miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00075;mir-166;ABXC01006910.1/39676-39486 4558:Sorghum bicolor
(sorghum)
Length = 191
Score = 123 bits (62), Expect = 9e-28
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 124 ggagaccagcaggaggacggaggcgggtggtgtagatctcggaccaggcttcattccccc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ggagaccagcaggaggacggaggcgggtggtgtagatctcggaccaggcttcattccccc 187
Query: 184 ca 185
||
Sbjct: 188 ca 189
Score = 103 bits (52), Expect = 8e-22
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 1 aggggaatgttgtctggctcgggggcgccgccgctccgctccgctccttcct 52
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 aggggaatgttgtctggctcgggggcgccgccgctccgctccgctccttcct 56
>RF00075;mir-166;AY501431.1/1-212 4577:Zea mays
Length = 212
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 138 ggacggaggcgggtggtgtagatctcggaccaggcttcattcccccca 185
|||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 165 ggacggagacgagtggtgtagatctcggaccaggcttcattcccccca 212
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 aggggaatgttgtctggctcgggggcgccgccgc 34
|||||||||||||||||||||||| |||||||||
Sbjct: 3 aggggaatgttgtctggctcggggccgccgccgc 36
>RF00075;mir-166;AAAA02020902.1/104196-104017 39946:Oryza sativa
Indica Group
Length = 180
Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 154 tgtagatctcggaccaggcttcattcccccca 185
||||||||||||||||||||||||||||||||
Sbjct: 147 tgtagatctcggaccaggcttcattcccccca 178
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aggggaatgttgtctggctcgggg 24
||||||||||||||||||||||||
Sbjct: 5 aggggaatgttgtctggctcgggg 28
>RF00075;mir-166;AP003614.2/6887-6709 39947:Oryza sativa Japonica
Group
Length = 179
Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 154 tgtagatctcggaccaggcttcattcccccca 185
||||||||||||||||||||||||||||||||
Sbjct: 146 tgtagatctcggaccaggcttcattcccccca 177
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aggggaatgttgtctggctcgggg 24
||||||||||||||||||||||||
Sbjct: 5 aggggaatgttgtctggctcgggg 28
>RF00075;mir-166;AK251614.1/146-305 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 160
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 155 gtagatctcggaccaggcttcattcccccca 185
|||||||||||||||||||||||||||||||
Sbjct: 128 gtagatctcggaccaggcttcattcccccca 158
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aggggaatgttgtctggctcgggg 24
||||||||||||||||||||||||
Sbjct: 5 aggggaatgttgtctggctcgggg 28
>RF00075;mir-166;AARH01003608.1/24010-23917 3694:Populus trichocarpa
Length = 94
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattcccccca 185
||||||||||||||||||||||||||||
Sbjct: 65 gatctcggaccaggcttcattcccccca 92
>RF00075;mir-166;AARH01004299.1/36070-36161 3694:Populus trichocarpa
Length = 92
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattcccccca 185
||||||||||||||||||||||||||||
Sbjct: 63 gatctcggaccaggcttcattcccccca 90
>RF00075;mir-166;AASG02003618.1/9737-9830 3988:Ricinus communis
(castor bean)
Length = 94
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattcccccca 185
||||||||||||||||||||||||||||
Sbjct: 65 gatctcggaccaggcttcattcccccca 92
>RF00075;mir-166;AM448542.2/4591-4502 29760:Vitis vinifera
Length = 90
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattcccccca 185
||||||||||||||||||||||||||||
Sbjct: 61 gatctcggaccaggcttcattcccccca 88
>RF00075;mir-166;AC140029.19/70482-70585 3880:Medicago truncatula
(barrel medic)
Length = 104
Score = 54.0 bits (27), Expect = 7e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 159 atctcggaccaggcttcattcccccca 185
|||||||||||||||||||||||||||
Sbjct: 76 atctcggaccaggcttcattcccccca 102
>RF00075;mir-166;ABIM01027778.1/13122-13246 3649:Carica papaya
(papaya)
Length = 125
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 160 tctcggaccaggcttcattcccccca 185
||||||||||||||||||||||||||
Sbjct: 98 tctcggaccaggcttcattcccccca 123
>RF00075;mir-166;AC189313.2/128870-128784 51351:Brassica rapa subsp.
pekinensis
Length = 87
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 160 tctcggaccaggcttcattcccccca 185
||||||||||||||||||||||||||
Sbjct: 60 tctcggaccaggcttcattcccccca 85
>RF00075;mir-166;EU548871.1/183-293 3702:Arabidopsis thaliana (thale
cress)
Length = 111
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 160 tctcggaccaggcttcattcccccca 185
||||||||||||||||||||||||||
Sbjct: 84 tctcggaccaggcttcattcccccca 109
>RF00075;mir-166;AC144592.26/52711-52605 3880:Medicago truncatula
(barrel medic)
Length = 107
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 160 tctcggaccaggcttcattcccccca 185
||||||||||||||||||||||||||
Sbjct: 80 tctcggaccaggcttcattcccccca 105
>RF00075;mir-166;AC148487.14/34671-34762 3880:Medicago truncatula
(barrel medic)
Length = 92
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattccccc 183
||||||||||||||||||||||||||
Sbjct: 63 gatctcggaccaggcttcattccccc 88
>RF00075;mir-166;AC226041.1/11826-11708 4641:Musa acuminata
Length = 119
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 157 agatctcggaccaggcttcattcccc 182
||||||||||||||||||||||||||
Sbjct: 89 agatctcggaccaggcttcattcccc 114
>RF00075;mir-166;EU945393.1/89-202 4577:Zea mays
Length = 114
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 157 agatctcggaccaggcttcattcccc 182
||||||||||||||||||||||||||
Sbjct: 84 agatctcggaccaggcttcattcccc 109
>RF00075;mir-166;AY664413.1/238586-238494 4577:Zea mays
Length = 93
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 160 tctcggaccaggcttcattcccccca 185
||||||||||||||||||||||||||
Sbjct: 66 tctcggaccaggcttcattcccccca 91
>RF00075;mir-166;AY501432.1/1-122 4577:Zea mays
Length = 122
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 157 agatctcggaccaggcttcattcccc 182
||||||||||||||||||||||||||
Sbjct: 94 agatctcggaccaggcttcattcccc 119
>RF00075;mir-166;ABXC01000193.1/181030-180913 4558:Sorghum bicolor
(sorghum)
Length = 118
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 157 agatctcggaccaggcttcattcccc 182
||||||||||||||||||||||||||
Sbjct: 88 agatctcggaccaggcttcattcccc 113
>RF00075;mir-166;ABIM01012777.1/4514-4390 3649:Carica papaya
(papaya)
Length = 125
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattcccc 182
|||||||||||||||||||||||||
Sbjct: 96 gatctcggaccaggcttcattcccc 120
>RF00075;mir-166;EU956093.1/113-209 4577:Zea mays
Length = 97
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattcccc 182
|||||||||||||||||||||||||
Sbjct: 68 gatctcggaccaggcttcattcccc 92
>RF00075;mir-166;ABXC01002952.1/108749-108653 4558:Sorghum bicolor
(sorghum)
Length = 97
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattcccc 182
|||||||||||||||||||||||||
Sbjct: 68 gatctcggaccaggcttcattcccc 92
>RF00075;mir-166;AAAA02030332.1/11899-12019 39946:Oryza sativa
Indica Group
Length = 121
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattcccc 182
|||||||||||||||||||||||||
Sbjct: 92 gatctcggaccaggcttcattcccc 116
>RF00075;mir-166;AP008208.1/26148565-26148667 39947:Oryza sativa
Japonica Group
Length = 103
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattcccc 182
|||||||||||||||||||||||||
Sbjct: 74 gatctcggaccaggcttcattcccc 98
>RF00075;mir-166;ABIM01012128.1/12128-12036 3649:Carica papaya
(papaya)
Length = 93
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 68 tcggaccaggcttcattcccccca 91
>RF00075;mir-166;ABIM01020443.1/6232-6097 3649:Carica papaya
(papaya)
Length = 136
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 111 tcggaccaggcttcattcccccca 134
>RF00075;mir-166;ABIM01018276.1/2199-2062 3649:Carica papaya
(papaya)
Length = 138
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattccc 181
||||||||||||||||||||||||
Sbjct: 109 gatctcggaccaggcttcattccc 132
>RF00075;mir-166;AL590346.1/40100-40217 3702:Arabidopsis thaliana
(thale cress)
Length = 118
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 160 tctcggaccaggcttcattccccc 183
||||||||||||||||||||||||
Sbjct: 91 tctcggaccaggcttcattccccc 114
>RF00075;mir-166;EU548832.1/235-380 3702:Arabidopsis thaliana (thale
cress)
Length = 146
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 121 tcggaccaggcttcattcccccca 144
>RF00075;mir-166;EU548853.1/145-266 3702:Arabidopsis thaliana (thale
cress)
Length = 122
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 97 tcggaccaggcttcattcccccca 120
>RF00075;mir-166;AARH01001058.1/130278-130374 3694:Populus
trichocarpa
Length = 97
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 72 tcggaccaggcttcattcccccca 95
>RF00075;mir-166;AARH01006070.1/215270-215403 3694:Populus
trichocarpa
Length = 134
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 109 tcggaccaggcttcattcccccca 132
>RF00075;mir-166;AARH01001165.1/83261-83385 3694:Populus trichocarpa
Length = 125
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 100 tcggaccaggcttcattcccccca 123
>RF00075;mir-166;AARH01000156.1/300448-300294 3694:Populus
trichocarpa
Length = 155
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 130 tcggaccaggcttcattcccccca 153
>RF00075;mir-166;AASG02002547.1/1046-1166 3988:Ricinus communis
(castor bean)
Length = 121
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 96 tcggaccaggcttcattcccccca 119
>RF00075;mir-166;AASG02010073.1/7999-8131 3988:Ricinus communis
(castor bean)
Length = 133
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 108 tcggaccaggcttcattcccccca 131
>RF00075;mir-166;AASG02007713.1/11405-11313 3988:Ricinus communis
(castor bean)
Length = 93
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 68 tcggaccaggcttcattcccccca 91
>RF00075;mir-166;BABK01006649.1/1239-1127 34305:Lotus japonicus
Length = 113
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 88 tcggaccaggcttcattcccccca 111
>RF00075;mir-166;AP009261.1/72240-72093 4081:Solanum lycopersicum
Length = 148
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 123 tcggaccaggcttcattcccccca 146
>RF00075;mir-166;AY599420.1/1-185 4096:Nicotiana sylvestris (wood
tobacco)
Length = 185
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 162 tcggaccaggcttcattcccccca 185
>RF00075;mir-166;AM468140.2/16750-16595 29760:Vitis vinifera
Length = 156
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 131 tcggaccaggcttcattcccccca 154
>RF00075;mir-166;CAAP02000145.1/77043-77192 29760:Vitis vinifera
Length = 150
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 125 tcggaccaggcttcattcccccca 148
>RF00075;mir-166;ABXC01000715.1/152379-152276 4558:Sorghum bicolor
(sorghum)
Length = 104
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 79 tcggaccaggcttcattcccccca 102
>RF00075;mir-166;AAAA02007901.1/15784-15895 39946:Oryza sativa
Indica Group
Length = 112
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 162 tcggaccaggcttcattcccccca 185
||||||||||||||||||||||||
Sbjct: 87 tcggaccaggcttcattcccccca 110
>RF00075;mir-166;DQ908436.1/479-591 3635:Gossypium hirsutum (upland
cotton)
Length = 113
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattcc 180
|||||||||||||||||||||||
Sbjct: 84 gatctcggaccaggcttcattcc 106
>RF00075;mir-166;EU548914.1/298-397 3702:Arabidopsis thaliana (thale
cress)
Length = 100
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 160 tctcggaccaggcttcattcccc 182
|||||||||||||||||||||||
Sbjct: 73 tctcggaccaggcttcattcccc 95
>RF00075;mir-166;AARH01005662.1/95261-95577 3694:Populus trichocarpa
Length = 317
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattcc 180
|||||||||||||||||||||||
Sbjct: 288 gatctcggaccaggcttcattcc 310
>RF00075;mir-166;AARH01007982.1/90633-90310 3694:Populus trichocarpa
Length = 324
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattcc 180
|||||||||||||||||||||||
Sbjct: 295 gatctcggaccaggcttcattcc 317
>RF00075;mir-166;AARH01009662.1/134102-134198 3694:Populus
trichocarpa
Length = 97
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 160 tctcggaccaggcttcattcccc 182
|||||||||||||||||||||||
Sbjct: 70 tctcggaccaggcttcattcccc 92
>RF00075;mir-166;AC148816.3/87512-87332 3880:Medicago truncatula
(barrel medic)
Length = 181
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattcc 180
|||||||||||||||||||||||
Sbjct: 152 gatctcggaccaggcttcattcc 174
>RF00075;mir-166;AC235255.1/12904-12739 3847:Glycine max (soybean)
Length = 166
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattcc 180
|||||||||||||||||||||||
Sbjct: 137 gatctcggaccaggcttcattcc 159
>RF00075;mir-166;BABK01014008.1/1327-1223 34305:Lotus japonicus
Length = 105
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 161 ctcggaccaggcttcattccccc 183
|||||||||||||||||||||||
Sbjct: 79 ctcggaccaggcttcattccccc 101
>RF00075;mir-166;AM464541.1/10325-10481 29760:Vitis vinifera
Length = 157
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 160 tctcggaccaggcttcattcccc 182
|||||||||||||||||||||||
Sbjct: 130 tctcggaccaggcttcattcccc 152
>RF00075;mir-166;CAAP02007291.1/14711-14590 29760:Vitis vinifera
Length = 122
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattcc 180
|||||||||||||||||||||||
Sbjct: 93 gatctcggaccaggcttcattcc 115
>RF00075;mir-166;ABXC01000331.1/255164-255261 4558:Sorghum bicolor
(sorghum)
Length = 98
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 160 tctcggaccaggcttcattcccc 182
|||||||||||||||||||||||
Sbjct: 71 tctcggaccaggcttcattcccc 93
>RF00075;mir-166;AC027660.2/136704-136618 39947:Oryza sativa
Japonica Group
Length = 87
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 160 tctcggaccaggcttcattcccc 182
|||||||||||||||||||||||
Sbjct: 60 tctcggaccaggcttcattcccc 82
>RF00075;mir-166;AAAA02029560.1/62131-62045 39946:Oryza sativa
Indica Group
Length = 87
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 160 tctcggaccaggcttcattcccc 182
|||||||||||||||||||||||
Sbjct: 60 tctcggaccaggcttcattcccc 82
>RF00075;mir-166;AP008218.1/18370254-18370388 39947:Oryza sativa
Japonica Group
Length = 135
Score = 46.1 bits (23), Expect = 2e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 158 gatctcggaccaggcttcattcc 180
|||||||||||||||||||||||
Sbjct: 106 gatctcggaccaggcttcattcc 128
>RF00075;mir-166;AARH01006305.1/50528-50441 3694:Populus trichocarpa
Length = 88
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 ctcggaccaggcttcattcccc 182
||||||||||||||||||||||
Sbjct: 62 ctcggaccaggcttcattcccc 83
>RF00075;mir-166;AC209184.1/141607-141700 3694:Populus trichocarpa
Length = 94
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 ctcggaccaggcttcattcccc 182
||||||||||||||||||||||
Sbjct: 68 ctcggaccaggcttcattcccc 89
>RF00075;mir-166;AASG02003407.1/927-777 3988:Ricinus communis
(castor bean)
Length = 151
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 ctcggaccaggcttcattcccc 182
||||||||||||||||||||||
Sbjct: 125 ctcggaccaggcttcattcccc 146
>RF00075;mir-166;AC155889.2/42101-41932 3880:Medicago truncatula
(barrel medic)
Length = 170
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 atctcggaccaggcttcattcc 180
||||||||||||||||||||||
Sbjct: 142 atctcggaccaggcttcattcc 163
>RF00075;mir-166;CT009488.4/103389-103285 3880:Medicago truncatula
(barrel medic)
Length = 105
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 160 tctcggaccaggcttcattcccccca 185
||||||||||||||||||||| ||||
Sbjct: 78 tctcggaccaggcttcattcctccca 103
>RF00075;mir-166;BABK01008352.1/1692-1590 34305:Lotus japonicus
Length = 103
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tctcggaccaggcttcattccc 181
||||||||||||||||||||||
Sbjct: 76 tctcggaccaggcttcattccc 97
>RF00075;mir-166;CAAP02000526.1/74430-74281 29760:Vitis vinifera
Length = 150
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 ctcggaccaggcttcattcccc 182
||||||||||||||||||||||
Sbjct: 124 ctcggaccaggcttcattcccc 145
>RF00075;mir-166;AY664417.1/307265-307178 4577:Zea mays
Length = 88
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 160 tctcggaccaggcttcattcccccca 185
||||||||||||||||||||| ||||
Sbjct: 61 tctcggaccaggcttcattcctccca 86
>RF00075;mir-166;ABXC01000758.1/126828-126715 4558:Sorghum bicolor
(sorghum)
Length = 114
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 ctcggaccaggcttcattcccc 182
||||||||||||||||||||||
Sbjct: 88 ctcggaccaggcttcattcccc 109
>RF00075;mir-166;AC138001.2/40361-40495 39947:Oryza sativa Japonica
Group
Length = 135
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 155 gtagatctcggaccaggcttcattcc 180
|||||||||||| |||||||||||||
Sbjct: 103 gtagatctcggatcaggcttcattcc 128
>RF00075;mir-166;ABEU01001509.1/37358-37431 145481:Physcomitrella
patens subsp. patens
Length = 74
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 ctcggaccaggcttcattcccc 182
||||||||||||||||||||||
Sbjct: 48 ctcggaccaggcttcattcccc 69
