miRNEST 2.0, an integrative microRNA resource :: BLAST
>46464_miR1132:micropc
Length = 149
Score = 119 bits (60), Expect = 8e-28
Identities = 108/124 (87%)
Strand = Plus / Plus
Query: 52 actttctagcattgtctacattcgtatagatattaatgaatctagacacatatatatgtt 111
|||||||||||||| | |||| ||||||||||||||||||||| || |||||| ||||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 112 tagattcattaacatctatatgaatacgggcaatgctagaaaatcttataatatgaaacg 171
||||||||||||| ||||||| |||| ||| | |||||||||||| || | |||||||||
Sbjct: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
Query: 172 gagg 175
||||
Sbjct: 143 gagg 146
Score = 93.7 bits (47), Expect = 5e-20
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 84 ttaatgaatctagacacatatatatgtttagattcattaacatctatatgaatacgggca 143
|||||||||||| ||||||||||||| |||||||||||| ||||||||||||| | |||
Sbjct: 94 ttaatgaatctaaacacatatatatgcctagattcattaatatctatatgaatatgtgca 35
Query: 144 atgctagaaaatcttataatatgaaacggag 174
|||||||||| | ||| | | ||||||||||
Sbjct: 34 atgctagaaagtattacattgtgaaacggag 4
>45514_miR1132:micropc
Length = 149
Score = 119 bits (60), Expect = 8e-28
Identities = 108/124 (87%)
Strand = Plus / Plus
Query: 52 actttctagcattgtctacattcgtatagatattaatgaatctagacacatatatatgtt 111
|||||||||||||| | |||| ||||||||||||||||||||| || |||||| ||||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 112 tagattcattaacatctatatgaatacgggcaatgctagaaaatcttataatatgaaacg 171
||||||||||||| ||||||| |||| ||| | |||||||||||| || | |||||||||
Sbjct: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
Query: 172 gagg 175
||||
Sbjct: 143 gagg 146
Score = 93.7 bits (47), Expect = 5e-20
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 84 ttaatgaatctagacacatatatatgtttagattcattaacatctatatgaatacgggca 143
|||||||||||| ||||||||||||| |||||||||||| ||||||||||||| | |||
Sbjct: 94 ttaatgaatctaaacacatatatatgcctagattcattaatatctatatgaatatgtgca 35
Query: 144 atgctagaaaatcttataatatgaaacggag 174
|||||||||| | ||| | | ||||||||||
Sbjct: 34 atgctagaaagtattacattgtgaaacggag 4
>45099_miR1132:micropc
Length = 149
Score = 119 bits (60), Expect = 8e-28
Identities = 108/124 (87%)
Strand = Plus / Plus
Query: 52 actttctagcattgtctacattcgtatagatattaatgaatctagacacatatatatgtt 111
|||||||||||||| | |||| ||||||||||||||||||||| || |||||| ||||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 112 tagattcattaacatctatatgaatacgggcaatgctagaaaatcttataatatgaaacg 171
||||||||||||| ||||||| |||| ||| | |||||||||||| || | |||||||||
Sbjct: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
Query: 172 gagg 175
||||
Sbjct: 143 gagg 146
Score = 93.7 bits (47), Expect = 5e-20
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 84 ttaatgaatctagacacatatatatgtttagattcattaacatctatatgaatacgggca 143
|||||||||||| ||||||||||||| |||||||||||| ||||||||||||| | |||
Sbjct: 94 ttaatgaatctaaacacatatatatgcctagattcattaatatctatatgaatatgtgca 35
Query: 144 atgctagaaaatcttataatatgaaacggag 174
|||||||||| | ||| | | ||||||||||
Sbjct: 34 atgctagaaagtattacattgtgaaacggag 4
>44978_miR1130:micropc
Length = 144
Score = 119 bits (60), Expect = 8e-28
Identities = 111/128 (86%)
Strand = Plus / Plus
Query: 48 taagactttctagcattgtctacattcgtatagatattaatgaatctagacacatatata 107
|||||||||||||||||||| ||||| |||| || ||||||||||| |||| |||||
Sbjct: 17 taagactttctagcattgtccacatttatatatatgctaatgaatctaagcacacatata 76
Query: 108 tgtttagattcattaacatctatatgaatacgggcaatgctagaaaatcttataatatga 167
|||||||||| ||| |||||||||||||||| || ||||||||||| ||||| | |||||
Sbjct: 77 tgtttagatttattgacatctatatgaatacaggtaatgctagaaagtcttacattatga 136
Query: 168 aacggagg 175
||| ||||
Sbjct: 137 aacagagg 144
Score = 79.8 bits (40), Expect = 7e-16
Identities = 106/128 (82%)
Strand = Plus / Minus
Query: 48 taagactttctagcattgtctacattcgtatagatattaatgaatctagacacatatata 107
||||||||||||||||| || |||| ||||||| | ||| |||||| ||| |||| |
Sbjct: 128 taagactttctagcattacctgtattcatatagatgtcaataaatctaaacatatatgtg 69
Query: 108 tgtttagattcattaacatctatatgaatacgggcaatgctagaaaatcttataatatga 167
|| |||||||||||| ||| ||||| ||| || |||||||||||| ||||| | |||||
Sbjct: 68 tgcttagattcattagcatatatataaatgtggacaatgctagaaagtcttacattatga 9
Query: 168 aacggagg 175
||||||||
Sbjct: 8 aacggagg 1
>45260_miR819:micropc
Length = 116
Score = 111 bits (56), Expect = 2e-25
Identities = 103/118 (87%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 45 ttataagactttctagcattgtctacattcgtatagatattaatgaatctagacacatat 104
|||||||||||||||| || ||| | ||| ||||||| ||||||||| |||||||||||
Sbjct: 116 ttataagactttctagtatngtccatatttatatagatgttaatgaatatagacacatat 57
Query: 105 atatgtttagattcattaacatctatatgaatacgggcaatgctagaaaatcttataa 162
|| |||||||||||||||||| |||||||||| || ||||||||||| ||||||||
Sbjct: 56 at--gtttagattcattaacatatatatgaatatggataatgctagaaagtcttataa 1
Score = 87.7 bits (44), Expect = 3e-18
Identities = 100/118 (84%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 45 ttataagactttctagcattgtctacattcgtatagatattaatgaatctagacacatat 104
|||||||||||||||||||| || | |||| |||| || ||||||||||| | ||||||
Sbjct: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatct--aaacatat 58
Query: 105 atatgtttagattcattaacatctatatgaatacgggcaatgctagaaaatcttataa 162
|| ||| || |||||||||||||||||| |||| || | || ||||||| ||||||||
Sbjct: 59 atgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
>45075_miR819:micropc
Length = 116
Score = 111 bits (56), Expect = 2e-25
Identities = 103/118 (87%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 45 ttataagactttctagcattgtctacattcgtatagatattaatgaatctagacacatat 104
|||||||||||||||| || ||| | ||| ||||||| ||||||||| |||||||||||
Sbjct: 116 ttataagactttctagtatngtccatatttatatagatgttaatgaatatagacacatat 57
Query: 105 atatgtttagattcattaacatctatatgaatacgggcaatgctagaaaatcttataa 162
|| |||||||||||||||||| |||||||||| || ||||||||||| ||||||||
Sbjct: 56 at--gtttagattcattaacatatatatgaatatggataatgctagaaagtcttataa 1
Score = 87.7 bits (44), Expect = 3e-18
Identities = 100/118 (84%), Gaps = 2/118 (1%)
Strand = Plus / Plus
Query: 45 ttataagactttctagcattgtctacattcgtatagatattaatgaatctagacacatat 104
|||||||||||||||||||| || | |||| |||| || |||||||||||| ||| |||
Sbjct: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaaca--tat 58
Query: 105 atatgtttagattcattaacatctatatgaatacgggcaatgctagaaaatcttataa 162
|| ||| || |||||||||||||||||| |||| || | || ||||||| ||||||||
Sbjct: 59 atgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
>45215_miR1120:micropc
Length = 142
Score = 101 bits (51), Expect = 2e-22
Identities = 105/123 (85%)
Strand = Plus / Plus
Query: 52 actttctagcattgtctacattcgtatagatattaatgaatctagacacatatatatgtt 111
|||||||||||||| | || ||| | || || |||||||||||||| | || ||| ||||
Sbjct: 20 actttctagcattgcccacgttcatttatatgttaatgaatctagatatatttatgtgtt 79
Query: 112 tagattcattaacatctatatgaatacgggcaatgctagaaaatcttataatatgaaacg 171
|| ||||||||||||||||||| ||| | |||||| |||||| ||||||| |||||||||
Sbjct: 80 taaattcattaacatctatatgtatatgagcaatgttagaaattcttatattatgaaacg 139
Query: 172 gag 174
|||
Sbjct: 140 gag 142
Score = 69.9 bits (35), Expect = 7e-13
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 76 tatagatattaatgaatctagacacatatatatgtttagattcattaacatctatatgaa 135
||||||| ||||||||| || ||||||| |||| | ||||||||||||||| || |||||
Sbjct: 99 tatagatgttaatgaatttaaacacataaatatatctagattcattaacatataaatgaa 40
Query: 136 tacgggcaatgctagaaaatcttataatatgaaacggag 174
||||||||||||||| | ||| | ||| ||||||||
Sbjct: 39 cgtgggcaatgctagaaagttttacattataaaacggag 1
>45731_miR446:micropc
Length = 86
Score = 95.6 bits (48), Expect = 1e-20
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 69 acattcgtatagatattaatgaatctagacacatatatatgtttagattcattaacatct 128
|||||| ||| ||| |||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 78 acattcatattgatgttaatgaatctagacacacatatatgtttagattcattaaaatct 19
Query: 129 atatgaat 136
||||||||
Sbjct: 18 atatgaat 11
Score = 83.8 bits (42), Expect = 5e-17
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 61 cattgtctacattcgtatagatattaatgaatctagacacatatatatgtttagattcat 120
||||||| |||||| ||||||| |||||||||||| ||| |||| | ||| |||||||||
Sbjct: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
Query: 121 taacatctatatgaatacgggcaatg 146
||||||| |||||||| ||||||||
Sbjct: 61 taacatcaatatgaatgtgggcaatg 86
>46670_miR809:micropc
Length = 97
Score = 77.8 bits (39), Expect = 3e-15
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 58 tagcattgtctacattcgtatagatattaatgaatctagacacatatatatgtttagatt 117
|||||||||||| |||| |||||| ||||| |||||||||||| |||||||| || |||
Sbjct: 4 tagcattgtctatattca-atagatgttaataaatctagacacacatatatgtctacatt 62
Query: 118 cattaacatctatatgaat 136
||||||||| |||||||||
Sbjct: 63 cattaacatatatatgaat 81
Score = 52.0 bits (26), Expect = 2e-07
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 69 acattcgtatagatattaatgaatctagacacatatatatgtttagattcattaacatct 128
|||||| |||| || ||||||||| |||||| |||| | ||| |||||| ||||||||||
Sbjct: 83 acattcatatatatgttaatgaatgtagacatatatgtgtgtctagatttattaacatct 24
Query: 129 at 130
||
Sbjct: 23 at 22
>44980_miR808:micropc
Length = 97
Score = 77.8 bits (39), Expect = 3e-15
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 58 tagcattgtctacattcgtatagatattaatgaatctagacacatatatatgtttagatt 117
|||||||||||| |||| |||||| ||||| |||||||||||| |||||||| || |||
Sbjct: 4 tagcattgtctatattca-atagatgttaataaatctagacacacatatatgtctacatt 62
Query: 118 cattaacatctatatgaat 136
||||||||| |||||||||
Sbjct: 63 cattaacatatatatgaat 81
Score = 52.0 bits (26), Expect = 2e-07
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 69 acattcgtatagatattaatgaatctagacacatatatatgtttagattcattaacatct 128
|||||| |||| || ||||||||| |||||| |||| | ||| |||||| ||||||||||
Sbjct: 83 acattcatatatatgttaatgaatgtagacatatatgtgtgtctagatttattaacatct 24
Query: 129 at 130
||
Sbjct: 23 at 22
>46801_miR809:micropc
Length = 110
Score = 73.8 bits (37), Expect = 4e-14
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 84 ttaatgaatctagacacatatatatgtttagattcattaacatctatat 132
|||||||||||||| | ||||||||||||||||||||||||||| ||||
Sbjct: 31 ttaatgaatctagatagatatatatgtttagattcattaacatcaatat 79
Score = 50.1 bits (25), Expect = 6e-07
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 84 ttaatgaatctagacacatatatatgtttagattcattaacatctatatgaat 136
|||||||||||| ||| |||||| | | ||||||||||||||| ||||||||
Sbjct: 70 ttaatgaatctaaacatatatatctatctagattcattaacattaatatgaat 18
>46437_miR1436:micropc
Length = 108
Score = 73.8 bits (37), Expect = 4e-14
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 115 attcattaacatctatatgaatacgggcaatgctagaaaatcttataatatgaaacggag 174
||||||||| ||||||||| || ||||||||||||||||||||| | ||||||||||||
Sbjct: 44 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 103
Query: 175 g 175
|
Sbjct: 104 g 104
Score = 50.1 bits (25), Expect = 6e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 48 taagactttctagcattgtctacattcgtatagatattaatgaat 92
||||| |||||||||||| | |||| | |||||||||||||||||
Sbjct: 88 taagattttctagcattgcccacatacatatagatattaatgaat 44
>45687_miR819:micropc
Length = 84
Score = 73.8 bits (37), Expect = 4e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 115 attcattaacatctatatgaatacgggcaatgctagaaaatcttataatatga 167
|||||||||||| ||||||||| ||||||||||||||| |||||||||||||
Sbjct: 32 attcattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 84
Score = 56.0 bits (28), Expect = 1e-08
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 45 ttataagactttctagcattgtctacattcgtatagatattaatgaat 92
||||||||||||||||||||| | |||||| |||| || |||||||||
Sbjct: 79 ttataagactttctagcattgcccacattcatatatatgttaatgaat 32
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 40 tcaggttataagactttctagcatt 64
||||||||||||||||||| |||||
Sbjct: 1 tcaggttataagactttctggcatt 25
>45708_miR809:micropc
Length = 100
Score = 67.9 bits (34), Expect = 3e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 71 attcgtatagatattaatgaatctagacacatatatatgtttagattcattaacatctat 130
|||| ||| |||||||||||||||||| | |||||||||| ||||||||||| |||| ||
Sbjct: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
Query: 131 at 132
||
Sbjct: 78 at 79
Score = 58.0 bits (29), Expect = 3e-09
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 85 taatgaatctagacacatatatatgtttagattcattaacatctatatgaata 137
||||||||||||||| |||||| | | |||||||||||| ||| |||||||||
Sbjct: 69 taatgaatctagacatatatatctatctagattcattaatatcaatatgaata 17
>45522_miR809:micropc
Length = 100
Score = 65.9 bits (33), Expect = 1e-11
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 55 ttctagcattgtctacattcgtatagatattaatgaatctagacacatatatatgtttag 114
|||||||||| || ||||||||| ||| |||||||||||||||| || ||| | | |||
Sbjct: 2 ttctagcattttccacattcgtaatgatgttaatgaatctagacatatgtatctatctag 61
Query: 115 attcattaacatc 127
|||||||||||||
Sbjct: 62 attcattaacatc 74
Score = 61.9 bits (31), Expect = 2e-10
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 69 acattcgtatagatattaatgaatctagacacatatatatgtttagattcattaacatc 127
|||||||| | ||| |||||||||||||| | ||| |||||| ||||||||||||||||
Sbjct: 85 acattcgtgttgatgttaatgaatctagatagatacatatgtctagattcattaacatc 27
>46637_miR446:micropc
Length = 80
Score = 60.0 bits (30), Expect = 7e-10
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 84 ttaatgaatctagacacatatatatgtttagattcattaacatctatatgaata 137
|||||||||||||||| |||||| | |||||||||||||||| |||||||||
Sbjct: 20 ttaatgaatctagacatatatatctagctagattcattaacatcaatatgaata 73
Score = 58.0 bits (29), Expect = 3e-09
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 71 attcgtatagatattaatgaatctagacacatatatatgtttagattcattaacatctat 130
|||| ||| ||| ||||||||||||| | |||||||||| ||||||||||||||| ||
Sbjct: 72 attcatattgatgttaatgaatctagctagatatatatgtctagattcattaacattaat 13
Query: 131 atgaa 135
|||||
Sbjct: 12 atgaa 8
>46775_miR808:micropc
Length = 98
Score = 58.0 bits (29), Expect = 3e-09
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 84 ttaatgaatctagacacatatatatgtttagattcattaacatctatatgaat 136
||||| |||||||| | |||||||| |||||||||||||||||| ||||||||
Sbjct: 31 ttaataaatctagatagatatatat-tttagattcattaacatcaatatgaat 82
>45995_miR446:micropc
Length = 86
Score = 58.0 bits (29), Expect = 3e-09
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 84 ttaatgaatctagacacatatatatgtttagattcattaacatctatatgaat 136
||||| |||||||| | |||||||| |||||||||||||||||| ||||||||
Sbjct: 25 ttaataaatctagatagatatatat-tttagattcattaacatcaatatgaat 76
>45913_miR809:micropc
Length = 100
Score = 58.0 bits (29), Expect = 3e-09
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 84 ttaatgaatctagacacatatatatgtttagattcattaacatctatatgaat 136
||||| |||||||| | |||||||| |||||||||||||||||| ||||||||
Sbjct: 32 ttaataaatctagatagatatatat-tttagattcattaacatcaatatgaat 83
>45717_miR446:micropc
Length = 86
Score = 58.0 bits (29), Expect = 3e-09
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 84 ttaatgaatctagacacatatatatgtttagattcattaacatctatatgaat 136
||||| |||||||| | |||||||| |||||||||||||||||| ||||||||
Sbjct: 25 ttaataaatctagatagatatatat-tttagattcattaacatcaatatgaat 76
>45176_miR446:micropc
Length = 86
Score = 58.0 bits (29), Expect = 3e-09
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 84 ttaatgaatctagacacatatatatgtttagattcattaacatctatatgaat 136
||||| |||||||| | |||||||| |||||||||||||||||| ||||||||
Sbjct: 25 ttaataaatctagatagatatatat-tttagattcattaacatcaatatgaat 76
>46833_miR446:micropc
Length = 81
Score = 56.0 bits (28), Expect = 1e-08
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 69 acattcgtatagatattaatgaatctagacacatatatatgtttagattcattaacatct 128
|||||| ||| ||| ||||||||| |||| | |||| ||||| ||||||||||||||||
Sbjct: 73 acattcatattgatgttaatgaatttagatagatatgtatgtctagattcattaacatca 14
Query: 129 atat 132
||||
Sbjct: 13 atat 10
Score = 50.1 bits (25), Expect = 6e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 84 ttaatgaatctagacacatatatatgtttagattcattaacatctatatgaat 136
|||||||||||||||| | |||| | | || ||||||||||||| ||||||||
Sbjct: 19 ttaatgaatctagacatacatatctatctaaattcattaacatcaatatgaat 71
>46589_miR809:micropc
Length = 100
Score = 56.0 bits (28), Expect = 1e-08
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 84 ttaatgaatctagacacatatatatgtttagattcattaacatctatatgaa 135
||||| |||||||| | |||||||| |||||||||||||| ||| |||||||
Sbjct: 31 ttaataaatctagatagatatatatttttagattcattaatatcgatatgaa 82
Score = 40.1 bits (20), Expect = 6e-04
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 80 gatattaatgaatctagacacatatatatgtttagattcattaacatc 127
|||||||||||||||| | | |||||| | | |||||| |||||||||
Sbjct: 74 gatattaatgaatctaaaaatatatatctatctagatttattaacatc 27
