miRNEST 2.0, an integrative microRNA resource :: BLAST
>42708_zma-MIR162:mirbase
Length = 130
Score = 121 bits (61), Expect = 1e-28
Identities = 115/129 (89%), Gaps = 3/129 (2%)
Strand = Plus / Plus
Query: 1 gggcgcagtggtttatcgatctcttccttgccttgtgctagtccag-aagtagtggtggt 59
||||||||||||||||||||||||||||||||||||||| |||| | | |||||||||
Sbjct: 3 gggcgcagtggtttatcgatctcttccttgccttgtgctggtccggccgggagtggtggt 62
Query: 60 tcaagcg-tttattgctgcaataacttgcaaaacaacgcgggaatcgatcgataaacctc 118
||||||| ||||||| |||| | || || ||||||||||||||||| ||||||||||||
Sbjct: 63 tcaagcgttttattgttgcagcagctcgc-aaacaacgcgggaatcggtcgataaacctc 121
Query: 119 tgcatccag 127
|||||||||
Sbjct: 122 tgcatccag 130
>41929_osa-MIR162a:mirbase
Length = 171
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 91 acaacgcgggaatcgatcgataaacctctgcatccag 127
|||||||||||||||||||||||||||||||||||||
Sbjct: 127 acaacgcgggaatcgatcgataaacctctgcatccag 163
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1 gggcgcagtggtttatcgatctcttccttgccttgtg 37
||||||||||||||||||||| ||||| |||||||||
Sbjct: 11 gggcgcagtggtttatcgatcccttccctgccttgtg 47
>41930_osa-MIR162b:mirbase
Length = 134
Score = 69.9 bits (35), Expect = 4e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 gggcgcagtggtttatcgatctcttccttgccttgtgct 39
||||||||||||||||||||||||||| |||||||||||
Sbjct: 13 gggcgcagtggtttatcgatctcttccctgccttgtgct 51
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 91 acaacgcgggaatcgatcgataaacctctgcatccag 127
||||||| ||||||||||||||| |||||||||||||
Sbjct: 88 acaacgcaggaatcgatcgataagcctctgcatccag 124
>41736_bdi-MIR162:mirbase
Length = 133
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 96 gcgggaatcgatcgataaacctctgcatcc 125
||||||||||||||||||||||||||||||
Sbjct: 100 gcgggaatcgatcgataaacctctgcatcc 129
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 gggcgcagtggtttatcgatctcttccttgccttgtgcta 40
||||||||||||||||||||| |||| ||||||||||||
Sbjct: 5 gggcgcagtggtttatcgatcctttccctgccttgtgcta 44
>41220_csi-MIR162:mirbase
Length = 201
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 100 gaatcgatcgataaacctctgcatccag 127
||||||||||||||||||||||||||||
Sbjct: 154 gaatcgatcgataaacctctgcatccag 181
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 100 gaatcgatcgataaacctctgcatccag 127
||||||||||||||||||||||||||||
Sbjct: 87 gaatcgatcgataaacctctgcatccag 114
>40437_gma-MIR162:mirbase
Length = 102
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 100 gaatcgatcgataaacctctgcatccag 127
||||||||||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatccag 93
>40342_rco-MIR162:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 100 gaatcgatcgataaacctctgcatccag 127
||||||||||||||||||||||||||||
Sbjct: 69 gaatcgatcgataaacctctgcatccag 96
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 100 gaatcgatcgataaacctctgcatccag 127
||||||||||||||||||||||||||||
Sbjct: 73 gaatcgatcgataaacctctgcatccag 100
>40025_ath-MIR162b:mirbase
Length = 111
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 100 gaatcgatcgataaacctctgcatccag 127
||||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccag 99
>39813_aly-MIR162b:mirbase
Length = 184
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 100 gaatcgatcgataaacctctgcatccag 127
||||||||||||||||||||||||||||
Sbjct: 106 gaatcgatcgataaacctctgcatccag 133
>41530_sly-MIR162:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 99 ggaatcgatcgataaacctctgcatccag 127
||||||| |||||||||||||||||||||
Sbjct: 71 ggaatcggtcgataaacctctgcatccag 99
>41090_tcc-MIR162:mirbase
Length = 131
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 103 tcgatcgataaacctctgcatccag 127
|||||||||||||||||||||||||
Sbjct: 87 tcgatcgataaacctctgcatccag 111
>41578_vvi-MIR162:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 100 gaatcgatcgataaacctctgcatccag 127
|||||| |||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccag 93
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 104 cgatcgataaacctctgcatccag 127
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 104 cgatcgataaacctctgcatccag 127
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 104 cgatcgataaacctctgcatccag 127
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
>40663_mtr-MIR162:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 100 gaatcgatcgataaacctctgcatccag 127
|||||| |||||||||||||||||||||
Sbjct: 80 gaatcggtcgataaacctctgcatccag 107
>40024_ath-MIR162a:mirbase
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 100 gaatcgatcgataaacctctgcatccag 127
|||| |||||||||||||||||||||||
Sbjct: 82 gaatagatcgataaacctctgcatccag 109
>39812_aly-MIR162a:mirbase
Length = 228
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 100 gaatcgatcgataaacctctgcatccag 127
|||| |||||||||||||||||||||||
Sbjct: 129 gaatagatcgataaacctctgcatccag 156
