miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>50234_osa-miRf11019-akr:pmrd
          Length = 99

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 122 tttttgggacggagggagtactg 144
           |||||||||||||||||||||||
Sbjct: 25  tttttgggacggagggagtactg 3



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 31 tactccctccgtcccaaaaa 50
          ||||||||||||||||||||
Sbjct: 6  tactccctccgtcccaaaaa 25




>50485_osa-miRf11270-akr:pmrd
          Length = 82

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 122 tttttgggacggagggagtact 143
           ||||||||||||||||||||||
Sbjct: 57  tttttgggacggagggagtact 78



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 31 tactccctccgtcccaaaaa 50
          ||||||||||||||||||||
Sbjct: 76 tactccctccgtcccaaaaa 57




>54697_tae-miR1122:pmrd
          Length = 295

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 atactccctccgtcccaaaaa 50
          |||||||||||||||||||||
Sbjct: 24 atactccctccgtcccaaaaa 44



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 122 tttttgggacggagggagta 141
           ||||||||||||||||||||
Sbjct: 44  tttttgggacggagggagta 25



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  atactccctccgtcccaaaa 49
           ||||||||||||||||||||
Sbjct: 152 atactccctccgtcccaaaa 133




>50953_osa-miRf11738-akr:pmrd
          Length = 162

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 atactccctccgtcccaaaaa 50
          |||||||||||||||||||||
Sbjct: 9  atactccctccgtcccaaaaa 29



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 122 tttttgggacggagggagta 141
           ||||||||||||||||||||
Sbjct: 29  tttttgggacggagggagta 10




>49637_osa-miRf10422-akr:pmrd
          Length = 105

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 122 tttttgggacggagggagtac 142
           |||||||||||||||||||||
Sbjct: 77  tttttgggacggagggagtac 97



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 31 tactccctccgtcccaaaaa 50
          ||||||||||||||||||||
Sbjct: 96 tactccctccgtcccaaaaa 77




>49636_osa-miRf10421-akr:pmrd
          Length = 105

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 122 tttttgggacggagggagtac 142
           |||||||||||||||||||||
Sbjct: 77  tttttgggacggagggagtac 97



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 31 tactccctccgtcccaaaaa 50
          ||||||||||||||||||||
Sbjct: 96 tactccctccgtcccaaaaa 77




>49433_osa-miRf10218-akr:pmrd
          Length = 93

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 atactccctccgtcccaaaaa 50
          |||||||||||||||||||||
Sbjct: 10 atactccctccgtcccaaaaa 30



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 30 atactccctccgtcccaaaaa 50
          |||||||||||||||||||||
Sbjct: 84 atactccctccgtcccaaaaa 64



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 122 tttttgggacggagggagta 141
           ||||||||||||||||||||
Sbjct: 30  tttttgggacggagggagta 11



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 122 tttttgggacggagggagta 141
           ||||||||||||||||||||
Sbjct: 64  tttttgggacggagggagta 83




>49314_osa-miRf10099-akr:pmrd
          Length = 144

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 123 ttttgggacggagggagtact 143
           |||||||||||||||||||||
Sbjct: 32  ttttgggacggagggagtact 12




>49156_osa-miR1862e:pmrd
          Length = 93

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 29 gatactccctccgtcccaaaa 49
          |||||||||||||||||||||
Sbjct: 93 gatactccctccgtcccaaaa 73




>49155_osa-miR1862d:pmrd
          Length = 150

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 29  gatactccctccgtcccaaaa 49
           |||||||||||||||||||||
Sbjct: 124 gatactccctccgtcccaaaa 104




>54757_tmo-miR1122:pmrd
          Length = 180

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 123 ttttgggacggagggagtac 142
           ||||||||||||||||||||
Sbjct: 44  ttttgggacggagggagtac 25




>50434_osa-miRf11219-akr:pmrd
          Length = 123

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 122 tttttgggacggagggagta 141
           ||||||||||||||||||||
Sbjct: 26  tttttgggacggagggagta 7



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 31 tactccctccgtcccaaaaa 50
          ||||||||||||||||||||
Sbjct: 7  tactccctccgtcccaaaaa 26




>50433_osa-miRf11218-akr:pmrd
          Length = 123

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  tactccctccgtcccaaaaa 50
           ||||||||||||||||||||
Sbjct: 117 tactccctccgtcccaaaaa 98



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 122 tttttgggacggagggagta 141
           ||||||||||||||||||||
Sbjct: 98  tttttgggacggagggagta 117




>49958_osa-miRf10743-akr:pmrd
          Length = 122

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 30 atactccctccgtcccaaaa 49
          ||||||||||||||||||||
Sbjct: 11 atactccctccgtcccaaaa 30




>49957_osa-miRf10742-akr:pmrd
          Length = 128

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  atactccctccgtcccaaaa 49
           ||||||||||||||||||||
Sbjct: 116 atactccctccgtcccaaaa 97




>49818_osa-miRf10603-akr:pmrd
          Length = 97

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 123 ttttgggacggagggagtac 142
           ||||||||||||||||||||
Sbjct: 74  ttttgggacggagggagtac 93




>49658_osa-miRf10443-akr:pmrd
          Length = 108

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 122 tttttgggacggagggagta 141
           ||||||||||||||||||||
Sbjct: 33  tttttgggacggagggagta 14



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 31 tactccctccgtcccaaaaa 50
          ||||||||||||||||||||
Sbjct: 14 tactccctccgtcccaaaaa 33




>49537_osa-miRf10322-akr:pmrd
          Length = 105

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 30 atactccctccgtcccaaaa 49
          ||||||||||||||||||||
Sbjct: 9  atactccctccgtcccaaaa 28




>49536_osa-miRf10321-akr:pmrd
          Length = 105

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 30 atactccctccgtcccaaaa 49
          ||||||||||||||||||||
Sbjct: 9  atactccctccgtcccaaaa 28




>49517_osa-miRf10302-akr:pmrd
          Length = 103

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 30 atactccctccgtcccaaaa 49
          ||||||||||||||||||||
Sbjct: 6  atactccctccgtcccaaaa 25



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 30 atactccctccgtcccaaaa 49
          ||||||||||||||||||||
Sbjct: 98 atactccctccgtcccaaaa 79




>49370_osa-miRf10155-akr:pmrd
          Length = 69

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 31 tactccctccgtcccaaaaa 50
          ||||||||||||||||||||
Sbjct: 66 tactccctccgtcccaaaaa 47



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 122 tttttgggacggagggagta 141
           ||||||||||||||||||||
Sbjct: 47  tttttgggacggagggagta 66




>49366_osa-miRf10151-akr:pmrd
          Length = 82

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 30 atactccctccgtcccaaaa 49
          ||||||||||||||||||||
Sbjct: 80 atactccctccgtcccaaaa 61




>49152_osa-miR1862a:pmrd
          Length = 88

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 30 atactccctccgtcccaaaa 49
          ||||||||||||||||||||
Sbjct: 88 atactccctccgtcccaaaa 69




>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 30 atactccctccgtcccaaaa 49
          ||||||||||||||||||||
Sbjct: 81 atactccctccgtcccaaaa 62




>48647_hpi-miR1122:pmrd
          Length = 180

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 30 atactccctccgtcccaaaa 49
          ||||||||||||||||||||
Sbjct: 27 atactccctccgtcccaaaa 46



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  atactccctccgtcccaaaa 49
           ||||||||||||||||||||
Sbjct: 155 atactccctccgtcccaaaa 136