miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01911;MIR2118;AL606706.3/88345-88174 39947:Oryza sativa Japonica
Group
Length = 172
Score = 341 bits (172), Expect = 2e-93
Identities = 172/172 (100%)
Strand = Plus / Plus
Query: 5 gcgaggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgaggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaaa 60
Query: 65 atgagctctcagtgttcacttctggaagtggaggtggatatttgtctcagtatttttccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgagctctcagtgttcacttctggaagtggaggtggatatttgtctcagtatttttccc 120
Query: 125 gatgcctcccattcctatcgttcttaggtgctccttcctcttcctttcagct 176
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgcctcccattcctatcgttcttaggtgctccttcctcttcctttcagct 172
>RF01911;MIR2118;AP008217.1/7727087-7726916 39947:Oryza sativa
Japonica Group
Length = 172
Score = 216 bits (109), Expect = 8e-56
Identities = 157/171 (91%), Gaps = 4/171 (2%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaaaatg 67
||||||||||||||||||||| |||||||||||||||| ||||||||| | |||||||||
Sbjct: 4 aggaagaggaagaaagaggtaatctaagagcagtgggagtgggaacatggtggaaaaatg 63
Query: 68 agctctcagtgttcacttctggaagtggaggtgg--atatttgtctcagtatttttcccg 125
|| | ||||| ||||||||| ||| ||||||||| |||||||||||| |||||| |||
Sbjct: 64 agatatcagttttcacttctagaattggaggtggatatatttgtctcactatttt--ccg 121
Query: 126 atgcctcccattcctatcgttcttaggtgctccttcctcttcctttcagct 176
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atgcctcccattcctatcgttcttaggtgctccttcctcttcctttcagct 172
>RF01911;MIR2118;ABXC01004283.1/14206-14032 4558:Sorghum bicolor
(sorghum)
Length = 175
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 120 ttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcctttc 172
|||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 119 ttcctgatgcctcccattcctatggttcttaggtgctccttcctcttcctttc 171
>RF01911;MIR2118;ABXC01004282.1/25056-24902 4558:Sorghum bicolor
(sorghum)
Length = 155
Score = 87.7 bits (44), Expect = 5e-17
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 104 atttgtctcagtatttttcccgatgcctcccattcctatcgttcttaggtgctccttcct 163
|||||||||||| |||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct: 84 atttgtctcagtgtttt-cctgatgcctcccattcctacagttcttaggtgctccttcct 142
Query: 164 cttccttt 171
||||||||
Sbjct: 143 cttccttt 150
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaa 63
|||||||||||||||||| |||||||| |||||||||||||||| |||||||
Sbjct: 4 aggaagaggaagaaagagaatacctaagagcggtgggaatgggaacatggaggaaa 59
>RF01911;MIR2118;AAAA02013919.1/7268-7439 39946:Oryza sativa Indica
Group
Length = 172
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 117 tttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcctttcagct 176
|||||||||||||||||||||||||||||||||| | || |||||||||||||||||||
Sbjct: 113 tttttcccgatgcctcccattcctatcgttcttaagcacttcttcctcttcctttcagct 172
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaa 63
|||||||||||||||||| || ||||||||||||||||||||||||| |||||||
Sbjct: 4 aggaagaggaagaaagagagagcctaagagcagtgggaatgggaacatggaggaaa 59
>RF01911;MIR2118;AP008210.1/21663107-21662944 39947:Oryza sativa
Japonica Group
Length = 164
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcctttcagct 176
|||||| |||||||||||||||||| |||||||||||||| |||||||| |||||||||
Sbjct: 106 ttttcctgatgcctcccattcctatagttcttaggtgctcgttcctcttactttcagct 164
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 tctaagagcagtgggaatgggaacat 55
|||||||||||| |||||||||||||
Sbjct: 26 tctaagagcagtaggaatgggaacat 51
>RF01911;MIR2118;ABXC01004282.1/27623-27465 4558:Sorghum bicolor
(sorghum)
Length = 159
Score = 83.8 bits (42), Expect = 8e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 119 tttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcc 168
|||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 102 tttcccaatgcctcccattcctatcgttcttaggttctccttcctcttcc 151
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaa 63
|||||||||||||||||| ||||||||||||| ||||||||||| ||| |||||||
Sbjct: 4 aggaagaggaagaaagagatagtctaagagcaatgggaatgggagcatggaggaaa 59
>RF01911;MIR2118;AP008210.1/21658799-21658648 39947:Oryza sativa
Japonica Group
Length = 152
Score = 83.8 bits (42), Expect = 8e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 126 atgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 102 atgcctcccattcctattgttcttaggtgctccttcctcttccttt 147
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/55 (89%), Gaps = 2/55 (3%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaa 63
|||||||||||| ||||| |||||||||| || ||||||||||||| |||||||
Sbjct: 5 ggaagaggaagacagagg--gtctaagagctgtaggaatgggaacatggaggaaa 57
>RF01911;MIR2118;ABXC01004282.1/23045-22871 4558:Sorghum bicolor
(sorghum)
Length = 175
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaa 63
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 4 aggaagaggaagaaagagtctgtctaagagcagtgggaatgggaacatggaggaaa 59
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 127 tgcctcccattcctatcgttcttaggtgctccttcctcttcc 168
|||||||||||||||| |||||||||||||||||||||||||
Sbjct: 126 tgcctcccattcctattgttcttaggtgctccttcctcttcc 167
>RF01911;MIR2118;AACV01009812.1/23383-23542 39947:Oryza sativa
Japonica Group
Length = 160
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcctt 170
|||||| |||||||||||||||||| |||||| |||||||||||| |||||||
Sbjct: 102 ttttcctgatgcctcccattcctattgttcttgggtgctccttccccttcctt 154
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 36 agcagtgggaatgggaacatagaggaaa 63
|||||||||||||||||||| |||||||
Sbjct: 32 agcagtgggaatgggaacatggaggaaa 59
>RF01911;MIR2118;ABXC01004286.1/22135-21991 4558:Sorghum bicolor
(sorghum)
Length = 145
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 120 ttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
|||| |||||||||||| ||||| ||||||||||||||||||||||| ||||
Sbjct: 89 ttcctgatgcctcccatgcctattgttcttaggtgctccttcctcttgcttt 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 44/48 (91%), Gaps = 3/48 (6%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaa-gaggtagtctaagagcagtgggaatgggaacat 55
|||||||||||||| |||| |||||||||||||||| ||||||||||
Sbjct: 5 ggaagaggaagaaaagagg--gtctaagagcagtgggcatgggaacat 50
>RF01911;MIR2118;ABXC01004282.1/27391-27234 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 119 tttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcct 169
|||||| ||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 101 tttcccaatgcctcccatgcctattgttcttaggtgttccttcctcttcct 151
>RF01911;MIR2118;AAAA02013919.1/20837-21004 39946:Oryza sativa
Indica Group
Length = 168
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcctttcagct 176
|||||||||||||||| ||||||| | |||||||| ||||||||||||||||| ||||
Sbjct: 110 ttttcccgatgcctcctattcctaccaatcttaggtactccttcctcttccttttagct 168
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaa 63
||||||||||||||||| | |||||||| ||||||| ||||||| |||||||
Sbjct: 5 ggaagaggaagaaagagagactctaagagtgatgggaataggaacatggaggaaa 59
>RF01911;MIR2118;ABXC01004282.1/24832-24688 4558:Sorghum bicolor
(sorghum)
Length = 145
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
|||||| | |||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 87 ttttcctgttgcctctcattcctacggttcttaggtgctccttcctcttccttt 140
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacat 55
|||||| ||||||||||| |||||||||||||||||||| ||||||
Sbjct: 4 aggaagtggaagaaagagaatgtctaagagcagtgggaatgagaacat 51
>RF01911;MIR2118;AL606706.3/95450-95277 39947:Oryza sativa Japonica
Group
Length = 174
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 127 tgcctcccattcctatcgttcttaggtgctccttcctcttcctttcagct 176
|||||||||||||||| || ||||| | ||||||||||||||||||||||
Sbjct: 125 tgcctcccattcctattgtccttagatactccttcctcttcctttcagct 174
>RF01911;MIR2118;AL606706.3/90746-90578 39947:Oryza sativa Japonica
Group
Length = 169
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
|||||| |||||||||||| ||||| ||||| || |||||||||||||||||||
Sbjct: 111 ttttcctgatgcctcccatgcctattgttctcagatgctccttcctcttccttt 164
Score = 44.1 bits (22), Expect = 7e-04
Identities = 50/57 (87%), Gaps = 3/57 (5%)
Strand = Plus / Plus
Query: 8 aggaagaggaag-aaagaggtagtctaagagcagtgggaatgggaacatagaggaaa 63
|||||||||||| ||||||| |||| ||||| ||||| |||||||||| |||||||
Sbjct: 4 aggaagaggaagaaaagagg--gtctgagagcggtgggcatgggaacatggaggaaa 58
>RF01911;MIR2118;AL606706.3/95698-95530 39947:Oryza sativa Japonica
Group
Length = 169
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
|||||| |||||||| ||||||||| ||||| |||||||||||||||||||||
Sbjct: 111 ttttcctgatgcctctcattcctatggttctagggtgctccttcctcttccttt 164
>RF01911;MIR2118;ABXC01004282.1/24617-24453 4558:Sorghum bicolor
(sorghum)
Length = 165
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 119 tttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
|||||||||||||||||| ||||| |||||||| | |||||||| ||||||||
Sbjct: 108 tttcccgatgcctcccatgcctattgttcttagttactccttccccttccttt 160
Score = 56.0 bits (28), Expect = 2e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaa 63
||||||||||||||| || |||||||||||||||| |||||||||| |||||||
Sbjct: 4 aggaagaggaagaaacgagt-gtctaagagcagtgggcatgggaacatggaggaaa 58
>RF01911;MIR2118;ABXC01004286.1/22374-22204 4558:Sorghum bicolor
(sorghum)
Length = 171
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 119 tttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
|||||| ||||||||||||||||| ||||||| ||||||| |||| |||||||
Sbjct: 114 tttcccaatgcctcccattcctattgttcttaagtgctccatccttttccttt 166
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 31 ctaagagcagtgggaatgggaacatagaggaaa 63
||||||||||||||||||||||||| |||||||
Sbjct: 27 ctaagagcagtgggaatgggaacatggaggaaa 59
>RF01911;MIR2118;AP008210.1/21651167-21650991 39947:Oryza sativa
Japonica Group
Length = 177
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcct 169
|||||||||||||| ||| |||||||||||| |||||||||||||| ||||
Sbjct: 119 ttttcccgatgcctgtcatgcctatcgttcttcggtgctccttcctcctcct 170
>RF01911;MIR2118;ABXC01004286.1/17945-17773 4558:Sorghum bicolor
(sorghum)
Length = 173
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaa 63
||||||| ||||||||| | ||||||||||||||||||||||||| |||||||
Sbjct: 5 ggaagagcaagaaagagcgggcctaagagcagtgggaatgggaacatggaggaaa 59
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 127 tgcctcccattcctatcgttcttaggtgctccttcctcttcct 169
|||||||||||||||||||||||| | ||||||| |||||||
Sbjct: 124 tgcctcccattcctatcgttcttaagcgctccttgttcttcct 166
>RF01911;MIR2118;AAAA02013919.1/23719-23885 39946:Oryza sativa
Indica Group
Length = 167
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcc 168
|||||||||||||||||| ||||| || ||||||| ||||||||||||||
Sbjct: 109 ttttcccgatgcctcccaagcctattgtccttaggtactccttcctcttcc 159
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 31 ctaagagcagtgggaatgggaacatagaggaaa 63
|||||||||||||| |||||||||| |||||||
Sbjct: 26 ctaagagcagtgggcatgggaacatggaggaaa 58
>RF01911;MIR2118;AC135459.3/87322-87489 39947:Oryza sativa Japonica
Group
Length = 168
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 116 atttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcct 169
||||||||| ||||||||||| |||| |||||||||| |||||||| ||||||
Sbjct: 108 atttttcccaatgcctcccatgcctacagttcttaggtactccttccccttcct 161
Score = 56.0 bits (28), Expect = 2e-07
Identities = 50/55 (90%), Gaps = 3/55 (5%)
Strand = Plus / Plus
Query: 9 ggaagaggaagaaa-gaggtagtctaagagcagtgggaatgggaacatagaggaa 62
|||||||||||||| |||| |||||||||||||||| |||||||||| ||||||
Sbjct: 5 ggaagaggaagaaaagagg--gtctaagagcagtgggcatgggaacatggaggaa 57
>RF01911;MIR2118;AAAA02013919.1/25848-26037 39946:Oryza sativa
Indica Group
Length = 190
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
||||| |||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 132 ttttctcgatgcctcccattcctatcgttcttggaacttccttcctcttccttt 185
>RF01911;MIR2118;ABXC01004283.1/17551-17393 4558:Sorghum bicolor
(sorghum)
Length = 159
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 123 ccgatgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
|||||||||||||||||||| |||||| | |||||||||||||||||
Sbjct: 106 ccgatgcctcccattcctattattcttaagcactccttcctcttccttt 154
>RF01911;MIR2118;ABXC01004282.1/30150-29982 4558:Sorghum bicolor
(sorghum)
Length = 169
Score = 56.0 bits (28), Expect = 2e-07
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggt-gctccttcctcttcctttcagct 176
|||||||||||||||| |||||| ||| |||||||| |||||||| ||| |||||||||
Sbjct: 110 ttttcccgatgcctcctattcctgtcgatcttaggtaactccttcccctttctttcagct 169
>RF01911;MIR2118;AP008210.1/21667363-21667201 39947:Oryza sativa
Japonica Group
Length = 163
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcctttc 172
|||||| ||||||||||||||||| |||||||||| || |||||||| |||||
Sbjct: 105 ttttcctgatgcctcccattcctacagttcttaggtccttgttcctcttactttc 159
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 30 tctaagagcagtgggaatgggaacat 55
|||||||||||| |||||||||||||
Sbjct: 25 tctaagagcagtaggaatgggaacat 50
>RF01911;MIR2118;AACV01009812.1/12630-12796 39947:Oryza sativa
Japonica Group
Length = 167
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 125 gatgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
||||||||||| ||||| |||| | |||||||||||||||||||||
Sbjct: 116 gatgcctcccaagcctattgttccttggtgctccttcctcttccttt 162
>RF01911;MIR2118;ABXC01004283.1/19912-19741 4558:Sorghum bicolor
(sorghum)
Length = 172
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 34 agagcagtgggaatgggaacatagaggaaa 63
|||||||||||||||||||||| |||||||
Sbjct: 30 agagcagtgggaatgggaacatggaggaaa 59
>RF01911;MIR2118;AACV01009812.1/26461-26632 39947:Oryza sativa
Japonica Group
Length = 172
Score = 52.0 bits (26), Expect = 3e-06
Identities = 51/58 (87%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaaaa 65
||||||||||||||| || ||||||||||||| || |||||||||| |||||||||
Sbjct: 4 aggaagaggaagaaa-agagagtctaagagcagcaggcatgggaacatggaggaaaaa 60
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 117 tttttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttcct 169
|||||||| ||||||||||| |||| ||||||||| |||||||| ||||||
Sbjct: 113 tttttcccaatgcctcccatgcctacagttcttaggcactccttccacttcct 165
>RF01911;MIR2118;AACV01009812.1/17181-17352 39947:Oryza sativa
Japonica Group
Length = 172
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 126 atgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
|||| |||||||||||| ||| |||| | |||||||||||||||||
Sbjct: 122 atgcttcccattcctattgttgttagatactccttcctcttccttt 167
>RF01911;MIR2118;ABXC01004283.1/13954-13790 4558:Sorghum bicolor
(sorghum)
Length = 165
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 119 tttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
|||||||||||||| ||||||||| |||||| | ||||||||||||||||
Sbjct: 108 tttcccgatgcctctcattcctatagttcttgcgccttccttcctcttccttt 160
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 8 aggaagaggaagaaagaggtagtctaagagcagtgggaatgggaacatagaggaaa 63
||||||||||||||| || || ||||||||||||||||| ||| || |||||||
Sbjct: 4 aggaagaggaagaaacagagggtataagagcagtgggaatgagaatattgaggaaa 59
>RF01911;MIR2118;ABXC01004282.1/22775-22606 4558:Sorghum bicolor
(sorghum)
Length = 170
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 119 tttcccgatgcctcccattcctatcgttcttaggtgctccttcctcttccttt 171
|||||| ||||||||||| ||||| ||| |||| | |||||||| ||||||||
Sbjct: 113 tttcccaatgcctcccatgcctattgttgttagtttctccttccccttccttt 165
>RF01911;MIR2118;AL606706.3/87890-87721 39947:Oryza sativa Japonica
Group
Length = 170
Score = 46.1 bits (23), Expect = 2e-04
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 118 ttttcccgatgcctcccattcctatcgttcttaggtgctcctt-cctcttccttt 171
||||||| || |||||||| ||||| ||||| ||||| ||||| |||||||||||
Sbjct: 111 ttttcccaatacctcccatgcctattgttctcaggtgttcctttcctcttccttt 165
