miRNEST 2.0, an integrative microRNA resource :: BLAST
>49004_osa-miR442:pmrd
Length = 233
Score = 163 bits (82), Expect = 9e-41
Identities = 198/239 (82%), Gaps = 17/239 (7%)
Strand = Plus / Plus
Query: 27 atggagtattaaatataat----aaaaataactaattacacagattgtgtgtaaattacg 82
|||||||||||||||||| ||||||||||||||| |||||| ||||||||| ||
Sbjct: 8 atggagtattaaatataaatgaaaaaaataactaattatacagatgacgtgtaaattgcg 67
Query: 83 agatgaatcttttaagcctaattgcttcttgatttgacaatgtggtgctacaatgtggtg 142
||| |||||||||||||||||||||| | |||| |||||| |||||||
Sbjct: 68 agacgaatcttttaagcctaattgctccatgatctgacaa-------------tgtggtg 114
Query: 143 ctacagtaaacatatgctaacgagggattaattaggcttaataaatttgtctcgcggttt 202
||||||||||||| |||||| || ||||||||||||||||||||||| ||||||| ||||
Sbjct: 115 ctacagtaaacatttgctaatgacggattaattaggcttaataaattcgtctcgcagttt 174
Query: 203 acaagtggaatctgtaatttgttttattactagtctatgtttaatactttaaatgtgtg 261
||| ||| ||||||||||||||| ||| ||||||| ||| ||||||| |||||||||
Sbjct: 175 acagacggattctgtaatttgttttgttattagtctacgttaaatacttcaaatgtgtg 233
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 107 bits (54), Expect = 5e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 132 acaatgtggtgctacagtaaacatatgctaacgagggattaattaggcttaataaatttg 191
|||||||||||||| ||||||||| |||||| || ||||||||||||||||||||||| |
Sbjct: 59 acaatgtggtgctaaagtaaacatttgctaatgatggattaattaggcttaataaattcg 118
Query: 192 tctcgcggtttaca 205
||||||||||||||
Sbjct: 119 tctcgcggtttaca 132
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 60.0 bits (30), Expect = 1e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 132 acaatgtggtgctacagtaaacatatgctaacgagggattaattaggcttaataaatt 189
||||||| ||| |||| ||||||| |||||| || ||||||||||||||| |||||||
Sbjct: 58 acaatgttgtggtacaataaacatttgctaatgacggattaattaggcttcataaatt 115
>49474_osa-miRf10259-akr:pmrd
Length = 81
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 243 ttaatactttaaatgtgtgtccgtatat 270
||||||||||||||||||||||||||||
Sbjct: 81 ttaatactttaaatgtgtgtccgtatat 54
Score = 50.1 bits (25), Expect = 9e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 243 ttaatactttaaatgtgtgtccgtatattcgat 275
||||||||| |||||||||||||||||| ||||
Sbjct: 1 ttaatacttcaaatgtgtgtccgtatatccgat 33
>49408_osa-miRf10193-akr:pmrd
Length = 137
Score = 54.0 bits (27), Expect = 6e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 aatgtttggacacatgcatggagtatt 36
|||||||||||||||||||||||||||
Sbjct: 111 aatgtttggacacatgcatggagtatt 137
>49008_osa-miR445a:pmrd
Length = 268
Score = 52.0 bits (26), Expect = 2e-07
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 132 acaatgtggtgctacagtaaacatatgctaacgagggattaattaggcttaataaatttg 191
|||||||| ||||||||||||| | | ||| | ||||||||||||||||| ||||| |
Sbjct: 147 acaatgtgatgctacagtaaacttttcataattatggattaattaggcttaaaaaattcg 88
Query: 192 tctcgc 197
||||||
Sbjct: 87 tctcgc 82
Score = 44.1 bits (22), Expect = 6e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 81 cgagatgaatcttttaagcctaattgcttcttgatttgacaatgtggtgctaca 134
||||| ||||||||| || |||||| | | ||||||||||||||| |||||||
Sbjct: 185 cgagacgaatcttttgagtctaattacaccatgatttgacaatgtgatgctaca 132
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 218 aatttgttttattactagtctatgtttaatact 250
|||| ||||| ||| ||||||||||||||||||
Sbjct: 61 aattagtttttttattagtctatgtttaatact 29
>49011_osa-miR445d:pmrd
Length = 312
Score = 50.1 bits (25), Expect = 9e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 135 atgtggtgctacagtaaacatatgctaacgagggattaattaggcttaataaatttgtct 194
||||| ||||||| ||||||| || ||| | ||||||||||||||||| || |||||||
Sbjct: 145 atgtgatgctacactaaacatgtgttaattatggattaattaggcttaaaaattttgtct 204
Query: 195 c 195
|
Sbjct: 205 c 205
Score = 40.1 bits (20), Expect = 9e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 233 tagtctatgtttaatacttt 252
||||||||||||||||||||
Sbjct: 67 tagtctatgtttaatacttt 48
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 48.1 bits (24), Expect = 4e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 167 ggattaattaggcttaataaatttgtctcgcg 198
|||||||||||||| |||| ||||||||||||
Sbjct: 41 ggattaattaggctcaatagatttgtctcgcg 10
Score = 44.1 bits (22), Expect = 6e-05
Identities = 29/30 (96%), Gaps = 1/30 (3%)
Strand = Plus / Plus
Query: 169 attaattaggcttaataaatttgtctcgcg 198
||||||||||||||| ||||||||||||||
Sbjct: 98 attaattaggcttaa-aaatttgtctcgcg 126
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 48.1 bits (24), Expect = 4e-06
Identities = 56/66 (84%), Gaps = 3/66 (4%)
Strand = Plus / Minus
Query: 140 gtgctacagtaa---acatatgctaacgagggattaattaggcttaataaatttgtctcg 196
|||||||||||| |||| |||||| || |||||||||||||| || | ||| ||||||
Sbjct: 68 gtgctacagtaatccacatgtgctaatgacggattaattaggctcaaaagattcgtctcg 9
Query: 197 cggttt 202
||||||
Sbjct: 8 cggttt 3
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 81 cgagatgaatcttttaagcctaatt 105
||||| |||||||||||||||||||
Sbjct: 115 cgagacgaatcttttaagcctaatt 91
>49409_osa-miRf10194-akr:pmrd
Length = 129
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 aatgtttggacacatgcatggag 32
|||||||||||||||||||||||
Sbjct: 23 aatgtttggacacatgcatggag 1
>49015_osa-miR445h:pmrd
Length = 277
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 167 ggattaattaggcttaataaatttgtctcgc 197
||||||||||||||||| ||||| |||||||
Sbjct: 125 ggattaattaggcttaaaaaattcgtctcgc 95
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 218 aatttgttttattactagtctatgtttaatact 250
|||| ||||| ||| ||||||||||||||||||
Sbjct: 74 aattagtttttttattagtctatgtttaatact 42
>49014_osa-miR445g:pmrd
Length = 275
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 167 ggattaattaggcttaataaatttgtctcgc 197
||||||||||||||||| ||||| |||||||
Sbjct: 124 ggattaattaggcttaaaaaattcgtctcgc 94
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 218 aatttgttttattactagtctatgtttaatact 250
|||| ||||| ||| ||||||||||||||||||
Sbjct: 73 aattagtttttttattagtctatgtttaatact 41
>49012_osa-miR445e:pmrd
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 167 ggattaattaggcttaataaatttgtctcgc 197
||||||||||||||||| ||||| |||||||
Sbjct: 119 ggattaattaggcttaaaaaattcgtctcgc 89
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 218 aatttgttttattactagtctatgtttaatact 250
|||| ||||| ||| ||||||||||||||||||
Sbjct: 68 aattagtttttttattagtctatgtttaatact 36
>49010_osa-miR445c:pmrd
Length = 260
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 167 ggattaattaggcttaataaatttgtctcgc 197
||||||||||||||||| ||||| |||||||
Sbjct: 117 ggattaattaggcttaaaaaattcgtctcgc 87
Score = 44.1 bits (22), Expect = 6e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 80 acgagatgaatcttttaagcctaatt 105
|||||| |||||||||||||||||||
Sbjct: 174 acgagacgaatcttttaagcctaatt 149
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 218 aatttgttttattactagtctatgtttaatact 250
|||| ||||| ||| ||||||||||||||||||
Sbjct: 66 aattagtttttttattagtctatgtttaatact 34
>49016_osa-miR445i:pmrd
Length = 244
Score = 44.1 bits (22), Expect = 6e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 223 gttttattactagtctatgtttaatactttaaat 256
||||||| | |||| |||||||||||||||||||
Sbjct: 174 gttttataattagtgtatgtttaatactttaaat 207
>49013_osa-miR445f:pmrd
Length = 305
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 218 aatttgttttattactagtctatgtttaatact 250
|||| ||||| ||| ||||||||||||||||||
Sbjct: 89 aattagtttttttattagtctatgtttaatact 57
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 9e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 167 ggattaattaggcttaataaatttgtctcgcggttt 202
|||||||||||||| || | ||| ||||||||||||
Sbjct: 87 ggattaattaggctcaaaagattcgtctcgcggttt 122
>49009_osa-miR445b:pmrd
Length = 264
Score = 40.1 bits (20), Expect = 9e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 233 tagtctatgtttaatactttaaat 256
|||||||||||||||||| |||||
Sbjct: 53 tagtctatgtttaatactctaaat 30
