miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 214 bits (108), Expect = 3e-55
Identities = 138/148 (93%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 152 ctccgtttcaagttataagactttctagcattgcccacattcatatatatgttaatgaat 93
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtggacaatacgagaa 127
|| |||||| ||||||||||||||| |||||||||||||||||||||| |||| | ||||
Sbjct: 92 cttggcacatatatatgtctagatttattaacatatatatgaatgtgggcaatgccagaa 33
Query: 128 agtcttataacctgaaacggaggtagta 155
||||||||||| ||||||||||| ||||
Sbjct: 32 agtcttataacttgaaacggaggaagta 5
Score = 182 bits (92), Expect = 9e-46
Identities = 134/148 (90%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 11 ctccgtttcaagttataagactttctggcattgcccacattcatatatatgttaataaat 70
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtggacaatacgagaa 127
|||| || | |||| || | |||||||||||||||||||||||||||| |||| | ||||
Sbjct: 71 ctagacatatatatgtgccaagattcattaacatatatatgaatgtgggcaatgctagaa 130
Query: 128 agtcttataacctgaaacggaggtagta 155
||||||||||| ||||||||||||||||
Sbjct: 131 agtcttataacttgaaacggaggtagta 158
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 186 bits (94), Expect = 6e-47
Identities = 109/114 (95%)
Strand = Plus / Minus
Query: 22 ataagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatat 81
||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacacatac 55
Query: 82 atgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttat 135
||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 54 atgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttat 1
Score = 123 bits (62), Expect = 7e-28
Identities = 101/114 (88%)
Strand = Plus / Plus
Query: 22 ataagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatat 81
||||||||||||||||||| ||||||||||||||||||||||| |||||| || || |
Sbjct: 1 ataagactttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgt 60
Query: 82 atgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttat 135
|| |||||||||||||||| ||||||||||||| |||| | ||||||||||||
Sbjct: 61 gtgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 170 bits (86), Expect = 4e-42
Identities = 107/114 (93%)
Strand = Plus / Minus
Query: 22 ataagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatat 81
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcacatatat 55
Query: 82 atgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttat 135
|| ||||||||||||||||||||||||||||||| |||| | ||||||||||||
Sbjct: 54 atatctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttat 1
Score = 139 bits (70), Expect = 1e-32
Identities = 103/114 (90%)
Strand = Plus / Plus
Query: 22 ataagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatat 81
||||||||||||||||||||||||||||||||||||||||||| |||||| | | ||||
Sbjct: 1 ataagactttctagcattgcccacattcatatatatgttaatgaatctagatatatatat 60
Query: 82 atgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttat 135
|| |||||||||||||||| ||||||||||||| |||| | ||||||||||||
Sbjct: 61 gtgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 163 bits (82), Expect = 9e-40
Identities = 106/114 (92%)
Strand = Plus / Plus
Query: 22 ataagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatat 81
||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||
Sbjct: 1 ataagactttctagcattgcccatattcatatatatgttaatgaatctaggcatacatat 60
Query: 82 atgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttat 135
||| |||||||||||||||| ||||||||||||| |||| | ||||||||||||
Sbjct: 61 atgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttat 114
Score = 147 bits (74), Expect = 5e-35
Identities = 104/114 (91%)
Strand = Plus / Minus
Query: 22 ataagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatat 81
||||||||||||||||||||||||||||||||| ||||||||| ||||||||| | || |
Sbjct: 114 ataagactttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgt 55
Query: 82 atgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttat 135
||| |||||||||||||||||||||||||| ||| |||| | ||||||||||||
Sbjct: 54 atgcctagattcattaacatatatatgaatatgggcaatgctagaaagtcttat 1
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 159 bits (80), Expect = 1e-38
Identities = 131/148 (88%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| |
Sbjct: 11 ctccgtttcatattataagactttctagcattgcccacaatcatatagatgttaatgaac 70
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtggacaatacgagaa 127
||| |||| |||||||||||||||||||| ||| ||||||||||||| |||| | ||||
Sbjct: 71 ctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaatgctagaa 130
Query: 128 agtcttataacctgaaacggaggtagta 155
|||||||||| ||||||||||| ||||
Sbjct: 131 agtcttataatatgaaacggaggaagta 158
Score = 143 bits (72), Expect = 8e-34
Identities = 129/148 (87%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||| ||
Sbjct: 152 ctccgtttcatattataagactttctagcattgcccacattcatatagatgctaatgaat 93
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtggacaatacgagaa 127
|||| || | |||| ||| ||| ||||||||||| ||||||| ||||| |||| | ||||
Sbjct: 92 ctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatgctagaa 33
Query: 128 agtcttataacctgaaacggaggtagta 155
|||||||||| ||||||||||| ||||
Sbjct: 32 agtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 157 bits (79), Expect = 5e-38
Identities = 133/150 (88%), Gaps = 2/150 (1%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 154 ctccgtttcatattataagactttctagcattgcccacattcatatagatgttaatgaat 95
Query: 68 c--taggcacacatatatgtctagattcattaacatatatatgaatgtggacaatacgag 125
| || ||||||||||| | ||||||||||||||| ||||||||||||| |||| | ||
Sbjct: 94 ctatacacacacatatatatatagattcattaacatctatatgaatgtgggcaatgctag 35
Query: 126 aaagtcttataacctgaaacggaggtagta 155
|||||||||||| ||||||||||| ||||
Sbjct: 34 aaagtcttataatatgaaacggaggaagta 5
Score = 125 bits (63), Expect = 2e-28
Identities = 129/150 (86%), Gaps = 2/150 (1%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 11 ctccgtttcatattataagactttctagcattgcccacattcatatagatgttaatgaat 70
Query: 68 ctaggcacaca--tatatgtctagattcattaacatatatatgaatgtggacaatacgag 125
||| | | | | | ||| ||||||||||||||| ||||||||||||| |||| | ||
Sbjct: 71 ctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggcaatgctag 130
Query: 126 aaagtcttataacctgaaacggaggtagta 155
|||||||||||| ||||||||||| ||||
Sbjct: 131 aaagtcttataatatgaaacggagggagta 160
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 145 bits (73), Expect = 2e-34
Identities = 131/149 (87%), Gaps = 1/149 (0%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaa-tgca 66
|||||||||| |||||||||||||||||||| |||||||||||||| ||||||| | |
Sbjct: 11 ctccgtttcatattataagactttctagcattacccacattcatatagatgttaaattaa 70
Query: 67 tctaggcacacatatatgtctagattcattaacatatatatgaatgtggacaatacgaga 126
||||| ||| | |||| ||||||||||||||||| ||||||||||||| |||| | |||
Sbjct: 71 tctagacacctacatatatctagattcattaacatctatatgaatgtgggcaatgctaga 130
Query: 127 aagtcttataacctgaaacggaggtagta 155
||||||||||| |||||||||||| ||||
Sbjct: 131 aagtcttataatctgaaacggagggagta 159
Score = 129 bits (65), Expect = 1e-29
Identities = 129/149 (86%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 153 ctccgtttcagattataagactttctagcattgcccacattcatatagatgttaatgaat 94
Query: 68 ctaggcacacatatatgtctagattca-ttaacatatatatgaatgtggacaatacgaga 126
|||| | | || |||||||||| | ||||||| ||||||||||||| ||| | |||
Sbjct: 93 ctagatatatgtaggtgtctagattaatttaacatctatatgaatgtgggtaatgctaga 34
Query: 127 aagtcttataacctgaaacggaggtagta 155
||||||||||| ||||||||||| ||||
Sbjct: 33 aagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 118/133 (88%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||| ||||||||| |||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 137 taagactttttagcattgctcacattcatatagatgttaatgaatctagacacacatata 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
| ||||||||||||||||| ||||||||||||| |||| | ||||||||||| | |||
Sbjct: 77 tttctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 113 bits (57), Expect = 7e-25
Identities = 114/133 (85%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||||||||||||||||||||||| ||||||||| |||||| | | || |
Sbjct: 26 taagactttctagcattgcccacattcatatagatgttaatgaatctagaaatatatgtg 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||||||||||||||||||| |||||||||||| |||| | | ||||||||| | |||
Sbjct: 86 tgtctagattcattaacatctatatgaatgtgagcaatgctaaaaagtcttacattatga 145
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 146 aacggagggagta 158
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 118/133 (88%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||||||||| || ||||||||| ||||||||| |||||| |||| |||||
Sbjct: 137 taagactttctagcattgctcatattcatatagatgttaatgaatctagacacatatata 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||||||||||||||||||| ||||||||||||| |||||| |||||| |||| | |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatactagaaagacttacattatga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 113 bits (57), Expect = 7e-25
Identities = 114/133 (85%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||| |||||||| |||||||||||||||||| ||||||||| |||||| || | ||||
Sbjct: 26 taagtctttctagtattgcccacattcatatagatgttaatgaatctagacatatatatg 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||||||||||||||||||| ||||||||| || |||| | ||||||||||| | |||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgagcaatgctagaaagtcttacattatga 145
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 146 aacggagggagta 158
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 143 bits (72), Expect = 8e-34
Identities = 102/112 (91%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 137 taagactttctagcattgcccacattcatatatatgctaatgaatctaggcacacatata 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtctta 134
||||||||||||||| || ||||| ||||||| ||| | |||||||||||
Sbjct: 77 tgtctagattcattagtatctatataaatgtgggcaacgctagaaagtctta 26
Score = 97.6 bits (49), Expect = 4e-20
Identities = 112/133 (84%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||||| ||||||||||| ||||| || ||||| |||||| || | || |
Sbjct: 26 taagactttctagcgttgcccacatttatatagatactaatgaatctagacatatatgtg 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
|| |||||||||||| ||||||||||||||||| |||| | ||||||||||| | |||
Sbjct: 86 tgcctagattcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatga 145
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 146 aacggagggagta 158
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 143 bits (72), Expect = 8e-34
Identities = 102/112 (91%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||
Sbjct: 5 taagactttctagcattgcccacattcatatctatgctaatgaatctaggcacacatata 64
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtctta 134
|||||||||||||| ||| ||||||||||||| |||| |||||||||||
Sbjct: 65 tgtctagattcatttgcatctatatgaatgtgggcaatgttagaaagtctta 116
Score = 95.6 bits (48), Expect = 2e-19
Identities = 96/112 (85%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||| ||||||||||||||||||| ||| |||| |||||| || | || |
Sbjct: 116 taagactttctaacattgcccacattcatatagatgcaaatgaatctagacatatatgtg 57
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtctta 134
|| |||||||||||| |||| |||||||||||| |||| | |||||||||||
Sbjct: 56 tgcctagattcattagcatagatatgaatgtgggcaatgctagaaagtctta 5
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 143 bits (72), Expect = 8e-34
Identities = 129/148 (87%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||| |||||||||||||||||||||||| |||| ||
Sbjct: 11 ctccgtttcatattataagactttctaacattgcccacattcatatatatgtcaatgaat 70
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtggacaatacgagaa 127
|||| || | |||| ||| |||||||||| |||| |||||||| |||||||| | ||||
Sbjct: 71 ctagacatatatatgtgtttagattcattgacatctatatgaagatggacaattctagaa 130
Query: 128 agtcttataacctgaaacggaggtagta 155
|||||||||| ||||||||||| ||||
Sbjct: 131 agtcttataatatgaaacggagggagta 158
Score = 135 bits (68), Expect = 2e-31
Identities = 128/148 (86%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||||||||||||| |||| ||| |||||||| |||| |||| ||
Sbjct: 152 ctccgtttcatattataagactttctagaattgtccatcttcatatagatgtcaatgaat 93
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtggacaatacgagaa 127
||| |||| ||||||||||||||||||| |||||||||||||||||| |||| ||||
Sbjct: 92 ctaaacacatatatatgtctagattcattgacatatatatgaatgtgggcaatgttagaa 33
Query: 128 agtcttataacctgaaacggaggtagta 155
|||||||||| ||||||||||| ||||
Sbjct: 32 agtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 117/133 (87%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||| | |||||| ||||||||| ||||||||| || ||| ||| ||||||
Sbjct: 26 taagactttctagtactgcccatattcatatagatgttaatgaatttagacacgcatata 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||||||||||||||||||| ||||||||||||| |||||| ||||||||||| | |||
Sbjct: 86 tgtctagattcattaacatctatatgaatgtgggcaatactagaaagtcttacattgtga 145
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 146 aacggagggagta 158
Score = 105 bits (53), Expect = 2e-22
Identities = 113/133 (84%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||| |||||||||||||||||| ||||||||| |||||| || | ||
Sbjct: 137 taagactttctagtattgcccacattcatatagatgttaatgaatctagacatatatgcg 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
|||||| |||||||||||| ||||||||| ||| || ||| ||||||||||| | |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtcttacattgtga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 117/133 (87%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||| ||| ||||||||||||| ||||||||| ||||| ||||||||||
Sbjct: 137 taagactttctaggtttgtccacattcatatagatgttaatgaatctaaacacacatata 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||||||||||||||||||| ||||||||||| |||||| | ||||||||||| | |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtagacaatgctagaaagtcttacattatga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 113 bits (57), Expect = 7e-25
Identities = 114/133 (85%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||||||||| | ||||||||||| ||||||||| |||||| || | || |
Sbjct: 26 taagactttctagcattgtctacattcatatagatgttaatgaatctagacatatatgtg 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||| ||||||||||||||| ||||||||||||||||| | ||||||||||| | |||
Sbjct: 86 tgtttagattcattaacatctatatgaatgtggacaaacctagaaagtcttacattatga 145
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 146 aacggagggagta 158
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 117/133 (87%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||| ||||||| | |||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 26 taagactttttagcattcctcacattcatatagatgttaatgaatctagacacacatata 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
| ||||||||||||||||| ||||||||||||| |||| | ||||||||||| | |||
Sbjct: 86 tttctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 145
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 146 aacggaggaagta 158
Score = 111 bits (56), Expect = 3e-24
Identities = 83/92 (90%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||||||||||||||||||||||| ||||||||| |||||| | | || |
Sbjct: 137 taagactttctagcattgcccacattcatatagatgttaatgaatctagaaatatatgtg 78
Query: 83 tgtctagattcattaacatatatatgaatgtg 114
||||||||||||||||||| ||||||||||||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtg 46
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 101/112 (90%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 26 taagactttctagccttgcccacattcatatatatgttaatgaatctagacacacatata 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtctta 134
||| |||||||||| | || ||||||||||||| |||| | | |||||||||
Sbjct: 86 tgtttagattcattgatatctatatgaatgtgggcaatgctaaaaagtctta 137
Score = 103 bits (52), Expect = 7e-22
Identities = 97/112 (86%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||| |||||||||||||||||||||| || | |||| ||||| || | || |
Sbjct: 137 taagactttttagcattgcccacattcatatagatatcaatgaatctaaacatatatgtg 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtctta 134
||||||||||||||||||||||||||||||||| ||| | |||||||||||
Sbjct: 77 tgtctagattcattaacatatatatgaatgtgggcaaggctagaaagtctta 26
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 116/133 (87%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||| | |||||| ||||||||| ||||||||| || ||| ||| ||||||
Sbjct: 26 taagactttctagtactgcccatattcatatagatgttaatgaatttagacacgcatata 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||||||||||||||||||| ||||||||| ||| |||||| ||||||||||| | |||
Sbjct: 86 tgtctagattcattaacatctatatgaatatgggcaatactagaaagtcttacattgtga 145
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 146 aacggagggagta 158
Score = 97.6 bits (49), Expect = 4e-20
Identities = 112/133 (84%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||| |||||||| ||||||||| ||||||||| |||||| || | ||
Sbjct: 137 taagactttctagtattgcccatattcatatagatgttaatgaatctagacatatatgcg 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
|||||| |||||||||||| ||||||||| ||| || ||| ||||||||||| | |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatatgggcagtactagaaagtcttacatggtga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 89/98 (90%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||| |||||||||| |||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 26 taagacttcctagcattgctcacattcatatagatgttaatgaatctagacacacatata 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaat 120
| ||||||||||||||||| ||| ||||||||| ||||
Sbjct: 86 tatctagattcattaacatctatgtgaatgtgggcaat 123
Score = 89.7 bits (45), Expect = 1e-17
Identities = 111/133 (83%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||| || ||||||||||||||| ||| ||||||||| |||||| | | || |
Sbjct: 137 taagactttttaacattgcccacattcacatagatgttaatgaatctagatatatatgtg 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||||||||||||||||||| |||||||||||| |||| | || |||||||| | |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgagcaatgctaggaagtcttacattgtga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 126/148 (85%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||| |
Sbjct: 11 ctccgtttcataatataagactttctagtattgcccatattcatatagatgttaatgaac 70
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtggacaatacgagaa 127
|||| | | | |||||||||||||||||||||| |||||||||||||||||| | | ||
Sbjct: 71 ctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatcctaaaa 130
Query: 128 agtcttataacctgaaacggaggtagta 155
||||||| | ||||||||||| ||||
Sbjct: 131 agtcttacattgtgaaacggagggagta 158
Score = 113 bits (57), Expect = 7e-25
Identities = 114/133 (85%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||| ||| |||| ||||||||||||| ||||||||| |||||| || | ||||
Sbjct: 137 taagactttttaggattgtccacattcatatagatgttaatgaatctagacatatgtata 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
| ||||| ||||||||||| ||||||||| ||| |||||| ||||||||||||| |||
Sbjct: 77 tatctaggttcattaacatctatatgaatatgggcaatactagaaagtcttatattatga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 119 bits (60), Expect = 1e-26
Identities = 82/89 (92%), Gaps = 4/89 (4%)
Strand = Plus / Minus
Query: 32 ctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctagat 91
||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||
Sbjct: 90 ctagcattgcccacattcatatatatgttaatgaatctag----atatatatgtctagat 35
Query: 92 tcattaacatatatatgaatgtggacaat 120
|||||||||||||||||||||||| ||||
Sbjct: 34 tcattaacatatatatgaatgtgggcaat 6
Score = 111 bits (56), Expect = 3e-24
Identities = 78/85 (91%), Gaps = 4/85 (4%)
Strand = Plus / Plus
Query: 36 cattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctagattcat 95
||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||
Sbjct: 5 cattgcccacattcatatatatgttaatgaatctag----acatatatatctagattcat 60
Query: 96 taacatatatatgaatgtggacaat 120
|||||||||||||||||||| ||||
Sbjct: 61 taacatatatatgaatgtgggcaat 85
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 126/148 (85%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||| |
Sbjct: 152 ctccgtttcataatataagactttctagtattgcccatattcatatagatgttaatgaac 93
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtggacaatacgagaa 127
|||| | | | |||||||||||||||||||||| |||||||||||||||||| | | ||
Sbjct: 92 ctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatcctaaaa 33
Query: 128 agtcttataacctgaaacggaggtagta 155
||||||| | ||||||||||| ||||
Sbjct: 32 agtcttacattgtgaaacggagggagta 5
Score = 113 bits (57), Expect = 7e-25
Identities = 114/133 (85%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||| ||| |||| ||||||||||||| ||||||||| |||||| || | ||||
Sbjct: 26 taagactttttaggattgtccacattcatatagatgttaatgaatctagacatatgtata 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
| ||||| ||||||||||| ||||||||| ||| |||||| ||||||||||||| |||
Sbjct: 86 tatctaggttcattaacatctatatgaatatgggcaatactagaaagtcttatattatga 145
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 146 aacggagggagta 158
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 119 bits (60), Expect = 1e-26
Identities = 84/92 (91%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||||||| |||||||||||||| ||||||||| |||||| |||| |||||
Sbjct: 2 taagactttctagcatcacccacattcatatagatgttaatgaatctagacacatatata 61
Query: 83 tgtctagattcattaacatatatatgaatgtg 114
|||||||||||||| |||| ||||||||||||
Sbjct: 62 tgtctagattcatttacatctatatgaatgtg 93
Score = 97.6 bits (49), Expect = 4e-20
Identities = 82/93 (88%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||||||| | |||||||||||| |||| |||| |||||| || | ||||
Sbjct: 113 taagactttctagcatcacacacattcatatagatgtaaatgaatctagacatatatatg 54
Query: 83 tgtctagattcattaacatatatatgaatgtgg 115
||||||||||||||||||| |||||||||||||
Sbjct: 53 tgtctagattcattaacatctatatgaatgtgg 21
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 114/133 (85%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||||||||||||||| |||||| ||||||||| ||||| |||| | |||
Sbjct: 26 taagactttctagcattgcccacatacatataaatgttaatgaatctaaacacatacata 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||||||||||||||| ||| || |||||| ||| |||| | ||||||||||| | |||
Sbjct: 86 tgtctagattcattagcatctaaatgaatttgggcaatgctagaaagtcttacattgtga 145
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 146 aacggagggagta 158
Score = 97.6 bits (49), Expect = 4e-20
Identities = 112/133 (84%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||||||||||||| |||||| || ||| ||||| |||||| || | |||
Sbjct: 137 taagactttctagcattgcccaaattcatttagatgctaatgaatctagacatatgtatg 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||| ||||||||||||||| |||||| |||||| |||| | ||||||||||| | |||
Sbjct: 77 tgtttagattcattaacatttatatgtatgtgggcaatgctagaaagtcttacattgtga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 111 bits (56), Expect = 3e-24
Identities = 92/103 (89%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 20 ttataagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacat 79
|||||||||||||||| |||||||||||||||||| ||||||||| ||||| |||||||
Sbjct: 23 ttataagactttctagaattgcccacattcatatagatgttaatgaatctatacacacat 82
Query: 80 a--tatgtctagattcattaacatatatatgaatgtggacaat 120
| | ||| ||||||||||||||| ||||||||||||| ||||
Sbjct: 83 atgtgtgtatagattcattaacatctatatgaatgtgggcaat 125
Score = 107 bits (54), Expect = 4e-23
Identities = 105/121 (86%), Gaps = 2/121 (1%)
Strand = Plus / Minus
Query: 37 attgcccacattcatatatatgttaatgcatctaggcacacatatatgtcta--gattca 94
|||||||||||||||||| ||||||||| ||||| ||||||||| ||| || ||||||
Sbjct: 125 attgcccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattca 66
Query: 95 ttaacatatatatgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagt 154
||||||| ||||||||||||| |||| | |||||||||||||| |||||| |||| |||
Sbjct: 65 ttaacatctatatgaatgtgggcaattctagaaagtcttataatatgaaacagagggagt 6
Query: 155 a 155
|
Sbjct: 5 a 5
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 107 bits (54), Expect = 4e-23
Identities = 81/89 (91%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||| ||||||||||||||||||||||||||| ||||||||| |||||| ||||| |||
Sbjct: 26 taagtctttctagcattgcccacattcatatagatgttaatgaatctag--acacacata 83
Query: 83 tgtctagattcattaacatatatatgaat 111
||||||||||||||||||| || ||||||
Sbjct: 84 tgtctagattcattaacatctagatgaat 112
Score = 83.8 bits (42), Expect = 6e-16
Identities = 111/133 (83%), Gaps = 2/133 (1%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||| ||||||||| | |||||| || ||||||||| |||||| ||| || |
Sbjct: 135 taagactttgtagcattgcttatattcatctagatgttaatgaatctag--acatatgtg 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||||||||||||||||||| ||||||||||||| |||| | |||||| |||| | |||
Sbjct: 77 tgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa
Japonica Group
Length = 138
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | ||
Sbjct: 11 ctccgtttcatattataagactttctagcattgcccacattcatatagatgttaacgaat 70
Query: 68 ctaggcacacatatatg 84
||||||| |||||||||
Sbjct: 71 ctaggcatacatatatg 87
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatat 55
|||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 128 ctccatttcagattataagactttctagcattgcccacattcatatat 81
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 81 tatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacct 140
|||| |||||||| ||||||| ||||||||||||| |||| | |||||||||||||| |
Sbjct: 79 tatgcctagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatat 20
Query: 141 gaaacggaggtagta 155
|||||||||| ||||
Sbjct: 19 gaaacggaggaagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 102 atatatgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
|||||||||||||| |||| | |||||||||||||| |||||| ||||||||||
Sbjct: 81 atatatgaatgtgggcaatgctagaaagtcttataatctgaaatggaggtagta 134
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 113/133 (84%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||||||||||| |||||||||| ||||||||| ||||| || ||||
Sbjct: 137 taagactttctagcattgcccgcattcatatagatgttaatgaatctatatacttatatg 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||||||||||||||| ||| ||| ||||||||| |||| | ||||||||||| | |||
Sbjct: 77 tgtctagattcattagcatctatgtgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 113/133 (84%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||||||||||||||||||| ||| ||| ||||| |||||| |||| |||
Sbjct: 26 taagactttctagcattgcccacattcacatagatgctaatgaatctagacacatataag 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
| | ||||||||||||||| |||||||||| || |||| | ||||||||||| | |||
Sbjct: 86 tatatagattcattaacatctatatgaatgcgggcaatgctagaaagtcttacattgtga 145
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 146 aacggagggagta 158
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 78/87 (89%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
||||||||||| ||||||||||||| ||| ||||| ||||||||| | ||||| ||||||
Sbjct: 33 ttctagcattgtccacattcatatagatgctaatgaatctaggcatatatataagtctag 92
Query: 90 attcattaacatatatatgaatgtgga 116
|||||||||||| |||||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgga 119
Score = 85.7 bits (43), Expect = 2e-16
Identities = 79/91 (86%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| |||||||||||| ||||||||| |||||| | | ||||||| ||||
Sbjct: 130 ttctagcattttccacattcatattgatgttaatgaatctagacttatatatatgcctag 71
Query: 90 attcattaacatatatatgaatgtggacaat 120
|||||||| ||| ||||||||||||||||||
Sbjct: 70 attcattagcatctatatgaatgtggacaat 40
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 99.6 bits (50), Expect = 1e-20
Identities = 113/133 (84%), Gaps = 2/133 (1%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||||||||| ||||||||||||| ||||||||| |||||| ||| ||||||
Sbjct: 135 taagactttctagcattgtccacattcatataaatgttaatgaatctagacacgcatata 76
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
|||||||||||||||| |||||||| | | |||| | ||||||||||| | |||
Sbjct: 75 --cctagattcattaacatcaatatgaatataggcaatgctagaaagtcttacattatga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 113/133 (84%), Gaps = 2/133 (1%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||||||||||| | |||||||| ||||||||| ||||||| | | |
Sbjct: 26 taagactttctagcattgcctatattcatattgatgttaatgaatctaggtata--tgcg 83
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||||||||||||||||||| |||||||||||||||||| | ||||||||||| | |||
Sbjct: 84 tgtctagattcattaacatttatatgaatgtggacaatgctagaaagtcttacattatga 143
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 144 aacggaggaagta 156
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataa 137
|||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||
Sbjct: 55 atatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttataa 114
Query: 138 cctgaaacggaggtagta 155
||||||||||| ||||
Sbjct: 115 tttgaaacggagggagta 132
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 126 ctccgtttcaaattataagactttctagcattacccacattcatatatatgttaatgaat 67
Query: 68 ctag 71
||||
Sbjct: 66 ctag 63
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgt 59
|||||||||| |||||||||||||||| ||| |||||||||||||||||||
Sbjct: 11 ctccgtttcatattataagactttctagtattacccacattcatatatatgt 62
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 98 acatatatatgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
|||||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||
Sbjct: 62 acatatatatgaatgtgggtaatactagaaagtcttataatatgaaacggaggaagta 5
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 24 aagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatat 83
|||||||||||||||| ||||||||||| || ||||||||| ||||| |||| ||||||
Sbjct: 27 aagactttctagcattacccacattcatttagatgttaatgaatctaaacacatatatat 86
Query: 84 gtctagattcattaacat 101
||||||||||||||||||
Sbjct: 87 gtctagattcattaacat 104
Score = 61.9 bits (31), Expect = 2e-09
Identities = 91/111 (81%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||| ||||||| | | | ||| ||||||||| |||||| || | ||||
Sbjct: 137 taagactttctaacattgcctatgtacccatagatgttaatgaatctagacatatatatg 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtctt 133
||| ||||||||||||||| || |||||||||| ||| | ||||||||||
Sbjct: 77 tgtttagattcattaacatctaaatgaatgtgggtaatgctagaaagtctt 27
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
|||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||
Sbjct: 63 tgtctagattcattaacatatatatgaatgtggacaatgctagaaagtcttataatatga 122
Query: 143 aacggaggtagta 155
||| |||| ||||
Sbjct: 123 aacagaggaagta 135
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 20 ttataagactttctagcattgcccacattcatatatatgttaatgcatctag 71
||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 117 ttataagactttctagcattgtccacattcatatatatgttaatgaatctag 66
Score = 73.8 bits (37), Expect = 6e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 20 ttataagactttctagcattgcccacattcatatatatgtt 60
|||||||||||||||||||| ||||||||||||||||||||
Sbjct: 23 ttataagactttctagcattacccacattcatatatatgtt 63
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 97 aacatatatatgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
||||||||||||||||||| ||| | |||||||||||||| |||||||||| ||||
Sbjct: 63 aacatatatatgaatgtgggtaatgctagaaagtcttataataagaaacggaggaagta 5
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 11 ctccgtttcatattataagactttctagcattgcccacattcatatatacgttaatgaat 70
Query: 68 ctag 71
||||
Sbjct: 71 ctag 74
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 82 atgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctg 141
|||||||||||||||||| ||||||||||||||| |||| | |||||||||||||| ||
Sbjct: 78 atgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatg 19
Query: 142 aaacggaggtagta 155
||||||||| ||||
Sbjct: 18 aaacggagggagta 5
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 122 ctccgtttcatattataagactttctagcattgcccacattcatatatacgttaatgaat 63
Query: 68 ctag 71
||||
Sbjct: 62 ctag 59
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 82 atgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctg 141
|||||||||||||||||| ||||||||||||||| |||| | |||||||||||||| ||
Sbjct: 55 atgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatg 114
Query: 142 aaacggaggtagta 155
||||||||| ||||
Sbjct: 115 aaacggagggagta 128
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 120 ctccgtttcatattataagactttctagcattgcccacattcatatagatgttaatgaat 61
Query: 68 ctag 71
||||
Sbjct: 60 ctag 57
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 82 atgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctg 141
|||||||||||||||||||| ||||||||||||| |||| | |||||||||||||| ||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatg 112
Query: 142 aaacggaggtagta 155
||||||||| ||||
Sbjct: 113 aaacggaggaagta 126
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcat 51
|||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 11 ctccgtttcatattataagattttctagcattgcccacattcat 54
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 106 atgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
|||||||||| |||| | ||||| |||||||| ||||||||||| ||||
Sbjct: 54 atgaatgtgggcaatgctagaaaatcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 7e-19
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| |||| ||||||||| ||||||||| |||||| ||||||| ||| ||||
Sbjct: 130 ttctagcattacccatattcatatagatgttaatgaatctagacacacatctatatctaa 71
Query: 90 attcattaacatatatatgaatgtggacaat 120
|||||||||||| |||||| |||||| ||||
Sbjct: 70 attcattaacatctatatgtatgtgggcaat 40
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||||||||||| |||||| ||||||||| || ||| | | || | |||||||
Sbjct: 33 ttctagcattgcccacatacatatagatgttaatgaatttagatatagatgtgtgtctag 92
Query: 90 attcattaacatatatatgaat 111
|||||||||||| |||||||||
Sbjct: 93 attcattaacatctatatgaat 114
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||||||| ||||||||||| || |||||||| |||||| || ||||
Sbjct: 26 taagactttctagcattacccacattcatttagttgttaatgaatctagacatgtgtata 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
| | ||||||||||||||| |||||| || |||||||| | ||||||||||| | |||
Sbjct: 86 tatttagattcattaacatctatatgtatatggacaatgctagaaagtcttacattgtga 145
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 146 aacggagggagta 158
Score = 73.8 bits (37), Expect = 6e-13
Identities = 109/133 (81%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||||||||| ||| || |||||| ||||||||| ||||| | | | | |
Sbjct: 137 taagactttctagcattgtccatatacatatagatgttaatgaatctaaatatatacaca 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
|||||||||||||||||| || |||||||||| ||| | ||||||||||| | |||
Sbjct: 77 tgtctagattcattaacaactaaatgaatgtgggtaatgctagaaagtcttacattgtga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||||||||| || || |||||| | ||||||| ||||| |||| | |||
Sbjct: 26 taagactttctagcattgctcatatacatatagacgttaatgaatctaaacacatacata 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||||||||||||||||||| || |||||| ||| |||| | | ||||||||| | |||
Sbjct: 86 tgtctagattcattaacatctaaatgaatatgggcaatgctaaaaagtcttacattgtga 145
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 146 aacggaggaagta 158
Score = 73.8 bits (37), Expect = 6e-13
Identities = 109/133 (81%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||| |||||||||||| |||||| || ||||||||| |||||| || | |||
Sbjct: 137 taagactttttagcattgcccatattcatttagatgttaatgaatctagacatatgtatg 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||| ||||||||||||| | |||||| || || |||| | ||||||||||| | |||
Sbjct: 77 tgtttagattcattaacgtctatatgtatatgagcaatgctagaaagtcttacattgtga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 111/133 (83%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||| ||||||||| | ||||| ||||||||| ||||| ||| | |||
Sbjct: 137 taagactttctagtattgcccacgtacatatggatgttaatgaatctaaatacatacata 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||||||||||||||||||| || |||||| ||| |||| | ||||||||||| | |||
Sbjct: 77 tgtctagattcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 111/133 (83%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||||||||||||| |||||| || ||||||||| |||||| || | |||
Sbjct: 26 taagactttctagcattgcccatattcatttagatgttaatgaatctagacatatgtatg 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
| | ||||||||||||||| ||||| | |||| |||||| ||||||||||| | |||
Sbjct: 86 tatttagattcattaacatccatatgtacgtgggcaatactagaaagtcttacattgtga 145
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 146 aacggagggagta 158
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 20 ttataagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacat 79
||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||
Sbjct: 114 ttataagactttctagcattgcccacattcatatagatgttaatgaatctaaacacacat 55
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 87 tagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctgaaacg 146
||||||||||||||| ||||||||||||| |||| | |||||||||||||| ||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaact 123
Query: 147 gaggtagta 155
|||| ||||
Sbjct: 124 gaggaagta 132
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattca 50
|||||||||| |||||||||||||||||||||||||||||||
Sbjct: 11 ctccgtttcatattataagactttctagcattgcccacattca 53
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 107 tgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
||||||||| |||| | |||||||||||||| ||||||||||| ||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 95/112 (84%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||||||||| ||||| |||||| ||||||||| ||||| ||| | |||
Sbjct: 137 taagactttctagcattgctcacatacatatagatgttaatgaatctaaacacgtacata 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtctta 134
|||||| |||||||||||| || |||||||| | ||||| | |||||||||
Sbjct: 77 tgtctatattcattaacatctaaatgaatgtaggcaatattaaaaagtctta 26
Score = 58.0 bits (29), Expect = 4e-08
Identities = 107/133 (80%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||| || |||||| |||||||| || ||||||||| || ||| || | ||
Sbjct: 26 taagactttttaatattgcctacattcatttagatgttaatgaatatagacatatgtacg 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||| ||||||||||||||| |||||| ||||| |||| | ||||||||||| | |||
Sbjct: 86 tgtttagattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtga 145
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 146 aacggaggaagta 158
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 92/108 (85%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||| | || ||||||| ||||||||||||| ||||||||| ||
Sbjct: 152 ctccgtttcacaatataagtcattttagcatttcccacattcatattaatgttaatgaat 93
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtgg 115
|||| | | |||||||||||||||||||||||| ||||||||||||
Sbjct: 92 ctagatagatatatatgtctagattcattaacatcaatatgaatgtgg 45
Score = 77.8 bits (39), Expect = 4e-14
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 33 tagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctagatt 92
||||||| ||||||||||||| ||||||||| |||||| || | |||| | ||||||||
Sbjct: 36 tagcattacccacattcatattgatgttaatgaatctagacatatatatctatctagatt 95
Query: 93 cattaacatatatatgaatgtgg 115
||||||||| ||||||||||||
Sbjct: 96 cattaacattaatatgaatgtgg 118
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 87.7 bits (44), Expect = 4e-17
Identities = 119/143 (83%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||| | |||||| ||||||||||||| |||| || ||||| ||
Sbjct: 150 ctccgtttcacaatataagtcattctaggattgcccacattcttatagatactaatgaat 91
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtggacaatacgagaa 127
|||| |||| |||||||| |||||||||||||| ||||||||||||| |||| | ||||
Sbjct: 90 ctagccaca--tatatgtccagattcattaacatctatatgaatgtgggcaatgctagaa 33
Query: 128 agtcttataacctgaaacggagg 150
| |||||| |||||||||||
Sbjct: 32 tgacttatattatgaaacggagg 10
Score = 81.8 bits (41), Expect = 3e-15
Identities = 122/148 (82%), Gaps = 2/148 (1%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||| | ||||||||||||||||||||||||| ||||||||| ||
Sbjct: 11 ctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaat 70
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtggacaatacgagaa 127
|| | ||| |||| || |||||||||||| || |||| |||||||| |||| | ||||
Sbjct: 71 ct--ggacatatatgtggctagattcattagtatctataagaatgtgggcaatcctagaa 128
Query: 128 agtcttataacctgaaacggaggtagta 155
| |||||| ||||||||||| ||||
Sbjct: 129 tgacttatattgtgaaacggagggagta 156
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 85.7 bits (43), Expect = 2e-16
Identities = 97/114 (85%), Gaps = 2/114 (1%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatat--gttaatgcatctaggcacacata 80
||||||||| ||||||||| ||||| ||||||||| ||||||| ||||| |||| | |
Sbjct: 139 taagactttttagcattgctcacatacatatatatatgttaatgaatctaaacacataca 80
Query: 81 tatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtctta 134
||||| ||||||||||||||| || |||||||||| ||| | |||||||||||
Sbjct: 79 tatgtttagattcattaacatctaaatgaatgtgggtaatgctagaaagtctta 26
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||||||| ||||||||||| || ||||||||| ||||| || | |||
Sbjct: 26 taagactttctagcattacccacattcatttagatgttaatgaatctaaacatatgtatg 85
Query: 83 tgtctagattcattaacatatatat 107
||| |||||||||||||||||||||
Sbjct: 86 tgtttagattcattaacatatatat 110
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| || ||||||||||| ||||||||| |||||| ||||||| ||| ||||
Sbjct: 33 ttctagcattaccaacattcatatagatgttaatgaatctagacacacatctatatctaa 92
Query: 90 attcattaacatatatatgaatgtggacaat 120
|||||||||||| ||||| |||||| ||||
Sbjct: 93 attcattaacatctatatatatgtgggcaat 123
Score = 71.9 bits (36), Expect = 2e-12
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||||||||||| ||||| ||||||||| || ||| | | || | |||||||
Sbjct: 130 ttctagcattgcccacatatatatagatgttaatgaatttagatatagatgtgtgtctag 71
Query: 90 attcattaacatatatatgaatgt 113
|||||||||||| |||||||||||
Sbjct: 70 attcattaacatctatatgaatgt 47
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 20 ttataagactttctagcattgcccacattcatatatatgttaatgcatcta 70
||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 114 ttataagactttctagcattgcccacattcatatagatgttaatgaatcta 64
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 87 tagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctgaaacg 146
||||||||||||||| ||||||||||||| |||| | |||||||||||||| ||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaact 123
Query: 147 gaggtagta 155
|||| ||||
Sbjct: 124 gaggaagta 132
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattca 50
|||||||||| |||||||||||||||||||||||||||||||
Sbjct: 11 ctccgtttcatattataagactttctagcattgcccacattca 53
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 107 tgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
||||||||| |||| | |||||||||||||| ||||||||||| ||||
Sbjct: 53 tgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AP005603.3/127883-127741 39947:Oryza sativa
Japonica Group
Length = 143
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 89 gattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctgaaacgga 148
||||||||||||| |||||||||||||||| | | ||||||||||||| |||||||||||
Sbjct: 73 gattcattaacatctatatgaatgtggacagtgctagaaagtcttatagcctgaaacgga 132
Query: 149 ggtagta 155
|| ||||
Sbjct: 133 ggaagta 139
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatg 64
|||||||||||| ||||||||||||||||| || ||||||||||||| |||||||||
Sbjct: 133 ctccgtttcaggctataagactttctagcactgtccacattcatatagatgttaatg 77
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatata 54
|||||||||||||||||||||||||||||| || ||| |||||||||
Sbjct: 11 ctccgtttcaggttataagactttctagcactgtccatattcatata 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 103 tatatgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
||||||||| |||||| | | ||||||||||||||||||||||||||| ||||
Sbjct: 57 tatatgaatatggacagtgctagaaagtcttataacctgaaacggagggagta 5
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 112/135 (82%)
Strand = Plus / Minus
Query: 21 tataagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacata 80
||||||||||||||||||||||||| |||| ||| |||| |||| |||||| |||| ||
Sbjct: 139 tataagactttctagcattgcccacgttcacatagatgtcaatgaatctagacacatgta 80
Query: 81 tatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacct 140
||| ||||| ||||||||| ||||||||||| ||| | | ||||||||||| | |
Sbjct: 79 agtgtatagatccattaacatctatatgaatgtaaacagtgctagaaagtcttacattat 20
Query: 141 gaaacggaggtagta 155
|||||||||| ||||
Sbjct: 19 gaaacggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 95/114 (83%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||||| || ||||||||||| ||||||||| ||||| ||| | ||
Sbjct: 26 taagactttctagcactgtttacattcatatagatgttaatggatctatacacttacatg 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttata 136
|||||||||||||| |||| ||| |||| |||| |||| | |||||||||||||
Sbjct: 86 tgtctagattcattgacatctatgtgaacgtgggcaatgctagaaagtcttata 139
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 83.8 bits (42), Expect = 6e-16
Identities = 76/86 (88%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| ||||||||| ||||| ||||| | |||||| |||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatcta-gcacatacatatgtttag 91
Query: 90 attcattaacatatatatgaatgtgg 115
|||||||||||| ||||||||||||
Sbjct: 92 attcattaacatcaatatgaatgtgg 117
Score = 63.9 bits (32), Expect = 6e-10
Identities = 75/87 (86%), Gaps = 3/87 (3%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgt-cta 88
|||||||||| ||||||||||||| ||||||||| ||||| ||| || ||||| |||
Sbjct: 129 ttctagcatttcccacattcatattgatgttaatgaatcta--aacatatgtatgtgcta 72
Query: 89 gattcattaacatatatatgaatgtgg 115
||||||||||||| ||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgg 45
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 83.8 bits (42), Expect = 6e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataa 137
|||||||||||||||||||| ||| ||||||||||||| |||| ||||||||||||||
Sbjct: 61 atatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttataa 120
Query: 138 cctgaaacggaggtagta 155
||||||||||| ||||
Sbjct: 121 tatgaaacggagggagta 138
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||| ||
Sbjct: 132 ctccgtttcatattataagactttctatcattgcccacattcatatagatgctaatgaat 73
Query: 68 ctag 71
||||
Sbjct: 72 ctag 69
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 20 ttataagactttctagcattgcccacattcatatatat 57
|||||||||| ||||| |||||||||||||||||||||
Sbjct: 23 ttataagactatctagtattgcccacattcatatatat 60
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 100 atatatatgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
|||||||||||||||| |||||| ||| |||||||||| | ||||||||| ||||
Sbjct: 60 atatatatgaatgtgggcaatactagatagtcttataatataaaacggaggaagta 5
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 83.8 bits (42), Expect = 6e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| | ||||||||||| ||||||||| |||||| | | ||||||||||||
Sbjct: 7 ttctagcatttctcacattcatattgatgttaatgaatctagatagatatatatgtctag 66
Query: 90 attcattaacatatatatgaatgtgg 115
|||||||||||| ||||||||||||
Sbjct: 67 attcattaacatcaatatgaatgtgg 92
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| ||||||||| |||||| || | |||| | |||||
Sbjct: 104 ttctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatctag 45
Query: 90 attcattaacatatatatgaatgtg 114
|||||||||||| |||||||||||
Sbjct: 44 attcattaacatcaatatgaatgtg 20
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| ||||||||| |||||| | | |||||||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctagatagatatatatgtctac 92
Query: 90 attcattaacatatatatgaatgtgg 115
|||||||||||| ||||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgg 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 41 cccacattcatatatatgttaatgcatctaggcacacatatatgtctagattcattaaca 100
||||||||||||| ||||||||| || ||| || | |||| | ||||||||||||||||
Sbjct: 119 cccacattcatattgatgttaatgaatgtagacatatatatctatctagattcattaaca 60
Query: 101 tatatatgaatgtgg 115
| ||||||||||||
Sbjct: 59 tcaatatgaatgtgg 45
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 78/90 (86%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||||||||||||||| ||| || |||||||| |||||| || | | |||
Sbjct: 137 taagactttctagcattgcccacatacatttagatgttaataaatctagacatatacata 78
Query: 83 tgtctagattcattaacatatatatgaatg 112
||| ||||||||||||||| || |||||||
Sbjct: 77 tgtttagattcattaacatctaaatgaatg 48
Score = 65.9 bits (33), Expect = 2e-10
Identities = 108/133 (81%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||| ||| ||| || ||||||| || ||||||||| ||||| || | ||||
Sbjct: 26 taagactttatagtattacctccattcatttagatgttaatgaatctaaacatatgtata 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
|||||||||| |||||||| || ||| |||||| |||| | ||||||||||| | |||
Sbjct: 86 tgtctagatttattaacatctaaatgtatgtgggcaatgctagaaagtcttacattgtga 145
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 146 aacggagggagta 158
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 83.8 bits (42), Expect = 6e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| ||||||||| ||||| | | ||||||||||||
Sbjct: 104 ttctagcatttcccacattcatattgatgttaatgaatctaaatagatatatatgtctag 45
Query: 90 attcattaacatatatatgaatgtgg 115
|||||||||||| ||||||||||||
Sbjct: 44 attcattaacatcaatatgaatgtgg 19
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| ||||||||| |||||| || | |||| | | |||
Sbjct: 7 ttctagcatttcccacattcatattgatgttaatgaatctagacatatatatctatttag 66
Query: 90 attcattaacatatatatgaatgtgg 115
|||||||||||| ||||||||||||
Sbjct: 67 attcattaacatcaatatgaatgtgg 92
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 82 atgtctagattcattaacatatatatgaatgtggacaatacgagaaagtctta 134
|||||||||||||||||||| |||||||||||||||||| | |||||||||||
Sbjct: 59 atgtctagattcattaacatctatatgaatgtggacaatgctagaaagtctta 111
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||||||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 111 taagactttctagcattgtccacattcatatagatgttaatgaatctag 63
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgt 59
|||||||||||||||||| ||||||||||||| ||||
Sbjct: 26 taagactttctagcattgtccacattcatatagatgt 62
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 98 acatatatatgaatgtggacaatacgagaaagtctta 134
|||| |||||||||||||||||| | |||||||||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtctta 26
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
|||||||||| |||||||| ||| |||||||||||||| | |||||||||||||| |||
Sbjct: 77 tgtctagatttattaacatctatgtgaatgtggacaatgctagaaagtcttataatatga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||||||||| ||||||||| ||| |||||||| ||
Sbjct: 11 ctccgtttcatattataagactttctagcattgtccacattcacatagatgttaataaat 70
Query: 68 ctaggcaca 76
|||| ||||
Sbjct: 71 ctagacaca 79
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgtt 60
|||||||||| ||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 131 ctccgtttcatattataagactttctagcattgtccacattcatatagatgtt 79
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 97 aacatatatatgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
||||| |||||||||||||||||| | |||||||||||||| ||||||||||| ||||
Sbjct: 79 aacatctatatgaatgtggacaatgctagaaagtcttataatatgaaacggaggaagta 137
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| |||||||||||||| ||||| ||| ||||| | | ||| ||||||||
Sbjct: 130 ttctagcatttcccacattcatatagatgttgatgaatctaaatatatatagatgtctag 71
Query: 90 attcattaacatatatatgaatgtg 114
|||||||||||| ||||||||||||
Sbjct: 70 attcattaacatctatatgaatgtg 46
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 43 cacattcatatatatgttaatgcatctaggcacacatatatgtctagattcattaacata 102
|||||||||||| ||||||||| |||||| || |||||| | ||||||||| |||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacatctatatatatttagattcatcaacatc 105
Query: 103 tatatgaatgtgg 115
|||||||||||||
Sbjct: 106 tatatgaatgtgg 118
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/84 (88%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| ||||||||| |||||| ||| |||||||||||
Sbjct: 128 ttctagcatttcccacattcatattgatgttaatgaatctag--acatatatatgtctac 71
Query: 90 attcattaacatatatatgaatgt 113
|||||||||||| ||||||||||
Sbjct: 70 attcattaacatcaatatgaatgt 47
Score = 69.9 bits (35), Expect = 1e-11
Identities = 74/86 (86%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| | |||||||||| ||||||||| || ||| ||| ||||||||||||
Sbjct: 33 ttctagcattttctacattcatattgatgttaatgaatgtag--acatatatatgtctag 90
Query: 90 attcattaacatatatatgaatgtgg 115
|||||||||||| ||||||||||||
Sbjct: 91 attcattaacatcaatatgaatgtgg 116
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
||||||||||||| | ||||||||| ||||||||| |||||| || | | |||| |||||
Sbjct: 33 ttctagcattgcctatattcatatagatgttaatgaatctagacatagacatatatctag 92
Query: 90 attcattaacatatatatgaatgtg 114
|||||||||||| |||||||||||
Sbjct: 93 attcattaacatccatatgaatgtg 117
Score = 67.9 bits (34), Expect = 4e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||| ||| ||||||||||| ||||||||| |||||| | | | |||||||||
Sbjct: 130 ttctagcaatgctcacattcatatggatgttaatgaatctagatatatgtctatgtctag 71
Query: 90 attcattaacatatatatgaat 111
|||||||||||| |||||||||
Sbjct: 70 attcattaacatctatatgaat 49
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacaca 78
|||||||||||||||||||||||||||||||| ||||||||| || ||| ||||||
Sbjct: 26 taagactttctagcattgcccacattcatatagatgttaatgaatttagacacaca 81
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
|||||| |||||||||||| ||||||||||||| |||| | ||||||||||| | |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgt 59
|||||||||||||||||||||||||||||||| ||||
Sbjct: 121 taagactttctagcattgcccacattcatatagatgt 85
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 98 acatatatatgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
|||| ||||||||||||| |||| | ||||||||||| | ||||||||||| ||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 121/148 (81%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||| | || ||||||| ||||||||||||| |||||||||| ||
Sbjct: 11 ctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgttaatgaat 70
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtggacaatacgagaa 127
|||| | | |||||||||||||||||||| ||| |||| |||||| | ||| | ||||
Sbjct: 71 ctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatgctagaa 130
Query: 128 agtcttataacctgaaacggaggtagta 155
| |||||| ||||||||||| ||||
Sbjct: 131 tggcttatattgtgaaacggagggagta 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 89/108 (82%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||| | |||||||||| |||||| |||| ||| ||||| ||
Sbjct: 152 ctccgtttcacaatataagccattctagcatttttcacatttatattgatgataatgaat 93
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtgg 115
|||| || | |||| | |||||||||||||||||| ||||||||||||
Sbjct: 92 ctagacatatatatctatctagattcattaacataaatatgaatgtgg 45
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatcta 70
|||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 119 taagactttctagcattgcccacattcatatagatgttaatgaatcta 72
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatg 64
|||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 26 taagactttctagcattgcctacattcatatagatgttaatg 67
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 87 tagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctgaaacg 146
||||||||||||||| ||||||||||||| |||| | ||||||||||| | |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 147 gaggtagta 155
|||| ||||
Sbjct: 132 gagggagta 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 93 cattaacatatatatgaatgtggacaatacgagaaagtctta 134
||||||||| ||||||||||| | |||| | |||||||||||
Sbjct: 67 cattaacatctatatgaatgtaggcaatgctagaaagtctta 26
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 33 tagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctagatt 92
||||||| ||||||||||||| |||||||| |||||| | | |||||||||||||||
Sbjct: 36 tagcatttcccacattcatattagtgttaatgaatctagatagatatatatgtctagatt 95
Query: 93 cattaacatatatatgaatgtgga 116
||||||||| |||||||||||||
Sbjct: 96 cattaacattaatatgaatgtgga 119
Score = 67.9 bits (34), Expect = 4e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| |||||||||||| ||||||||| |||||| || | |||| | |||||
Sbjct: 130 ttctagcattctccacattcatattaatgttaatgaatctagacatatatatctatctag 71
Query: 90 attcattaacatatatatgaatgtgg 115
||||||||||| ||||||||||||
Sbjct: 70 attcattaacactaatatgaatgtgg 45
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 77.8 bits (39), Expect = 4e-14
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 73 cacacatatatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtct 132
|||| |||||||||||||||||||||||| || ||||||||||| ||| | |||||||||
Sbjct: 87 cacatatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtct 28
Query: 133 tataacctgaaacggaggtagta 155
|| | ||||||||||| ||||
Sbjct: 27 tacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctag 71
||||||||||||||||| |||||||||| || ||||||||| ||||||
Sbjct: 26 taagactttctagcattatccacattcatttagatgttaatgaatctag 74
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
||||| |||| |||||||||||||| |||||||| |||||| | | ||| ||||||||
Sbjct: 33 ttctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtctag 92
Query: 90 attcattaacatatatatgaatgtgga 116
||||||||||| ||||||||||||||
Sbjct: 93 attcattaacacctatatgaatgtgga 119
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| |||||||| |||||| || |||||| |||||
Sbjct: 130 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 71
Query: 90 attcattaacatatatatgaatgtgg 115
||||||||||| |||||||||||||
Sbjct: 70 attcattaacacctatatgaatgtgg 45
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 4e-14
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| ||||||||| |||||| | | |||||||| |||
Sbjct: 130 ttctagcatttcccacattcatattgatgttaatgaatctagataaatatatatgtatag 71
Query: 90 attcattaacatatatatgaatgtgga 116
|||||||||||| |||||||| ||||
Sbjct: 70 attcattaacatcaatatgaatatgga 44
Score = 60.0 bits (30), Expect = 9e-09
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||| |||||||| ||||||||| ||||| || | |||| | |||||
Sbjct: 33 ttctagcattttccatattcatattgatgttaatgaatctatacatatatatttatctag 92
Query: 90 attcattaacatatatatgaatgtgg 115
|||||||||||| ||||||||||||
Sbjct: 93 attcattaacatcaatatgaatgtgg 118
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 77.8 bits (39), Expect = 4e-14
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
||||| |||| |||||||||||||| |||||||| |||||| | | ||| ||||||||
Sbjct: 100 ttctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtctag 41
Query: 90 attcattaacatatatatgaatgtgga 116
||||||||||| ||||||||||||||
Sbjct: 40 attcattaacacctatatgaatgtgga 14
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| |||||||| |||||| || |||||| |||||
Sbjct: 3 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 62
Query: 90 attcattaacatatatatgaatgtgg 115
||||||||||| |||||||||||||
Sbjct: 63 attcattaacacctatatgaatgtgg 88
>RF00906;MIR1122;CR855160.1/66114-66007 4530:Oryza sativa (rice)
Length = 108
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatata 54
|||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 11 ctccgtttcatattataagactttctagcattgcccacattcatata 57
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccac 45
|||||||||| ||||||||||||||||||||||||||
Sbjct: 98 ctccgtttcatattataagactttctagcattgcccac 61
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 103 tatatgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
||||||||||||| |||| | |||||||||||||| ||||||||||| ||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| || |||||| |||||| | | ||||||||||||
Sbjct: 130 ttctagcatttcccacattcatattgatattaatgaatctagatagatatatatgtctag 71
Query: 90 attcattaacatatatatgaatgtgg 115
|||||||||||| |||| |||||||
Sbjct: 70 attcattaacatcaatataaatgtgg 45
Score = 58.0 bits (29), Expect = 4e-08
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 35 gcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctagattca 94
||||| |||||||| |||| ||||||||| |||||| || | |||| | ||||||||||
Sbjct: 38 gcatttcccacatttatattgatgttaatgaatctagacatatatatctatctagattca 97
Query: 95 ttaacatatatatgaatgtgg 115
|||| || ||||||||||||
Sbjct: 98 ttaatatcaatatgaatgtgg 118
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| | ||||||||||||| ||||||| |||||| | | ||||||||||||
Sbjct: 130 ttctagcatttctcacattcatatattagttaatgaatctagatagatatatatgtctag 71
Query: 90 attcattaacatatatatgaatgtgg 115
||||||||| || ||||||||||||
Sbjct: 70 attcattaatatcaatatgaatgtgg 45
Score = 65.9 bits (33), Expect = 2e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
||||| |||| ||||||||||||| || |||||| |||||| || | |||| | |||||
Sbjct: 33 ttctatcatttcccacattcatattgatattaatgaatctagacatatatatctatctag 92
Query: 90 attcattaacatatatatgaatgtg 114
|||||||||| |||||||||||||
Sbjct: 93 attcattaactaatatatgaatgtg 117
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| |||||||| |||||| | | ||||||||||||
Sbjct: 33 ttctagcatttcccacattcatattgttgttaatgaatctagatagatatatatgtctag 92
Query: 90 attcattaacatatatatgaatgtgg 115
|||||||| ||| ||||||||||||
Sbjct: 93 attcattaccatcaatatgaatgtgg 118
Score = 56.0 bits (28), Expect = 1e-07
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 36 cattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctagattcat 95
|||| ||||||||||||| ||| ||||| |||||| || | |||| | |||||||||||
Sbjct: 124 catttcccacattcatattgatggtaatgaatctagacatatatatctatctagattcat 65
Query: 96 taacatatatatgaatgtgg 115
||||| ||||||||||||
Sbjct: 64 taacaacaatatgaatgtgg 45
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacata 80
|||||||||||||||||| ||||||||||||| |||||||| |||||| ||||||||
Sbjct: 119 taagactttctagcattgtccacattcatatagatgttaataaatctagacacacata 62
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
|||||||||| |||||||| |||||||||||||||||| | ||||||||||| | |||
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtga 127
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 128 aacggagggagta 140
>RF00906;MIR1122;AAAA02022921.1/15118-15235 39946:Oryza sativa
Indica Group
Length = 118
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 90 attcattaacatatatatgaatgtggacaatacgagaaagtcttataacctgaaacggag 149
|||||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 70 attcattagcatttatatgaatgtggacaatactagaaagtcttatagtatgaaacggag 11
Query: 150 gtagta 155
| ||||
Sbjct: 10 ggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcat 51
|||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 108 ctccgtttcatattataagactttctagcattgcccatattcat 65
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatg 64
|||||||||| ||||||||||||||| |||| ||||||||||||| ||| |||||
Sbjct: 11 ctccgtttcatactataagactttctagtattgtccacattcatataaatgctaatg 67
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 106 atgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
|||||| ||| |||| | |||||||||||||| ||||||||||| ||||
Sbjct: 65 atgaatatgggcaatgctagaaagtcttataatatgaaacggaggaagta 114
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 75.8 bits (38), Expect = 2e-13
Identities = 110/133 (82%), Gaps = 2/133 (1%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||| ||||| |||||| ||||| ||||||||| |||||| ||| | |||
Sbjct: 26 taagactttctaccattgtccacat--atatagatgttaatgaatctagaaacatacata 83
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
| |||||||||||||| || || || |||||||||||| | | ||||||||| | |||
Sbjct: 84 tatctagattcattaatatctaaataaatgtggacaatgctaaaaagtcttacattgtga 143
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 144 aacggaggaagta 156
Score = 60.0 bits (30), Expect = 9e-09
Identities = 108/133 (81%), Gaps = 2/133 (1%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||| |||||||| ||||||| || || || |||||| |||||| | | |||
Sbjct: 135 taagactttttagcattgtccacatttatttagatattaatgaatctagatatatgtatg 76
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
| ||||||||||||||||| ||||| ||||||||||| ||||||||||| | |||
Sbjct: 75 tttctagattcattaacatctatat--atgtggacaatggtagaaagtcttacattatga 18
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 17 aacggagggagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 91/109 (83%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||| | |||||||||| ||||||||||||| || |||||| ||
Sbjct: 152 ctccgtttcacaatataagtcattctagcatttcccacattcatattgatattaatgaat 93
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtgga 116
|||| | | |||| | ||||||||||||||||| |||||||||||||
Sbjct: 92 ctagatatatatatttatctagattcattaacattaatatgaatgtgga 44
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 42 ccacattcatatatatgttaatgcatctaggcacacatatatgtctagattcattaacat 101
|||||||||||| ||||||||| |||||| | | |||||| |||||||||||||| ||
Sbjct: 45 ccacattcatattaatgttaatgaatctagataaatatatatatctagattcattaatat 104
Query: 102 atatatgaatgtgg 115
||||||||||||
Sbjct: 105 caatatgaatgtgg 118
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 73.8 bits (37), Expect = 6e-13
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 79 tatatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataac 138
||||||||||||||||||||||| ||||||||||||| |||| | |||||| |||| |
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 139 ctgaaacggaggtagta 155
||||||||||| ||||
Sbjct: 21 atgaaacggaggaagta 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctag 71
|||| ||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 26 taagtctttctagcattgcccacattcatatagatgttaatgaatctag 74
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 41 cccacattcatatatatgttaatgcatctaggcacacatatatgtctagattcattaaca 100
||||||||||||| || |||||| |||||| | | |||||||||||||||||||||||
Sbjct: 43 cccacattcatattgatattaatgaatctagatagatatatatgtctagattcattaaca 102
Query: 101 tatatatgaatgtggacaata 121
| ||||||||||||| ||||
Sbjct: 103 tcaatatgaatgtggaaaata 123
Score = 60.0 bits (30), Expect = 9e-09
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 42 ccacattcatatatatgttaatgcatctaggcacacatatatgtctagattcattaacat 101
|||||||||||| ||||||||| |||||| || | |||| | |||||||||||||| ||
Sbjct: 117 ccacattcatattgatgttaatgaatctagacatatatatctatctagattcattaatat 58
Query: 102 atatatgaatgtgg 115
||||||||||||
Sbjct: 57 caatatgaatgtgg 44
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
||||||||||||| | ||||||||| ||||||||| |||||| | | | |||| |||||
Sbjct: 130 ttctagcattgcctatattcatatagatgttaatgaatctagatatagacatatatctag 71
Query: 90 attcattaacatatatatgaatgtg 114
|||||||||||| |||||||||||
Sbjct: 70 attcattaacatccatatgaatgtg 46
Score = 60.0 bits (30), Expect = 9e-09
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||| ||| ||||||||||| ||||||||| |||||| | | | ||| |||||
Sbjct: 33 ttctagcaatgctcacattcatatggatgttaatgaatctagatatatgtctatatctag 92
Query: 90 attcattaacatatatatgaat 111
|||||||||||| |||||||||
Sbjct: 93 attcattaacatctatatgaat 114
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 79/93 (84%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||||||||| ||||||||||||||||||| ||| ||||| |||||| || ||||
Sbjct: 137 taagactttctaacattgcccacattcatatagatgctaatgaatctagacattattata 78
Query: 83 tgtctagattcattaacatatatatgaatgtgg 115
| | |||||| |||| ||| |||||||||||||
Sbjct: 77 tatatagatttattagcatctatatgaatgtgg 45
Score = 65.9 bits (33), Expect = 2e-10
Identities = 108/133 (81%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||| ||||||| |||||||||||||| ||| |||| ||||| | | | |
Sbjct: 26 taagactttatagcattacccacattcatatagatgctaataaatctatatatataataa 85
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||||||||||||||| ||| ||||||||||||| |||| ||||||||||| | |||
Sbjct: 86 tgtctagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtga 145
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 146 aacggagggagta 158
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 73.8 bits (37), Expect = 6e-13
Identities = 73/85 (85%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| |||| |||||||| ||||||||| |||||| | ||||||||||||
Sbjct: 33 ttctagcattacccatattcatatggatgttaatgaatctagttggatatatatgtctag 92
Query: 90 attcattaacatatatatgaatgtg 114
|||||||||||| |||||||||||
Sbjct: 93 attcattaacattaatatgaatgtg 117
Score = 52.0 bits (26), Expect = 2e-06
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| | ||||||||||| ||||||||| |||||| || | |||| ||||
Sbjct: 130 ttctagcatttctcacattcatattaatgttaatgaatctagacatatatatccaactag 71
Query: 90 attcattaacatatatatgaat 111
|||||||||||| ||||||||
Sbjct: 70 attcattaacatccatatgaat 49
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctag 71
||||||||||||||||||||||||| |||||| ||||||||| ||||||
Sbjct: 126 taagactttctagcattgcccacatacatatagatgttaatgaatctag 78
Score = 61.9 bits (31), Expect = 2e-09
Identities = 106/133 (79%), Gaps = 11/133 (8%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||||||||||||| |||||||| || ||||||||| |||||| |||
Sbjct: 26 taagactttctagcattgctcacattcacttagatgttaatgaatctagacac------- 78
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctga 142
||||||||||||||| |||||| |||||| |||| | ||||||||||| | |||
Sbjct: 79 ----tagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatga 134
Query: 143 aacggaggtagta 155
|||||||| ||||
Sbjct: 135 aacggagggagta 147
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 73.8 bits (37), Expect = 6e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaat 63
|||||||||||||||||||||||||||||||| ||||||||
Sbjct: 113 taagactttctagcattgcccacattcatatagatgttaat 73
Score = 71.9 bits (36), Expect = 2e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacc 139
||||||||||||| |||||||| ||||||||||||| |||| | ||||||||||| |
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattg 118
Query: 140 tgaaacggaggtagta 155
||||||||||| ||||
Sbjct: 119 tgaaacggaggaagta 134
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatata 54
|||||||||| || |||||||||||||||||| ||||||||||||
Sbjct: 11 ctccgtttcatattgtaagactttctagcattgttcacattcatata 57
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 103 tatatgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
|||||||||||| ||||| | ||||||||||| || ||||||||||| ||||
Sbjct: 57 tatatgaatgtgaacaatgctagaaagtcttacaatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 94/112 (83%), Gaps = 6/112 (5%)
Strand = Plus / Minus
Query: 26 gactttctagcattgcccacattcatatatatgttaatgcatctaggcaca--cat---- 79
||||||||| |||||||||||||||||| ||||||||| |||||| |||| ||
Sbjct: 112 gactttctaacattgcccacattcatatggatgttaatgaatctagacacattaatatcc 53
Query: 80 atatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtc 131
|||| ||||||||||||||||| |||||||||||| |||| | ||||||||
Sbjct: 52 atatatctagattcattaacatccatatgaatgtgggcaatgctagaaagtc 1
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 26 gactttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 1 gactttctagcattgcccacattcatatggatgttaatgaatctag 46
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtctta 134
||||||||||| ||||||| |||||||||||||||||| | |||||||||||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtctta 87
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcaca 76
|||||||||||||||||| ||||||||||||| ||||||| | |||||| ||||
Sbjct: 87 taagactttctagcattgtccacattcatatagatgttaacgaatctagacaca 34
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 69.9 bits (35), Expect = 1e-11
Identities = 71/82 (86%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 33 tagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctagatt 92
||||||| ||||||||||| || ||||||||| ||| || ||| ||||||| ||||||
Sbjct: 36 tagcatttcccacattcatgtagatgttaatgaatcaag--acatatatatgcatagatt 93
Query: 93 cattaacatatatatgaatgtg 114
||||||||| ||||||||||||
Sbjct: 94 cattaacatctatatgaatgtg 115
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 43 cacattcatatatatgttaatgcatctaggcacacatatatgtctagattcattaacata 102
|||||||||||| ||||||||| ||||| ||| | ||||||||| |||||||||||||
Sbjct: 115 cacattcatatagatgttaatgaatctatgcata--tatatgtcttgattcattaacatc 58
Query: 103 tatatgaatgtgg 115
|| ||||||||||
Sbjct: 57 tacatgaatgtgg 45
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||||||| ||||||| |||||| ||||||||| ||
Sbjct: 130 ctccgtttcacaatataagactttctagcattacccacatacatatagatgttaatgaat 71
Query: 68 cta 70
|||
Sbjct: 70 cta 68
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacc 139
|||||| ||||||||||||||| |||||| |||||| ||| | |||||||||||||
Sbjct: 61 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 120
Query: 140 tgaaacggaggtagta 155
||||||||||| ||||
Sbjct: 121 tgaaacggagggagta 136
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||||||| ||||||| |||||| ||||||||| ||
Sbjct: 11 ctccgtttcacaatataagactttctagcattacccacatacatatagatgttaatgaat 70
Query: 68 cta 70
|||
Sbjct: 71 cta 73
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 80 atatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacc 139
|||||| ||||||||||||||| |||||| |||||| ||| | |||||||||||||
Sbjct: 80 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 21
Query: 140 tgaaacggaggtagta 155
||||||||||| ||||
Sbjct: 20 tgaaacggagggagta 5
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 81 tatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtctta 134
||||||||||||||||||||| ||||| ||| |||||||| | |||||||||||
Sbjct: 63 tatgtctagattcattaacatctatataaatatggacaatgctagaaagtctta 116
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgtta 61
|||||||||||||||||||||||||| ||||| ||||||
Sbjct: 26 taagactttctagcattgcccacatttatatagatgtta 64
Score = 60.0 bits (30), Expect = 9e-09
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 6 ctctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgc 65
|||||||||||| | |||||||||||||||||| ||| ||| ||||| |||||||||
Sbjct: 133 ctctccgtttcataatgtaagactttctagcattgtccatatttatatagatgttaatga 74
Query: 66 atctag 71
||||||
Sbjct: 73 atctag 68
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatatatatgaatgtggacaatacgagaaagtctta 134
|||||||| |||||||| |||||||||||||||||| | |||||||||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtctta 26
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaat 63
|||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 26 taagactttctagcattgtccacattcatatagatgttaat 66
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| |||||| ||||| ||||||||| |||||| | | ||||||||||||
Sbjct: 33 ttctagcattttccacatccatattgatgttaatgaatctagatagatatatatgtctag 92
Query: 90 attcattaacatatatatgaatgtgg 115
||||||||||| ||||||||||||
Sbjct: 93 attcattaacaacaatatgaatgtgg 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||| ||| ||||||||||||| |||||||| |||||| || | |||| | |||||
Sbjct: 130 ttctagtatttcccacattcatattgttgttaatgaatctagacatatatatctatctag 71
Query: 90 attcattaacatatatatgaatgtgga 116
|||||||||||| ||||| |||||||
Sbjct: 70 attcattaacatcaatatggatgtgga 44
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgt 59
|||||||||||||||||||||||||||||||| ||||
Sbjct: 26 taagactttctagcattgcccacattcatatagatgt 62
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 27 actttctagcattgcccacattcatatatatgttaatgcatctaggcacaca 78
||||| |||||||||||||||||||||| ||||||||| || ||| ||||||
Sbjct: 117 actttttagcattgcccacattcatatagatgttaatgaatttagacacaca 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 83 tgtctagattcattaacatatatatgaatgtggacaat 120
|||||| |||||||||||| ||||||||||||| ||||
Sbjct: 70 tgtctaaattcattaacatctatatgaatgtgggcaat 107
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 98 acatatatatgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
|||| ||||||||||||| |||| | ||||||||||| | ||||||||||| ||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatatatatgaatgtg 114
|||||||||||||||||||||||| ||||||||||||
Sbjct: 55 atatatgtctagattcattaacatctatatgaatgtg 91
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||||| |||||||||||| ||||||||| ||||||
Sbjct: 104 ttctagcattgcacacattcatatagatgttaatgaatctag 63
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| |||||||||||| ||| |||||| |||||| | | ||||||||||||
Sbjct: 33 ttctagcatttcccacattcatacttatattaatgaatctagacggatatatatgtctag 92
Query: 90 attcattaacatatatatgaatgtg 114
|||||||| ||| ||||| |||||
Sbjct: 93 attcattagcatcaatatggatgtg 117
Score = 46.1 bits (23), Expect = 1e-04
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 33 tagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctagatt 92
||||||| | ||||| ||||| ||| ||||| |||||| || | |||| |||||||||
Sbjct: 127 tagcatttctcacatccatattgatgctaatgaatctagacatatatatccgtctagatt 68
Query: 93 cattaacatatatatgaatgtgg 115
|||||| ||| |||||||||||
Sbjct: 67 cattaatataagtatgaatgtgg 45
>RF00906;MIR1122;AACV01013308.1/27395-27278 39947:Oryza sativa
Japonica Group
Length = 118
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatg 64
|||||||||| |||||||||||||||||||| |||| ||||||||| ||| |||||
Sbjct: 108 ctccgtttcatattataagactttctagcattacccatattcatatagatgataatg 52
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcat 51
|||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 11 ctccgtttcatattataagactttctaacattgcccacattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 90 attcattaacatatatatgaatgtggacaatacgagaaagtcttataacctgaaacggag 149
|||||||| ||| ||||||||| ||| ||| | |||||||||||||| ||||||||||
Sbjct: 49 attcattatcatctatatgaatatgggtaatgctagaaagtcttataatatgaaacggag 108
Query: 150 gtagta 155
| ||||
Sbjct: 109 gaagta 114
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 106 atgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
|||||||||| |||| |||||||||||||| ||||||||||| ||||
Sbjct: 54 atgaatgtgggcaatgttagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||||||||||| |||| ||||||||| ||| ||||| ||
Sbjct: 134 ctccgtttcataatataagactttctagcattacccatattcatatagatgctaatgaat 75
Query: 68 ctag 71
||||
Sbjct: 74 ctag 71
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 21 tataagactttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||| |||||||||||||| || ||||||||| ||||||||| ||||||
Sbjct: 24 tataagtctttctagcattgctcatattcatatagatgttaatgaatctag 74
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctgaaa 144
||||||||||||| ||| ||||||||| ||| ||| | ||||||||||||| |||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 145 cggaggtagta 155
|||||| ||||
Sbjct: 130 cggagggagta 140
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatatatatgaatgtggacaatacgagaaagtcttata 136
||||||||||||||||| ||||||||| || |||| | |||||| ||||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttata 24
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 81 tatgtctagattcattaacatatatatgaatgtggacaat 120
|||||||||||| |||||||| ||||||||||||||||||
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaat 102
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaat 63
||||||||||| ||||||||||||| ||||||||
Sbjct: 109 ttctagcattgtccacattcatatagatgttaat 76
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 83/100 (83%)
Strand = Plus / Plus
Query: 56 atgttaatgcatctaggcacacatatatgtctagattcattaacatatatatgaatgtgg 115
||||||||| |||||| | | ||||||||||||||||||||| || ||||||||||||
Sbjct: 59 atgttaatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgg 118
Query: 116 acaatacgagaaagtcttataacctgaaacggaggtagta 155
||||| |||| |||||| | ||||||||||| ||||
Sbjct: 119 gaaatactagaatgtcttacattgtgaaacggagggagta 158
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
|||||| |||||| ||| ||||||||||||| || |||||| |||||| || | ||||
Sbjct: 137 taagacattctagtatttcccacattcatattgatattaatgaatctagacatatatatc 78
Query: 83 tgtctagattcattaacat 101
| |||||||||||||||||
Sbjct: 77 tatctagattcattaacat 59
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 33 tagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctagatt 92
|||||||||||||||||||||| ||| ||||| ||||| || | | ||| ||||||||
Sbjct: 127 tagcattgcccacattcatatagatggtaatgaatctaaacatatgtctatatctagatt 68
Query: 93 cattaacatatatatg 108
||||||||| ||||||
Sbjct: 67 cattaacatctatatg 52
Score = 61.9 bits (31), Expect = 2e-09
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
||||||| || |||| || |||||| ||||||||| |||||| | | | |||||| |||
Sbjct: 33 ttctagccttacccatatgcatatagatgttaatgaatctagatatagacatatgtttag 92
Query: 90 attcattaacatatatatgaatgtggacaat 120
|||||||| ||| ||||||||||||| ||||
Sbjct: 93 attcattaccatctatatgaatgtgggcaat 123
>RF00906;MIR1122;AAAA02025638.1/15493-15356 39946:Oryza sativa
Indica Group
Length = 138
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgt 59
|||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 11 ctccgtttcataatataagactttctagcattgcccacatctatatatatgt 62
Score = 61.9 bits (31), Expect = 2e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 21 tataagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacata 80
|||||||||||||| |||||||||||| ||||| ||||||||| ||||| |||| |||
Sbjct: 115 tataagactttctaacattgcccacatatatatagatgttaatgaatctaaacacatata 56
Query: 81 tat 83
|||
Sbjct: 55 tat 53
Score = 52.0 bits (26), Expect = 2e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataa 137
|||| ||| ||||||||||||||| ||||| |||||| |||| |||||||||||||
Sbjct: 57 atatgtgtttagattcattaacatctatatatatgtgggcaatgttagaaagtcttatat 116
Query: 138 cctgaaacggaggtagta 155
| ||||||||||||||
Sbjct: 117 tgtaaaacggaggtagta 134
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| |||||||||||| ||||||||| |||||| || | |||| | |||||
Sbjct: 134 ttctagcatttcccacattcatagtgatgttaatgaatctagacatatatatctatctag 75
Query: 90 attcattaacat 101
||||||||||||
Sbjct: 74 attcattaacat 63
Score = 56.0 bits (28), Expect = 1e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 56 atgttaatgcatctaggcacacatatatgtctagattcattaacatatatatgaatgtgg 115
||||||||| |||||| | | |||||||||||||||||||||||| |||||||||||
Sbjct: 63 atgttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtgg 122
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 89/108 (82%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||| | |||||||||| | ||||||||||| || ||||| ||
Sbjct: 11 ctccgtttcacaatataagtcattctagcatttctcacattcatattgatactaatgaat 70
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtgg 115
|||| | | |||||||||||||||||||| ||| ||||||||||||
Sbjct: 71 ctagatagatatatatgtctagattcattagcatcaatatgaatgtgg 118
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 78/93 (83%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacatata 82
||||||||| |||| |||||||||||||| || ||||||||| |||||| ||||||
Sbjct: 26 taagactttgtagcgttgcccacattcatttagatgttaatgaatctag----acatatg 81
Query: 83 tgtctagattcattaacatatatatgaatgtgg 115
| | ||||||||||||||| | |||| ||||||
Sbjct: 82 tatttagattcattaacatctttatgtatgtgg 114
Score = 61.9 bits (31), Expect = 2e-09
Identities = 89/108 (82%), Gaps = 4/108 (3%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| ||||||||||| ||||| | ||||||| |||| | ||||||||| ||
Sbjct: 148 ctccgtttcacaatataagactttttagcactacccacatacataaagatgttaatgaat 89
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtgg 115
||| ||| ||||||||||||||||||||| || ||||||||||
Sbjct: 88 ctaaataca----tatgtctagattcattaacatctaaatgaatgtgg 45
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatat 53
|||||||||||||||||||||||||||||||
Sbjct: 105 taagactttctagcattgcccacattcatat 75
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 75 cacatatatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtctta 134
||||| |||||||| |||||||| || |||||||||||| |||| | |||||||||||
Sbjct: 46 cacatttatgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtctta 105
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 33 tagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctagatt 92
||||||| |||||||||||| ||| ||||| || ||| | | |||||||||||||||
Sbjct: 36 tagcattttccacattcatatttatattaataaatttagctaaatatatatgtctagatt 95
Query: 93 cattaacatatatatgaatgtgg 115
||||||||| ||||||||||||
Sbjct: 96 cattaacatcaatatgaatgtgg 118
Score = 61.9 bits (31), Expect = 2e-09
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| ||||||||| |||||| || | |||| | |||
Sbjct: 130 ttctagcatttcccacattcatattgatgttaatgaatctagacatatatatttagctaa 71
Query: 90 attcattaacatatatatgaatgtgga 116
||| ||||| ||| |||||||||||||
Sbjct: 70 atttattaatataaatatgaatgtgga 44
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatat 53
|||||||||||||||||||||||||||||||
Sbjct: 109 taagactttctagcattgcccacattcatat 79
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 26 taagactttctagcattgcccacatttttatggatgttaatgaatctag 74
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatatatatgaatgtggacaatacgagaaagtctta 134
||||||||||||||||| ||| ||||||| |||| | |||||||||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtctta 26
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| |||||||||||| ||||||||| |||||| || | |||| | | |||
Sbjct: 33 ttctagcatttcccacattcatagtgatgttaatgaatctagacatatatatctatttag 92
Query: 90 attcattaacatatatatgaatgtgga 116
||||||||| || |||||||||||||
Sbjct: 93 attcattaatatcaatatgaatgtgga 119
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatatatatgaatgtgg 115
|||||||||||||||||||||||| |||||||||||
Sbjct: 82 atatatgtctagattcattaacatcactatgaatgtgg 45
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 61.9 bits (31), Expect = 2e-09
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 33 tagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctagatt 92
||||||| |||||||| |||| ||||||||| |||||| | | |||||||||||||||
Sbjct: 127 tagcatttcccacatttatattgatgttaatgaatctagatagaaatatatgtctagatt 68
Query: 93 cattaacatatatatgaatgtgg 115
||| ||||| |||| |||||||
Sbjct: 67 cataaacatcaatataaatgtgg 45
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| | ||||||| |||||| | | |||||| |||||
Sbjct: 33 ttctagcatttcccacattcatattgacgttaatgaatctagatagatatatatttctag 92
Query: 90 attcattaacatatatatgaatgtgg 115
|||||||| ||| |||| |||||||
Sbjct: 93 attcattaccatcaatattaatgtgg 118
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||||||||||| |||||| ||||||||| ||||||
Sbjct: 104 ttctagcattgcccacatgcatatagatgttaatgaatctag 63
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 84 gtctagattcattaacatatatatgaatgtggacaat 120
|||||||||||||||||| |||||| |||||| ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaat 97
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatatatatgaatgtgg 115
|||||||||||||||||||||||| ||||||||||||
Sbjct: 82 atatatgtctagattcattaacatcaatatgaatgtgg 45
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatg 64
|||||||||||||| ||||||||||||||||| || ||||||
Sbjct: 93 taagactttctagcgttgcccacattcatatagatattaatg 52
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
||||| |||| ||||||||||||| || |||||| |||||| || | |||| | |||||
Sbjct: 33 ttctaacatttcccacattcatattgatattaatgaatctagacatatatatctatctag 92
Query: 90 attcattaacatatatatgaatgtggacaatacgagaa 127
||||||||| || ||||||||||| | ||||| ||||
Sbjct: 93 attcattaaaatcaatatgaatgtgaaaaatactagaa 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 43 cacattcatatatatgttaatgcatctaggcacacatatatgtctagattcattaacata 102
||||||||||| || |||||| |||||| | | ||||||||||||||||||||| ||
Sbjct: 117 cacattcatattgattttaatgaatctagatagatatatatgtctagattcattaatatc 58
Query: 103 tatatgaatgtgg 115
||||||||||||
Sbjct: 57 aatatgaatgtgg 45
>RF00906;MIR1122;AAAA02033121.1/1765-1675 39946:Oryza sativa
Indica Group
Length = 91
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccac 45
|||||||||| ||||||||||||||||||||||||||
Sbjct: 81 ctccgtttcatattataagactttctagcattgcccac 44
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 gtttcaggttataagactttctagca 37
||||||||||||||||||||||||||
Sbjct: 15 gtttcaggttataagactttctagca 40
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 124 agaaagtcttataacctgaaacggaggtagta 155
|||||||||||||||||||||| |||| ||||
Sbjct: 36 agaaagtcttataacctgaaacagagggagta 5
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatatatatgaatgtgg 115
||||||||||||||||||||| ||| ||||||||||||
Sbjct: 58 atatatgtctagattcattaatataaatatgaatgtgg 95
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||| ||||||||||||| ||| |||||| ||||||
Sbjct: 107 ttctagcatttcccacattcatatttatattaatgaatctag 66
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 79 tatatgtctagattcattaacatatatatgaatgtgga 116
||||||||||||||||||||||| |||||||||||||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtgga 100
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 79 tatatgtctagattcattaacatatatatgaatgtgg 115
||||||||||||||||||||||| ||||||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgg 45
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 66 atctaggcacacatatatgtctagattcattaacatatatatgaatgtg 114
|||||| || ||||||||||||||||||||| |||| |||||||||||
Sbjct: 69 atctagacatacatatatgtctagattcattgacatcaatatgaatgtg 117
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| | ||||||||||| |||| |||| |||||| || | || |||||||||
Sbjct: 130 ttctagcatttctcacattcatattgatgtcaatgaatctagacatatatgtatgtctag 71
Query: 90 attca 94
|||||
Sbjct: 70 attca 66
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatcta 70
|||||||||| |||||||||||||| ||||||||| |||||
Sbjct: 33 ttctagcatttcccacattcatatagatgttaatgaatcta 73
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 87 tagattcattaacatatatatgaatgtgg 115
||||||||||||||| |||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgg 45
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
||||| |||| | ||||||||||| ||||||||| |||||| | | ||||||||||||
Sbjct: 33 ttctaccatttctcacattcatattgatgttaatgaatctagatagatatatatgtctag 92
Query: 90 attcattaa 98
|||||||||
Sbjct: 93 attcattaa 101
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 59 ttaatgcatctaggcacacatatatgtctagattcattaacatatatatgaatgtg 114
|||||| |||||| || | |||| | ||||||||||||||||| |||||||||||
Sbjct: 101 ttaatgaatctagacatatatatctatctagattcattaacatcaatatgaatgtg 46
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 58.0 bits (29), Expect = 4e-08
Identities = 70/84 (83%), Gaps = 6/84 (7%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| ||| ||||| |||||| ||||||||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgctaatgaatctag------atatatgtctag 86
Query: 90 attcattaacatatatatgaatgt 113
|||||||| ||| ||||||||||
Sbjct: 87 attcattagcatcaatatgaatgt 110
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 79 tatatgtctagattcattaacatatatatgaatgtg 114
|||||||||||||||||| ||||| |||||||||||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtg 97
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||| | ||||||||||| ||||| |||| ||||||
Sbjct: 110 ttctagcatttctcacattcatatttatgtcaatgaatctag 69
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 56.0 bits (28), Expect = 1e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacc 139
|||||| ||||||||||||||| ||||||||||||| ||| | |||| | ||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 140 tgaaacggaggtagta 155
||||||||||| ||||
Sbjct: 125 tgaaacggagggagta 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||| | |||||||||| |||||||||||| ||||||||| ||
Sbjct: 134 ctccgtttcacaatataagtcattctagcattttccacattcatattgatgttaatgaat 75
Query: 68 cta 70
|||
Sbjct: 74 cta 72
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaat 63
|||||||||| ||||||||||||| ||||||||
Sbjct: 33 ttctagcatttcccacattcatattaatgttaat 66
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 56.0 bits (28), Expect = 1e-07
Identities = 88/107 (82%), Gaps = 2/107 (1%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||| | |||| ||||| |||||||||||| ||||||||| ||
Sbjct: 11 ctccgtttcacaatataagtcattctggcatttcccacattcatactcatgttaatgaat 70
Query: 68 ctaggcacacatatatgtctagattcattaacatatatatgaatgtg 114
||| ||| |||||| ||||||||||||||||| ||||||||||
Sbjct: 71 ttag--acatatatatatctagattcattaacatgagtatgaatgtg 115
Score = 46.1 bits (23), Expect = 1e-04
Identities = 71/86 (82%), Gaps = 2/86 (2%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| |||||||||| ||||||||| |||||| | | |||||||||||
Sbjct: 128 ttctagcatttttcacattcatactcatgttaatgaatctag--atatatatatgtctaa 71
Query: 90 attcattaacatatatatgaatgtgg 115
|||||||||||| |||||||||||
Sbjct: 70 attcattaacatgagtatgaatgtgg 45
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 24 aagactttctagcattgcccacattcatatatatgttaatgcatctag 71
||||||||| ||||||||||||||||| ||| | ||||||| ||||||
Sbjct: 141 aagactttccagcattgcccacattcacatagaagttaatgaatctag 94
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatat 53
|||||||||| ||||||||||||||||||||
Sbjct: 81 taagactttccagcattgcccacattcatat 51
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 80 atatgtctagattcattaacatatatatgaatgtggacaat 120
|||||||||||||||||||| | ||| ||||||||| ||||
Sbjct: 54 atatgtctagattcattaacttctatgtgaatgtgggcaat 14
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 24 aagactttctagcattgcccacattcatatatatgttaatgcatctag 71
|||| |||| ||||||||||||||||| ||| | ||||||| ||||||
Sbjct: 1 aagattttccagcattgcccacattcacatagaagttaatgaatctag 48
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 82 atgtctagattcattaacatatatatgaatgtggacaatacgagaaagtctt 133
|||||||||||||||||| | ||| ||||||||| |||| | |||||||||
Sbjct: 90 atgtctagattcattaacttctatgtgaatgtgggcaatgctggaaagtctt 141
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 77 catatatgtctagattcattaacatatatatgaatgtgga 116
||||||| ||||||||||||||||| |||||||||||||
Sbjct: 52 catatatatctagattcattaacatcaatatgaatgtgga 91
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatata 54
|||||||||||||||||||||| |||||||||
Sbjct: 26 taagactttctagcattgcccatattcatata 57
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa
Indica Group
Length = 124
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatata 54
|||||||||||||| |||||||||||||||||
Sbjct: 26 taagactttctagcgttgcccacattcatata 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatata 54
||||| ||||||||||||||||||||||||||
Sbjct: 99 taagagtttctagcattgcccacattcatata 68
>RF00906;MIR1122;AP004378.5/62127-62235 39947:Oryza sativa
Japonica Group
Length = 109
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 21 tataagactttctagcattgcccacattcatatata 56
|||||||||||||||||||| ||| |||||||||||
Sbjct: 86 tataagactttctagcattgtccatattcatatata 51
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 101 tatatatgaatgtggacaatacgagaaagtcttata 136
||||||||||| |||||||| | |||||||||||||
Sbjct: 51 tatatatgaatatggacaatgctagaaagtcttata 86
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 46 attcatatatatgttaatgcatctaggcacacatatatgtctagattcattaacatatat 105
||||||||| ||| ||||| ||||| | || |||||||| || |||||||| ||| |||
Sbjct: 49 attcatatagatgctaatgaatctatacgcatatatatgtttaaattcattagcatctat 108
Query: 106 atgaatgtgga 116
|||||||||||
Sbjct: 109 atgaatgtgga 119
Score = 44.1 bits (22), Expect = 6e-04
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| ||| ||||| || || || | |||| || |||
Sbjct: 130 ttctagcattttccacattcatatagatgctaatgaatttaaacatatatatgcgtatag 71
Query: 90 attcattaacatatatatgaat 111
|||||||| ||| |||||||||
Sbjct: 70 attcattagcatctatatgaat 49
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 88 agattcattaacatatatatgaatgtggacaatacgagaaagtctta 134
|||||||||||||| || || |||||||||||||| |||||| ||||
Sbjct: 51 agattcattaacatctaaataaatgtggacaatactagaaagcctta 97
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa
Japonica Group
Length = 137
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatat 53
|||||||||| ||||||||||||||||||||
Sbjct: 59 taagactttccagcattgcccacattcatat 89
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 26 gactttctagcattgcccacattcatatatatgttaatgcatctag 71
||||||| ||||||||||||||||| ||| | ||||||| ||||||
Sbjct: 1 gactttccagcattgcccacattcacatagaagttaatgaatctag 46
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattaacatatatatgaatgtggacaat 120
|||||||||||||||||||| | ||| ||||||||| ||||
Sbjct: 86 atatgtctagattcattaacttctatgtgaatgtgggcaat 126
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 82 atgtctagattcattaacatatatatgaatgtggacaat 120
|||||||||||||||||| | ||| ||||||||| ||||
Sbjct: 50 atgtctagattcattaacttctatgtgaatgtgggcaat 12
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 29 tttctagcattgcccacattcatatatatgttaatgcatctag 71
|||| ||||||||||||||||| ||| | ||||||| ||||||
Sbjct: 134 tttccagcattgcccacattcacatagaagttaatgaatctag 92
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 54.0 bits (27), Expect = 6e-07
Identities = 78/94 (82%), Gaps = 2/94 (2%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||| | || ||||||| |||| |||||||| ||||||||| ||
Sbjct: 143 ctccgtttcacaatataagtcattttagcatttcccatattcatattgatgttaatgaat 84
Query: 68 ctaggcacacatatatgtctagattcattaacat 101
|||| ||| |||| | |||||||||||||||||
Sbjct: 83 ctag--acatatatctatctagattcattaacat 52
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatatatatgaat 111
|||||||||||||||||||||||| ||||||||
Sbjct: 72 atatatgtctagattcattaacatcaatatgaat 105
>RF00906;MIR1122;AP004026.3/36995-37112 39947:Oryza sativa
Japonica Group
Length = 118
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatata 54
|||||||||| |||||||||||| ||||||| |||||||||||||
Sbjct: 11 ctccgtttcatattataagactttatagcattatccacattcatata 57
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatata 54
|||||||||| |||||||||||||||||||| ||||||| |||||
Sbjct: 108 ctccgtttcatattataagactttctagcattatccacatttatata 62
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 103 tatatgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
|||||||||||||| ||| | | |||||||||||| ||||||||||| ||||
Sbjct: 57 tatatgaatgtggataatgctataaagtcttataatatgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 103 tatatgaatgtggacaatacgagaaagtcttataacctgaaacggaggtagta 155
||||| |||||||| ||| | |||||||||||||| ||||||||||| ||||
Sbjct: 62 tatataaatgtggataatgctagaaagtcttataatatgaaacggaggaagta 114
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 54.0 bits (27), Expect = 6e-07
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| || | |||||||| ||||||||| |||||| | | ||| |||||||
Sbjct: 33 ttctagcatttcctatattcatattgatgttaatgaatctagatagatatagatgtctat 92
Query: 90 attcattaacatatatatgaatg 112
|||||||||||| |||||||||
Sbjct: 93 attcattaacatcaatatgaatg 115
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 54.0 bits (27), Expect = 6e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||| | |||||||||| ||||||||||||| ||||||||| ||
Sbjct: 134 ctccgtttcacaatataagtcattctagcatttcccacattcatattgatgttaatgaat 75
Query: 68 cta 70
|||
Sbjct: 74 cta 72
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattaacatatatatgaatgtgg 115
|||||| ||||||||||||||| ||||||||||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgg 100
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaat 63
|||||||||| ||||||||||||| ||||||||
Sbjct: 33 ttctagcatttcccacattcatattaatgttaat 66
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatatatatgaatgtgg 115
|||||||||||||| ||||||||| ||||||||||||
Sbjct: 52 atatatgtctagatccattaacatcaatatgaatgtgg 89
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 101 ttctagcatttcccacattcatattgatgttaatggatctag 60
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatatatatgaat 111
|||||||||||||||||||||||| ||||||||
Sbjct: 82 atatatgtctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 52.0 bits (26), Expect = 2e-06
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| |||||||| ||| ||||||||| ||||| | | ||||||||||||
Sbjct: 33 ttctagcattttccacattcgtattgatgttaatgactctagatagatatatatgtctag 92
Query: 90 attcattaacatatatatgaat 111
|||||||| ||| ||||||||
Sbjct: 93 attcattagcatcaatatgaat 114
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctag 74
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 82 atgtctagattcattaacatatatatgaatgtgg 115
|||||||||||||||||||| ||||||||||||
Sbjct: 78 atgtctagattcattaacatcaatatgaatgtgg 45
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 121 ttctagcatttcccacattcatattgatgttaatgaatctag 80
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 7 ttctagcatttcccacattcatattgatgttaatgtatctag 48
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 117 ttctagcatttcccacattcatattgatgttaatgtatctag 76
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatctaggcaca 76
||||||||||||||||| ||| ||||||||| ||||||| | |||||| ||||
Sbjct: 26 taagactttctagcattaaccatattcatatagatgttaacgaatctagacaca 79
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 83 tgtctagattcattaacatatatatgaatgtggacaatacgagaaagtctta 134
||||||||||| ||||||| ||||||||| ||| ||| | |||||||||||
Sbjct: 77 tgtctagattcgttaacatctatatgaatatggttaatgctagaaagtctta 26
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa
Japonica Group
Length = 160
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||| ||||||||||||| ||||||||| ||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatgaatctag 74
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatatatatgaatgtgg 115
||||||||||||||||| ||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgg 45
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 77 catatatgtctagattcattaacatatatatgaatgtg 114
||||| ||||||||||||||||||| |||||||||||
Sbjct: 83 catatttgtctagattcattaacatcaatatgaatgtg 46
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatatatatgaat 111
|||||||||||||||||||||||| ||||||||
Sbjct: 79 atatatgtctagattcattaacatcaatatgaat 112
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatatatatgaat 111
|||||||||||||||||||||||| ||||||||
Sbjct: 82 atatatgtctagattcattaacatcaatatgaat 49
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatatatatgaatgtgg 115
|||||||||||||||||||||||| |||| |||||||
Sbjct: 82 atatatgtctagattcattaacattaatataaatgtgg 45
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatg 64
|||||||||| ||||||||||||| |||||||||
Sbjct: 120 ttctagcatttcccacattcatattgatgttaatg 86
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa
Japonica Group
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgtt 60
||||||||||||||||||| || ||||||||| |||||
Sbjct: 87 taagactttctagcattgctcatattcatatagatgtt 50
>RF00906;MIR1122;AACV01022580.1/283-156 39947:Oryza sativa
Japonica Group
Length = 128
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcat 51
||||||||| |||||||||||||||||||
Sbjct: 26 taagactttttagcattgcccacattcat 54
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 87 tagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctgaaacg 146
|||||| |||||||| || ||||||||| ||||| ||||||||||||| |||||||
Sbjct: 56 tagatttattaacatctaaatgaatgtgtgcaatattagaaagtcttatattgtgaaacg 115
Query: 147 gaggtagta 155
|||| ||||
Sbjct: 116 gagggagta 124
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaat 63
|||||||||| |||||||||||||| ||||| ||||||||| || ||||||||
Sbjct: 118 ctccgtttcacaatataagactttctaatattgcacacattcatttagatgttaat 63
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatatatatgaatgtg 114
|||||||||||||||||||| ||| |||||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtg 84
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatcta 70
|||||||||| ||||||||||||| ||||||||| |||||
Sbjct: 118 ttctagcatttcccacattcatattgatgttaatgtatcta 78
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||| |||||||||||| ||||||||| ||||||
Sbjct: 33 ttctagcattttccacattcatattgatgttaatgtatctag 74
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 50.1 bits (25), Expect = 9e-06
Identities = 70/85 (82%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| |||||||| |||| |||||||| |||||| || | |||| | | |||
Sbjct: 33 ttctagcatttcccacatttatattggtgttaatgaatctagacatatatatctatttag 92
Query: 90 attcattaacatatatatgaatgtg 114
||||||||| || |||||||||||
Sbjct: 93 attcattaatatcaatatgaatgtg 117
Score = 48.1 bits (24), Expect = 4e-05
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 21 tataagactttctagcattgcccacattcatatatatgttaatgcatctaggcacacata 80
|||||| | |||||||||| ||||||||||| || |||||| ||||| | | |||
Sbjct: 139 tataagtcattctagcatttttcacattcatattgatattaatgaatctaaatagatata 80
Query: 81 tatgtctagattcattaaca 100
||||||||||||||||||||
Sbjct: 79 tatgtctagattcattaaca 60
>RF00906;MIR1122;AAAA02021108.1/39171-39038 39946:Oryza sativa
Indica Group
Length = 134
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 25 agactttctagcattgcccacattcatatatatgttaatgc 65
|||||||| ||||||||||| ||||||||| ||| ||||||
Sbjct: 57 agactttcaagcattgcccatattcatatagatgctaatgc 97
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 21 tataagactttctagcattgcccacattcatata 54
|||||||||||| |||||||| || |||||||||
Sbjct: 24 tataagactttcaagcattgcacatattcatata 57
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatcta 70
|||||||||| ||||||||||||| ||||||||| |||||
Sbjct: 102 ttctagcatttcccacattcatattgatgttaatgaatcta 62
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 87 tagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacctgaaacg 146
||||||||||||||| ||||||||||||| ||||| | || | |||||| |||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 147 gaggtagta 155
|||| ||||
Sbjct: 122 gaggaagta 130
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||| | |||||||||| ||||||||||||| ||| ||||| ||
Sbjct: 126 ctccgtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaat 67
Query: 68 ctag 71
||||
Sbjct: 66 ctag 63
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 48.1 bits (24), Expect = 4e-05
Identities = 64/76 (84%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 80 atatgtctagattcattaacatatatatgaatgtggacaatacgagaaagtcttataacc 139
|||||| |||||||| |||||| || |||||||||| |||| | ||||||||||| |
Sbjct: 65 atatgtttagattcaataacatctaaatgaatgtgg-caatgctagaaagtcttacattg 123
Query: 140 tgaaacggaggtagta 155
||||||||||| ||||
Sbjct: 124 tgaaacggaggaagta 139
Score = 48.1 bits (24), Expect = 4e-05
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatcta 70
|||||||||||||||||| |||||||||| || |||||| || |||||
Sbjct: 118 taagactttctagcattg-ccacattcatttagatgttattgaatcta 72
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 23 taagactttctagcattgcccacattcatatatatgttaatgcatcta 70
||||| ||||||||||||||||||| | ||| ||||||||| |||||
Sbjct: 26 taagattttctagcattgcccacatatacatagatgttaatgaatcta 73
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 21 tataagactttctagcattgcccacattcat 51
||||||||||||||||||| | |||||||||
Sbjct: 119 tataagactttctagcattactcacattcat 89
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 48.1 bits (24), Expect = 4e-05
Identities = 75/92 (81%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| |||||||||||| ||| |||| |||||| || | |||| | |||||
Sbjct: 33 ttctagcattttccacattcatatcgatgccaatgaatctagacatatatatctatctag 92
Query: 90 attcattaacatatatatgaatgtggacaata 121
|||||||| ||| ||||| ||||| ||||||
Sbjct: 93 attcattagcatcaatatggatgtgaacaata 124
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatatatatgaatgtgga 116
||||||||||||||||||| ||| |||||||||||||
Sbjct: 82 atatatgtctagattcattggcatcgatatgaatgtgga 44
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 80 atatgtctagattcattaacatatatatgaatgtgg 115
|||||| ||||||||||||||| ||||||||||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgg 45
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||| | |||||||||| ||||||||||||| ||| ||||| ||
Sbjct: 11 ctccgtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaat 70
Query: 68 ctag 71
||||
Sbjct: 71 ctag 74
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 48.1 bits (24), Expect = 4e-05
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| | ||||||||||| ||| ||||| |||||| | | |||||| |||||
Sbjct: 33 ttctagcatttctcacattcatattgatggtaatgaatctagataga-atatatatctag 91
Query: 90 attcattaacat 101
||||||||||||
Sbjct: 92 attcattaacat 103
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||| | ||||| |||| ||||||||||||| ||||||||| ||
Sbjct: 129 ctccgtttcacaatataagtcattctaacatttcccacattcatattgatgttaatgaat 70
Query: 68 ctag 71
||||
Sbjct: 69 ctag 66
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatatatatgaatgtgg 115
||||||||||||||||| ||||||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgg 95
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatatatatgaatgtgga 116
||||||||||||||||| |||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgga 44
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||| |||||||||||| ||||||||| ||||||
Sbjct: 33 ttctagcattttccacattcatattgatgttaatgaatctag 74
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 83 tgtctagattcattaacatatatatgaatgtg 114
||||||||||||||||||| |||||||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtg 106
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||| | |||||||||| | ||||||||||| ||||||||| ||
Sbjct: 121 ctccgtttcacaatataagtcattctagcatttctcacattcatattgatgttaatgaat 62
Query: 68 ctag 71
||||
Sbjct: 61 ctag 58
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatatatatgaatgtg 114
||||||||||||||||| |||||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtg 86
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatatatatgaatgtgg 115
||||||||||||||||| ||||||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgg 46
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatg 64
|||||||||| ||||||||||||| |||||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatg 67
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 81 tatgtctagattcattaacatatatatgaatgtgg 115
||||||||| ||||||||||| ||||||||||||
Sbjct: 72 tatgtctagtttcattaacatcaatatgaatgtgg 106
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatg 64
|||||||||| ||||||||||||| |||||||||
Sbjct: 118 ttctagcatttcccacattcatattgatgttaatg 84
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 87 tagattcattaacatatatatgaatgtgga 116
||||||||||||||| |||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgga 44
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatatatatgaatgtgg 115
||||||||||||||||| ||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgg 45
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatatatatgaatgtgg 115
||||||||||||||||| ||||||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgg 106
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatatatatgttaatgcat 67
|||||||||| |||||| | ||||||||| ||||||||||||| ||||||||| ||
Sbjct: 126 ctccgtttcacaatataagtcattctagcatatcccacattcatattgatgttaatgaat 67
Query: 68 cta 70
|||
Sbjct: 66 cta 64
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 82 atgtctagattcattaacatatatatgaatgtgg 115
|||| ||||||||||||||| ||||||||||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgg 92
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 46.1 bits (23), Expect = 1e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatatatatgaatgtgga 116
||||||||||||||||||| ||| |||||||||||||
Sbjct: 82 atatatgtctagattcattggcatcgatatgaatgtgga 44
Score = 44.1 bits (22), Expect = 6e-04
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| |||||||||||| ||| |||| |||||| || | |||| | |||||
Sbjct: 33 ttctagcattttccacattcatatcgatgccaatgaatctagacatatatatttatctag 92
Query: 90 attcattaacatatatatgaatgtggacaatacgagaa 127
|||||||| ||| ||||| ||||| | ||||| ||||
Sbjct: 93 attcattagcatcgatatggatgtgaaaaatactagaa 130
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 70/86 (81%), Gaps = 6/86 (6%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| |||| |||| |||||| || | |||||||
Sbjct: 124 ttctagcatttcccacattcatattgatgtcaatgaatctagacaga------tgtctag 71
Query: 90 attcattaacatatatatgaatgtgg 115
||||||| |||| ||||||||||||
Sbjct: 70 attcattgacatcaatatgaatgtgg 45
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatg 64
|||||||||| ||||||||||||| |||||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgttaatg 67
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 23 taagactttctagcattgcccacattcatat 53
|||||| |||||||||| |||||||||||||
Sbjct: 111 taagacattctagcatttcccacattcatat 81
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatg 64
|||||||||| ||||||||||||| |||||||||
Sbjct: 102 ttctagcatttcccacattcatatcgatgttaatg 68
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatatatatgaatgtgg 115
||||||||||||||||| ||||||||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgg 96
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
||||| |||| ||||||||||||| ||||||||| ||||||
Sbjct: 108 ttctaacatttcccacattcatattgatgttaatgaatctag 67
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaat 63
|||||||||| ||||||||||||| ||||||||
Sbjct: 109 ttctagcatttcccacattcatattgatgttaat 76
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 87 tagattcattaacatatatatgaatgtgga 116
||||||||||||||| |||||||||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtgga 44
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 78 atatatgtctagattcattaacatatatatgaatgtgg 115
|||||||||||| ||||||| ||| ||||||||||||
Sbjct: 48 atatatgtctagtttcattagcatcaatatgaatgtgg 11
Score = 44.1 bits (22), Expect = 6e-04
Identities = 61/73 (83%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 36 cattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctagattcat 95
|||| ||||||||||||| ||| |||| |||||| ||| |||||||||||| || ||
Sbjct: 112 catttcccacattcatattgatgctaataaatctag--acatatatatgtctagttttat 55
Query: 96 taacatatatatg 108
|| ||||||||||
Sbjct: 54 tagcatatatatg 42
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatatatatgaatgtgg 115
||||||||||||||| |||| ||| ||||||||||||
Sbjct: 69 atatatgtctagatttattagcatcaatatgaatgtgg 106
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||| | ||||||||||| ||||||||| ||||||
Sbjct: 33 ttctagcatttctcacattcatattgatgttaatgaatctag 74
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatatatatgaatgtg 114
||||||||||||||||| |||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtg 46
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 82 atgtctagattcattaacatatatatgaatgtgg 115
||||||||||||||| |||| ||||||||||||
Sbjct: 44 atgtctagattcattgacatcaatatgaatgtgg 11
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||| ||||||||||||| |||| |||| ||||||
Sbjct: 33 ttctagcatttcccacattcatattgatgtcaatgaatctag 74
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 44.1 bits (22), Expect = 6e-04
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctaggcacacatatatgtctag 89
|||||||||| ||||||||||||| | |||| || |||||| || | |||| | | |||
Sbjct: 130 ttctagcatttcccacattcatatggaggttagtgaatctagacatatatatctatatag 71
Query: 90 attcattaacatatatatgaat 111
||||| |||| | |||||||||
Sbjct: 70 attcactaacctctatatgaat 49
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatatatatgaatgtgg 115
||||||||||||||||| |||| | ||||||||||||
Sbjct: 81 atatatgtctagattcactaacctccatatgaatgtgg 118
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tatatgtctagattcattaaca 100
||||||||||||||||||||||
Sbjct: 63 tatatgtctagattcattaaca 84
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatat 53
|||||||||| |||||| | |||||||||| |||||||||||||
Sbjct: 130 ctccgtttcacaatataagtcattctagcatttcccacattcatat 85
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||| | ||||||||||| ||||||||| ||||||
Sbjct: 33 ttctagcatttctcacattcatattgatgttaatgaatctag 74
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 85 tctagattcattaacatatatatgaatgtg 114
||||||||||||||||| |||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtg 46
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatat 53
|||||||||| |||||| | |||||||||| |||||||||||||
Sbjct: 113 ctccgtttcacaatataagtcattctagcatttcccacattcatat 68
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 30 ttctagcattgcccacattcatatatatgt 59
|||||||||| ||| |||||||||||||||
Sbjct: 33 ttctagcatttcccgcattcatatatatgt 62
Score = 44.1 bits (22), Expect = 6e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 78 atatatgtctagattcattaacatatatatgaat 111
|||||||||||||||||||| ||| ||||||||
Sbjct: 55 atatatgtctagattcattatcatcaatatgaat 88
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatat 53
|||||||||| |||||| | |||||||||| |||||||||||||
Sbjct: 130 ctccgtttcacaatataagtcattctagcatttcccacattcatat 85
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 30 ttctagcattgcccacattcatatatatgttaatgcatctag 71
|||||||||| ||||||||||||| || |||||| ||||||
Sbjct: 87 ttctagcatttcccacattcatattgatattaatgaatctag 46
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatat 53
|||||||||| |||||| | |||||||||| |||||||||||||
Sbjct: 11 ctccgtttcacaatataagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatat 53
|||||||||| |||||| | |||||||||| |||||||||||||
Sbjct: 108 ctccgtttcacaatataagtcattctagcatttcccacattcatat 63
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 79 tatatgtctagattcattaacatatatatgaatgtgga 116
|||||||||||||||| |||||| ||| |||||||||
Sbjct: 62 tatatgtctagattcactaacatccatacgaatgtgga 99
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 8 ctccgtttcaggttataagactttctagcattgcccacattcatat 53
|||||||||| |||||| | |||||||||| |||||||||||||
Sbjct: 11 ctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 85 tctagattcattaacatatatatgaatgtg 114
||||||||||||||||| |||||||||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtg 89
