minus
Query: 21 tataagactttctagcattgcccacattcatatagatgttaatgaatctagacaagt--- 77
||||||||||||||||||||||||| |||| |||||||| |||||||||||||| |
Sbjct: 139 tataagactttctagcattgcccacgttcacatagatgtcaatgaatctagacacatgta 80
Query: 78 -gtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacct 136
|||| ||||| ||||||||||||||||||||| || ||||||||||||||| | |
Sbjct: 79 agtgtatagatccattaacatctatatgaatgtaaacagtgctagaaagtcttacattat 20
Query: 137 gaaacggaggaagta 151
|||||||||| ||||
Sbjct: 19 gaaacggagggagta 5
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 114/133 (85%), Gaps = 4/133 (3%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctagacaagtgt--- 79
||||||||| || |||||| |||||||| ||||||||||||||| |||||| |||
Sbjct: 26 taagactttttaatattgcctacattcatttagatgttaatgaatatagacatatgtacg 85
Query: 80 -gtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|| |||||||||||||||||||||| ||||| ||||||||||||||||||| | |||
Sbjct: 86 tgtttagattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtga 145
Query: 139 aacggaggaagta 151
|||||||||||||
Sbjct: 146 aacggaggaagta 158
Score = 105 bits (53), Expect = 2e-22
Identities = 129/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||||||||||||| ||||| |||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 62 atgaatctagacaag----tgtgtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||| ||| | | |||||| ||||||||||||||| |||||||| ||||||
Sbjct: 98 atgaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggcaata 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
|| ||||||||| | | ||||||||||||||
Sbjct: 38 ttaaaaagtcttacattgtaaaacggaggaagta 5
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 111 bits (56), Expect = 3e-24
Identities = 126/150 (84%), Gaps = 12/150 (8%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtg- 84
Query: 62 atgaatctagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatgctag 121
||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 83 -----tct------gtgtgtctaaattcattaacatctatatgaatgtgggcaatgctag 35
Query: 122 aaagtcttataacctgaaacggaggaagta 151
||||||||| | ||||||||||| ||||
Sbjct: 34 aaagtcttacattatgaaacggagggagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 62 atgaatctagaca 74
|||||| ||||||
Sbjct: 65 atgaatttagaca 77
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 111 bits (56), Expect = 3e-24
Identities = 128/151 (84%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| |||||| | |||||||||| || |||||||||| |||| |
Sbjct: 153 ctactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgct 94
Query: 61 aatgaatctagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatgcta 120
|||||||||||||| | | ||||||||||||| |||| ||||||||||||| |||||||
Sbjct: 93 aatgaatctagaca--tatatctagattcattagcatcaatatgaatgtgggaaatgcta 36
Query: 121 gaaagtcttataacctgaaacggaggaagta 151
||| | |||| | ||||||||||||||||
Sbjct: 35 gaatgacttacattgtgaaacggaggaagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 106/123 (86%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgtctagattc 89
|||||||||| ||||||||||||| |||| ||||||||||||| | | |||||||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgctaatgaatctagata--tatgtctagattc 90
Query: 90 attaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaag 149
|||| |||| |||||||||| || |||||||||| | |||||| ||||||||||| ||
Sbjct: 91 attagcatcaatatgaatgtaggaaatgctagaatgacttatattgtgaaacggagggag 150
Query: 150 tag 152
|||
Sbjct: 151 tag 153
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 109 bits (55), Expect = 1e-23
Identities = 108/125 (86%), Gaps = 3/125 (2%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgt---ctaga 86
|||||||||| ||||||||||||| |||||||||||||||| ||| ||| | |||||
Sbjct: 129 ttctagcatttcccacattcatattgatgttaatgaatctaaacatatgtatgtgctaga 70
Query: 87 ttcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggagg 146
|||||||||||| ||||||||||||| |||||||||| | |||| | |||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Query: 147 aagta 151
|||||
Sbjct: 9 aagta 5
Score = 93.7 bits (47), Expect = 7e-19
Identities = 85/97 (87%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctag---acaagtgtgtctaga 86
|||||||||| ||||||||||||| ||||||||||||||||| | | | ||| ||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctagcacatacatatgtttaga 92
Query: 87 ttcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||| ||||||||||||| ||||||||||
Sbjct: 93 ttcattaacatcaatatgaatgtgggaaatgctagaa 129
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 85 gattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacgga 144
||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||
Sbjct: 73 gattcattaacatctatatgaatgtggacagtgctagaaagtcttatagcctgaaacgga 132
Query: 145 ggaagta 151
|||||||
Sbjct: 133 ggaagta 139
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||
Sbjct: 139 tacttcctccgtttcaggctataagactttctagcactgtccacattcatatagatgtta 80
Query: 62 atgaatc 68
|||||||
Sbjct: 79 atgaatc 73
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 109 bits (55), Expect = 1e-23
Identities = 124/150 (82%), Gaps = 14/150 (9%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 62 atgaatctagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatgctag 121
||||||||| ||| ||||||||||||||||||||| |||||||||||
Sbjct: 80 atgaatctataca--------------cattaacatctatatgaatgtaggcaatgctag 35
Query: 122 aaagtcttataacctgaaacggaggaagta 151
||||||||| | ||||||||| ||||||
Sbjct: 34 aaagtcttacattatgaaacggaagaagta 5
Score = 107 bits (54), Expect = 4e-23
Identities = 108/129 (83%), Gaps = 14/129 (10%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgtc 82
|||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 26 taagactttctagcattgcctacattcatatagatgttaatg--------------tgta 71
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacg 142
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 143 gaggaagta 151
|||| ||||
Sbjct: 132 gagggagta 140
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |||
Sbjct: 4 ctactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtt 63
Query: 61 aatgaatctagaca 74
||||||||||||||
Sbjct: 64 aatgaatctagaca 77
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||
Sbjct: 77 tgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatga 18
Query: 139 aacggaggaagtag 152
|||||||| |||||
Sbjct: 17 aacggagggagtag 4
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 113 caatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||||||||||| ||||| ||||||||||
Sbjct: 90 caatgctagaaagtcttataatatgaaaaggaggaagta 128
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattg 40
|||| ||||| ||||| |||||||||||||||||||||
Sbjct: 128 tacttcctccttttcatattataagactttctagcattg 90
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||
Sbjct: 56 tgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatga 115
Query: 139 aacggaggaagtag 152
|||||||| |||||
Sbjct: 116 aacggagggagtag 129
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |||
Sbjct: 129 ctactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtt 70
Query: 61 aatgaatctagaca 74
||||||||||||||
Sbjct: 69 aatgaatctagaca 56
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 113 caatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||||||||||| ||||| ||||||||||
Sbjct: 43 caatgctagaaagtcttataatatgaaaaggaggaagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattg 40
|||| ||||| ||||| |||||||||||||||||||||
Sbjct: 5 tacttcctccttttcatattataagactttctagcattg 43
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 107 bits (54), Expect = 4e-23
Identities = 123/150 (82%), Gaps = 17/150 (11%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgtccacattcacatagatgtta 64
Query: 62 atgaatctagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatgctag 121
|| |||||||||| ||||||||||||||||||| |||||||||
Sbjct: 65 ataaatctagaca-----------------caacatctatatgaatgtggacaatgctag 107
Query: 122 aaagtcttataacctgaaacggaggaagta 151
|||||||||||| ||||||||||||||||
Sbjct: 108 aaagtcttataatatgaaacggaggaagta 137
Score = 107 bits (54), Expect = 4e-23
Identities = 123/150 (82%), Gaps = 17/150 (11%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 137 tacttcctccgtttcatattataagactttctagcattgtccacattcatatagatgtt- 79
Query: 62 atgaatctagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatgctag 121
||||||||||| |||||||||||| ||||||||| |||||||||
Sbjct: 78 ----------------gtgtctagatttattaacatctatgtgaatgtggacaatgctag 35
Query: 122 aaagtcttataacctgaaacggaggaagta 151
|||||||||||| ||||||||||| ||||
Sbjct: 34 aaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||
Sbjct: 60 tgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataatttga 119
Query: 139 aacggaggaagtag 152
|||||||| |||||
Sbjct: 120 aacggagggagtag 133
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 133 ctactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtt 74
Query: 61 aatgaatctagaca 74
||||||||||||||
Sbjct: 73 aatgaatctagaca 60
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 62 tgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtga 121
Query: 139 aacggaggaagtag 152
||||||||||||||
Sbjct: 122 aacggaggaagtag 135
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ctacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtt 76
Query: 61 aatgaatctagaca 74
||| ||||||||||
Sbjct: 75 aataaatctagaca 62
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 132/156 (84%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | ||||||||||||| | |||||||||||||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtt 63
Query: 61 aatgaatctagaca-ag---tgtgtctagattcattaacatctatatgaatgtgggcaat 116
|||||||||||||| || | | |||||||||||||||||| ||||||||||| ||| |
Sbjct: 64 aatgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcatt 123
Query: 117 gctagaaagtcttataacctgaaacggaggaagtag 152
||||||| | |||| | |||||||||||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggaggaagtag 159
Score = 101 bits (51), Expect = 3e-21
Identities = 130/156 (83%), Gaps = 4/156 (2%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||| ||| ||||||||||| ||||||
Sbjct: 159 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 100
Query: 61 aatgaatctagacaagtgt----gtctagattcattaacatctatatgaatgtgggcaat 116
|||||||||||| | ||| |||||||||||||||||||||||||||| | ||||||
Sbjct: 99 aatgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaat 40
Query: 117 gctagaaagtcttataacctgaaacggaggaagtag 152
||||||| | |||| | ||||||||||| |||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggagtag 4
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 66 tgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataatatga 125
Query: 139 aacggaggaagta 151
|||||||| ||||
Sbjct: 126 aacggagggagta 138
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 79
Query: 62 atgaatctagaca 74
|||||||||||||
Sbjct: 78 atgaatctagaca 66
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 139 aacggaggaagta 151
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 62 atgaatctagaca 74
|||||||||||||
Sbjct: 65 atgaatctagaca 77
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 87/98 (88%), Gaps = 4/98 (4%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaa----gtgtgtctag 85
|||||||||||||||||| |||||||||||||||||| |||| | ||||||||||
Sbjct: 130 ttctagcattgcccacatatatatagatgttaatgaatttagatatagatgtgtgtctag 71
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||||||||||| || ||||||||||
Sbjct: 70 attcattaacatctatatgaatgttggtaatgctagaa 33
Score = 97.6 bits (49), Expect = 4e-20
Identities = 107/126 (84%), Gaps = 4/126 (3%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctag----acaagtgtgtctag 85
|||||||||| || |||||||||||||||||||||||||||| ||| | | ||||
Sbjct: 33 ttctagcattaccaacattcatatagatgttaatgaatctagacacacatctatatctaa 92
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggag 145
|||||||||||||||||| |||||||||||||||||| | |||| | ||||||||||
Sbjct: 93 attcattaacatctatatatatgtgggcaatgctagaatgacttacattatgaaacggag 152
Query: 146 gaagta 151
||||||
Sbjct: 153 gaagta 158
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 105 bits (53), Expect = 2e-22
Identities = 107/124 (86%), Gaps = 2/124 (1%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaag--tgtgtctagat 87
|||||||||| ||||||||||||| |||||||||||||||||| | | | |||| ||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctagataggcatatgtccagat 92
Query: 88 tcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggagga 147
||||||||||| |||| || ||||| |||||||||| | |||||| ||||||||||||
Sbjct: 93 tcattaacatcaatataaacgtgggaaatgctagaatgacttatattgtgaaacggagga 152
Query: 148 agta 151
||||
Sbjct: 153 agta 156
Score = 97.6 bits (49), Expect = 4e-20
Identities = 106/124 (85%), Gaps = 2/124 (1%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | |||||||||| ||||| || |||| |||||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 62 atgaatctagacaagtg--tgtctagattcattaacatctatatgaatgtgggcaatgct 119
|||||||| |||| || | |||||||||||||||||| ||||||||||||| ||||||
Sbjct: 96 atgaatctggacatatgcctatctagattcattaacatcaatatgaatgtgggaaatgct 37
Query: 120 agaa 123
||||
Sbjct: 36 agaa 33
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||
Sbjct: 63 tgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttataatatga 122
Query: 139 aacggaggaagta 151
||| |||||||||
Sbjct: 123 aacagaggaagta 135
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| |||| |||||| ||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 135 tacttcctctgtttcatattataagactttctagcattgtccacattcatatatatgtta 76
Query: 62 atgaatctagacaa 75
||||||||||||||
Sbjct: 75 atgaatctagacaa 62
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 103 bits (52), Expect = 7e-22
Identities = 127/151 (84%), Gaps = 2/151 (1%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| ||||||||||||| |||||
Sbjct: 153 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtc 94
Query: 61 aatgaatctagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatgcta 120
|||||||||||||| |||||||||||||| ||||| ||||||||||||| |||| ||
Sbjct: 93 aatgaatctagaca--gatgtctagattcattgacatcaatatgaatgtgggaaatgata 36
Query: 121 gaaagtcttataacctgaaacggaggaagta 151
||| | |||| | ||||||||||||||||
Sbjct: 35 gaatgacttacattgtgaaacggaggaagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 106/123 (86%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgtctagattc 89
||||| |||| ||||||||||||| ||||| |||||||||||||| | |||||||||||
Sbjct: 33 ttctatcatttcccacattcatattgatgtcaatgaatctagaca--tctgtctagattc 90
Query: 90 attaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaag 149
||| ||||| ||||||||||||| |||||||||| | |||| | ||||||||||| ||
Sbjct: 91 attgacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggag 150
Query: 150 tag 152
|||
Sbjct: 151 tag 153
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 131/156 (83%), Gaps = 4/156 (2%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | ||||||||||||| | |||||||||||||||
Sbjct: 159 ctactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtt 100
Query: 61 aatgaatctagaca-ag---tgtgtctagattcattaacatctatatgaatgtgggcaat 116
|||||||||||| | || | | |||||||||||||||||| ||||||||||| ||| |
Sbjct: 99 aatgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcatt 40
Query: 117 gctagaaagtcttataacctgaaacggaggaagtag 152
||||||| | |||| | |||||||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggaggaagtag 4
Score = 93.7 bits (47), Expect = 7e-19
Identities = 129/156 (82%), Gaps = 4/156 (2%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||| ||| ||||||||||| ||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 63
Query: 61 aatgaatctagacaagtgtgt----ctagattcattaacatctatatgaatgtgggcaat 116
|||||||||||| | ||| | |||||||||||||||||||||||||| | ||||||
Sbjct: 64 aatgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaat 123
Query: 117 gctagaaagtcttataacctgaaacggaggaagtag 152
||||||| | |||| | ||||||||||| |||||
Sbjct: 124 gctagaatgacttacattatgaaacggagggagtag 159
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/155 (83%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||||||||||| ||||||| | | | |||||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagactttctaacattgcctatgtacccatagatgtt 100
Query: 61 aatgaatctagacaagt----gtgtctagattcattaacatctatatgaatgtgggcaat 116
|||||||||||||| | |||| |||||||||||||||||| ||||||||||| |||
Sbjct: 99 aatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgggtaat 40
Query: 117 gctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| | ||||||||||||||||
Sbjct: 39 gctagaaagtcttgcattatgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 111/133 (83%), Gaps = 4/133 (3%)
Strand = Plus / Plus
Query: 24 aagactttctagcattgcccacattcatatagatgttaatgaatctagac----aagtgt 79
|||||||||||||||| ||||||||||| |||||||||||||||||| || | | |
Sbjct: 27 aagactttctagcattacccacattcatttagatgttaatgaatctaaacacatatatat 86
Query: 80 gtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaa 139
|||||||||||||||||||||| | | | ||||||| |||||||||||| | ||||
Sbjct: 87 gtctagattcattaacatctatgggtacataggcaatgttagaaagtcttacattgtgaa 146
Query: 140 acggaggaagtag 152
||||||| |||||
Sbjct: 147 acggagggagtag 159
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 97.6 bits (49), Expect = 4e-20
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 76 gtgtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacc 135
||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 65 gtgtgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattg 124
Query: 136 tgaaacggaggaagtag 152
||||||||||| |||||
Sbjct: 125 tgaaacggagggagtag 141
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||||||||||||||||| |||||||||||||||||||
Sbjct: 141 ctactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtt 82
Query: 61 aatgaatctagaca 74
||| ||||||||||
Sbjct: 81 aataaatctagaca 68
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 128/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||| ||| ||| || ||||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 62 atgaatctagacaagtgt----gtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||| ||| ||| ||||||||| ||||||||||| ||| ||||||||||||
Sbjct: 65 atgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatg 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| | ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 97.6 bits (49), Expect = 4e-20
Identities = 128/154 (83%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 62 atgaatctagac----aagtgtgtctagattcattaacatctatatgaatgtgggcaatg 117
|| ||||||||| | | ||| |||||||||||||||||| ||||||| || |||
Sbjct: 98 ataaatctagacatatacatatgtttagattcattaacatctaaatgaatggaggtaata 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagta 151
||| ||||||||| | ||||||||||||||||
Sbjct: 38 ctataaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 97.6 bits (49), Expect = 4e-20
Identities = 86/98 (87%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgtc----tag 85
|||||||||| ||||||||||||| |||||||||||||||||||| | | || |||
Sbjct: 7 ttctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatttag 66
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||||||| ||||||||||||| ||||||||||
Sbjct: 67 attcattaacatcaatatgaatgtgggaaatgctagaa 104
Score = 97.6 bits (49), Expect = 4e-20
Identities = 86/98 (87%), Gaps = 4/98 (4%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatcta----gacaagtgtgtctag 85
|||||||||| ||||||||||||| |||||||||||||||| || | | |||||||
Sbjct: 104 ttctagcatttcccacattcatattgatgttaatgaatctaaatagatatatatgtctag 45
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||||||| ||||||||||||| ||||||||||
Sbjct: 44 attcattaacatcaatatgaatgtgggaaatgctagaa 7
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 95.6 bits (48), Expect = 2e-19
Identities = 123/151 (81%), Gaps = 14/151 (9%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||| ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 62 atgaatctagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatgctag 121
||||||||||| ||||||||||||||||||||| || ||||||||||
Sbjct: 80 atgaatctaga--------------ttcattaacatctatatgaatatgagcaatgctag 35
Query: 122 aaagtcttataacctgaaacggaggaagtag 152
|||| |||||| |||||| ||||||||||
Sbjct: 34 aaagacttatattatgaaacagaggaagtag 4
Score = 87.7 bits (44), Expect = 4e-17
Identities = 107/131 (81%), Gaps = 14/131 (10%)
Strand = Plus / Plus
Query: 21 tataagactttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtg 80
|||||| |||||||||||||| || |||||||||||||||||||||||||
Sbjct: 24 tataagtctttctagcattgctcatattcatatagatgttaatgaatcta---------- 73
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
||||||||| ||||||||||||| |||| ||||||||||||||||||| |||||
Sbjct: 74 ----gattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 141 cggaggaagta 151
|||||| ||||
Sbjct: 130 cggagggagta 140
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 95.6 bits (48), Expect = 2e-19
Identities = 124/150 (82%), Gaps = 12/150 (8%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtg- 63
Query: 62 atgaatctagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatgctag 121
||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 64 -----tct------gtgtgtctaaattcattaacatctatatgaatgtgggcaatgctaa 112
Query: 122 aaagtcttataacctgaaacggaggaagta 151
||||| ||| | ||||||||||| ||||
Sbjct: 113 aaagttttacattatgaaacggagggagta 142
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||| ||||| |||||||||||||||||||||||||||||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtta 83
Query: 62 atgaatctagaca 74
|||||| ||||||
Sbjct: 82 atgaatttagaca 70
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 94 acatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 130
||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 60 tgtctagattcattaacatctatatgaatgtggacaatgctagaaagtctta 111
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctagaca 74
|||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 111 taagactttctagcattgtccacattcatatagatgttaatgaatctagaca 60
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 94 acatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
|||||||||||||||||| |||||||||||||||||| | ||||| ||||||||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatagatgt 59
|||||||||||||||||| ||||||||||||||||||
Sbjct: 26 taagactttctagcattgtccacattcatatagatgt 62
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 93.7 bits (47), Expect = 7e-19
Identities = 77/86 (89%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 36 cattgcccacattcatatagatgttaatgaatctagacaagtgtgtctagattcattaac 95
|||| ||||||||||||| ||||| |||||||||||||| | |||||||||||||| ||
Sbjct: 5 catttcccacattcatattgatgtcaatgaatctagaca--tctgtctagattcattgac 62
Query: 96 atctatatgaatgtgggcaatgctag 121
||| ||||||||||||| ||||||||
Sbjct: 63 atcaatatgaatgtgggaaatgctag 88
Score = 85.7 bits (43), Expect = 2e-16
Identities = 76/86 (88%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 32 ctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgtctagattcat 91
|||||||| ||||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct: 88 ctagcatttcccacattcatattgatgtcaatgaatctagaca--gatgtctagattcat 31
Query: 92 taacatctatatgaatgtgggcaatg 117
| ||||| ||||||||||||| ||||
Sbjct: 30 tgacatcaatatgaatgtgggaaatg 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 93.7 bits (47), Expect = 7e-19
Identities = 114/135 (84%), Gaps = 6/135 (4%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctagaca----agtg 78
||||||||||||||||| ||||||||||| |||||||||||||||||| ||| ||
Sbjct: 26 taagactttctagcattacccacattcatttagatgttaatgaatctaaacatatgtatg 85
Query: 79 tgtctagattcattaac--atctatatgaatgtgggcaatgctagaaagtcttataacct 136
||| ||||||||||||| || |||||| ||||| ||||||||| ||||||||| | |
Sbjct: 86 tgtttagattcattaacatatatatatgtatgtgagcaatgctaaaaagtcttacattgt 145
Query: 137 gaaacggaggaagta 151
|||||||||| ||||
Sbjct: 146 gaaacggagggagta 160
Score = 85.7 bits (43), Expect = 2e-16
Identities = 113/135 (83%), Gaps = 6/135 (4%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagat--gt 59
|||| ||||||||||| | ||||||||| ||||||||| ||||| |||||| || ||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgt 101
Query: 60 taatgaatctagacaagtg----tgtctagattcattaacatctatatgaatgtgggcaa 115
||||||||||| ||| | ||| |||||||||||||||||| ||||||||||| ||
Sbjct: 100 taatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgggtaa 41
Query: 116 tgctagaaagtctta 130
|||||||||||||||
Sbjct: 40 tgctagaaagtctta 26
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 105/124 (84%), Gaps = 4/124 (3%)
Strand = Plus / Minus
Query: 33 tagcattgcccacattcatatagatgttaatgaatctagacaagtg----tgtctagatt 88
|||||||||||||||||||||||||| ||||||||||| ||| || | ||||||||
Sbjct: 127 tagcattgcccacattcatatagatggtaatgaatctaaacatatgtctatatctagatt 68
Query: 89 cattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaa 148
|||||||||||||||| || |||| || ||||||| | |||| | |||||||||||||
Sbjct: 67 cattaacatctatatgcatatgggtaaggctagaatgacttacattatgaaacggaggaa 8
Query: 149 gtag 152
||||
Sbjct: 7 gtag 4
Score = 83.8 bits (42), Expect = 6e-16
Identities = 105/124 (84%), Gaps = 4/124 (3%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | ||||||| || |||| || ||||||||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtt 63
Query: 61 aatgaatctagaca-ag---tgtgtctagattcattaacatctatatgaatgtgggcaat 116
|||||||||||| | || | ||| ||||||||||| ||||||||||||||||||||||
Sbjct: 64 aatgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaat 123
Query: 117 gcta 120
||||
Sbjct: 124 gcta 127
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggag 145
|||||||| ||||||||||||| |||| |||||||||||||||||||| ||||||||||
Sbjct: 49 attcattatcatctatatgaatatgggtaatgctagaaagtcttataatatgaaacggag 108
Query: 146 gaagtag 152
|||||||
Sbjct: 109 gaagtag 115
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| |||||||||||||||||||| |||| ||||||||||||| |
Sbjct: 115 ctacttcctccgtttcatattataagactttctagcattacccatattcatatagatgat 56
Query: 61 aatgaat 67
|||||||
Sbjct: 55 aatgaat 49
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcat 51
|||| ||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctaacattgcccacattcat 54
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 102 atgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
|||||||||||||||| ||||||||||||||| ||||||||||| ||||
Sbjct: 54 atgaatgtgggcaatgttagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 105/124 (84%), Gaps = 4/124 (3%)
Strand = Plus / Plus
Query: 33 tagcattgcccacattcatatagatgttaatgaatctagacaagtgtgtcta----gatt 88
||||||| ||||||||||||| |||||||||||||||||||| | | |||| ||||
Sbjct: 36 tagcattacccacattcatattgatgttaatgaatctagacatatatatctatctagatt 95
Query: 89 cattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaa 148
||||||||| ||||||||||||| ||||||| || | |||||| |||||||||||||
Sbjct: 96 cattaacattaatatgaatgtgggaaatgctaaaatgacttatattgtgaaacggaggaa 155
Query: 149 gtag 152
||||
Sbjct: 156 gtag 159
Score = 85.7 bits (43), Expect = 2e-16
Identities = 104/124 (83%), Gaps = 4/124 (3%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| |||||| | || ||||||| ||||||||||||| |||||
Sbjct: 159 ctacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtt 100
Query: 61 aatgaatctagacaagtgt----gtctagattcattaacatctatatgaatgtgggcaat 116
|||||||||||| | | | ||||||||||||||||||| ||||||||||||| |||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaat 40
Query: 117 gcta 120
||||
Sbjct: 39 gcta 36
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 91.7 bits (46), Expect = 3e-18
Identities = 103/123 (83%), Gaps = 8/123 (6%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgtctagattc 89
|||||||||| ||||||||||||| |||||||||||| ||||||| |||||||
Sbjct: 118 ttctagcatttcccacattcatattgatgttaatgaaactagaca--------tagattc 67
Query: 90 attaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaag 149
||||||||| |||||||||||| |||||||||| | |||| | ||||||||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacggaggaag 7
Query: 150 tag 152
|||
Sbjct: 6 tag 4
Score = 83.8 bits (42), Expect = 6e-16
Identities = 102/123 (82%), Gaps = 8/123 (6%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| |||||||||||| ||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 61 aatgaatctagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatgcta 120
|||||||||| ||||||| |||||||||||| ||||||||||||| |||||||
Sbjct: 64 aatgaatcta--------tgtctagtttcattaacatcaatatgaatgtgggaaatgcta 115
Query: 121 gaa 123
|||
Sbjct: 116 gaa 118
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 77 tgtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 130
||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 34 tgtgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtctta 87
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctagaca 74
|||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 87 taagactttctagcattgtccacattcatatagatgttaacgaatctagaca 36
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacg 142
|||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 143 gaggaagtag 152
|||| |||||
Sbjct: 128 gagggagtag 137
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| ||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 137 ctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtt 78
Query: 61 aatgaatcta 70
||||||||||
Sbjct: 77 aatgaatcta 68
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 105 aatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||| |||||| | ||||||||||| ||||||||||||||||
Sbjct: 51 aatgtggacaatgccaaaaagtcttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| ||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 4 ctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtt 63
Query: 61 aatgaatcta 70
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacg 142
|||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 143 gaggaagtag 152
|||| |||||
Sbjct: 13 gagggagtag 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 105 aatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||| |||||| | ||||||||||| ||||||||||||||||
Sbjct: 90 aatgtggacaatgccaaaaagtcttatattgtgaaacggaggaagta 136
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||||||||||||||| |||||||||| ||||||||||||||||| | |||
Sbjct: 77 tgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtga 18
Query: 139 aacggaggaagta 151
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||||||||||||||| |||||||||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 62 atgaatctagaca 74
|||||||||||||
Sbjct: 65 atgaatctagaca 77
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 89.7 bits (45), Expect = 1e-17
Identities = 85/98 (86%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgt----gtctag 85
|||||||||| | ||||||||||| |||||||||||||||||| | | | ||||||
Sbjct: 7 ttctagcatttctcacattcatattgatgttaatgaatctagatagatatatatgtctag 66
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||||||| ||||||||||||| ||||||||||
Sbjct: 67 attcattaacatcaatatgaatgtgggaaatgctagaa 104
Score = 89.7 bits (45), Expect = 1e-17
Identities = 85/98 (86%), Gaps = 4/98 (4%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagac----aagtgtgtctag 85
|||||||||| ||||||||||||| ||||||||||||||||||| | | | |||||
Sbjct: 104 ttctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatctag 45
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||||||| ||||||||||| | ||||||||||
Sbjct: 44 attcattaacatcaatatgaatgtgagaaatgctagaa 7
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 85/98 (86%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgt----gtctag 85
||||||||||| ||||||||||||||||| |||||||||||| || | | ||||||
Sbjct: 33 ttctagcattgtccacattcatatagatgctaatgaatctaggcatatatataagtctag 92
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||||||| |||||||||||| ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtggaaaatgctagaa 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 85/98 (86%), Gaps = 4/98 (4%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagac----aagtgtgtctag 85
|||||||||| |||||||||||| ||||||||||||||||||| | | || ||||
Sbjct: 130 ttctagcattttccacattcatattgatgttaatgaatctagacttatatatatgcctag 71
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||| ||||||||||||||||| |||||||||||
Sbjct: 70 attcattagcatctatatgaatgtggacaatgctagaa 33
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 84/96 (87%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgt--gtctagat 87
|||||||||| | |||||||||| ||||||||||||| |||||| | | ||||||||
Sbjct: 33 ttctagcattttctacattcatattgatgttaatgaatgtagacatatatatgtctagat 92
Query: 88 tcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||||| ||||||||||||| ||||||||||
Sbjct: 93 tcattaacatcaatatgaatgtgggaaatgctagaa 128
Score = 89.7 bits (45), Expect = 1e-17
Identities = 84/96 (87%), Gaps = 2/96 (2%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagac--aagtgtgtctagat 87
|||||||||| ||||||||||||| ||||||||||||||||||| | | |||||| ||
Sbjct: 128 ttctagcatttcccacattcatattgatgttaatgaatctagacatatatatgtctacat 69
Query: 88 tcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||||| |||||||||| | ||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtagaaaatgctagaa 33
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 85.7 bits (43), Expect = 2e-16
Identities = 102/122 (83%), Gaps = 6/122 (4%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgtctagattc 89
|||||||||| ||||||||||||| ||||||||||||| || | |||||||||||
Sbjct: 120 ttctagcatttcccacattcatattgatgttaatgaatatata------tgtctagattc 67
Query: 90 attaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaag 149
|||||||| |||| |||||||| |||||||||| | |||| | ||||||||||||||
Sbjct: 66 attaacattaatataaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 150 ta 151
||
Sbjct: 6 ta 5
Score = 77.8 bits (39), Expect = 4e-14
Identities = 80/94 (85%), Gaps = 6/94 (6%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgtctagattc 89
|||||||||| |||||||| |||| ||||||||||||||||||| | || ||||
Sbjct: 33 ttctagcatttcccacatttatattaatgttaatgaatctagaca------tatatattc 86
Query: 90 attaacatctatatgaatgtgggcaatgctagaa 123
||||||||| ||||||||||||| ||||||||||
Sbjct: 87 attaacatcaatatgaatgtgggaaatgctagaa 120
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 85.7 bits (43), Expect = 2e-16
Identities = 128/155 (82%), Gaps = 6/155 (3%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||||||||| ||||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatgtta 62
Query: 62 atgaatctagacaagtg----tgtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||||| | | | |||||||||||||| ||||| || ||||||| |||||
Sbjct: 63 atgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggacaatg 122
Query: 118 ctagaaagtcttataacctgaaacggaggaagtag 152
||| ||||||||| | |||||||||||||||||
Sbjct: 123 ctaaaaagtcttacattgtgaaacggaggaagtag 157
Score = 85.7 bits (43), Expect = 2e-16
Identities = 128/155 (82%), Gaps = 6/155 (3%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | ||||||||| |||||||| ||||||| || ||||| ||
Sbjct: 157 ctacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatt 98
Query: 61 aatgaatctagacaagtgtgt----ctagattcattaacatctatatgaatgtgggcaat 116
|||||||||||| | ||| | |||||||||||||||||||||| |||||| ||||
Sbjct: 97 aatgaatctagatatatgtatgtttctagattcattaacatctatat--atgtggacaat 40
Query: 117 gctagaaagtcttataacctgaaacggaggaagta 151
| |||||||||||| | ||||||||||| ||||
Sbjct: 39 ggtagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||||||||||||| | |||||||||||||| |||||||||||| |||||||||||
Sbjct: 135 ctactacctccgttttacaatataagactttctaacattgcccacatatatatagatgtt 76
Query: 61 aatgaatcta 70
||||||||||
Sbjct: 75 aatgaatcta 66
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 77 tgtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttata 132
||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 60 tgtgtttagattcattaacatctatatatatgtgggcaatgttagaaagtcttata 115
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 7 cctccgtttcaggttataagactttctagcattgcccacat 47
||||||||||| |||||||||||||||||||||||||||
Sbjct: 10 cctccgtttcataatataagactttctagcattgcccacat 50
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 106 atgtgggcaatgctagaaagtcttataacctgaaacggagg 146
||||||||||||||||||||||||||| |||||||||||
Sbjct: 50 atgtgggcaatgctagaaagtcttatattatgaaacggagg 10
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 106/127 (83%), Gaps = 4/127 (3%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgt----ctag 85
|||||||||| ||| |||||||| |||||||||||||||| ||| | | | ||||
Sbjct: 33 ttctagcattttccatattcatattgatgttaatgaatctatacatatatatttatctag 92
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggag 145
||||||||||||| ||||||||||||| |||||||||| | |||| | ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggag 152
Query: 146 gaagtag 152
|||||||
Sbjct: 153 gaagtag 159
Score = 83.8 bits (42), Expect = 6e-16
Identities = 106/127 (83%), Gaps = 4/127 (3%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| ||||||||||||| ||||||
Sbjct: 159 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 100
Query: 61 aatgaatctagacaa----gtgtgtctagattcattaacatctatatgaatgtgggcaat 116
|||||||||||| || | ||| |||||||||||||||| |||||||| ||| |||
Sbjct: 99 aatgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaat 40
Query: 117 gctagaa 123
|||||||
Sbjct: 39 gctagaa 33
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 106/127 (83%), Gaps = 4/127 (3%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatc----tagacaagtgtgtctag 85
|||||||||| ||||||||||||| |||||||||||||| |||| | | ||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctagatagatatatatgtctac 92
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggag 145
||||||||||||| ||||||||||||| ||| ||||| | |||| | ||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgggaaatattagaatgacttacattgtgaaacggag 152
Query: 146 gaagtag 152
|||||||
Sbjct: 153 gaagtag 159
Score = 75.8 bits (38), Expect = 2e-13
Identities = 75/87 (86%), Gaps = 4/87 (4%)
Strand = Plus / Minus
Query: 41 cccacattcatatagatgttaatgaatctagacaagtgtgtcta----gattcattaaca 96
||||||||||||| ||||||||||||| |||||| | | |||| ||||||||||||
Sbjct: 119 cccacattcatattgatgttaatgaatgtagacatatatatctatctagattcattaaca 60
Query: 97 tctatatgaatgtgggcaatgctagaa 123
|| ||||||||||||| ||||||||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 26 taagactttctagcattgtccacattcatatagatgttaataaatctaga 75
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 130
|||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtctta 26
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 81.8 bits (41), Expect = 2e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 60 tgtctagattcattaacatctatatgaatgtgtgcaatgctagaa 104
Score = 81.8 bits (41), Expect = 2e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagaca 74
|||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 104 ttctagcattgcacacattcatatagatgttaatgaatctagaca 60
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 81.8 bits (41), Expect = 2e-15
Identities = 95/112 (84%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 43 cacattcatatagatgttaatgaatctagacaagtgt--gtctagattcattaacatcta 100
|||||||||||||||||||||||||||| || | | |||| ||||||||||||||||
Sbjct: 115 cacattcatatagatgttaatgaatctatgcatatatatgtcttgattcattaacatcta 56
Query: 101 tatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagtag 152
||||||||||| ||||||| || | |||| | |||||||||||||||||
Sbjct: 55 catgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtag 4
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/80 (87%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 33 tagcattgcccacattcatatagatgttaatgaatctagac--aagtgtgtctagattca 90
||||||| ||||||||||| |||||||||||||||| |||| | | || ||||||||
Sbjct: 36 tagcatttcccacattcatgtagatgttaatgaatcaagacatatatatgcatagattca 95
Query: 91 ttaacatctatatgaatgtg 110
||||||||||||||||||||
Sbjct: 96 ttaacatctatatgaatgtg 115
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||||||||||||| ||||||||||||| |||||||||| | |||| | |||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 139 aacggaggaagta 151
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagaca 74
|||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctagaca 77
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 81.8 bits (41), Expect = 2e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||||||||||||||| | |||| | |||||||||| ||||||||||||| |||||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 62 atgaatctagaca 74
|||||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 84/98 (85%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgt----gtctag 85
||||| |||| ||||||||||||||| |||||||||||||||| | | | ||||||
Sbjct: 33 ttctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtctag 92
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||||| |||||||||||||| ||||||||||
Sbjct: 93 attcattaacacctatatgaatgtggaaaatgctagaa 130
Score = 81.8 bits (41), Expect = 2e-15
Identities = 84/98 (85%), Gaps = 4/98 (4%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagac----aagtgtgtctag 85
|||||||||| |||||||||||||| ||||||||||||||||| | | | |||||
Sbjct: 130 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 71
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||||| ||||||||||||||| |||| |||||
Sbjct: 70 attcattaacacctatatgaatgtgggaaatgttagaa 33
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 105/126 (83%), Gaps = 4/126 (3%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgtc----tag 85
|||||||||| | ||||||||||| ||||||||||||||||||| | | || |||
Sbjct: 130 ttctagcatttctcacattcatattaatgttaatgaatctagacatatatatccaactag 71
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggag 145
||||||||||||| |||||||| |||| |||||||||| | |||| | ||||||||||
Sbjct: 70 attcattaacatccatatgaatatgggtaatgctagaatgacttacattgtgaaacggag 11
Query: 146 gaagta 151
||||||
Sbjct: 10 gaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 83/98 (84%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatcta----gacaagtgtgtctag 85
|||||||||| |||| |||||||| |||||||||||||||| || | | |||||||
Sbjct: 33 ttctagcattacccatattcatatggatgttaatgaatctagttggatatatatgtctag 92
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||| ||||||||||| | ||||||||||
Sbjct: 93 attcattaacattaatatgaatgtgagaaatgctagaa 130
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 81.8 bits (41), Expect = 2e-15
Identities = 105/126 (83%), Gaps = 4/126 (3%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| || |||| | || || |||| | |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 62 atgaatctagac----aagtgtgtctagattcattaacatctatatgaatgtgggcaatg 117
|||||||||||| | | | | ||||||||| |||||||||||||||||||| ||||
Sbjct: 65 atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124
Query: 118 ctagaa 123
||||||
Sbjct: 125 ctagaa 130
Score = 81.8 bits (41), Expect = 2e-15
Identities = 105/126 (83%), Gaps = 4/126 (3%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgt----gtctag 85
|||||||||| |||||||||||||||||||| ||||||||| | | | | ||||||
Sbjct: 130 ttctagcatttcccacattcatatagatgttgatgaatctaaatatatatagatgtctag 71
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggag 145
||||||||||||||||||||||||| | |||| || || | |||| || ||||||||||
Sbjct: 70 attcattaacatctatatgaatgtgagaaatgataaaatgacttacaatgtgaaacggag 11
Query: 146 gaagta 151
| ||||
Sbjct: 10 ggagta 5
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 81.8 bits (41), Expect = 2e-15
Identities = 84/98 (85%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagac----aagtgtgtctag 85
|||||||||| |||||||||||||| ||||||||||||||||| | | | |||||
Sbjct: 3 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 62
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||||| ||||||||||||||| |||| |||||
Sbjct: 63 attcattaacacctatatgaatgtgggaaatgttagaa 100
Score = 81.8 bits (41), Expect = 2e-15
Identities = 84/98 (85%), Gaps = 4/98 (4%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgt----gtctag 85
||||| |||| ||||||||||||||| |||||||||||||||| | | | ||||||
Sbjct: 100 ttctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtctag 41
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||||| |||||||||||||| ||||||||||
Sbjct: 40 attcattaacacctatatgaatgtggaaaatgctagaa 3
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatata 54
|||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatata 57
Score = 81.8 bits (41), Expect = 2e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 99 tatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 108 gtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
|||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 61 gtgggcaatgctagaaagtcttataatatgaaacggaggaagta 104
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccac 45
|||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 104 tacttcctccgtttcatattataagactttctagcattgcccac 61
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 130
||||||||||||||||||||||||| ||| ||| ||||||||||||||||||
Sbjct: 65 tgtctagattcattaacatctatataaatatggacaatgctagaaagtctta 116
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctagaca 74
|||||||||||||||||| ||| ||| |||||||||||||||||||||||||
Sbjct: 116 taagactttctagcattgtccatatttatatagatgttaatgaatctagaca 65
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 80 gtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaa 104
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagac 73
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 104 ttctagcattgcccacatgcatatagatgttaatgaatctagac 61
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 24 aagactttctagcattgcccacattcatatagatgttaatgaatctagaca 74
||||||||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 141 aagactttccagcattgcccacattcacatagaagttaatgaatctagaca 91
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtctt 129
||||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 91 tgtctagattcattaacttctatgtgaatgtgggcaatgctggaaagtctt 141
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 24 aagactttctagcattgcccacattcatatagatgttaatgaatctagaca 74
|||| |||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 1 aagattttccagcattgcccacattcacatagaagttaatgaatctagaca 51
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtctt 129
||||||||||||||||| ||||| ||||||||||||||||| |||| ||||
Sbjct: 51 tgtctagattcattaacttctatgtgaatgtgggcaatgctggaaaatctt 1
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 100 atatgaatgtgggcaatgctagaaagtctta 130
|||||||||||||||||||| ||||||||||
Sbjct: 51 atatgaatgtgggcaatgctggaaagtctta 81
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatat 53
|||||||||| ||||||||||||||||||||
Sbjct: 81 taagactttccagcattgcccacattcatat 51
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 102 atgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagtag 152
|||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 65 atgaatatgggcaatgctagaaagtcttataatatgaaacggaggaagtag 115
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| ||||||||||||||| |||| ||||||||||||| ||| |
Sbjct: 4 ctactccctccgtttcatactataagactttctagtattgtccacattcatataaatgct 63
Query: 61 aatgaat 67
|||||||
Sbjct: 64 aatgaat 70
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggag 145
|||||||| ||| ||||||||||||| |||| ||||||||||||||| ||||||||||
Sbjct: 70 attcattagcatttatatgaatgtggacaatactagaaagtcttatagtatgaaacggag 11
Query: 146 gaagtag 152
| |||||
Sbjct: 10 ggagtag 4
Score = 69.9 bits (35), Expect = 9e-12
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcat 51
||||| ||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 115 ctacttcctccgtttcatattataagactttctagcattgcccatattcat 65
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
|||||||||||||||||| ||||||||||| | |||||||||| | |||||| |||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 141 cggaggaagta 151
|||||||||||
Sbjct: 117 cggaggaagta 127
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | |||||||||| | ||||||||||| |||||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 62 atgaatctaga 72
|||||||||||
Sbjct: 67 atgaatctaga 57
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
||||||||| |||||||||| ||||||||||||| |||||||||| | |||| | |||
Sbjct: 57 tgtctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatga 116
Query: 139 aacggaggaagtag 152
||||||||||||||
Sbjct: 117 aacggaggaagtag 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| ||||||||||||| ||||||
Sbjct: 130 ctacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 71
Query: 61 aatgaatctagaca 74
|||| |||||||||
Sbjct: 70 aatggatctagaca 57
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 126/155 (81%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| |||||| | ||||| | || |||||||||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtt 63
Query: 61 aatgaatctagacaagtgtgt----ctagattcattaacatctatatgaatgtgggcaat 116
|||||||||||| || | | | ||||||||||||| ||| ||||||||||||| |||
Sbjct: 64 aatgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaat 123
Query: 117 gctagaaagtcttataacctgaaacggaggaagta 151
||||||| | |||||| ||||||||||| ||||
Sbjct: 124 gctagaatgacttatattgtgaaacggagggagta 158
Score = 75.8 bits (38), Expect = 2e-13
Identities = 126/155 (81%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | |||||||||| ||||||||||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 62 atgaatctag----acaagtgtgtctagattcattaacatctatatgaatgtgggcaatg 117
|||||||||| | | | | ||||||||||||||||| |||||||||||| || |
Sbjct: 98 atgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaag 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagtag 152
||||| | |||||| |||||||||||||||||
Sbjct: 38 ttagaatgacttatattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||||||||||||| ||||||||||||| |||||||||| | |||| | |||
Sbjct: 86 tgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 145
Query: 139 aacggaggaagtag 152
|||||||| |||||
Sbjct: 146 aacggagggagtag 159
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| ||||||||||||| ||||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 100
Query: 61 aatgaatctagaca 74
||||||||||||||
Sbjct: 99 aatgaatctagaca 86
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| ||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 63
Query: 61 aatgaatcta 70
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacg 142
|||||||||||||||||||||||||||||| |||||||||| | |||| | |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 143 gaggaagtag 152
|||| |||||
Sbjct: 13 gagggagtag 4
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 96 atctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagtag 152
||||||||||||||||| |||||||||| | |||| | ||||||||||| |||||
Sbjct: 69 atctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 125
Score = 50.1 bits (25), Expect = 9e-06
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagat 57
||||| ||||||||||| | |||| | |||||||||| |||||||||||||||||
Sbjct: 125 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagat 69
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggag 145
||||||||| |||||||||||||||||||| |||||||||||||| | |||||| |||
Sbjct: 49 attcattaatatctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacagag 108
Query: 146 gaagta 151
||||||
Sbjct: 109 gaagta 114
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaat 67
|||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 93 taagactttctagcgttgcccacattcatatagatattaatgaat 49
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 77 tgtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 130
||||||||||||| ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 79 tgtgtctagattcgttaacatctatatgaatatggttaatgctagaaagtctta 26
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctagaca 74
||||||||||||||||| ||| ||||||||||||||||| |||||||||||
Sbjct: 26 taagactttctagcattaaccatattcatatagatgttaacgaatctagaca 77
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacg 142
|||||||||||||||| ||||||||||||| ||||||||| | |||||| |||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 143 gaggaagtag 152
||||||||||
Sbjct: 124 gaggaagtag 133
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| |||||| | ||||||||| ||||||||||||| ||||||
Sbjct: 133 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 74
Query: 61 aatgaatcta 70
||||||||||
Sbjct: 73 aatgaatcta 64
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 26 taagactttctagcattgcccacatttttatggatgttaatgaatctaga 75
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtctta 130
|||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtctta 26
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 100 atatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||||||||||||||||||||| | ||||| ||||||||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaatggaggaagta 130
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatat 53
|||||||||||||||||||||||||||||||
Sbjct: 109 taagactttctagcattgcccacattcatat 79
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 126/155 (81%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | |||||||||| |||||| |||| |||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 62 atgaatctagacaagtgtgtcta----gattcattaacatctatatgaatgtgggcaatg 117
||||||||||||| | | |||| ||||||||||||| ||||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 118 ctagaaagtcttataacctgaaacggaggaagtag 152
||| || | |||||| |||||||||||||||||
Sbjct: 38 ctacaatgacttatattgtgaaacggaggaagtag 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 125/155 (80%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| |||||| | || ||||||| ||||||||||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtt 63
Query: 61 aatgaatc----tagacaagtgtgtctagattcattaacatctatatgaatgtgggcaat 116
|||||||| |||| | | ||||||||||||||| |||| |||| |||||| |||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaat 123
Query: 117 gctagaaagtcttataacctgaaacggaggaagta 151
||||||| | |||||| ||||||||||| ||||
Sbjct: 124 gctagaatggcttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||||||||||||| |||||||||||| |||| ||||| | |||||| |||
Sbjct: 67 tgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatga 126
Query: 139 aacggaggaagtag 152
||||||||||||||
Sbjct: 127 aacggaggaagtag 140
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| |||||| | ||||| |||| |||||||||||| ||||||
Sbjct: 140 ctacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtt 81
Query: 61 aatgaatctagaca 74
||||||||||||||
Sbjct: 80 aatgaatctagaca 67
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 65 tgtctagatttattaacatctatatgaatgtggacaatgctagaa 109
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagaca 74
||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 109 ttctagcattgtccacattcatatagatgttaataaatctagaca 65
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 95 catctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagtag 152
||||||| ||||||||||||||||||||| |||| | |||||||||||||||||
Sbjct: 61 catctatgtgaatgtgggcaatgctagaataacttacattatgaaacggaggaagtag 4
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatg 58
||||||||||||||||||||| |||||||
Sbjct: 33 ttctagcattgcccacattcacatagatg 61
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||| |||||||| ||| ||||||||||||||||||||||||||||||| | |||
Sbjct: 54 tgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgtga 113
Query: 139 aacggaggaagta 151
|||||| ||||||
Sbjct: 114 aacggatgaagta 126
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatctagaca 74
||||||||||||||||||||||||||||||| ||| |||||||| ||||||
Sbjct: 105 taagactttctagcattgcccacattcatatggatactaatgaatttagaca 54
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 104/126 (82%), Gaps = 4/126 (3%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatc----tagacaagtgtgtctag 85
|||||||||| ||||||||||||| ||| |||||||||| |||| | | |||||||
Sbjct: 130 ttctagcatttcccacattcatattgatattaatgaatctagatagatatatatgtctag 71
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggag 145
||||||||||||| |||| |||||||| ||||| | || | |||| | ||||||||||
Sbjct: 70 attcattaacatcaatataaatgtgggaaatgcaaaaatgacttacattgtgaaacggag 11
Query: 146 gaagta 151
||||||
Sbjct: 10 gaagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 79/93 (84%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 35 gcattgcccacattcatatagatgttaatgaatctagacaagtgtgtcta----gattca 90
||||| |||||||| |||| |||||||||||||||||||| | | |||| ||||||
Sbjct: 38 gcatttcccacatttatattgatgttaatgaatctagacatatatatctatctagattca 97
Query: 91 ttaacatctatatgaatgtgggcaatgctagaa 123
|||| ||| ||||||||||||| ||||||||||
Sbjct: 98 ttaatatcaatatgaatgtgggaaatgctagaa 130
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 73.8 bits (37), Expect = 6e-13
Identities = 62/69 (89%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacg 142
|||||||| ||||||||| |||||||||| |||||||||||||||||| | |||||||
Sbjct: 72 tagattcaataacatctaaatgaatgtgg-caatgctagaaagtcttacattgtgaaacg 130
Query: 143 gaggaagta 151
|||||||||
Sbjct: 131 gaggaagta 139
Score = 65.9 bits (33), Expect = 1e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||||||||||||||| |||||||||| |||||||||
Sbjct: 139 tacttcctccgtttcacaatgtaagactttctagcattg-ccacattcatttagatgtta 81
Query: 62 atgaatcta 70
||||||||
Sbjct: 80 ttgaatcta 72
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 94 acatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||| | |||||| ||||||||||||| |||| | ||||||||||||||||
Sbjct: 62 acatctatacgtatgtggccaatgctagaaaggcttagattgtgaaacggaggaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgt 59
|||| ||||||||||| | |||| ||||||||||||| |||||| | |||||||||
Sbjct: 5 tacttcctccgtttcacaatctaagcctttctagcattggccacatacgtatagatgt 62
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||||||| ||||| ||||||||||||| |||||||||| | |||| | |||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 139 aacggaggaagta 151
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaa 75
|||||||||| ||||||||||||| ||||| |||||||||||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgtcaatgaatctagacaa 78
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 93 aacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagtag 152
|||||| ||||||||||||| |||||||||| | |||| | ||||||||||| |||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagtag 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| ||||||||||||| ||||||
Sbjct: 136 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 95 catctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||||||||||| |||||||||||||| | ||||||||||||||||
Sbjct: 61 catctatatgaatgtgggcaacgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 95 catctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagtag 152
|||||||||||||||||||||||||||||| ||||| | ||||||||||| |||||
Sbjct: 64 catctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagtag 121
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatg 58
||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||
Sbjct: 121 ctactccctccgtttcacaatgtaagagtttctagcattgcccacattcatatagatg 64
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatg 58
|||| ||||||||||| | |||||||||||||| |||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatatagatg 61
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa Japonica
Group
Length = 137
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtc 127
||||||||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 49 tgtctagattcattaacttctatgtgaatgtgggcaatgctggaaagtc 1
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 26 gactttctagcattgcccacattcatatagatgttaatgaatctagaca 74
||||||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 1 gactttccagcattgcccacattcacatagaagttaatgaatctagaca 49
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaa 124
||||||||||||||||| ||||| ||||||||||||||||| ||||
Sbjct: 89 tgtctagattcattaacttctatgtgaatgtgggcaatgctggaaa 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 29 tttctagcattgcccacattcatatagatgttaatgaatctagaca 74
|||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 134 tttccagcattgcccacattcacatagaagttaatgaatctagaca 89
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatat 53
|||||||||| ||||||||||||||||||||
Sbjct: 59 taagactttccagcattgcccacattcatat 89
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 100 atatgaatgtgggcaatgctagaaagtctta 130
|||||||||||||||||||| ||||||||||
Sbjct: 89 atatgaatgtgggcaatgctggaaagtctta 59
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacg 142
|||||||||||||||| ||||||||||||| |||||||||| | |||||| |||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 131
Query: 143 gaggaagta 151
|||| ||||
Sbjct: 132 gagggagta 140
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | |||||||||| ||||||||||||| |||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 62 atgaatcta 70
|||||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 104/126 (82%), Gaps = 4/126 (3%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgtcta----g 85
|||||| ||| ||||||||||||| | |||||||||||||||||| | | |||| |
Sbjct: 130 ttctagtatttcccacattcatattgttgttaatgaatctagacatatatatctatctag 71
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggag 145
||||||||||||| ||||| |||||| |||||||||| | |||| | ||||||||||
Sbjct: 70 attcattaacatcaatatggatgtggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 146 gaagta 151
||||||
Sbjct: 10 gaagta 5
Score = 65.9 bits (33), Expect = 1e-10
Identities = 82/98 (83%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgt----gtctag 85
|||||||||| |||||| ||||| |||||||||||||||||| | | | ||||||
Sbjct: 33 ttctagcattttccacatccatattgatgttaatgaatctagatagatatatatgtctag 92
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||||| | ||||||||||||| ||| ||||||
Sbjct: 93 attcattaacaacaatatgaatgtgggaaatactagaa 130
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 71.9 bits (36), Expect = 2e-12
Identities = 67/77 (87%), Gaps = 4/77 (5%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgtctagattc 89
||||| |||| ||||||||||||| |||||||||||||||| ||| | |||||||||
Sbjct: 33 ttctaacatttcccacattcatattgatgttaatgaatctaaaca----tatctagattc 88
Query: 90 attaacatctatatgaa 106
||||||||| |||||||
Sbjct: 89 attaacatcaatatgaa 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 67/77 (87%), Gaps = 4/77 (5%)
Strand = Plus / Minus
Query: 47 ttcatatagatgttaatgaatctagacaagtgtgtctagattcattaacatctatatgaa 106
||||||| |||||||||||||||||| | ||| |||||||||||||||| |||||||
Sbjct: 105 ttcatattgatgttaatgaatctagata----tgtttagattcattaacatcaatatgaa 50
Query: 107 tgtgggcaatgctagaa 123
|||||| |||| |||||
Sbjct: 49 tgtgggaaatgttagaa 33
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa Indica
Group
Length = 91
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 108 gtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
|||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 44 gtgggcaatgctagaaagtcttataatatgaaacggaggaagta 87
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccac 45
|||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 87 tacttcctccgtttcatattataagactttctagcattgcccac 44
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagca 37
|||| |||| ||||||||||||||||||||||||||
Sbjct: 5 tactccctctgtttcaggttataagactttctagca 40
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 116 tgctagaaagtcttataacctgaaacggaggaagta 151
|||||||||||||||||||||||||| |||| ||||
Sbjct: 40 tgctagaaagtcttataacctgaaacagagggagta 5
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaag 76
|||||||||| |||| |||||||| ||||||||||||||||||||||
Sbjct: 111 ttctagcatttcccatattcatattgatgttaatgaatctagacaag 65
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaa 111
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 69.9 bits (35), Expect = 9e-12
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 85 gattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacgga 144
|||||||||||||| ||||||||||||| |||||||||| | |||| | |||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 145 ggaagta 151
|||||||
Sbjct: 11 ggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatc 68
|||||||||| ||||||||||||| ||||||||||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatc 71
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 85 gattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||| ||||||||||| | ||||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaa 113
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatc 68
|||||||||| | ||||||||||| ||||||||||||||
Sbjct: 113 ttctagcatttctcacattcatattgatgttaatgaatc 75
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
||||||||||||||| || ||||||||||||| |||||||||| | |||| | |||||
Sbjct: 75 tctagattcattaacgtcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 141 cggaggaagta 151
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||||||| ||||||||||||| || |||||||||||||||
Sbjct: 33 ttctagcatttcccacattcatattgacgttaatgaatctaga 75
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 69.9 bits (35), Expect = 9e-12
Identities = 95/116 (81%), Gaps = 8/116 (6%)
Strand = Plus / Plus
Query: 36 cattgcccacattcatatagatgttaatgaatctagacaagtgtgtctagattcattaac 95
|||| ||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 39 catttcccacattcatattgatgttaatgaatctaga--------tctagattcattaac 90
Query: 96 atctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||| |||||||| | | |||||||||| | |||||| || |||||||||||||
Sbjct: 91 atcaatatgaatatagtaaatgctagaatgacttatattgtggaacggaggaagta 146
Score = 63.9 bits (32), Expect = 6e-10
Identities = 80/97 (82%), Gaps = 8/97 (8%)
Strand = Plus / Minus
Query: 21 tataagactttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtg 80
|||||| | |||||||||| | | |||||||| ||||||||||||||||||
Sbjct: 127 tataagtcattctagcatttactatattcatattgatgttaatgaatctaga-------- 76
Query: 81 tctagattcattaacatctatatgaatgtgggcaatg 117
|||||||||||||||||| ||||||||||||| ||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatg 39
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 69.9 bits (35), Expect = 9e-12
Identities = 78/92 (84%), Gaps = 4/92 (4%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatc----tagacaagtgtgtctag 85
|||||||||| ||||||||||||| | |||||||||||| |||| | | |||||||
Sbjct: 33 ttctagcatttcccacattcatattgttgttaatgaatctagatagatatatatgtctag 92
Query: 86 attcattaacatctatatgaatgtgggcaatg 117
|||||||| |||| ||||||||||||| ||||
Sbjct: 93 attcattaccatcaatatgaatgtgggaaatg 124
Score = 69.9 bits (35), Expect = 9e-12
Identities = 78/92 (84%), Gaps = 4/92 (4%)
Strand = Plus / Minus
Query: 36 cattgcccacattcatatagatgttaatgaatctagacaagtgtgtcta----gattcat 91
|||| ||||||||||||| |||| ||||||||||||||| | | |||| |||||||
Sbjct: 124 catttcccacattcatattgatggtaatgaatctagacatatatatctatctagattcat 65
Query: 92 taacatctatatgaatgtgggcaatgctagaa 123
||||| | ||||||||||||| ||||||||||
Sbjct: 64 taacaacaatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 69.9 bits (35), Expect = 9e-12
Identities = 95/116 (81%), Gaps = 8/116 (6%)
Strand = Plus / Minus
Query: 36 cattgcccacattcatatagatgttaatgaatctagacaagtgtgtctagattcattaac 95
|||| ||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 112 catttcccacattcatattgatgttaatgaatctaga--------tctagattcattaac 61
Query: 96 atctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||| |||||||| | | |||||||||| | |||||| || |||||||||||||
Sbjct: 60 atcaatatgaatatagtaaatgctagaatgacttatattgtggaacggaggaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 80/97 (82%), Gaps = 8/97 (8%)
Strand = Plus / Plus
Query: 21 tataagactttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtg 80
|||||| | |||||||||| | | |||||||| ||||||||||||||||||
Sbjct: 24 tataagtcattctagcatttactatattcatattgatgttaatgaatctaga-------- 75
Query: 81 tctagattcattaacatctatatgaatgtgggcaatg 117
|||||||||||||||||| ||||||||||||| ||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatg 112
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 69.9 bits (35), Expect = 9e-12
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaag 76
|||||||||| |||| |||||||| ||||||||||||||||||||||
Sbjct: 33 ttctagcatttcccatattcatattgatgttaatgaatctagacaag 79
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaa 33
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
|||||||||||||| ||| ||||||||||||| |||||||||| | |||| | |||||
Sbjct: 45 tctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 104
Query: 141 cggaggaagta 151
|||||||||||
Sbjct: 105 cggaggaagta 115
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 87 ttctagcatttcccacattcatattgatattaatgaatctaga 45
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
|||||||||||||||||| ||||||||||||| |||| ||||| | |||||| |||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 141 cggaggaagta 151
|||||| ||||
Sbjct: 125 cggagggagta 135
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | ||||| |||| ||||||||||||| |||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 62 atgaatctaga 72
|||||||||||
Sbjct: 75 atgaatctaga 65
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 92 taacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||| |||||||||||| |||||||||| | |||||| ||||||||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | |||||||||| |||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 69.9 bits (35), Expect = 9e-12
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
|||||||||||||||||| |||||||| |||| |||||||||| | |||| | |||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 141 cggaggaagta 151
|||||||||||
Sbjct: 130 cggaggaagta 140
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||||||| |||| |||||||| ||||||||||||||||||
Sbjct: 33 ttctagcatttcccatattcatattgatgttaatgaatctaga 75
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaa 33
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||||||| |||| |||||||| ||||||||||||||||||
Sbjct: 112 ttctagcatttcccatattcatattgatgttaatgaatctaga 70
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacg 142
|||||||||||||||| |||||||||||| |||||||||| | |||| | |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 143 gaggaagtag 152
||||||||||
Sbjct: 13 gaggaagtag 4
Score = 65.9 bits (33), Expect = 1e-10
Identities = 102/124 (82%), Gaps = 7/124 (5%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| |||||||||||| ||||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 61 aatgaatctagacaagtgtgtc-tagattcattaacatctatatgaatgtgggcaatgct 119
|||||||||| |||| | ||| |||||||||||| ||||||||||| | ||||||
Sbjct: 64 aatgaatcta------tgtgacatagtttcattaacatcaatatgaatgtgagaaatgct 117
Query: 120 agaa 123
||||
Sbjct: 118 agaa 121
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||| || |||||| ||||||||||||| |||||||||| | |||| | |||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 139 aacggaggaagtag 152
||||||||||||||
Sbjct: 132 aacggaggaagtag 145
Score = 63.9 bits (32), Expect = 6e-10
Identities = 99/123 (80%), Gaps = 10/123 (8%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| ||||||||||||| ||||||
Sbjct: 145 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 86
Query: 61 aatgaatctagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatgcta 120
|| ||||||||||| |||||| |||||| ||||||||||||| |||||||
Sbjct: 85 cataaatctagacaa----------attcatgaacatcaatatgaatgtgggaaatgcta 36
Query: 121 gaa 123
|||
Sbjct: 35 gaa 33
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||||||||||||| |||||||||||| |||||||||| | |||| | |||
Sbjct: 90 tgtctagattcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtga 149
Query: 139 aacggaggaagtag 152
|||||||| |||||
Sbjct: 150 aacggagggagtag 163
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| |||||||||||| ||||||
Sbjct: 163 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtt 104
Query: 61 aatgaatctagaca 74
||||||||||||||
Sbjct: 103 aatgaatctagaca 90
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 125/155 (80%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | ||||| |||| |||||||||||| |||| |
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgct 100
Query: 61 aatgaatctagacaagtgtgtcta----gattcattaacatctatatgaatgtgggcaat 116
|||||||||||||| | | |||| ||||||||| ||| ||||||||||| | |||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaat 40
Query: 117 gctagaaagtcttataacctgaaacggaggaagta 151
||||||| | |||||| ||||||||||||||||
Sbjct: 39 gctagaatgacttatattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 124/155 (80%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | |||||||||| | ||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 62 atgaatc----tagacaagtgtgtctagattcattaacatctatatgaatgtgggcaatg 117
||||||| |||| | | ||||||||||||||| |||| |||||||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatg 124
Query: 118 ctagaaagtcttataacctgaaacggaggaagtag 152
||||| | |||| | ||||||||||| |||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagtag 159
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa
Indica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| |||||||||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtt 63
Query: 61 aatgaatctagaca 74
||||||||||||||
Sbjct: 64 aatgaatctagaca 77
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||||||||||||| |||||||||||| |||||||||| | |||| | |||
Sbjct: 77 tgtctagattcattaacatcactatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 139 aacggaggaagtag 152
|||||||| |||||
Sbjct: 17 aacggagggagtag 4
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 125/155 (80%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| |||||||||||| |||||
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtt 100
Query: 61 aatgaatctagac----aagtgtgtctagattcattaacatctatatgaatgtgggcaat 116
||||||||||||| | | | |||||||||||||||| ||||||||||||| |||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaat 40
Query: 117 gctagaaagtcttataacctgaaacggaggaagta 151
|||| || | |||| | ||||||||||||||||
Sbjct: 39 gctaaaatgacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 101/124 (81%), Gaps = 4/124 (3%)
Strand = Plus / Plus
Query: 33 tagcattgcccacattcatatagatgttaatgaatctagacaagtgt----gtctagatt 88
||||||| ||||||||||||| |||||||||||||||| | | | |||||||||
Sbjct: 36 tagcatttcccacattcatattagtgttaatgaatctagatagatatatatgtctagatt 95
Query: 89 cattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaa 148
||||||||| |||||||||||| |||||||||| | |||| | ||||||||||| |
Sbjct: 96 cattaacattaatatgaatgtggagaatgctagaatgacttacattgtgaaacggaggga 155
Query: 149 gtag 152
||||
Sbjct: 156 gtag 159
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacg 142
|||||||||||||||| |||||||||||| |||||||||| | |||||| |||||||
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacg 131
Query: 143 gaggaagta 151
|||| ||||
Sbjct: 132 gagggagta 140
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | |||||||||| |||||||||||| |||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 62 atgaatcta 70
|||||||||
Sbjct: 80 atgaatcta 72
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 90 attaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaag 149
|||||||| ||||||||||||| |||||||||| | |||| | ||||||||||||||
Sbjct: 66 attaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 150 ta 151
||
Sbjct: 6 ta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaat 63
|||||||||| ||||||||||||| ||||||||
Sbjct: 33 ttctagcatttcccacattcatattaatgttaat 66
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa Japonica
Group
Length = 128
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacg 142
|||||| ||||||||||| ||||||||| ||||| |||||||||||||| |||||||
Sbjct: 56 tagatttattaacatctaaatgaatgtgtgcaatattagaaagtcttatattgtgaaacg 115
Query: 143 gaggaagta 151
|||| ||||
Sbjct: 116 gagggagta 124
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||||||||||| ||||| ||||||||| |||||||||
Sbjct: 124 tactccctccgtttcacaatataagactttctaatattgcacacattcatttagatgtta 65
Query: 62 atgaatcta 70
|| ||||||
Sbjct: 64 ataaatcta 56
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatagat 57
||||||||| ||||||||||||||||||| |||||
Sbjct: 26 taagactttttagcattgcccacattcatttagat 60
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 96 atctatatgaatgtgggcaatgctagaaagtctta 130
||||| ||||||||||||||||||| |||||||||
Sbjct: 60 atctaaatgaatgtgggcaatgctaaaaagtctta 26
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 103/126 (81%), Gaps = 4/126 (3%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagac----aagtgtgtctag 85
||||| |||| ||||||||||||| ||| ||||||||||||||| | | | |||||
Sbjct: 33 ttctatcatttcccacattcatattgatattaatgaatctagacatatatatctatctag 92
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggag 145
|||||||||| |||||||||||| | |||||||||| | |||| | ||||||||||
Sbjct: 93 attcattaactaatatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 152
Query: 146 gaagta 151
||||||
Sbjct: 153 gaagta 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||| ||| ||||||||||||| |||| |||||
Sbjct: 77 tgtctagattcattaatatcaatatgaatgtgggaaatgatagaa 33
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||||||||| ||| ||||||||||||| ||| |||||| |||||| | |||
Sbjct: 86 tgtctagattcattaatatcaatatgaatgtgggaaatactagaatgtcttacattgtga 145
Query: 139 aacggaggaagta 151
|||||||| ||||
Sbjct: 146 aacggagggagta 158
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||| |||||| ||| ||||||||||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 62 atgaatctagaca 74
|||||||||||||
Sbjct: 98 atgaatctagaca 86
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 65.9 bits (33), Expect = 1e-10
Identities = 78/94 (82%), Gaps = 8/94 (8%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgtctagattc 89
|||||||||| |||||||||||| |||||||||| ||||||| | ||||| |
Sbjct: 33 ttctagcattttccacattcatattgatgttaatgtatctagata--------tagatac 84
Query: 90 attaacatctatatgaatgtgggcaatgctagaa 123
||||||||| ||||||||||||| ||||||||||
Sbjct: 85 attaacatcaatatgaatgtgggaaatgctagaa 118
Score = 65.9 bits (33), Expect = 1e-10
Identities = 78/94 (82%), Gaps = 8/94 (8%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgtctagattc 89
|||||||||| ||||||||||||| |||||||||| ||||| | ||||||| |
Sbjct: 118 ttctagcatttcccacattcatattgatgttaatgtatcta--------tatctagatac 67
Query: 90 attaacatctatatgaatgtgggcaatgctagaa 123
||||||||| |||||||||||| ||||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | ||||| ||||||||||||||||||| | ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgtta 64
Query: 62 atgaatcta 70
|||||||||
Sbjct: 65 atgaatcta 73
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacg 142
||||||||||||||||||| | ||||||||||||||||||| ||||| | |||||||
Sbjct: 73 tagattcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgtgaaacg 14
Query: 143 gaggaagta 151
|||| ||||
Sbjct: 13 gagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 94 acatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagtag 152
||||||| ||||||||| | ||||||||||||||||||| || ||||||||||||||
Sbjct: 81 acatctaaatgaatgtgagtaatgctagaaagtcttatattgtggaacggaggaagtag 139
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 21 tataagactttctagcattgcccacattcatatagatgt 59
||||||||||||||||||| | ||||||||| |||||||
Sbjct: 119 tataagactttctagcattactcacattcatttagatgt 81
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 65.9 bits (33), Expect = 1e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 95 catctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| |||||||||||||||||||||| | |||||||||| |||||
Sbjct: 61 catctatatgaatatgggcaatgctagaaagtcttacattatgaaacggagaaagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatagatg 58
|||||||||||||||||||||| |||||||||||||
Sbjct: 26 taagactttctagcattgcccatattcatatagatg 61
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 65.9 bits (33), Expect = 1e-10
Identities = 97/117 (82%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 36 cattgcccacattcatatagatgttaatgaatctagacaag-tgtgtctagattcattaa 94
|||| ||||||||||||| |||| |||| |||||||| | | | |||||||||||||
Sbjct: 121 catttcccacattcatattgatgccaatggatctagactatatctatctagattcattag 62
Query: 95 catctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||| ||||||||||||| ||| |||||| | |||||| ||||||||||||||||
Sbjct: 61 tatcaatatgaatgtgggaaatactagaatgacttatattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 96/117 (82%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | |||||| ||| ||||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 62 atgaatctagacaagtgt-gtctagattcattaacatctatatgaatgtgggcaatg 117
||||||||||| | | | |||||||| |||| |||| ||||||||||||| ||||
Sbjct: 65 atgaatctagatagatatagtctagatccattggcatcaatatgaatgtgggaaatg 121
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 65.9 bits (33), Expect = 1e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 84 agattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacgg 143
||||||||||| ||| || |||||||||| |||||||||| | |||||| ||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 144 aggaagtag 152
|||||||||
Sbjct: 128 aggaagtag 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| |||||| | |||||||||| |||||||||| || ||| ||
Sbjct: 136 ctacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatt 77
Query: 61 aatgaatct 69
|||||||||
Sbjct: 76 aatgaatct 68
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||||||||||||| ||||||||||| | ||| |||||| | |||| | |||
Sbjct: 77 tgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatga 18
Query: 139 aacggaggaagta 151
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaa 75
|||||| ||| | ||||||||||| |||||||||||||||||||||
Sbjct: 33 ttctagtatttctcacattcatattgatgttaatgaatctagacaa 78
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||||||||||||| |||||||| |||| ||||||| || | |||||| |||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtga 136
Query: 139 aacggaggaagta 151
|||||||| ||||
Sbjct: 137 aacggagggagta 149
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | || ||||||| |||| |||||||| |||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 62 atgaatctagaca 74
|||||||||||||
Sbjct: 89 atgaatctagaca 77
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaa 102
Score = 65.9 bits (33), Expect = 1e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatcta 70
|||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 102 ttctagcatttcccacattcatattgatgttaatgaatcta 62
Score = 44.1 bits (22), Expect = 5e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 90 attaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaag 149
||||||||| |||||||||||| ||||||| || | |||||| |||||| |||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaag 3
Query: 150 ta 151
||
Sbjct: 2 ta 1
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa Japonica
Group
Length = 118
Score = 65.9 bits (33), Expect = 1e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 99 tatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||| ||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 62 tatataaatgtggataatgctagaaagtcttataatatgaaacggaggaagta 114
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatataga 56
||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||
Sbjct: 4 ctactccctccgtttcatattataagactttatagcattatccacattcatataga 59
Score = 63.9 bits (32), Expect = 6e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 97 tctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagtag 152
||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||
Sbjct: 59 tctatatgaatgtggataatgctataaagtcttataatatgaaacggagggagtag 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatata 54
|||| ||||||||||| |||||||||||||||||||| ||||||| |||||
Sbjct: 114 tacttcctccgtttcatattataagactttctagcattatccacatttatata 62
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 65.9 bits (33), Expect = 1e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||||||||| || ||||||||||||| |||||||||| | |||| | |||
Sbjct: 63 tgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtga 122
Query: 139 aacggaggaagta 151
|||||||||||||
Sbjct: 123 aacggaggaagta 135
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagaca 74
|||||||||| ||||||||||||| || ||||||||||||||||
Sbjct: 107 ttctagcatttcccacattcatatttatattaatgaatctagaca 63
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 84 agattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacgg 143
|||||||||| |||| ||||||||||||| |||||||||| | |||| | ||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 144 aggaagta 151
||||||||
Sbjct: 12 aggaagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatct 69
|||||||||| ||||||||||||| |||| ||||||||||
Sbjct: 33 ttctagcatttcccacattcatattgatggtaatgaatct 72
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 90 attaacatctatatgaatgtgggcaatgctagaa 123
||||||||| ||||||||||||| ||||||||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaa 109
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaat 63
|||||||||| ||||||||||||| |||||||||
Sbjct: 109 ttctagcatttcccacattcatattgatgttaat 76
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
|||||||||||||||||| |||||||||| || |||||||||| | |||| | |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 141 cggaggaagtag 152
|||||| |||||
Sbjct: 113 cggagggagtag 124
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| || |||||||||| ||||||
Sbjct: 124 ctactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtt 65
Query: 61 aatgaatctaga 72
||||||||||||
Sbjct: 64 aatgaatctaga 53
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 84 agattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacgg 143
|||||||||| |||| ||||||||||| | |||||||||| | |||||| ||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 144 aggaagta 151
||||||||
Sbjct: 128 aggaagta 135
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | |||||||||| | ||||||||||| |||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 62 atgaatct 69
||||||||
Sbjct: 75 atgaatct 68
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 85 gattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacgga 144
|||||||||||||| ||||||||||||| ||||||| || | |||| | |||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 145 ggaagtag 152
||||||||
Sbjct: 128 ggaagtag 135
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 33 tagcattgcccacattcatatagatgttaatgaatc 68
||||||| ||||||||||||| ||||||||||||||
Sbjct: 103 tagcatttcccacattcatattgatgttaatgaatc 68
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| |||||||||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 61 aatgaatctaga 72
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
|||||||||||||||||| |||||||||||| |||||||||| | |||| | |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 141 cggaggaagtag 152
|||||| |||||
Sbjct: 15 cggagggagtag 4
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 88 tcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggagga 147
||||||||||| ||||||||||||| |||||||||| | |||| | ||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 148 agta 151
||||
Sbjct: 127 agta 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatga 65
|||||||||| ||||||||||||| |||||||||||
Sbjct: 102 ttctagcatttcccacattcatatcgatgttaatga 67
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaa 62
|||||||||| ||||||||||||| ||||||||
Sbjct: 33 ttctagcatttcccacattcatatcgatgttaa 65
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 91 ttaacatctatatgaatgtgggcaatgctagaa 123
|||||||| ||||||||||||| ||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaa 33
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||||||| | ||||||||||| ||||||||||||||||||
Sbjct: 33 ttctagcatttctcacattcatattgatgttaatgaatctaga 75
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaa 33
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
||||||||||||| ||| ||||||||||||| |||||||||| | |||||| |||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 141 cggaggaagta 151
|||||| ||||
Sbjct: 122 cggagggagta 132
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | |||||||||| ||||||||||||| ||| ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 62 atgaatctaga 72
|||||||||||
Sbjct: 72 atgaatctaga 62
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 100 atatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| |||||||||| | |||| | ||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 77 tgtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacct 136
||||| || ||||||||||||||||||| || || ||||||||| || |||||| | |
Sbjct: 63 tgtgtttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgt 122
Query: 137 gaaacggaggaagta 151
|||||||||||||||
Sbjct: 123 gaaacggaggaagta 137
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||| || ||||||||| || || |||||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
Query: 62 atgaat 67
||||||
Sbjct: 77 atgaat 72
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 110/136 (80%), Gaps = 4/136 (2%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| |||||||| |||| | ||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtt 63
Query: 61 aatgaatctagacaagtgtgtc----tagattcattaacatctatatgaatgtgggcaat 116
|||||||||||||| | | || |||||||||||| ||| ||||||||||| |||
Sbjct: 64 aatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaat 123
Query: 117 gctagaaagtcttata 132
||||||| | ||||||
Sbjct: 124 gctagaatgacttata 139
Score = 61.9 bits (31), Expect = 2e-09
Identities = 110/136 (80%), Gaps = 4/136 (2%)
Strand = Plus / Minus
Query: 21 tataagactttctagcattgcccacattcatatagatgttaatgaatcta----gacaag 76
|||||| | |||||||||| ||||||||||| ||| |||||||||||| || |
Sbjct: 139 tataagtcattctagcatttttcacattcatattgatattaatgaatctaaatagatata 80
Query: 77 tgtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacct 136
| |||||||||||||||||| | |||| |||||||| |||||||||| | |||| | |
Sbjct: 79 tatgtctagattcattaacaccaatataaatgtgggaaatgctagaatgacttacattgt 20
Query: 137 gaaacggaggaagtag 152
|||||||||| |||||
Sbjct: 19 gaaacggagggagtag 4
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||||||| | ||||||||||| ||||||||||||||||||
Sbjct: 33 ttctagcatttctcacattcatattgatgttaatgaatctaga 75
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||||| ||||||||||| | ||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaa 33
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggag 145
||||||||||||| |||||||||| || |||||||||| | |||| | ||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 146 gaagtag 152
|||||||
Sbjct: 109 gaagtag 115
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| || |||||||||| ||||||
Sbjct: 115 ctacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtt 56
Query: 61 aatgaat 67
|||||||
Sbjct: 55 aatgaat 49
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||||||| ||||||||||||| |||||||||| |||||||
Sbjct: 7 ttctagcatttcccacattcatattgatgttaatgtatctaga 49
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaa 123
||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaa 7
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaa 123
||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 75 tctagatacattaacatcaatatgaatgtgggaaatgctagaa 117
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||||||| ||||||||||||| |||||||||| |||||||
Sbjct: 117 ttctagcatttcccacattcatattgatgttaatgtatctaga 75
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 77 tgtgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacct 136
||||| || ||||||||||||||||||| || || ||||||||| || |||||| | |
Sbjct: 79 tgtgtttaaattcattaacatctatatgtatatgagcaatgctaaaatgtcttacattgt 20
Query: 137 gaaacggaggaagta 151
|||||||||||||||
Sbjct: 19 gaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| | |||||| || ||||||||| || || |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
Query: 62 atgaat 67
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 61.9 bits (31), Expect = 2e-09
Identities = 77/91 (84%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 32 ctagcattgcccacattcatatagatgttaatgaatctagacaagtgt-gtctagattca 90
|||||||| ||||| ||||||| ||| |||||||||||||| | | | ||||||||||
Sbjct: 1 ctagcatttcccacgttcatattgatattaatgaatctagatagatataatctagattca 60
Query: 91 ttaacatctatatgaatgtgggcaatgctag 121
|||| ||| ||||||| ||||| ||||||||
Sbjct: 61 ttaatatcaatatgaacgtgggaaatgctag 91
Score = 61.9 bits (31), Expect = 2e-09
Identities = 77/91 (84%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 32 ctagcattgcccacattcatatagatgttaatgaatctagacaag-tgtgtctagattca 90
|||||||| ||||| ||||||| ||| |||||||||||||| | | | ||||||||||
Sbjct: 91 ctagcatttcccacgttcatattgatattaatgaatctagattatatctatctagattca 32
Query: 91 ttaacatctatatgaatgtgggcaatgctag 121
|||| ||| ||||||| ||||| ||||||||
Sbjct: 31 ttaatatcaatatgaacgtgggaaatgctag 1
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | |||||||||| ||||||||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 62 atgaatctaga 72
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
||||||||||||| ||| ||||||||||||| |||||||||| | |||||| |||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 141 cggaggaagta 151
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 100 atatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| |||||||||| | |||| | ||||||||||||||||
Sbjct: 81 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
|||||||||||||||||| |||||||| | || |||||||||| | |||| | |||||
Sbjct: 75 tctagattcattaacatcaatatgaatataggaaatgctagaatgacttacattgtgaaa 16
Query: 141 cggaggaagta 151
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||||||| || | |||||||| ||||||||||||||||||
Sbjct: 33 ttctagcatttcctatattcatattgatgttaatgaatctaga 75
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 94 acatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagtag 152
||||| ||||||||||||| |||||||||| |||||| | |||||||||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagtag 133
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgt 59
||||| ||||||||||| | |||||| |||||||||| ||||||||||||| |||||
Sbjct: 133 ctacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 33 tagcattgcccacattcatatagatgttaatgaatctagaca 74
||||||| |||| ||| |||| |||| |||||||||||||||
Sbjct: 36 tagcatttcccatatttatattgatgctaatgaatctagaca 77
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgcta 120
||||||||||||||| |||| |||| ||| |||| |||||||
Sbjct: 77 tgtctagattcattagcatcaatataaatatgggaaatgcta 36
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaa 108
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctaga 72
||||| |||| ||||||||||||| ||||||||||||||||||
Sbjct: 108 ttctaacatttcccacattcatattgatgttaatgaatctaga 66
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 31 tctagcattgcccacattcatatagatgttaatgaatctaga 72
|||| |||| ||||||||||||| ||||||||||||||||||
Sbjct: 35 tctaacatttcccacattcatattgatgttaatgaatctaga 76
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctaga 122
|||||||||||||||||| ||||||||||||| |||| ||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttaga 35
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | ||| |||||| |||| |||||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 63
Query: 61 aatgaatctagaca 74
||||||||||||||
Sbjct: 64 aatgaatctagaca 77
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||||||||||||| |||||||| |||| |||||| ||| | |||| | |||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtga 18
Query: 139 aacggaggaagtag 152
|||||||| |||||
Sbjct: 17 aacggagggagtag 4
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 82 ctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaac 141
|||||||||||| |||| ||||||||||||| ||||||| || | |||| | ||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 142 ggaggaagta 151
||||||||||
Sbjct: 14 ggaggaagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 33 tagcattgcccacattcatatagatgttaatgaatctag 71
||||||| ||||||||||||| |||| ||||||||||||
Sbjct: 36 tagcatttcccacattcatattgatgctaatgaatctag 74
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttata 132
||||||||||||||| |||| ||||||||||| | |||||||||| | ||||||
Sbjct: 53 tgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgacttata 106
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 21 tataagactttctagcattgcccacattcatatagatgttaatgaatctagaca 74
|||||| | |||||||||| | ||||||||||| |||| |||||||||||||||
Sbjct: 106 tataagtcattctagcatttctcacattcatattgatgctaatgaatctagaca 53
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 100/123 (81%), Gaps = 4/123 (3%)
Strand = Plus / Minus
Query: 33 tagcattgcccacattcatatagatgttaatgaatctagacaagtgt----gtctagatt 88
||||||| | ||||| ||||| |||| ||||||||||||||| | | |||||||||
Sbjct: 127 tagcatttctcacatccatattgatgctaatgaatctagacatatatatccgtctagatt 68
Query: 89 cattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaa 148
|||||| || |||||||||||| |||||||||| | |||| | |||||||||||||
Sbjct: 67 cattaatataagtatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 149 gta 151
|||
Sbjct: 7 gta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 78/95 (82%), Gaps = 4/95 (4%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagac----aagtgtgtctag 85
|||||||||| |||||||||||| || ||||||||||||||| | | |||||||
Sbjct: 33 ttctagcatttcccacattcatacttatattaatgaatctagacggatatatatgtctag 92
Query: 86 attcattaacatctatatgaatgtgggcaatgcta 120
|||||||| |||| ||||| ||||| | |||||||
Sbjct: 93 attcattagcatcaatatggatgtgagaaatgcta 127
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 124/155 (80%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| |||||| | |||||||||| | | |||||||| |||| |
Sbjct: 159 ctactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgct 100
Query: 61 aatgaatctagacaagtgtgtcta----gattcattaacatctatatgaatgtgggcaat 116
|||||||||||||| | | |||| || ||||||||||| ||| |||||||| |||
Sbjct: 99 aatgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaat 40
Query: 117 gctagaaagtcttataacctgaaacggaggaagta 151
||||||| | |||| | ||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
||||||||||||||| |||| |||||||| | | |||||||||| | |||||| |||
Sbjct: 86 tgtctagattcattagcatcaatatgaatatagaaaatgctagaatgacttatattgtga 145
Query: 139 aacggaggaagtag 152
|||||||| |||||
Sbjct: 146 aacggagggagtag 159
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 60.0 bits (30), Expect = 9e-09
Identities = 64/75 (85%), Gaps = 4/75 (5%)
Strand = Plus / Plus
Query: 41 cccacattcatatagatgttaatgaatctagacaagtgt----gtctagattcattaaca 96
||||||||||||| ||| |||||||||||||| | | | |||||||||||||||||
Sbjct: 43 cccacattcatattgatattaatgaatctagatagatatatatgtctagattcattaaca 102
Query: 97 tctatatgaatgtgg 111
|| ||||||||||||
Sbjct: 103 tcaatatgaatgtgg 117
Score = 60.0 bits (30), Expect = 9e-09
Identities = 64/75 (85%), Gaps = 4/75 (5%)
Strand = Plus / Minus
Query: 42 ccacattcatatagatgttaatgaatctagac----aagtgtgtctagattcattaacat 97
|||||||||||| ||||||||||||||||||| | | | |||||||||||||| ||
Sbjct: 117 ccacattcatattgatgttaatgaatctagacatatatatctatctagattcattaatat 58
Query: 98 ctatatgaatgtggg 112
| |||||||||||||
Sbjct: 57 caatatgaatgtggg 43
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 82 ctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaac 141
|||||||||||| |||| ||||||||||||| ||||||| || | |||| | ||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 142 ggaggaagta 151
||||||||||
Sbjct: 134 ggaggaagta 143
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 33 tagcattgcccacattcatatagatgttaatgaatctag 71
||||||| ||||||||||||| |||| ||||||||||||
Sbjct: 112 tagcatttcccacattcatattgatgctaatgaatctag 74
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||||||||||||| |||||||| |||| |||||| ||| | |||| | |||
Sbjct: 84 tgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgacttacattgtga 143
Query: 139 aacggaggaagtag 152
|||||||| |||||
Sbjct: 144 aacggagggagtag 157
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | ||| |||||| |||| |||||||| ||||||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 98
Query: 61 aatgaatctagaca 74
||||||||||||||
Sbjct: 97 aatgaatctagaca 84
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 87 ttcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggagg 146
|||||||||||| ||||||||||||| |||||||||| | ||| | |||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 147 aagtag 152
||||||
Sbjct: 9 aagtag 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaa 66
|||||||||| ||||||||||||| ||||||||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaa 69
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 93 aacatctatatgaatgtgggcaatgctagaaagtctta 130
||||||||||||||| || |||||||||||||||||||
Sbjct: 50 aacatctatatgaatatgagcaatgctagaaagtctta 87
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatagatgtt 60
||||||||||||||||||| || |||||||||||||||
Sbjct: 87 taagactttctagcattgctcatattcatatagatgtt 50
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 58.0 bits (29), Expect = 4e-08
Identities = 97/121 (80%), Gaps = 9/121 (7%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagacaagtgtgtctagattc 89
|||||||||| ||| |||||||| |||||||||||||||||| |||||||
Sbjct: 117 ttctagcattttccatattcatattgatgttaatgaatctaga---------ctagattt 67
Query: 90 attaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaag 149
||||||||| |||| |||||| | |||||||||| | |||| | ||||||||||||||
Sbjct: 66 attaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaag 7
Query: 150 t 150
|
Sbjct: 6 t 6
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 80 gtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 74 gtctagattcattaacatcaatatgaatatggaaaatgctagaa 117
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||| |||||||||||| |||||||||||| ||||| |||| | |||||| |||
Sbjct: 77 tgtctaaattcattaacatgagtatgaatgtgggaaatgccagaatgacttatattgtga 18
Query: 139 aacggaggaagta 151
|||||||||||||
Sbjct: 17 aacggaggaagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | |||| ||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 62 atgaatctagaca 74
|||||| ||||||
Sbjct: 65 atgaatttagaca 77
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||| |||| || ||||||||||||| ||||||||||
Sbjct: 86 tgtctagattcactaacctccatatgaatgtgggaaatgctagaa 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagaca 74
|||||||||| ||||||||||||| || |||| ||||||||||||
Sbjct: 130 ttctagcatttcccacattcatatggaggttagtgaatctagaca 86
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||| ||||| ||||||||||| | ||||||||||
Sbjct: 86 tgtctagattcattgacatcaatatgaatgtgagaaatgctagaa 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagaca 74
|||||||||| | ||||||||||| ||||| ||||||||||||||
Sbjct: 130 ttctagcatttctcacattcatattgatgtcaatgaatctagaca 86
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagaca 74
||||| |||| ||||||||||||| ||| ||||||||||||||||
Sbjct: 33 ttctaacatttcccacattcatattgatattaatgaatctagaca 77
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||| ||| ||||||||||||| |||| |||||
Sbjct: 77 tgtctagattcattaatatcaatatgaatgtgggaaatgttagaa 33
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa Japonica
Group
Length = 109
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 99 tatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||| ||| |||||||||||||||||||| ||| ||||||||||||
Sbjct: 53 tatatgaatatggacaatgctagaaagtcttatattatgagacggaggaagta 105
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 21 tataagactttctagcattgcccacattcatata 54
|||||||||||||||||||| ||| |||||||||
Sbjct: 86 tataagactttctagcattgtccatattcatata 53
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 112 gcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||||||||||| | ||||||||||||||
Sbjct: 44 gcaatgctagaaagtcttatattataaaacggaggaagta 5
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagaca 74
|||||||||| | || |||||||| ||||||||||||||||||||
Sbjct: 33 ttctagcatttctcatattcatattgatgttaatgaatctagaca 77
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||||||| |||||||| || | ||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgagaaatgctagaa 33
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 43 cacattcatatagatgttaatgaatctagacaa 75
||||||||||| |||||||||||||||||||||
Sbjct: 106 cacattcatattgatgttaatgaatctagacaa 74
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtg 110
|||||||||||||||||||| |||||||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtg 106
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacg 142
|||||||||||||||| |||||||||||| ||| ||| || | |||||| |||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 143 gaggaagta 151
|||||||||
Sbjct: 122 gaggaagta 130
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 42 ccacattcatatagatgttaatgaatcta 70
|||||||||||| ||||||||||||||||
Sbjct: 90 ccacattcatattgatgttaatgaatcta 62
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 100 atatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagtag 152
||||||||||||| |||||||||| | |||||| |||||||||||||||||
Sbjct: 63 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtag 115
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatat 53
||||| ||||||||||| |||||| | |||||||||| |||||||||||||
Sbjct: 115 ctacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 63
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 75/90 (83%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 35 gcattgcccacattcatatagatgttaatgaatctagacaagtgtgtcta----gattca 90
||||| |||||||| |||| |||||| ||||||||||||| | | |||| ||||||
Sbjct: 38 gcatttcccacatttatattgatgtttatgaatctagacatatatttctatctagattca 97
Query: 91 ttaacatctatatgaatgtgggcaatgcta 120
|||||||| |||| |||||||| |||||||
Sbjct: 98 ttaacatcaatataaatgtgggaaatgcta 127
Score = 58.0 bits (29), Expect = 4e-08
Identities = 75/90 (83%), Gaps = 4/90 (4%)
Strand = Plus / Minus
Query: 33 tagcattgcccacattcatatagatgttaatgaatc----tagacaagtgtgtctagatt 88
||||||| |||||||| |||| |||||||||||||| |||| | | ||||||||||
Sbjct: 127 tagcatttcccacatttatattgatgttaatgaatctagatagaaatatatgtctagatt 68
Query: 89 cattaacatctatatgaatgtgggcaatgc 118
||| |||||| |||| |||||||| |||||
Sbjct: 67 cataaacatcaatataaatgtgggaaatgc 38
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| ||||||||||||| |||| |
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 63
Query: 61 aatgaatc 68
||||||||
Sbjct: 64 aatgaatc 71
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 85 gattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacgga 144
||||||||| |||| ||||||||||||| |||||||||| | |||| | |||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 145 ggaagtag 152
|| |||||
Sbjct: 11 gggagtag 4
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 85 gattcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaa 110
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatc 68
|||||||||| ||||||||||||| |||| |||||||||
Sbjct: 110 ttctagcatttcccacattcatattgatgctaatgaatc 72
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 100 atatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| |||||||||| | |||||| ||||||||||||||||
Sbjct: 85 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatat 53
|||| ||||||||||| |||||| | |||||||||| |||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 85
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 100 atatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| |||||||||| | |||||| ||||||||||||||||
Sbjct: 68 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatat 53
|||| ||||||||||| |||||| | |||||||||| |||||||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 68
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 25 agactttctagcattgcccacattcatatagatgttaatg 64
|||||||| ||||||||||| ||||||||||||| |||||
Sbjct: 57 agactttcaagcattgcccatattcatatagatgctaatg 96
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 89 cattaacatctatatgaatgtgggcaatgctagaaagtct 128
||||| ||||||||||||| ||||||||||| ||||||||
Sbjct: 96 cattagcatctatatgaatatgggcaatgcttgaaagtct 57
Score = 54.0 bits (27), Expect = 6e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 97 tctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||| || |||||||| |||||||||||| |||||| |||||||||
Sbjct: 59 tctatatgaatatgtgcaatgcttgaaagtcttatagtatgaaacagaggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 21 tataagactttctagcattgcccacattcatataga 56
|||||||||||| |||||||| || |||||||||||
Sbjct: 24 tataagactttcaagcattgcacatattcatataga 59
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 100 atatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| |||||||||| | |||||| ||||||||||||||||
Sbjct: 85 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatat 53
|||| ||||||||||| |||||| | |||||||||| |||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 85
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 56.0 bits (28), Expect = 1e-07
Identities = 102/126 (80%), Gaps = 3/126 (2%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | ||||| |||| |||| ||| |||| |||||
Sbjct: 158 ctactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtt 99
Query: 61 aatgaatctagaca---agtgtgtctagattcattaacatctatatgaatgtgggcaatg 117
|||||||||||| | | | | ||||||||||||| |||| ||||||||||| | ||||
Sbjct: 98 aatgaatctagatatatattctatctagattcattaccatcaatatgaatgtgagaaatg 39
Query: 118 ctagaa 123
||||||
Sbjct: 38 ctagaa 33
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||||||| | ||||||||||| |||| |||||||||||||
Sbjct: 33 ttctagcatttctcacattcatattgatggtaatgaatctaga 75
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
|||||||||||||||||| ||||||||||| |||| ||||| | |||| | |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 141 cggaggaagtag 152
||||||||||||
Sbjct: 120 cggaggaagtag 131
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 43 cacattcatatagatgttaatgaatctaga 72
||||||||||| ||||||||||||||||||
Sbjct: 89 cacattcatattgatgttaatgaatctaga 60
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatat 53
|||| ||||||||||| |||||| | |||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 100 atatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| |||||||||| | |||||| ||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
||||||||||||| |||| ||||||||||| |||||||||| | |||||| |||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaa 16
Query: 141 cggaggaagta 151
| |||||||||
Sbjct: 15 cagaggaagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 21 tataagactttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||| | |||||||||| ||||||||||| |||| |||||||||||||
Sbjct: 24 tataagtcattctagcattttccacattcatactgatgctaatgaatctaga 75
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggag 145
||||||||| ||| |||||||||| || |||||||||| | |||| | ||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 146 gaagtag 152
|||||||
Sbjct: 121 gaagtag 127
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| || |||||||||| ||| ||
Sbjct: 127 ctacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatt 68
Query: 61 aatgaat 67
|||||||
Sbjct: 67 aatgaat 61
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 84 agattcattaacatctatatgaatgtgggcaatgctagaaagtctta 130
||||||||||||||||| || ||||||| |||| |||||||| ||||
Sbjct: 51 agattcattaacatctaaataaatgtggacaatactagaaagcctta 97
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatagatgttaatgaatct 69
|||| |||||||| |||| ||||||| || |||||||||||||||||
Sbjct: 97 taaggctttctagtattgtccacatttatttagatgttaatgaatct 51
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 81 tctagattcattaacatctatatgaatgtgg 111
|||||||||||||||||| ||||||||||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgg 90
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 42 ccacattcatatagatgttaatgaatctaga 72
|||||||||||| ||||||||||||||||||
Sbjct: 90 ccacattcatattgatgttaatgaatctaga 60
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctaga 72
||||| |||| | ||||||||||| ||||||||||||||||||
Sbjct: 33 ttctaccatttctcacattcatattgatgttaatgaatctaga 75
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||||||| ||||||||||| | |||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatggtagaa 33
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 54.0 bits (27), Expect = 6e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggag 145
||||||||||||| |||||||| ||| |||||||||| | |||| | ||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 146 gaagtag 152
|||||||
Sbjct: 10 gaagtag 4
Score = 46.1 bits (23), Expect = 1e-04
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| ||| |||||||| ||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 61 aatgaat 67
|||||||
Sbjct: 64 aatgaat 70
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatc 68
|||||||||| ||||||||||||| |||| |||||||||
Sbjct: 7 ttctagcatttcccacattcatattgatgctaatgaatc 45
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 85 gattcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaa 7
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 85 gattcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||| |||| ||||||||||||| ||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaa 84
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatc 68
|||||||||| ||||||||||||| |||| |||||||||
Sbjct: 84 ttctagcatttcccacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||||||| | ||||||||||| ||| ||||||||||||||
Sbjct: 33 ttctagcatttctcacattcatattgatattaatgaatctaga 75
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||| ||| ||||||||||| | ||||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaa 33
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 89 cattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaa 148
|||| ||||| |||||||| |||| |||||||||| | |||| | |||||||||||||
Sbjct: 80 cattgacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaa 139
Query: 149 gta 151
|||
Sbjct: 140 gta 142
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
||||||||||||||||| |||||||| ||| |||||||||| | |||| | |||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 141 cggaggaagta 151
|||||||||||
Sbjct: 124 cggaggaagta 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 106 ttctagcattttccatattcatattaatgttaatgaatctaga 64
>RF00756;mir-299;AP008215.1/6009697-6009759 39947:Oryza sativa
Japonica Group
Length = 63
Score = 54.0 bits (27), Expect = 6e-07
Identities = 61/72 (84%), Gaps = 9/72 (12%)
Strand = Plus / Plus
Query: 41 cccacattcatatagatgttaatgaatctagacaagtgtgtctagattcattaacatcta 100
||||||| |||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 1 cccacatacatatagatgttaatgaatcta------tgt---tagattcattaacatcta 51
Query: 101 tatgaatgtggg 112
|||| |||||||
Sbjct: 52 tatgtatgtggg 63
Score = 54.0 bits (27), Expect = 6e-07
Identities = 61/72 (84%), Gaps = 9/72 (12%)
Strand = Plus / Minus
Query: 41 cccacattcatatagatgttaatgaatctagacaagtgtgtctagattcattaacatcta 100
||||||| |||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 63 cccacatacatatagatgttaatgaatcta-aca--------tagattcattaacatcta 13
Query: 101 tatgaatgtggg 112
|||| |||||||
Sbjct: 12 tatgtatgtggg 1
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||| ||||||||||||||||| ||||||||||
Sbjct: 93 attcattagcatctatatgaatgtggaaaatgctagaa 130
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaat 67
|||||||||| ||||||||||||||||| ||||||||
Sbjct: 130 ttctagcattttccacattcatatagatgctaatgaat 93
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 52.0 bits (26), Expect = 2e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
|||||||||||||||||| |||||| ||| | | ||| |||||| | |||||| |||
Sbjct: 67 tgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatattgtga 126
Query: 139 aacggaggaagtag 152
||||||||||||||
Sbjct: 127 aacggaggaagtag 140
Score = 44.1 bits (22), Expect = 5e-04
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| |||||| | |||||| ||| | | ||| |||||| ||||
Sbjct: 140 ctacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtt 81
Query: 61 aatgaatctagaca 74
||||||||||||||
Sbjct: 80 aatgaatctagaca 67
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 86 attcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggag 145
||||||||||| | ||||||||||| | |||||||||| | |||| | ||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 146 gaagta 151
||||||
Sbjct: 10 gaagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaat 67
|||||||||| | ||||||||||| | |||||||||||
Sbjct: 33 ttctagcatttctcacattcatattgctgttaatgaat 70
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 87 ttcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggagg 146
|||||||||||| |||| |||||||| ||| |||||| | |||| | |||||||||||
Sbjct: 87 ttcattaacatcaatataaatgtgggaaatactagaatgacttacattgtgaaacggagg 146
Query: 147 aagtag 152
||||||
Sbjct: 147 aagtag 152
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | ||||| ||| ||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 62 atgaa 66
|||||
Sbjct: 65 atgaa 69
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 87 ttcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggagg 146
|||||||||||| ||||||||||||| ||| ||||| | |||||| |||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaataatagaatgacttatattgtgaaacggagg 10
Query: 147 aagta 151
||||
Sbjct: 9 gagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||| ||| |||||||| |||| ||||||
Sbjct: 152 ctacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtt 93
Query: 61 aatgaa 66
||||||
Sbjct: 92 aatgaa 87
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||| |||| ||||||||||| | ||||||||||
Sbjct: 66 tgtctagattcattgacataaatatgaatgtgagaaatgctagaa 110
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagaca 74
|||||||||| | ||||||||||| |||| ||||||||||||||
Sbjct: 110 ttctagcatttctcacattcatatttatgtcaatgaatctagaca 66
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa
Indica Group
Length = 156
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| |||||||||||| ||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtt 63
Query: 61 aatga 65
|||||
Sbjct: 64 aatga 68
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 88 tcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggagga 147
||||||||||| |||||||||||| |||||||||| | |||| | |||||||||||
Sbjct: 68 tcattaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggg 9
Query: 148 agtag 152
|||||
Sbjct: 8 agtag 4
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 80 gtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaa 139
|||||||||||||| |||| |||||||| |||| ||| |||||| | |||| | ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 140 acggaggaagtag 152
||||||| |||||
Sbjct: 125 acggagggagtag 137
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||| ||| |||| |||||||| |||| |
Sbjct: 137 ctactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgct 78
Query: 61 aatgaatctagac 73
|||||||||||||
Sbjct: 77 aatgaatctagac 65
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagaca 74
|||||||||| |||||||||||| |||| ||||||||||||||
Sbjct: 33 ttctagcattttccacattcatatcgatgccaatgaatctagaca 77
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||| |||| |||||||||||| ||||||||||
Sbjct: 77 tgtctagattcattggcatcgatatgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 50.1 bits (25), Expect = 9e-06
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
||||||||||||||| | ||||||||||||| |||||||||| | |||| | |||
Sbjct: 58 tgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacattgtga 117
Query: 139 aacggaggaagta 151
|||||||||||||
Sbjct: 118 aacggaggaagta 130
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 37 attgcccacattcatatagatgttaatgaatctagac 73
|||||||| || ||||||||| |||||||||||||||
Sbjct: 40 attgcccatatgcatatagatattaatgaatctagac 76
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 80 gtctagattcattaacatctatatgaatgtgggcaat 116
||||||||||||||| ||||||||| || ||||||||
Sbjct: 76 gtctagattcattaatatctatatgcatatgggcaat 40
Score = 48.1 bits (24), Expect = 3e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 96 atctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
|||||||||||||| | ||||||||||| | |||| | ||||||||||||||||
Sbjct: 81 atctatatgaatgtagacaatgctagaatgacttacattatgaaacggaggaagta 136
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctagaca 74
|||||||||| |||||||||||| |||| ||||||||||||||
Sbjct: 33 ttctagcattttccacattcatatcgatgccaatgaatctagaca 77
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||||||||| |||| |||||||||||| ||||||||||
Sbjct: 77 tgtctagattcattggcatcgatatgaatgtggaaaatgctagaa 33
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 48.1 bits (24), Expect = 3e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctga 138
||||||||||||||| |||| |||||||| || ||||||| || | |||||| |||
Sbjct: 60 tgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtga 119
Query: 139 aacggaggaagt 150
||||||||||||
Sbjct: 120 aacggaggaagt 131
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 101 tatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagtag 152
|||||||||||| |||||||||| | |||| | |||||||||||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtag 96
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatat 53
|||| ||||||||||| |||||| | |||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 48.1 bits (24), Expect = 3e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 100 atatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||||||||||| |||||||||| | |||||| ||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 5e-04
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 100 atatgaatgtgggcaatgctagaaagtcttataacctg-aaacggaggaagtag 152
||||||||||||| |||||||||| | |||||| || |||||||||||||||
Sbjct: 64 atatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagtag 117
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||||||| ||||||||||| |||| |||||||||||||
Sbjct: 33 ttctagcatttttcacattcatattgatgctaatgaatctaga 75
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaa 123
||||||||||||| |||| ||||||||||| ||||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaa 33
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
|||| ||||||||||||| |||||||| ||| |||| ||||| | |||| | |||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 141 cggaggaagta 151
|||||||||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 36 cattgcccacattcatatagatgttaatgaatctagaca 74
|||| ||||||||||||| |||| ||||||| |||||||
Sbjct: 5 catttcccacattcatattgatgctaatgaaactagaca 43
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatg 117
||||||| ||||||| |||| ||||||||||||| ||||
Sbjct: 43 tgtctagtttcattagcatcaatatgaatgtgggaaatg 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 79 tgtctagattcattaacatctatatgaatgtgggcaatg 117
|||||||||| |||| |||| ||||||||||||| ||||
Sbjct: 74 tgtctagatttattagcatcaatatgaatgtgggaaatg 112
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 36 cattgcccacattcatatagatgttaatgaatctagaca 74
|||| ||||||||||||| |||| |||| ||||||||||
Sbjct: 112 catttcccacattcatattgatgctaataaatctagaca 74
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
||||||||||||| |||| |||| ||||||| ||||||| || | |||||| |||||
Sbjct: 82 tctagattcattagcatcaatataaatgtggaaaatgctaaaatgacttatattgtgaaa 141
Query: 141 cggaggaagta 151
|||||| ||||
Sbjct: 142 cggagggagta 152
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 2 tactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtta 61
|||| ||||||||||| |||||| | || ||||||| ||||||| |||| |||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 62 atgaatctaga 72
|||||||||||
Sbjct: 92 atgaatctaga 82
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaa 123
|||||||| ||||||||| |||||||||||| ||| ||||||
Sbjct: 74 tctagatttattaacatcactatgaatgtgggaaatactagaa 116
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatagatgttaatgaatctaga 72
|||||| ||| |||||||||||| ||||||||| ||||||||
Sbjct: 116 ttctagtatttcccacattcatagtgatgttaataaatctaga 74
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaa 140
||||||||||||| |||| |||| ||| || | ||| |||||| | |||||| |||||
Sbjct: 75 tctagattcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaa 16
Query: 141 cggaggaagta 151
|||||||||||
Sbjct: 15 cggaggaagta 5
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 86 attcattaacatctatatgaatgtgggcaatgcta 120
|||||||| |||| ||||||||||||| |||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgcta 83
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 33 tagcattgcccacattcatatagatgttaatgaat 67
||||||| ||||||||||||| |||| ||||||||
Sbjct: 83 tagcatttcccacattcatattgatgctaatgaat 49
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 94 acatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagtag 152
||||| ||||||||||| | |||||||||| | |||| | |||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagtag 4
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 46 attcatatagatgttaatgaatctaga 72
|||||||| ||||||||||||||||||
Sbjct: 49 attcatattgatgttaatgaatctaga 75
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 81 tctagattcattaacatctatatgaat 107
|||||||||||||||||| ||||||||
Sbjct: 75 tctagattcattaacatcaatatgaat 49
Score = 44.1 bits (22), Expect = 5e-04
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 90 attaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaag 149
||||||||| |||||||||| || ||| ||||| | |||||| ||||||||||||||
Sbjct: 77 attaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaag 136
Query: 150 ta 151
||
Sbjct: 137 ta 138
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 44.1 bits (22), Expect = 5e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 83 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacg 142
|||||||||||| ||| |||||||| || | |||||||||| | |||| | |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 143 gaggaagtag 152
|||| |||||
Sbjct: 118 gagggagtag 127
Score = 44.1 bits (22), Expect = 5e-04
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 1 ctactacctccgtttcaggttataagactttctagcattgcccacattcatatagatgtt 60
||||| ||||||||||| | |||| | |||||||||| | || |||||||| ||| ||
Sbjct: 127 ctactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatt 68
Query: 61 aatgaatcta 70
||||||||||
Sbjct: 67 aatgaatcta 58
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 44.1 bits (22), Expect = 5e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 94 acatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggaagta 151
||||| |||||||||||| |||||||||| | |||| | ||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 5
