miRNEST 2.0, an integrative microRNA resource :: BLAST
>49177_osa-miR1880:pmrd
Length = 129
Score = 256 bits (129), Expect = 3e-69
Identities = 129/129 (100%)
Strand = Plus / Plus
Query: 1 gttccgcttgtgaaaatcgatttttccaagcgggccacttaagcattccgcctgtaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttccgcttgtgaaaatcgatttttccaagcgggccacttaagcattccgcctgtaaaat 60
Query: 61 taaaggtattttcgcagccggatcgcttaagtggtccgcctggataaatcgattttcgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaaggtattttcgcagccggatcgcttaagtggtccgcctggataaatcgattttcgta 120
Query: 121 ggcggatga 129
|||||||||
Sbjct: 121 ggcggatga 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 85 gcttaagtggtccgcctggataaatcgattttc 117
|||||||||| |||| |||| ||||||||||||
Sbjct: 44 gcttaagtggcccgcttggaaaaatcgattttc 12
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 12 gaaaatcgatttttccaagcgggccacttaagc 44
|||||||||||| |||| |||| ||||||||||
Sbjct: 117 gaaaatcgatttatccaggcggaccacttaagc 85
>50520_osa-miRf11305-akr:pmrd
Length = 89
Score = 60.0 bits (30), Expect = 4e-10
Identities = 76/90 (84%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 20 atttttccaagcgggccacttaagcattccgcctgtaaaattaaaggtattttcgcagcc 79
||||||||| |||| ||| ||||| |||||||| ||||| |||||||||||||||| |
Sbjct: 1 atttttccaggcggaccagttaagaggtccgcctgcaaaat-aaaggtattttcgcaggc 59
Query: 80 ggatcgcttaagtggtccgcctggataaat 109
|| | |||||||||||| |||||| ||||
Sbjct: 60 agacctcttaagtggtccacctggaaaaat 89
>51283_osa-miRf12068-akr:pmrd
Length = 158
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 13 aaaatcgatttttccaagcgggccacttaagca 45
|||||||||||||||| || ||||||||||||
Sbjct: 112 aaaatcgatttttccatacgagccacttaagca 144
>49300_osa-miRf10085-akr:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 80 ggatcgcttaagtggtccgcctgga 104
||||| |||||||||||||||||||
Sbjct: 60 ggatctcttaagtggtccgcctgga 84
>50910_osa-miRf11695-akr:pmrd
Length = 75
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 83 tcgcttaagtggtccgcctg 102
||||||||||||||||||||
Sbjct: 31 tcgcttaagtggtccgcctg 50
>50909_osa-miRf11694-akr:pmrd
Length = 75
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 83 tcgcttaagtggtccgcctg 102
||||||||||||||||||||
Sbjct: 31 tcgcttaagtggtccgcctg 50
>49256_osa-miRf10041-akr:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 61 taaaggtattttcgcagccggatcgcttaagtggtccgcctgga 104
|||||||||||| || |||| | |||||||||||||||||||
Sbjct: 48 taaaggtatttttttaggcggacctcttaagtggtccgcctgga 5
