miRNEST 2.0, an integrative microRNA resource :: BLAST
>42459_sof-MIR168a:mirbase
Length = 104
Score = 131 bits (66), Expect = 1e-31
Identities = 96/105 (91%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 1 gccgccgcgccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacg 60
|||||||||||||||||||||||||||||||||||||||||| |||||| | | ||||
Sbjct: 1 gccgccgcgccgcctcgggctcgcttggtgcagatcgggacccgccgcccgg--ccgacg 58
Query: 61 ggacagatcccgccttgcaccaagtgaatccgagccggagcagcc 105
|||| ||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 59 ggacggatcccgccttgcaccaagtgaatcggagccggcgcagcc 103
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 123 bits (62), Expect = 3e-29
Identities = 92/101 (91%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 4 gccgcgccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacggga 63
||||||||||||||||||||||||||||||||||||||| |||||| | | |||||||
Sbjct: 1 gccgcgccgcctcgggctcgcttggtgcagatcgggacccgccgcccgg--ccgacggga 58
Query: 64 cagatcccgccttgcaccaagtgaatccgagccggagcagc 104
| ||||||||||||||||||||||||| ||||||| |||||
Sbjct: 59 cggatcccgccttgcaccaagtgaatcggagccggcgcagc 99
>42741_zma-MIR168a:mirbase
Length = 104
Score = 119 bits (60), Expect = 4e-28
Identities = 87/95 (91%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 4 gccgcgccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacggga 63
||||||||||||||||||||||||||||||||||||||| |||||| | | |||||||
Sbjct: 4 gccgcgccgcctcgggctcgcttggtgcagatcgggacccgccgcccgg--ccgacggga 61
Query: 64 cagatcccgccttgcaccaagtgaatccgagccgg 98
| ||||||||||||||||||||||||| |||||||
Sbjct: 62 cggatcccgccttgcaccaagtgaatcggagccgg 96
>42742_zma-MIR168b:mirbase
Length = 104
Score = 111 bits (56), Expect = 1e-25
Identities = 92/103 (89%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 2 ccgccgcgccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgg 61
||||||||||| ||||||||||||||||||||||||||||| |||||| | | |||||
Sbjct: 2 ccgccgcgccgtctcgggctcgcttggtgcagatcgggacccgccgcccgg--ccgacgg 59
Query: 62 gacagatcccgccttgcaccaagtgaatccgagccggagcagc 104
||| |||||||||||||| |||||||||| ||||||| |||||
Sbjct: 60 gacggatcccgccttgcatcaagtgaatcggagccggcgcagc 102
>41888_hvu-MIR168:mirbase
Length = 106
Score = 105 bits (53), Expect = 6e-24
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 8 cgccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacaga 67
||||||||||||||||||||||||||||||||||| ||||| || | |||||| | ||
Sbjct: 10 cgccgcctcgggctcgcttggtgcagatcgggaccctccgcc-cgccccgacgggccgga 68
Query: 68 tcccgccttgcaccaagtgaatccgagccggagcagc 104
||||||||||||||||||||||| ||||||| |||||
Sbjct: 69 tcccgccttgcaccaagtgaatcggagccggcgcagc 105
>41887_hvu-MIR168:mirbase
Length = 106
Score = 105 bits (53), Expect = 6e-24
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 8 cgccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacaga 67
||||||||||||||||||||||||||||||||||| ||||| || | |||||| | ||
Sbjct: 10 cgccgcctcgggctcgcttggtgcagatcgggaccctccgcc-cgccccgacgggccgga 68
Query: 68 tcccgccttgcaccaagtgaatccgagccggagcagc 104
||||||||||||||||||||||| ||||||| |||||
Sbjct: 69 tcccgccttgcaccaagtgaatcggagccggcgcagc 105
>41753_bdi-MIR168:mirbase
Length = 136
Score = 97.6 bits (49), Expect = 2e-21
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 8 cgccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacaga 67
||||||||||||||||||||||||||||||||||| ||||| | | | |||| | ||
Sbjct: 18 cgccgcctcgggctcgcttggtgcagatcgggaccctccgcccgcccccgccgggccgga 77
Query: 68 tcccgccttgcaccaagtgaatccgagccggagcagc 104
||||||||||||||||||||||| ||||||| |||||
Sbjct: 78 tcccgccttgcaccaagtgaatcggagccggcgcagc 114
>42460_sof-MIR168b:mirbase
Length = 103
Score = 83.8 bits (42), Expect = 2e-17
Identities = 79/89 (88%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 17 gggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacagatcccgcctt 76
|||||||||||| ||||||||||||| |||||| || |||||||| |||||||||||
Sbjct: 17 gggctcgcttgg-gcagatcgggacccgccgcccggcc--gacgggacggatcccgcctt 73
Query: 77 gcaccaagtgaatccgagccggagcagcc 105
|||||||||||||| ||||||| ||||||
Sbjct: 74 gcaccaagtgaatcggagccggcgcagcc 102
>41962_osa-MIR168a:mirbase
Length = 87
Score = 79.8 bits (40), Expect = 4e-16
Identities = 78/88 (88%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 11 cgcctcgggctcgcttggtgcagatcgggacctgccgccg-tgctcggacgggacagatc 69
|||||||||||||||||||||||||||||||| ||||||| ||| | ||| | ||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgct-gccggggccggatc 59
Query: 70 ccgccttgcaccaagtgaatccgagccg 97
||||||||||||||||||||| ||||||
Sbjct: 60 ccgccttgcaccaagtgaatcggagccg 87
>41961_osa-MIR168a:mirbase
Length = 87
Score = 79.8 bits (40), Expect = 4e-16
Identities = 78/88 (88%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 11 cgcctcgggctcgcttggtgcagatcgggacctgccgccg-tgctcggacgggacagatc 69
|||||||||||||||||||||||||||||||| ||||||| ||| | ||| | ||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgct-gccggggccggatc 59
Query: 70 ccgccttgcaccaagtgaatccgagccg 97
||||||||||||||||||||| ||||||
Sbjct: 60 ccgccttgcaccaagtgaatcggagccg 87
>40271_bna-MIR168:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 66 gatcccgccttgcaccaagtgaatccgag 94
|||||||||||| | ||||||||||||||
Sbjct: 95 gatcccgccttgtatcaagtgaatccgag 123
