miRNEST 2.0, an integrative microRNA resource :: BLAST
>54628_sof-miR159a:pmrd
Length = 265
Score = 250 bits (126), Expect = 4e-67
Identities = 207/231 (89%), Gaps = 6/231 (2%)
Strand = Plus / Plus
Query: 1 agcgaagctcctatcattccaatgaagggcccttttcatgggtggttccgctgctcgttc 60
|||| |||||||||||||||||||||||||| || | | |||| ||||||||||||||||
Sbjct: 19 agcggagctcctatcattccaatgaagggccgttctgaagggttgttccgctgctcgttc 78
Query: 61 atggttcccactatcctatctcatcatgtatgtgtgtatgtactctagag-ggcccgaga 119
|||||||||||||||||||||||||||||||||||||||||| | | ||| || ||||
Sbjct: 79 atggttcccactatcctatctcatcatgtatgtgtgtatgtattttcgagagggaggaga 138
Query: 120 agagat----tcatgtggtcgtcagtctttgagataggcttgtggtttgcatgaccgagg 175
||| | || |||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 139 ggagctagactctcatggtggtc-gtctttgagataggcttgtggtttgcatgaccgagg 197
Query: 176 agctgcaccgtccccttgctggccgctctttggattgaagggagctctgca 226
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 agctgcaccgtccccttgctggccgctctttggattgaagggagctctgca 248
>54629_sof-miR159b:pmrd
Length = 266
Score = 244 bits (123), Expect = 2e-65
Identities = 208/232 (89%), Gaps = 7/232 (3%)
Strand = Plus / Plus
Query: 1 agcgaagctcctatcattccaatgaagggcccttttcatgggtggttccgctgctcgttc 60
|||| |||||||||||||||||||||||||| || | | |||||||||||||||||||||
Sbjct: 19 agcggagctcctatcattccaatgaagggccgttctgaagggtggttccgctgctcgttc 78
Query: 61 atggttcccactatcctatctcatcatgtatgtgtgtatgtactct---agagggccc-g 116
|||||||||||||||||||||||||||||||||||||||||| | | |||||| |
Sbjct: 79 atggttcccactatcctatctcatcatgtatgtgtgtatgtattttcggagagggaggag 138
Query: 117 agaag--agattcatgtggtcgtcagtctttgagataggcttgtggtttgcatgaccgag 174
|| || ||| || ||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 139 aggagctagactctcacggtggtc-gtctttgagataggcttgtggtttgcatgaccgag 197
Query: 175 gagctgcaccgtccccttgctggccgctctttggattgaagggagctctgca 226
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gagctgcaccgtccccttgctggccgctctttggattgaagggagctctgca 249
>54632_sof-miR159e:pmrd
Length = 264
Score = 228 bits (115), Expect = 1e-60
Identities = 202/228 (88%), Gaps = 6/228 (2%)
Strand = Plus / Plus
Query: 1 agcgaagctcctatcattccaatgaagggcccttttcatgggtggttccgctgctcgttc 60
|||| |||||||||||||||||||||||||| || | | |||||||||||||||||||||
Sbjct: 18 agcggagctcctatcattccaatgaagggccgttctgaagggtggttccgctgctcgttc 77
Query: 61 atggttcccactatcctatctcatcatgtatgtgtgtatgtactctagag-ggcccgaga 119
|||||||||||||||||||||||||||||||||||||||||| | | ||| || ||||
Sbjct: 78 atggttcccactatcctatctcatcatgtatgtgtgtatgtattttcgagagggaggaga 137
Query: 120 ag----agattcatgtggtcgtcagtctttgagataggcttgtggtttgcatgaccgagg 175
| ||| || ||| ||| |||||||||||||||||||||||||||||||||| |
Sbjct: 138 ggagctagactctcacggtggtc-gtctttgagataggcttgtggtttgcatgaccgaag 196
Query: 176 agctgcaccgtccccttgctggccgctctttggattgaagggagctct 223
||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 197 agctgcaccgtccccttgctggccgctctttggattgaaaggagctct 244
>54631_sof-miR159d:pmrd
Length = 265
Score = 220 bits (111), Expect = 4e-58
Identities = 205/233 (87%), Gaps = 10/233 (4%)
Strand = Plus / Plus
Query: 1 agcgaagctcctatcattccaatgaagggcccttttcatgggtggttccgctgctcgttc 60
|||| |||||||||||||||||||||||||| || | | |||| ||||||||||||||||
Sbjct: 19 agcggagctcctatcattccaatgaagggccgttctgaagggttgttccgctgctcgttc 78
Query: 61 atggttcccactatcctatctcatcatgtatgtgtgtatgtactctagag-ggcccgaga 119
|||||||||||||||||||||||||||||||||||||||||| | | ||| || ||||
Sbjct: 79 atggttcccactatcctatctcatcatgtatgtgtgtatgtattttcgagagggaggaga 138
Query: 120 agagat------tcatgtggtcgtcagtctttgagataggcttgtggtttgcatgaccga 173
||| | ||||| || ||| |||| ||||||| |||||||||||||||||||||
Sbjct: 139 ggagctagactctcatgggg--gtc-gtctatgagatacgcttgtggtttgcatgaccga 195
Query: 174 ggagctgcaccgtccccttgctggccgctctttggattgaagggagctctgca 226
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tgagctgcaccgtccccttgctggccgctctttggattgaagggagctctgca 248
>54930_zma-miR159a:pmrd
Length = 246
Score = 165 bits (83), Expect = 2e-41
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 140 gtctttgagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggcc 199
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 143 gtctttgagataggcttgtggtttgcatgaccgaggagctgcaccgcccccttgctggcc 202
Query: 200 gctctttggattgaagggagctctgca 226
|||||||||||||||||||||||||||
Sbjct: 203 gctctttggattgaagggagctctgca 229
Score = 107 bits (54), Expect = 4e-24
Identities = 82/90 (91%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 agcgaagctcctatcattccaatgaagggcccttttcatggg-tggttccgctgctcgtt 59
|||| |||||||||||||||||||||||| | || | ||| |||||||||||||||||
Sbjct: 19 agcggagctcctatcattccaatgaagggtcgttccgaagggctggttccgctgctcgtt 78
Query: 60 catggttcccactatcctatctcatcatgt 89
||||||||||||||||||||||||||||||
Sbjct: 79 catggttcccactatcctatctcatcatgt 108
>51338_pgl-miR159:pmrd
Length = 226
Score = 153 bits (77), Expect = 7e-38
Identities = 80/81 (98%)
Strand = Plus / Plus
Query: 144 ttgagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctc 203
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ttgagataggcttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgctc 205
Query: 204 tttggattgaagggagctctg 224
|||||||||||||||||||||
Sbjct: 206 tttggattgaagggagctctg 226
Score = 79.8 bits (40), Expect = 8e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 6 agctcctatcattccaatgaagggcccttttcatgggt-ggttccgctgctcgttcatgg 64
||||||||||||||||||||| || |||| ||||| ||| | |||||||||||||||
Sbjct: 4 agctcctatcattccaatgaaaggttgtttttgtgggttggtacagctgctcgttcatgg 63
Query: 65 ttcccactatcctatctcat 84
||||||||||||||||||||
Sbjct: 64 ttcccactatcctatctcat 83
>54392_sar-miR159:pmrd
Length = 175
Score = 117 bits (59), Expect = 4e-27
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 146 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 205
||||||||| ||||| ||||||||||||||||| ||| |||||||| |||||||||||||
Sbjct: 97 gagataggcctgtggcttgcatgaccgaggagccgcatcgtcccctcgctggccgctctt 156
Query: 206 tggattgaagggagctctg 224
|||||||||||||||||||
Sbjct: 157 tggattgaagggagctctg 175
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 40 gggtggttccgctgctcgttcatggttcccactatccta 78
||||||| | |||||||||||||||||||||||||||||
Sbjct: 40 gggtggtacagctgctcgttcatggttcccactatccta 78
>54931_zma-miR159b:pmrd
Length = 221
Score = 103 bits (52), Expect = 6e-23
Identities = 78/84 (92%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 144 ttgagataggcttgtggtttgcatgaccgaggagctgcaccgtcccctt-gctggccgct 202
||||||| ||||||||||||||||||||||||||||||| ||||||||| | || |||||
Sbjct: 122 ttgagatgggcttgtggtttgcatgaccgaggagctgca-cgtccccttcgttgaccgct 180
Query: 203 ctttggattgaagggagctctgca 226
|||||||||||||||||||||||
Sbjct: 181 gtttggattgaagggagctctgca 204
Score = 65.9 bits (33), Expect = 1e-11
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 38 atgggtggttccgctgctcgttcatggttcccactatcctatctcatca 86
||||||||| | ||||||||||||||||||||||| ||| |||||||||
Sbjct: 56 atgggtggtacagctgctcgttcatggttcccactgtcccatctcatca 104
>54934_zma-miR159e:pmrd
Length = 203
Score = 93.7 bits (47), Expect = 6e-20
Identities = 75/83 (90%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 144 ttgagataggcttgtggtttgcatgaccgaggagctgcaccgtcccctt-gctggccgct 202
||||||| |||||||||||||||||||||||||||||| ||||||||| | || |||||
Sbjct: 121 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgct 180
Query: 203 ctttggattgaagggagctctgc 225
|||||| |||||||||||||||
Sbjct: 181 gtttggagtgaagggagctctgc 203
Score = 65.9 bits (33), Expect = 1e-11
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 38 atgggtggttccgctgctcgttcatggttcccactatcctatctcatca 86
||||||||| | ||||||||||||||||||||||| ||| |||||||||
Sbjct: 38 atgggtggtacagctgctcgttcatggttcccactgtcccatctcatca 86
>48820_osa-miR159b:pmrd
Length = 188
Score = 89.7 bits (45), Expect = 9e-19
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 146 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 205
|||||||||||||||||||||||||| |||||| | | | | |||||||| || |||||
Sbjct: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctt 159
Query: 206 tggattgaagggagctctgca 226
|||||||||||||||||||||
Sbjct: 160 tggattgaagggagctctgca 180
Score = 54.0 bits (27), Expect = 5e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 50 gctgctcgttcatggttcccactatcctatctcat 84
|||||| |||||||||||||||||| |||||||||
Sbjct: 58 gctgcttgttcatggttcccactattctatctcat 92
>48657_hvv-miR159b:pmrd
Length = 174
Score = 85.7 bits (43), Expect = 1e-17
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 146 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 205
|||||||||||||||||||||||| |||||||| || || |||| |||| ||||| ||
Sbjct: 96 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 155
Query: 206 tggattgaagggagctctg 224
|||||||||||||||||||
Sbjct: 156 tggattgaagggagctctg 174
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 50 gctgctcgttcatggttcccactatcctatctc 82
|||||| ||||||||||||||||||||||||||
Sbjct: 49 gctgcttgttcatggttcccactatcctatctc 81
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 agctcctatcattccaatgaaggg 29
||||||||||||||||||||||||
Sbjct: 4 agctcctatcattccaatgaaggg 27
>54673_tae-miR159a:pmrd
Length = 177
Score = 81.8 bits (41), Expect = 2e-16
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 146 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 205
|||| |||| ||||||||||||||||||||||| || || |||| |||| ||||| ||
Sbjct: 96 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 155
Query: 206 tggattgaagggagctctgca 226
|||||||||||||||||||||
Sbjct: 156 tggattgaagggagctctgca 176
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 50 gctgctcgttcatggttcccactatcctatctc 82
|||||||||||||||||||||||||||||||||
Sbjct: 50 gctgctcgttcatggttcccactatcctatctc 82
>54674_tae-miR159b:pmrd
Length = 255
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 201 ctctttggattgaagggagctctgca 226
||||||||||||||||||||||||||
Sbjct: 227 ctctttggattgaagggagctctgca 252
>48819_osa-miR159a:pmrd
Length = 272
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 201 ctctttggattgaagggagctctgca 226
||||||||||||||||||||||||||
Sbjct: 239 ctctttggattgaagggagctctgca 264
>48796_oru-miR159:pmrd
Length = 274
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 201 ctctttggattgaagggagctctgca 226
||||||||||||||||||||||||||
Sbjct: 239 ctctttggattgaagggagctctgca 264
>48825_osa-miR159m:pmrd
Length = 249
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 201 ctctttggattgaagggagctctg 224
||||||||||||||||||||||||
Sbjct: 226 ctctttggattgaagggagctctg 249
>54937_zma-miR159m:pmrd
Length = 457
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 204 tttggattgaagggagctctgca 226
|||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgca 23
>54653_spr-miR159:pmrd
Length = 392
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 204 tttggattgaagggagctctgca 226
|||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgca 23
>48656_hvv-miR159a:pmrd
Length = 303
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 204 tttggattgaagggagctctgca 226
|||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgca 23
>54378_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 202 tctttggattgaagggagctct 223
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 202 tctttggattgaagggagctct 223
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>48699_mtr-miR159a:pmrd
Length = 168
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 202 tctttggattgaagggagctct 223
||||||||||||||||||||||
Sbjct: 146 tctttggattgaagggagctct 167
>48539_gma-miR159a:pmrd
Length = 214
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 202 tctttggattgaagggagctct 223
||||||||||||||||||||||
Sbjct: 173 tctttggattgaagggagctct 194
>48395_bra-miR159a:pmrd
Length = 185
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 202 tctttggattgaagggagctct 223
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 202 tctttggattgaagggagctct 223
||||||||||||||||||||||
Sbjct: 159 tctttggattgaagggagctct 180
>46932_ath-miR159b:pmrd
Length = 196
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 202 tctttggattgaagggagctct 223
||||||||||||||||||||||
Sbjct: 166 tctttggattgaagggagctct 187
>46931_ath-miR159a:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 202 tctttggattgaagggagctct 223
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>54777_vvi-miR159c:pmrd
Length = 190
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 204 tttggattgaagggagctct 223
||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctct 179
>54540_sly-miR159:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 204 tttggattgaagggagctct 223
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 204 tttggattgaagggagctct 223
||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctct 168
>51604_ptc-miR159c:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 204 tttggattgaagggagctct 223
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>51603_ptc-miR159b:pmrd
Length = 187
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 204 tttggattgaagggagctct 223
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>51602_ptc-miR159a:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 204 tttggattgaagggagctct 223
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>48701_mtr-miR159c:pmrd
Length = 44
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 204 tttggattgaagggagctct 223
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48686_ltu-miR159:pmrd
Length = 345
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 204 tttggattgaagggagctct 223
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
