miRNEST 2.0, an integrative microRNA resource :: BLAST
>42766_zma-MIR171f:mirbase
Length = 155
Score = 81.8 bits (41), Expect = 1e-16
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 121 ttgattgagccgtgccaatatcacaaccttctctagcctat 161
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatcacaaccttctctagcctat 154
Score = 69.9 bits (35), Expect = 6e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 4 gttggctgagagagtgcgatgttggcatggttcaatcaa 42
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 7 gttggctgagagagtgcgatgttggcatggctcaatcaa 45
>42769_zma-MIR171i:mirbase
Length = 104
Score = 79.8 bits (40), Expect = 6e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 2 tggttggctgagagagtgcgatgttggcatggttcaatcaaatc 45
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2 tggttggctgagagagtgcgatgttggcacggttcaatcaaatc 45
Score = 79.8 bits (40), Expect = 6e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 121 ttgattgagccgtgccaatatcacaaccttctctagccta 160
||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatcacaaccttctctagccta 103
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 6 tggctgagagagtgcgatgttggcatggttcaatcaaatc 45
|||||| |||||||||||||||||| ||||||||||||||
Sbjct: 17 tggctgggagagtgcgatgttggcacggttcaatcaaatc 56
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 122 tgattgagccgtgccaatatcacaaccttct 152
||||||||||||||||||||| ||| |||||
Sbjct: 114 tgattgagccgtgccaatatcgcaagcttct 144
>41986_osa-MIR171f:mirbase
Length = 127
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 13 gagagtgcgatgttggcatggttcaatcaaa 43
|||||||||||||||||||||||||||||||
Sbjct: 3 gagagtgcgatgttggcatggttcaatcaaa 33
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 122 tgattgagccgtgccaatatcacaa 146
|||||||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatcacaa 121
>41874_far-MIR171:mirbase
Length = 130
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 15 gagtgcgatgttggcatggttcaatcaa 42
||||||||||||||||||||||||||||
Sbjct: 1 gagtgcgatgttggcatggttcaatcaa 28
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 122 tgattgagccgtgccaatatcacaaccttc 151
||||||||||||||||||||| ||| ||||
Sbjct: 90 tgattgagccgtgccaatatcgcaagcttc 119
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||||
Sbjct: 63 tgtttgattgagccgtgccaatatcac 89
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||||
Sbjct: 67 tgtttgattgagccgtgccaatatcac 93
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||||
Sbjct: 68 tgtttgattgagccgtgccaatatcac 94
>40360_rco-MIR171b:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||||
Sbjct: 59 tgtttgattgagccgtgccaatatcac 85
>40318_bra-MIR171a:mirbase
Length = 85
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||||
Sbjct: 58 tgtttgattgagccgtgccaatatcac 84
>40305_bol-MIR171a:mirbase
Length = 96
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||||
Sbjct: 64 tgtttgattgagccgtgccaatatcac 90
>40289_bna-MIR171e:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||||
Sbjct: 63 tgtttgattgagccgtgccaatatcac 89
>40288_bna-MIR171d:mirbase
Length = 96
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||||
Sbjct: 64 tgtttgattgagccgtgccaatatcac 90
>39851_aly-MIR171c:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||||
Sbjct: 70 tgtttgattgagccgtgccaatatcac 96
>40457_gma-MIR171c:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatcaca 145
||||||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatcaca 95
>42762_zma-MIR171b:mirbase
Length = 85
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcac 84
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcac 84
>41983_osa-MIR171c:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatcac 91
>41982_osa-MIR171b:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatcac 92
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatcac 86
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatcac 92
>41216_crt-MIR171:mirbase
Length = 201
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatatcac 183
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 118 tgtttgattgagccgtgccaatatc 142
|||||||||||||||||||||||||
Sbjct: 25 tgtttgattgagccgtgccaatatc 1
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatc 142
|||||||||||||||||||||||||
Sbjct: 76 tgtttgattgagccgtgccaatatc 100
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatcac 99
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatatcac 99
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatcac 89
>40361_rco-MIR171c:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 gatgttggcatggttcaatcaaatc 45
|||||||||||||||||||||||||
Sbjct: 4 gatgttggcatggttcaatcaaatc 28
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 122 tgattgagccgtgccaatatc 142
|||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatc 82
>40359_rco-MIR171a:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatcac 86
>40062_ath-MIR171c:mirbase
Length = 116
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatcac 144
|||||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatcac 109
>41538_sly-MIR171a:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 gtttgattgagccgtgccaatatc 142
||||||||||||||||||||||||
Sbjct: 84 gtttgattgagccgtgccaatatc 107
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 122 tgattgagccgtgccaatatcaca 145
||||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcaca 94
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 122 tgattgagccgtgccaatatcaca 145
||||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcaca 94
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 122 tgattgagccgtgccaatatcaca 145
||||||||||||||||||||||||
Sbjct: 75 tgattgagccgtgccaatatcaca 98
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 gtttgattgagccgtgccaatatc 142
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 gtttgattgagccgtgccaatatc 142
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>42770_zma-MIR171j:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 122 tgattgagccgtgccaatatcac 144
|||||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatcac 112
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 122 tgattgagccgtgccaatatcac 144
|||||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatcac 115
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatc 142
|||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatatc 120
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatc 142
|||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatatc 104
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 122 tgattgagccgtgccaatatcac 144
|||||||||||||||||||||||
Sbjct: 55 tgattgagccgtgccaatatcac 77
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatc 142
|||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatatc 141
>40364_rco-MIR171f:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatc 142
|||||||||||||||||||||||
Sbjct: 84 tttgattgagccgtgccaatatc 106
>40362_rco-MIR171d:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatatc 142
|||||||||||||||||||||||
Sbjct: 97 tttgattgagccgtgccaatatc 119
>40321_bra-MIR171d:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||| ||||||||||||||||||||||
Sbjct: 66 tgttcgattgagccgtgccaatatcac 92
>40320_bra-MIR171c:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||| ||||||||||||||||||||||
Sbjct: 60 tgttcgattgagccgtgccaatatcac 86
>40319_bra-MIR171b:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||| ||||||||||||||||||||||
Sbjct: 67 tgttcgattgagccgtgccaatatcac 93
>40287_bna-MIR171c:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||| ||||||||||||||||||||||
Sbjct: 60 tgttcgattgagccgtgccaatatcac 86
>40286_bna-MIR171b:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||| ||||||||||||||||||||||
Sbjct: 66 tgttcgattgagccgtgccaatatcac 92
>40285_bna-MIR171a:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||| ||||||||||||||||||||||
Sbjct: 67 tgttcgattgagccgtgccaatatcac 93
>40061_ath-MIR171b:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||| ||||||||||||||||||||||
Sbjct: 71 tgttcgattgagccgtgccaatatcac 97
>39850_aly-MIR171b:mirbase
Length = 137
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 118 tgtttgattgagccgtgccaatatcac 144
|||| ||||||||||||||||||||||
Sbjct: 82 tgttcgattgagccgtgccaatatcac 108
>42641_tae-MIR171b:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 123 gattgagccgtgccaatatcac 144
||||||||||||||||||||||
Sbjct: 90 gattgagccgtgccaatatcac 111
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 122 tgattgagccgtgccaatatca 143
||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatca 90
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 122 tgattgagccgtgccaatatca 143
||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatca 89
>40697_mtr-MIR171c:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 tttgattgagccgtgccaatat 141
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
>39736_smo-MIR171a:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 123 gattgagccgtgccaatatcac 144
||||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatcac 124
