miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>49726_osa-miRf10511-akr:pmrd
          Length = 128

 Score =  254 bits (128), Expect = 4e-68
 Identities = 128/128 (100%)
 Strand = Plus / Plus

                                                                       
Query: 99  gtagagagtctatagataaccattgcaggtgcccttatgcttccgttgtttggaaatcaa 158
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtagagagtctatagataaccattgcaggtgcccttatgcttccgttgtttggaaatcaa 60

                                                                       
Query: 159 ggtgactacgtcattcgtttccatcgcttgattagggcacccacaatggttatctgtagg 218
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggtgactacgtcattcgtttccatcgcttgattagggcacccacaatggttatctgtagg 120

                   
Query: 219 ctctctac 226
           ||||||||
Sbjct: 121 ctctctac 128




>49727_osa-miRf10512-akr:pmrd
          Length = 120

 Score =  238 bits (120), Expect = 2e-63
 Identities = 120/120 (100%)
 Strand = Plus / Plus

                                                                       
Query: 103 agagtctatagataaccattgcaggtgcccttatgcttccgttgtttggaaatcaaggtg 162
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agagtctatagataaccattgcaggtgcccttatgcttccgttgtttggaaatcaaggtg 60

                                                                       
Query: 163 actacgtcattcgtttccatcgcttgattagggcacccacaatggttatctgtaggctct 222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  actacgtcattcgtttccatcgcttgattagggcacccacaatggttatctgtaggctct 120




>49728_osa-miRf10513-akr:pmrd
          Length = 118

 Score =  234 bits (118), Expect = 3e-62
 Identities = 118/118 (100%)
 Strand = Plus / Plus

                                                                       
Query: 104 gagtctatagataaccattgcaggtgcccttatgcttccgttgtttggaaatcaaggtga 163
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gagtctatagataaccattgcaggtgcccttatgcttccgttgtttggaaatcaaggtga 60

                                                                     
Query: 164 ctacgtcattcgtttccatcgcttgattagggcacccacaatggttatctgtaggctc 221
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctacgtcattcgtttccatcgcttgattagggcacccacaatggttatctgtaggctc 118