miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54425_sbi-miR166j:pmrd
Length = 108
Score = 214 bits (108), Expect = 1e-56
Identities = 108/108 (100%)
Strand = Plus / Plus
Query: 1 tgtggaatgttgtctggttctaggcctctctctacatgcaagcatggatgtagtagcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtggaatgttgtctggttctaggcctctctctacatgcaagcatggatgtagtagcagc 60
Query: 61 ctactgcaattgcttgctgggacctcggaccaggcttcattcccctca 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctactgcaattgcttgctgggacctcggaccaggcttcattcccctca 108
>48844_osa-miR166a:pmrd
Length = 145
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 78 tgggacctcggaccaggcttcattcccctca 108
||||| |||||||||||||||||||||||||
Sbjct: 103 tgggatctcggaccaggcttcattcccctca 133
>54792_vvi-miR166d:pmrd
Length = 160
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 83 cctcggaccaggcttcattcccctca 108
||||||||||||||||||||||||||
Sbjct: 127 cctcggaccaggcttcattcccctca 152
>51636_ptc-miR166l:pmrd
Length = 97
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 83 cctcggaccaggcttcattcccctca 108
||||||||||||||||||||||||||
Sbjct: 66 cctcggaccaggcttcattcccctca 91
>51633_ptc-miR166i:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 83 cctcggaccaggcttcattcccctca 108
||||||||||||||||||||||||||
Sbjct: 72 cctcggaccaggcttcattcccctca 97
>51373_ppt-miR166f:pmrd
Length = 123
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 83 cctcggaccaggcttcattcccctca 108
||||||||||||||||||||||||||
Sbjct: 72 cctcggaccaggcttcattcccctca 97
>54972_zma-miR166p:pmrd
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccctca 108
|||||||||||||||||||||||||
Sbjct: 70 ctcggaccaggcttcattcccctca 94
>54577_smo-miR166b:pmrd
Length = 136
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccctca 108
|||||||||||||||||||||||||
Sbjct: 98 ctcggaccaggcttcattcccctca 122
>54576_smo-miR166a:pmrd
Length = 145
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccctca 108
|||||||||||||||||||||||||
Sbjct: 107 ctcggaccaggcttcattcccctca 131
>51637_ptc-miR166m:pmrd
Length = 105
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccctca 108
|||||||||||||||||||||||||
Sbjct: 75 ctcggaccaggcttcattcccctca 99
>48849_osa-miR166f:pmrd
Length = 107
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccctca 108
|||||||||||||||||||||||||
Sbjct: 71 ctcggaccaggcttcattcccctca 95
>48847_osa-miR166d:pmrd
Length = 125
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccctca 108
|||||||||||||||||||||||||
Sbjct: 90 ctcggaccaggcttcattcccctca 114
>46951_ath-miR166g:pmrd
Length = 122
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccctca 108
|||||||||||||||||||||||||
Sbjct: 84 ctcggaccaggcttcattcccctca 108
>54973_zma-miR166q:pmrd
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccctc 107
||||||||||||||||||||||||
Sbjct: 68 ctcggaccaggcttcattcccctc 91
>54970_zma-miR166n:pmrd
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccctc 107
||||||||||||||||||||||||
Sbjct: 73 ctcggaccaggcttcattcccctc 96
>54795_vvi-miR166g:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 69 tcggaccaggcttcattcccctca 92
>54794_vvi-miR166f:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 69 tcggaccaggcttcattcccctca 92
>54578_smo-miR166c:pmrd
Length = 138
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 107 tcggaccaggcttcattcccctca 130
>54543_sly-miR166a:pmrd
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 86 tcggaccaggcttcattcccctca 109
>51630_ptc-miR166f:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccctca 99
>51628_ptc-miR166d:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccctca 99
>51559_pta-miR166b:pmrd
Length = 125
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 90 tcggaccaggcttcattcccctca 113
>51374_ppt-miR166g:pmrd
Length = 146
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 96 tcggaccaggcttcattcccctca 119
>51372_ppt-miR166e:pmrd
Length = 146
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 96 tcggaccaggcttcattcccctca 119
>51369_ppt-miR166b:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctca 97
>51368_ppt-miR166a:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccctca 97
>48856_osa-miR166m:pmrd
Length = 200
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 81 gacctcggaccaggcttcattccc 104
||||||||||||||||||||||||
Sbjct: 143 gacctcggaccaggcttcattccc 166
>48550_gma-miR166n:pmrd
Length = 409
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 1 tcggaccaggcttcattcccctca 24
>48344_bna-miR166c:pmrd
Length = 128
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 93 tcggaccaggcttcattcccctca 116
>48343_bna-miR166b:pmrd
Length = 118
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 91 tcggaccaggcttcattcccctca 114
>46950_ath-miR166f:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 78 tcggaccaggcttcattcccctca 101
>46949_ath-miR166e:pmrd
Length = 143
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 119 tcggaccaggcttcattcccctca 142
>46870_aqc-miR166e:pmrd
Length = 147
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctca 108
||||||||||||||||||||||||
Sbjct: 121 tcggaccaggcttcattcccctca 144
>46866_aqc-miR166a:pmrd
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 81 gacctcggaccaggcttcattcccctca 108
||||||||||||||||||||||| ||||
Sbjct: 82 gacctcggaccaggcttcattcctctca 109
>51371_ppt-miR166d:pmrd
Length = 128
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctc 107
|||||||||||||||||||||||
Sbjct: 82 tcggaccaggcttcattcccctc 104
>51370_ppt-miR166c:pmrd
Length = 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccctc 107
|||||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattcccctc 99
>54974_zma-miR166r:pmrd
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 62 ctcggaccaggcttcattcccc 83
>54971_zma-miR166o:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 68 ctcggaccaggcttcattcccc 89
>54965_zma-miR166i:pmrd
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 62 ctcggaccaggcttcattcccc 83
>54961_zma-miR166e:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 66 ctcggaccaggcttcattcccc 87
>54960_zma-miR166d:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 83 ctcggaccaggcttcattcccc 104
>54959_zma-miR166c:pmrd
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 71 ctcggaccaggcttcattcccc 92
>54958_zma-miR166b:pmrd
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 95 ctcggaccaggcttcattcccc 116
>54957_zma-miR166a:pmrd
Length = 213
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 188 ctcggaccaggcttcattcccc 209
>54796_vvi-miR166h:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 68 ctcggaccaggcttcattcccc 89
>54424_sbi-miR166i:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 65 ctcggaccaggcttcattcccc 86
>54423_sbi-miR166h:pmrd
Length = 185
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 161 ctcggaccaggcttcattcccc 182
>54419_sbi-miR166d:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 66 ctcggaccaggcttcattcccc 87
>54416_sbi-miR166a:pmrd
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 87 ctcggaccaggcttcattcccc 108
>54379_pvu-miR166:pmrd
Length = 144
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 113 ctcggaccaggcttcattcccc 134
>51632_ptc-miR166h:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 71 ctcggaccaggcttcattcccc 92
>51631_ptc-miR166g:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 73 ctcggaccaggcttcattcccc 94
>51379_ppt-miR166l:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 cggaccaggcttcattcccctc 107
||||||||||||||||||||||
Sbjct: 85 cggaccaggcttcattcccctc 106
>51378_ppt-miR166k:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 cggaccaggcttcattcccctc 107
||||||||||||||||||||||
Sbjct: 79 cggaccaggcttcattcccctc 100
>51377_ppt-miR166j:pmrd
Length = 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 86 cggaccaggcttcattcccctc 107
||||||||||||||||||||||
Sbjct: 83 cggaccaggcttcattcccctc 104
>51376_ppt-miR166i:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccct 106
||||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccct 95
>51375_ppt-miR166h:pmrd
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccct 106
||||||||||||||||||||||
Sbjct: 78 tcggaccaggcttcattcccct 99
>48845_osa-miR166b:pmrd
Length = 206
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 167 ctcggaccaggcttcattcccc 188
>48714_mtr-miR166d:pmrd
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 76 ctcggaccaggcttcattcccc 97
>48711_mtr-miR165:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 61 ctcggaccaggcttcattcccc 82
>48553_gma-miR166r:pmrd
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 cctcggaccaggcttcattccc 104
||||||||||||||||||||||
Sbjct: 114 cctcggaccaggcttcattccc 135
>48549_gma-miR166b:pmrd
Length = 167
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 127 ctcggaccaggcttcattcccc 148
>48345_bna-miR166d:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 76 ctcggaccaggcttcattcccc 97
>46948_ath-miR166d:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 86 ctcggaccaggcttcattcccc 107
>46947_ath-miR166c:pmrd
Length = 139
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 ctcggaccaggcttcattcccc 105
||||||||||||||||||||||
Sbjct: 102 ctcggaccaggcttcattcccc 123
>54976_zma-miR166t:pmrd
Length = 76
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccc 105
|||||||||||||||||||||
Sbjct: 56 tcggaccaggcttcattcccc 76
>54975_zma-miR166s:pmrd
Length = 78
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccc 105
|||||||||||||||||||||
Sbjct: 58 tcggaccaggcttcattcccc 78
>54964_zma-miR166h:pmrd
Length = 76
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccc 105
|||||||||||||||||||||
Sbjct: 56 tcggaccaggcttcattcccc 76
>54963_zma-miR166g:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccc 105
|||||||||||||||||||||
Sbjct: 106 tcggaccaggcttcattcccc 126
>54962_zma-miR166f:pmrd
Length = 78
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccc 105
|||||||||||||||||||||
Sbjct: 58 tcggaccaggcttcattcccc 78
>54793_vvi-miR166e:pmrd
Length = 166
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccc 105
|||||||||||||||||||||
Sbjct: 135 tcggaccaggcttcattcccc 155
>54791_vvi-miR166c:pmrd
Length = 160
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 tcggaccaggcttcattcccc 105
|||||||||||||||||||||
Sbjct: 129 tcggaccaggcttcattcccc 149