miRNEST 2.0, an integrative microRNA resource :: BLAST
>42774_zma-MIR171n:mirbase
Length = 78
Score = 129 bits (65), Expect = 3e-31
Identities = 75/77 (97%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 tattggtgaggttcaatccgatgataggttttacaaacagctgtaaaatcagtatctgat 60
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 2 tattggtgaggttcaatccgatgttaggttttacaaa-agctgtaaaatcagtatctgat 60
Query: 61 tgagccgcgccaatatc 77
|||||||||||||||||
Sbjct: 61 tgagccgcgccaatatc 77
>41981_osa-MIR171a:mirbase
Length = 96
Score = 105 bits (53), Expect = 4e-24
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 tattggtgaggttcaatccgatgataggttttacaaacagctgtaaaatcagtatctgat 60
||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 12 tattggtgaggttcaatccgatgattggttttacag-cagtggtaaaatcagtatctgat 70
Query: 61 tgagccgcgccaatatc 77
|||||||||||||||||
Sbjct: 71 tgagccgcgccaatatc 87
>40322_bra-MIR171e:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 tatctgattgagccgcgccaatatc 77
|||||||||||||||||||||||||
Sbjct: 80 tatctgattgagccgcgccaatatc 104
>40291_bna-MIR171g:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 tatctgattgagccgcgccaatatc 77
|||||||||||||||||||||||||
Sbjct: 54 tatctgattgagccgcgccaatatc 78
>40290_bna-MIR171f:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 tatctgattgagccgcgccaatatc 77
|||||||||||||||||||||||||
Sbjct: 80 tatctgattgagccgcgccaatatc 104
>40060_ath-MIR171a:mirbase
Length = 123
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 tatctgattgagccgcgccaatatc 77
|||||||||||||||||||||||||
Sbjct: 84 tatctgattgagccgcgccaatatc 108
>39849_aly-MIR171a:mirbase
Length = 198
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 tatctgattgagccgcgccaatatc 77
|||||||||||||||||||||||||
Sbjct: 126 tatctgattgagccgcgccaatatc 150
>42761_zma-MIR171a:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 50 cagtatctgattgagccgcgccaatatc 77
|||| |||||||||||||||||||||||
Sbjct: 72 cagtgtctgattgagccgcgccaatatc 99
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 tctgattgagccgcgccaatatc 77
|||||||||||||||||||||||
Sbjct: 68 tctgattgagccgcgccaatatc 90
>42555_sbi-MIR171j:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 ctgattgagccgcgccaatatc 77
||||||||||||||||||||||
Sbjct: 82 ctgattgagccgcgccaatatc 103
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgcgccaatatc 77
|||||||||||||||||||||
Sbjct: 50 tgattgagccgcgccaatatc 70
>41540_sly-MIR171c:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgcgccaatatc 77
|||||||||||||||||||||
Sbjct: 78 tgattgagccgcgccaatatc 98
>41231_csi-MIR171a:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgcgccaatatc 77
|||||||||||||||||||||
Sbjct: 67 tgattgagccgcgccaatatc 87
>41211_ccl-MIR171:mirbase
Length = 321
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgcgccaatatc 77
|||||||||||||||||||||
Sbjct: 122 tgattgagccgcgccaatatc 142
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 tgattgagccgcgccaatatc 77
|||||||||||||||||||||
Sbjct: 79 tgattgagccgcgccaatatc 99
>41874_far-MIR171:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 atctgattgagccgcgccaatatc 77
|||||||||||||| |||||||||
Sbjct: 87 atctgattgagccgtgccaatatc 110
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 atctgattgagccgcgccaatatc 77
|||||||||||||| |||||||||
Sbjct: 111 atctgattgagccgtgccaatatc 134
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 atctgattgagccgcgccaatatc 77
|||||||||||||| |||||||||
Sbjct: 66 atctgattgagccgtgccaatatc 89
>41627_vvi-MIR171f:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 gattgagccgcgccaatatc 77
||||||||||||||||||||
Sbjct: 71 gattgagccgcgccaatatc 90
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 atctgattgagccgcgccaatatc 77
|||||||||||||| |||||||||
Sbjct: 65 atctgattgagccgtgccaatatc 88
>41541_sly-MIR171d:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 gattgagccgcgccaatatc 77
||||||||||||||||||||
Sbjct: 73 gattgagccgcgccaatatc 92
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ttggtgaggttcaatccga 21
|||||||||||||||||||
Sbjct: 16 ttggtgaggttcaatccga 34
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 gattgagccgcgccaatatc 77
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 atctgattgagccgcgccaatatc 77
|||||||||||||| |||||||||
Sbjct: 68 atctgattgagccgtgccaatatc 91
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 atctgattgagccgcgccaatatc 77
|||||||||||||| |||||||||
Sbjct: 68 atctgattgagccgtgccaatatc 91
>41385_ptc-MIR171e:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 atctgattgagccgcgccaatatc 77
|||||||||||||| |||||||||
Sbjct: 62 atctgattgagccgtgccaatatc 85
>41384_ptc-MIR171d:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 gattgagccgcgccaatatc 77
||||||||||||||||||||
Sbjct: 72 gattgagccgcgccaatatc 91
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ttggtgaggttcaatccga 21
|||||||||||||||||||
Sbjct: 15 ttggtgaggttcaatccga 33
>41383_ptc-MIR171c:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 gattgagccgcgccaatatc 77
||||||||||||||||||||
Sbjct: 76 gattgagccgcgccaatatc 95
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ttggtgaggttcaatccga 21
|||||||||||||||||||
Sbjct: 15 ttggtgaggttcaatccga 33
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 atctgattgagccgcgccaatatc 77
|||||||||||||| |||||||||
Sbjct: 52 atctgattgagccgtgccaatatc 75
>41118_tcc-MIR171c:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 gattgagccgcgccaatatc 77
||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatc 103
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ttggtgaggttcaatccga 21
|||||||||||||||||||
Sbjct: 23 ttggtgaggttcaatccga 41
>41117_tcc-MIR171b:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 gattgagccgcgccaatatc 77
||||||||||||||||||||
Sbjct: 81 gattgagccgcgccaatatc 100
>40699_mtr-MIR171e:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 gattgagccgcgccaatatc 77
||||||||||||||||||||
Sbjct: 69 gattgagccgcgccaatatc 88
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ttggtgaggttcaatccga 21
|||||||||||||||||||
Sbjct: 10 ttggtgaggttcaatccga 28
>40365_rco-MIR171g:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 gattgagccgcgccaatatc 77
||||||||||||||||||||
Sbjct: 65 gattgagccgcgccaatatc 84
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 ttggtgaggttcaatccga 21
|||||||||||||||||||
Sbjct: 8 ttggtgaggttcaatccga 26
>40363_rco-MIR171e:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 atctgattgagccgcgccaatatc 77
|||||||||||||| |||||||||
Sbjct: 56 atctgattgagccgtgccaatatc 79
>40361_rco-MIR171c:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 54 atctgattgagccgcgccaatatc 77
|||||||||||||| |||||||||
Sbjct: 59 atctgattgagccgtgccaatatc 82
>39479_ppt-MIR171b:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 gattgagccgcgccaatatc 77
||||||||||||||||||||
Sbjct: 65 gattgagccgcgccaatatc 84
>39478_ppt-MIR171a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 gattgagccgcgccaatatc 77
||||||||||||||||||||
Sbjct: 64 gattgagccgcgccaatatc 83
>42770_zma-MIR171j:mirbase
Length = 129
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tctgattgagccgcgccaatatc 77
||||||||||||| |||||||||
Sbjct: 88 tctgattgagccgtgccaatatc 110
>42765_zma-MIR171e:mirbase
Length = 126
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tctgattgagccgcgccaatatc 77
||||||||||||| |||||||||
Sbjct: 85 tctgattgagccgtgccaatatc 107
>42764_zma-MIR171d:mirbase
Length = 121
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tctgattgagccgcgccaatatc 77
||||||||||||| |||||||||
Sbjct: 80 tctgattgagccgtgccaatatc 102
>42762_zma-MIR171b:mirbase
Length = 85
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 55 tctgattgagccgcgccaatatc 77
||||||||| |||||||||||||
Sbjct: 26 tctgattgaaccgcgccaatatc 4
>42640_tae-MIR171a:mirbase
Length = 130
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tctgattgagccgcgccaatatc 77
||||||||||||| |||||||||
Sbjct: 87 tctgattgagccgtgccaatatc 109
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 55 tctgattgagccgcgccaatatc 77
||||||||| |||||||||||||
Sbjct: 26 tctgattgaaccgcgccaatatc 4
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tctgattgagccgcgccaatatc 77
||||||||||||| |||||||||
Sbjct: 66 tctgattgagccgtgccaatatc 88
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tctgattgagccgcgccaatatc 77
||||||||||||| |||||||||
Sbjct: 112 tctgattgagccgtgccaatatc 134
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tctgattgagccgcgccaatatc 77
||||||||||||| |||||||||
Sbjct: 91 tctgattgagccgtgccaatatc 113
>41986_osa-MIR171f:mirbase
Length = 127
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tctgattgagccgcgccaatatc 77
||||||||||||| |||||||||
Sbjct: 95 tctgattgagccgtgccaatatc 117
>41985_osa-MIR171e:mirbase
Length = 119
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tctgattgagccgcgccaatatc 77
||||||||||||| |||||||||
Sbjct: 87 tctgattgagccgtgccaatatc 109
>41984_osa-MIR171d:mirbase
Length = 135
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tctgattgagccgcgccaatatc 77
||||||||||||| |||||||||
Sbjct: 103 tctgattgagccgtgccaatatc 125
>41890_hvu-MIR171:mirbase
Length = 173
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tctgattgagccgcgccaatatc 77
||||||||||||| |||||||||
Sbjct: 110 tctgattgagccgtgccaatatc 132
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tctgattgagccgcgccaatatc 77
||||||||||||| |||||||||
Sbjct: 99 tctgattgagccgtgccaatatc 121
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tctgattgagccgcgccaatatc 77
||||||||||||| |||||||||
Sbjct: 93 tctgattgagccgtgccaatatc 115
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 tctgattgagccgcgccaatatc 77
||||||||||||| |||||||||
Sbjct: 73 tctgattgagccgtgccaatatc 95
>39739_smo-MIR171d:mirbase
Length = 103
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 59 attgagccgcgccaatatc 77
|||||||||||||||||||
Sbjct: 71 attgagccgcgccaatatc 89
