miRNEST 2.0, an integrative microRNA resource :: BLAST
>45731_miR446:micropc
Length = 86
Score = 113 bits (57), Expect = 4e-26
Identities = 78/85 (91%)
Strand = Plus / Minus
Query: 36 cattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctagattcat 95
|||||||||||||||||| ||||||||| |||||| ||||||||||||| |||||||||
Sbjct: 86 cattgcccacattcatattgatgttaatgaatctagacacacatatatgtttagattcat 27
Query: 96 taacatatatatgaatgtggacaat 120
||| || ||||||||||||||||||
Sbjct: 26 taaaatctatatgaatgtggacaat 2
Score = 65.9 bits (33), Expect = 8e-12
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 36 cattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctagattcat 95
||||| ||||||||||||| || |||||| ||||| || | || | |||||||||||||
Sbjct: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
Query: 96 taacatatatatgaatgtggacaat 120
|||||| |||||||||||| ||||
Sbjct: 61 taacatcaatatgaatgtgggcaat 85
>45260_miR819:micropc
Length = 116
Score = 111 bits (56), Expect = 2e-25
Identities = 103/118 (87%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 20 ttataagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacat 79
|||||||||||||||| || | ||| ||| ||||| ||||||||| || ||| ||||||
Sbjct: 116 ttataagactttctagtatngtccatatttatatagatgttaatgaatatag--acacat 59
Query: 80 atatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataa 137
|||||| ||||||||||||||||||||||||| |||| ||| | ||||||||||||||
Sbjct: 58 atatgtttagattcattaacatatatatgaatatggataatgctagaaagtcttataa 1
Score = 111 bits (56), Expect = 2e-25
Identities = 103/118 (87%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 20 ttataagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacat 79
|||||||||||||||||||| ||| ||||||||||||||||||| ||||| ||| ||
Sbjct: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatcta--aacatat 58
Query: 80 atatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataa 137
|| |||||| |||||||||||| ||||| ||| ||||| |||| ||||||||||||||
Sbjct: 59 atgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
>45075_miR819:micropc
Length = 116
Score = 111 bits (56), Expect = 2e-25
Identities = 103/118 (87%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 20 ttataagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacat 79
|||||||||||||||| || | ||| ||| ||||| ||||||||| || ||| ||||||
Sbjct: 116 ttataagactttctagtatngtccatatttatatagatgttaatgaatatag--acacat 59
Query: 80 atatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataa 137
|||||| ||||||||||||||||||||||||| |||| ||| | ||||||||||||||
Sbjct: 58 atatgtttagattcattaacatatatatgaatatggataatgctagaaagtcttataa 1
Score = 111 bits (56), Expect = 2e-25
Identities = 103/118 (87%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 20 ttataagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacat 79
|||||||||||||||||||| ||| ||||||||||||||||||| ||||| ||| ||
Sbjct: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaa--acatat 58
Query: 80 atatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataa 137
|| |||||| |||||||||||| ||||| ||| ||||| |||| ||||||||||||||
Sbjct: 59 atgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
>44978_miR1130:micropc
Length = 144
Score = 105 bits (53), Expect = 1e-23
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||||||||| ||||||| ||||||||| ||||| ||||| |||||||||||
Sbjct: 17 taagactttctagcattgtccacatttatatatatgctaatgaatctaagcacacatata 76
Query: 83 tgtctagattcattaacatatatatgaat 111
||| |||||| ||| |||| |||||||||
Sbjct: 77 tgtttagatttattgacatctatatgaat 105
Score = 63.9 bits (32), Expect = 3e-11
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 87 tagattcattaacatatatatgaatgtggacaatacgagaaagtctta 134
||||||||||| ||||||||| |||||||||||| | |||||||||||
Sbjct: 64 tagattcattagcatatatataaatgtggacaatgctagaaagtctta 17
>45687_miR819:micropc
Length = 84
Score = 89.7 bits (45), Expect = 6e-19
Identities = 45/45 (100%)
Strand = Plus / Minus
Query: 20 ttataagactttctagcattgcccacattcatatatatgttaatg 64
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 ttataagactttctagcattgcccacattcatatatatgttaatg 35
Score = 71.9 bits (36), Expect = 1e-13
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 90 attcattaacatatatatgaatgtggacaatacgagaaagtcttataa 137
|||||||||||||||||||||||||| |||| | ||||||||||||||
Sbjct: 32 attcattaacatatatatgaatgtgggcaatgctagaaagtcttataa 79
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 15 tcaggttataagactttctagcattgcccacattcat 51
||||||||||||||||||| ||||| | |||||||||
Sbjct: 1 tcaggttataagactttctggcattactcacattcat 37
>46670_miR809:micropc
Length = 97
Score = 87.7 bits (44), Expect = 2e-18
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 56 atgttaatgcatctaggcacacatatatgtctagattcattaacatatatatgaatgtgg 115
|||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 26 atgttaataaatctagacacacatatatgtctacattcattaacatatatatgaatgtgg 85
Score = 63.9 bits (32), Expect = 3e-11
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
||||| |||| |||||||||||||||||||||||| || ||| || | || | |||||||
Sbjct: 97 ttctaacattacccacattcatatatatgttaatgaatgtagacatatatgtgtgtctag 38
Query: 90 attcattaacat 101
||| ||||||||
Sbjct: 37 atttattaacat 26
>44980_miR808:micropc
Length = 97
Score = 87.7 bits (44), Expect = 2e-18
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 56 atgttaatgcatctaggcacacatatatgtctagattcattaacatatatatgaatgtgg 115
|||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 26 atgttaataaatctagacacacatatatgtctacattcattaacatatatatgaatgtgg 85
Score = 63.9 bits (32), Expect = 3e-11
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
||||| |||| |||||||||||||||||||||||| || ||| || | || | |||||||
Sbjct: 97 ttctaacattacccacattcatatatatgttaatgaatgtagacatatatgtgtgtctag 38
Query: 90 attcattaacat 101
||| ||||||||
Sbjct: 37 atttattaacat 26
>45603_miR819:micropc
Length = 61
Score = 77.8 bits (39), Expect = 2e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 15 tcaggttataagactttctagcattgcccacattcatat 53
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcaggttataagactttctagcattgcccacattcatat 39
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 104 atatgaatgtggacaatacgagaaagtcttataacctga 142
|||||||||||| |||| | |||||||||||||||||||
Sbjct: 39 atatgaatgtgggcaatgctagaaagtcttataacctga 1
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 tcaggttataagactttctagcat 38
||||||||||||||||||||||||
Sbjct: 61 tcaggttataagactttctagcat 38
>45215_miR1120:micropc
Length = 142
Score = 77.8 bits (39), Expect = 2e-15
Identities = 102/123 (82%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||| |||||| |||||| || || |||||| ||||||||| ||
Sbjct: 142 ctccgtttcataatataagaatttctaacattgctcatatacatatagatgttaatgaat 83
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtggacaatacgagaa 127
|| |||| | |||| |||||||||||||||||||| ||||| |||| |||| | ||||
Sbjct: 82 ttaaacacataaatatatctagattcattaacatataaatgaacgtgggcaatgctagaa 23
Query: 128 agt 130
|||
Sbjct: 22 agt 20
Score = 67.9 bits (34), Expect = 2e-12
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 27 actttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtc 86
||||||||||||||||||| ||||| |||||||||||| |||||| | | ||| |||
Sbjct: 20 actttctagcattgcccacgttcatttatatgttaatgaatctagatatatttatgtgtt 79
Query: 87 tagattcattaacatatatatg 108
|| |||||||||||| ||||||
Sbjct: 80 taaattcattaacatctatatg 101
>46464_miR1132:micropc
Length = 149
Score = 73.8 bits (37), Expect = 3e-14
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 27 actttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtc 86
||||||||||||||| || ||||||||| || |||||| ||||||||| | |||| |||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 87 tagattcattaac 99
|||||||||||||
Sbjct: 83 tagattcattaac 95
Score = 61.9 bits (31), Expect = 1e-10
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 29 tttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtcta 88
||||||||| | |||| ||| ||||| | ||||||| ||||| |||| ||||||| |||
Sbjct: 124 tttctagcactacccatatttatatagaagttaatgaatctaaacacatatatatgccta 65
Query: 89 gattcattaacatatatatgaat 111
|||||||||| || |||||||||
Sbjct: 64 gattcattaatatctatatgaat 42
>45514_miR1132:micropc
Length = 149
Score = 73.8 bits (37), Expect = 3e-14
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 27 actttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtc 86
||||||||||||||| || ||||||||| || |||||| ||||||||| | |||| |||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 87 tagattcattaac 99
|||||||||||||
Sbjct: 83 tagattcattaac 95
Score = 61.9 bits (31), Expect = 1e-10
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 29 tttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtcta 88
||||||||| | |||| ||| ||||| | ||||||| ||||| |||| ||||||| |||
Sbjct: 124 tttctagcactacccatatttatatagaagttaatgaatctaaacacatatatatgccta 65
Query: 89 gattcattaacatatatatgaat 111
|||||||||| || |||||||||
Sbjct: 64 gattcattaatatctatatgaat 42
>45099_miR1132:micropc
Length = 149
Score = 73.8 bits (37), Expect = 3e-14
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 27 actttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtc 86
||||||||||||||| || ||||||||| || |||||| ||||||||| | |||| |||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 87 tagattcattaac 99
|||||||||||||
Sbjct: 83 tagattcattaac 95
Score = 61.9 bits (31), Expect = 1e-10
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 29 tttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtcta 88
||||||||| | |||| ||| ||||| | ||||||| ||||| |||| ||||||| |||
Sbjct: 124 tttctagcactacccatatttatatagaagttaatgaatctaaacacatatatatgccta 65
Query: 89 gattcattaacatatatatgaat 111
|||||||||| || |||||||||
Sbjct: 64 gattcattaatatctatatgaat 42
>44937_miR819:micropc
Length = 94
Score = 67.9 bits (34), Expect = 2e-12
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 67 tctaggcacacatatatgtctagattcattaac--atatatatgaatgtggacaatacga 124
||||||||||||||||||| |||| |||||||| |||||||| ||| ||| ||||| |
Sbjct: 17 tctaggcacacatatatgtatagactcattaacatatatatataaatatgggcaataata 76
Query: 125 gaaagtcttataa 137
|||||||||||||
Sbjct: 77 gaaagtcttataa 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 20 ttataagactttctagcattgcccacattcatatatat 57
||||||||||||||| |||||||| ||| ||||||||
Sbjct: 89 ttataagactttctattattgcccatatttatatatat 52
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 15 tcaggttataagactttctag 35
|||||||||||||||||||||
Sbjct: 1 tcaggttataagactttctag 21
>46801_miR809:micropc
Length = 110
Score = 63.9 bits (32), Expect = 3e-11
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
||||| |||| ||||||||||||| ||||||||| |||||| | | |||||||| |||
Sbjct: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
Query: 90 attcattaacat 101
||||||||||||
Sbjct: 62 attcattaacat 73
Score = 48.1 bits (24), Expect = 2e-06
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 56 atgttaatgcatctaggcacacatatatgtctagattcattaacatatatatgaatgtgg 115
||||||||| ||||| || | |||| | ||||||||||||||||| ||||||||||||
Sbjct: 73 atgttaatgaatctaaacatatatatctatctagattcattaacattaatatgaatgtgg 14
>46637_miR446:micropc
Length = 80
Score = 60.0 bits (30), Expect = 5e-10
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 41 cccacattcatatatatgttaatgcatctaggcacacatatatgtctagattcattaaca 100
|||| |||||||| ||||||||| |||||| | | |||||||||||||||||||||||
Sbjct: 77 cccatattcatattgatgttaatgaatctagctagatatatatgtctagattcattaaca 18
Query: 101 tatatatgaa 110
| |||||||
Sbjct: 17 ttaatatgaa 8
Score = 42.1 bits (21), Expect = 1e-04
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 47 ttcatatatatgttaatgcatctaggcacacatatatgtctagattcattaacatatata 106
||||||| ||||||||| |||||| || | |||| | |||||||||||||||| |||
Sbjct: 8 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 67
Query: 107 tgaat 111
|||||
Sbjct: 68 tgaat 72
>46833_miR446:micropc
Length = 81
Score = 58.0 bits (29), Expect = 2e-09
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 56 atgttaatgcatctaggcacacatatatgtctagattcattaacatatatatgaatgtgg 115
||||||||| |||||| || |||||| | |||| |||||||||||| ||||||||||||
Sbjct: 16 atgttaatgaatctagacatacatatctatctaaattcattaacatcaatatgaatgtgg 75
Query: 116 a 116
|
Sbjct: 76 a 76
Score = 48.1 bits (24), Expect = 2e-06
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 42 ccacattcatatatatgttaatgcatctaggcacacatatatgtctagattcattaacat 101
|||||||||||| ||||||||| || ||| | | || |||||||||||||||||||||
Sbjct: 75 ccacattcatattgatgttaatgaatttagatagatatgtatgtctagattcattaacat 16
>46336_miR809:micropc
Length = 98
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatatatatgaatgtg 114
||||||||||||||||||||| ||| |||||||||||
Sbjct: 48 atatatgtctagattcattaatataaatatgaatgtg 84
>45839_miR809:micropc
Length = 98
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatatatatgaatgtg 114
||||||||||||||||||||| ||| |||||||||||
Sbjct: 48 atatatgtctagattcattaatataaatatgaatgtg 84
>46437_miR1436:micropc
Length = 108
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatg 64
||||| ||||||||||||||||||| |||||| || ||||||
Sbjct: 88 taagattttctagcattgcccacatacatatagatattaatg 47
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcat 51
||||||||||||||||||| || ||||||
Sbjct: 21 taagactttctagcattgctcatattcat 49
