miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54437_sbi-miR169a:pmrd
Length = 91
Score = 172 bits (87), Expect = 3e-44
Identities = 90/91 (98%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccgatcgatcgatgcaaactcctctgatgtctgatctcatcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccgatcgatcgatgcaaactcctctgatgtctgatctcatcag 60
Query: 61 attatcgttgtcggcaagttgttcttggcta 91
|||||||||||||| ||||||||||||||||
Sbjct: 61 attatcgttgtcggaaagttgttcttggcta 91
>48876_osa-miR169a:pmrd
Length = 173
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccgatcgatcgat 30
||||||||||||||||||||||||||||||
Sbjct: 38 cagccaaggatgacttgccgatcgatcgat 67
>55023_zma-miR169u:pmrd
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccgatcgat 26
||||||||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccgatcgat 26
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 71 tcggcaagttgttcttggcta 91
|||||||||||||||||||||
Sbjct: 70 tcggcaagttgttcttggcta 90
>55003_zma-miR169a:pmrd
Length = 130
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccgatcgat 26
||||||||||||||||||||||||||
Sbjct: 21 cagccaaggatgacttgccgatcgat 46
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 71 tcggcaagttgttcttggcta 91
|||||||||||||||||||||
Sbjct: 90 tcggcaagttgttcttggcta 110
>55022_zma-miR169t:pmrd
Length = 116
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccgatcgatcg 28
||||||||||||||||||||||| ||||
Sbjct: 1 cagccaaggatgacttgccgatctatcg 28
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 71 tcggcaagttgttcttggcta 91
|||||||||||||||||||||
Sbjct: 96 tcggcaagttgttcttggcta 116
>55004_zma-miR169b:pmrd
Length = 156
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccgatcgatcg 28
||||||||||||||||||||||| ||||
Sbjct: 21 cagccaaggatgacttgccgatctatcg 48
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 71 tcggcaagttgttcttggcta 91
|||||||||||||||||||||
Sbjct: 116 tcggcaagttgttcttggcta 136
>54446_sbi-miR169j:pmrd
Length = 123
Score = 46.1 bits (23), Expect = 4e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccgatcgatcgatgc 32
||||||||||||||||||| ||||||||||
Sbjct: 4 agccaaggatgacttgccggccgatcgatgc 34
>48562_gma-miR169b:pmrd
Length = 183
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccgat 22
||||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccgat 32
>48351_bna-miR169b:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccgat 22
||||||||||||||||||||||
Sbjct: 18 cagccaaggatgacttgccgat 39
>48350_bna-miR169a:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccgat 22
||||||||||||||||||||||
Sbjct: 19 cagccaaggatgacttgccgat 40
>46960_ath-miR169a:pmrd
Length = 226
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccgat 22
||||||||||||||||||||||
Sbjct: 18 cagccaaggatgacttgccgat 39
>55021_zma-miR169s:pmrd
Length = 150
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccga 21
|||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccga 21
>54809_vvi-miR169g:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccga 21
|||||||||||||||||||||
Sbjct: 13 cagccaaggatgacttgccga 33
>54808_vvi-miR169f:pmrd
Length = 184
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccga 21
|||||||||||||||||||||
Sbjct: 13 cagccaaggatgacttgccga 33
>54549_sly-miR169c:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccga 21
|||||||||||||||||||||
Sbjct: 41 cagccaaggatgacttgccga 61
>54367_ptr-miR169a:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccga 21
|||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccga 21
>52003_ptc-miRf10181-akr:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccga 21
|||||||||||||||||||||
Sbjct: 10 cagccaaggatgacttgccga 30
>51660_ptc-miR169c:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccga 21
|||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccga 31
>51659_ptc-miR169b:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccga 21
|||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccga 31
>51652_ptc-miR169a:pmrd
Length = 165
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccga 21
|||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccga 31
>48719_mtr-miR169c:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 cagccaaggatgacttgccga 21
|||||||||||||||||||||
Sbjct: 82 cagccaaggatgacttgccga 62
>48718_mtr-miR169b:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccga 21
|||||||||||||||||||||
Sbjct: 21 cagccaaggatgacttgccga 41
>48717_mtr-miR169a:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccga 21
|||||||||||||||||||||
Sbjct: 21 cagccaaggatgacttgccga 41
>48309_bdi-miR169a:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccga 21
|||||||||||||||||||||
Sbjct: 16 cagccaaggatgacttgccga 36
>46964_ath-miR169e:pmrd
Length = 217
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccgat 22
|||||||||||||||||||||
Sbjct: 71 agccaaggatgacttgccgat 91
>46963_ath-miR169d:pmrd
Length = 154
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccgat 22
|||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccgat 63
>55020_zma-miR169r:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>55005_zma-miR169c:pmrd
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 21 cagccaaggatgacttgccg 40
>54825_vvi-miR169w:pmrd
Length = 143
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 13 cagccaaggatgacttgccg 32
>54821_vvi-miR169s:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 13 cagccaaggatgacttgccg 32
>54813_vvi-miR169k:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 13 cagccaaggatgacttgccg 32
>54812_vvi-miR169j:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 13 cagccaaggatgacttgccg 32
>54805_vvi-miR169c:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 13 cagccaaggatgacttgccg 32
>54803_vvi-miR169a:pmrd
Length = 124
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 13 cagccaaggatgacttgccg 32
>54547_sly-miR169a:pmrd
Length = 149
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 41 cagccaaggatgacttgccg 60
>54447_sbi-miR169k:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>54438_sbi-miR169b:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>54091_ptc-miRf12269-akr:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 111 cagccaaggatgacttgccg 92
>52526_ptc-miRf10704-akr:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 110 cagccaaggatgacttgccg 91
>52491_ptc-miRf10669-akr:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 cggcaagttgttcttggcta 91
||||||||||||||||||||
Sbjct: 86 cggcaagttgttcttggcta 105
>51683_ptc-miR169z:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 72 cggcaagttgttcttggcta 91
||||||||||||||||||||
Sbjct: 91 cggcaagttgttcttggcta 110
>51676_ptc-miR169s:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 12 cagccaaggatgacttgccg 31
>51665_ptc-miR169h:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccg 30
>51664_ptc-miR169g:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccg 30
>51663_ptc-miR169f:pmrd
Length = 239
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccg 30
>51662_ptc-miR169e:pmrd
Length = 166
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccg 30
>51661_ptc-miR169d:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccg 30
>51339_phy-miR169:pmrd
Length = 146
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 15 cagccaaggatgacttgccg 34
>50631_osa-miRf11416-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 123 cagccaaggatgacttgccg 104
>50630_osa-miRf11415-akr:pmrd
Length = 147
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 22 cagccaaggatgacttgccg 41
>49845_osa-miRf10630-akr:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 103 cagccaaggatgacttgccg 84
>48891_osa-miR169p:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 116 cagccaaggatgacttgccg 97
>48878_osa-miR169c:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccg 30
>48877_osa-miR169b:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccg 30
>48639_gso-miR169a:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>48564_gma-miR169p:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 1 cagccaaggatgacttgccg 20
>48563_gma-miR169c:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccga 21
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccga 31
>48561_gma-miR169a:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 21 cagccaaggatgacttgccg 40
>47961_ath-miRf10861-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 5 cagccaaggatgacttgccg 24
>47674_ath-miRf10574-akr:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 112 cagccaaggatgacttgccg 93
>46962_ath-miR169c:pmrd
Length = 411
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 113 cagccaaggatgacttgccg 132
>46961_ath-miR169b:pmrd
Length = 181
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 43 cagccaaggatgacttgccg 62
>46875_aqc-miR169c:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagccaaggatgacttgccg 20
||||||||||||||||||||
Sbjct: 5 cagccaaggatgacttgccg 24
>46859_ama-miR169:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgccga 21
||||||||||||||||||||
Sbjct: 15 agccaaggatgacttgccga 34
