miRNEST 2.0, an integrative microRNA resource :: BLAST
>42773_zma-MIR171m:mirbase
Length = 82
Score = 119 bits (60), Expect = 3e-28
Identities = 77/82 (93%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 2 gtattggcgcgcctcaatccgaaggcgtggctgat---ttggcatggcagccatgttctt 58
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 1 gtattggcgcgcctcaatccgaaggcgtggctgatagattggcgcggcagccatgttctt 60
Query: 59 ggattgagccgcgtcaatatct 80
||||||||||||||||||||||
Sbjct: 61 ggattgagccgcgtcaatatct 82
>42772_zma-MIR171l:mirbase
Length = 78
Score = 109 bits (55), Expect = 3e-25
Identities = 74/79 (93%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 2 gtattggcgcgcctcaatccgaaggcgtggctgatttggcatggcagccatgttcttgga 61
||||||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||
Sbjct: 1 gtattggcgtgcctcaatccgaaggcgtggctgact-ggcgcggcagccatgttcttgga 59
Query: 62 ttgagccgcgtcaatatct 80
|||||||||||||||||||
Sbjct: 60 ttgagccgcgtcaatatct 78
>41989_osa-MIR171i:mirbase
Length = 120
Score = 60.0 bits (30), Expect = 2e-10
Identities = 37/38 (97%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 45 gcagccatgtt-cttggattgagccgcgtcaatatctc 81
||||||||||| ||||||||||||||||||||||||||
Sbjct: 73 gcagccatgtttcttggattgagccgcgtcaatatctc 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1 ggtattggcgcgcctcaatccgaaggcgtggctgatt 37
|||||||||| |||||||||||||||| |||||||||
Sbjct: 9 ggtattggcgtgcctcaatccgaaggcatggctgatt 45
>41623_vvi-MIR171b:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 47 agccatgttcttggattgagccgcgtcaatatctc 81
|||||||| || ||||||||||||||||||||||
Sbjct: 57 agccatgtgatttgattgagccgcgtcaatatctc 91
>40696_mtr-MIR171b:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 46 cagccatgttcttggattgagccgcgtcaatatct 80
||||||||| || |||||||||||||||||||||
Sbjct: 56 cagccatgtagtttgattgagccgcgtcaatatct 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 ggtattggcgcgcctcaat 19
|||||||||||||||||||
Sbjct: 6 ggtattggcgcgcctcaat 24
>41281_ctr-MIR171:mirbase
Length = 371
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 attgagccgcgtcaatatctc 81
|||||||||||||||||||||
Sbjct: 103 attgagccgcgtcaatatctc 123
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 ggtattggcgcgcctcaat 19
|||||||||||||||||||
Sbjct: 42 ggtattggcgcgcctcaat 60
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 57 ttggattgagccgcgtcaatatc 79
||||||||||||||| |||||||
Sbjct: 56 ttggattgagccgcgccaatatc 78
