miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54420_sbi-miR166e:pmrd
Length = 151
Score = 299 bits (151), Expect = 3e-82
Identities = 151/151 (100%)
Strand = Plus / Plus
Query: 1 caagttgaaggttaggttaatggggttgttgtctggttcaaggtcgccacagcagacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caagttgaaggttaggttaatggggttgttgtctggttcaaggtcgccacagcagacaaa 60
Query: 61 gcccattttgcttagcatgcagcatgggtttatctctattgatgatcgatctcggaccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcccattttgcttagcatgcagcatgggtttatctctattgatgatcgatctcggaccag 120
Query: 121 gcttcaatccctttaactagcatctgcatat 151
|||||||||||||||||||||||||||||||
Sbjct: 121 gcttcaatccctttaactagcatctgcatat 151
>54966_zma-miR166j:pmrd
Length = 154
Score = 79.8 bits (40), Expect = 5e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccctttaactagcatctgcatat 151
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 111 gatctcggaccaggcttcaatccctttaactagcgtctgcatat 154
Score = 63.9 bits (32), Expect = 3e-11
Identities = 48/52 (92%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 1 caagttgaaggttaggttaatggggttgtt-gtctggttcaaggtcgccaca 51
|||||||||| ||||||||| ||| ||||| |||||||||||||||||||||
Sbjct: 1 caagttgaagattaggttaaggggtttgtttgtctggttcaaggtcgccaca 52
>48855_osa-miR166l:pmrd
Length = 117
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccctttaactagca 142
|||||||||||||||||||||||||||||| ||||
Sbjct: 83 gatctcggaccaggcttcaatccctttaaccagca 117
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 11 gttaggttaatggggttgttgtctggttcaaggtcgccaca 51
|||||||||| ||| |||||||||||||||||||| |||||
Sbjct: 1 gttaggttaaggggattgttgtctggttcaaggtctccaca 41
>48854_osa-miR166k:pmrd
Length = 127
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 111 ctcggaccaggcttcaatccctttaac 137
|||||||||||||||||||||||||||
Sbjct: 96 ctcggaccaggcttcaatccctttaac 122
>54422_sbi-miR166g:pmrd
Length = 134
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 112 tcggaccaggcttcaatccctttaac 137
||||||||||||||||||||||||||
Sbjct: 95 tcggaccaggcttcaatccctttaac 120
>48856_osa-miR166m:pmrd
Length = 200
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 111 ctcggaccaggcttcaatccctttaactagcat 143
|||||||||||||||| |||||||||| |||||
Sbjct: 146 ctcggaccaggcttcattccctttaaccagcat 178
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 15 ggttaatggggttgttgtctggttcaagg 43
|||||| ||| ||||||||||||||||||
Sbjct: 30 ggttaaggggtttgttgtctggttcaagg 58
>54967_zma-miR166k:pmrd
Length = 168
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 112 tcggaccaggcttcaatcccttt 134
|||||||||||||||||||||||
Sbjct: 129 tcggaccaggcttcaatcccttt 151
>54973_zma-miR166q:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 106 tcgatctcggaccaggcttcaatccc 131
||||||||||||||||||||| ||||
Sbjct: 63 tcgatctcggaccaggcttcattccc 88
>54972_zma-miR166p:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 106 tcgatctcggaccaggcttcaatccc 131
||||||||||||||||||||| ||||
Sbjct: 65 tcgatctcggaccaggcttcattccc 90
>54961_zma-miR166e:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 106 tcgatctcggaccaggcttcaatccc 131
||||||||||||||||||||| ||||
Sbjct: 61 tcgatctcggaccaggcttcattccc 86
>54970_zma-miR166n:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccc 131
||||||||||||||||||| ||||
Sbjct: 70 gatctcggaccaggcttcattccc 93
>54960_zma-miR166d:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccc 131
||||||||||||||||||| ||||
Sbjct: 80 gatctcggaccaggcttcattccc 103
>54959_zma-miR166c:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccc 131
||||||||||||||||||| ||||
Sbjct: 68 gatctcggaccaggcttcattccc 91
>54958_zma-miR166b:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccc 131
||||||||||||||||||| ||||
Sbjct: 92 gatctcggaccaggcttcattccc 115
>54957_zma-miR166a:pmrd
Length = 213
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccc 131
||||||||||||||||||| ||||
Sbjct: 185 gatctcggaccaggcttcattccc 208
>54796_vvi-miR166h:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccc 131
||||||||||||||||||| ||||
Sbjct: 65 gatctcggaccaggcttcattccc 88
>54423_sbi-miR166h:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccc 131
||||||||||||||||||| ||||
Sbjct: 158 gatctcggaccaggcttcattccc 181
>54419_sbi-miR166d:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccc 131
||||||||||||||||||| ||||
Sbjct: 63 gatctcggaccaggcttcattccc 86
>54416_sbi-miR166a:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccc 131
||||||||||||||||||| ||||
Sbjct: 84 gatctcggaccaggcttcattccc 107
>51632_ptc-miR166h:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccc 131
||||||||||||||||||| ||||
Sbjct: 68 gatctcggaccaggcttcattccc 91
>51631_ptc-miR166g:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccc 131
||||||||||||||||||| ||||
Sbjct: 70 gatctcggaccaggcttcattccc 93
>48847_osa-miR166d:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccc 131
||||||||||||||||||| ||||
Sbjct: 87 gatctcggaccaggcttcattccc 110
>48845_osa-miR166b:pmrd
Length = 206
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccc 131
||||||||||||||||||| ||||
Sbjct: 164 gatctcggaccaggcttcattccc 187
>48844_osa-miR166a:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccc 131
||||||||||||||||||| ||||
Sbjct: 106 gatctcggaccaggcttcattccc 129
>48711_mtr-miR165:pmrd
Length = 82
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 108 gatctcggaccaggcttcaatccc 131
||||||||||||||||||| ||||
Sbjct: 58 gatctcggaccaggcttcattccc 81
