miRNEST 2.0, an integrative microRNA resource :: BLAST
>41774_bdi-MIR393a:mirbase
Length = 159
Score = 81.8 bits (41), Expect = 1e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 95 cgacggatcatgcgatccttttggaggcttcctctagacattact 139
||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 102 cgacggatcatgcgatccttttggaggcttcctctagccattact 146
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 13 ggaagcatccaaagggatcgcattgatcc 41
|||||||||||||||||||||||||||||
Sbjct: 29 ggaagcatccaaagggatcgcattgatcc 57
>41997_osa-MIR393:mirbase
Length = 115
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 96 gacggatcatgcgatccttttggaggcttcctct 129
||||||||||||||||||||||||||||||||||
Sbjct: 82 gacggatcatgcgatccttttggaggcttcctct 115
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 13 ggaagcatccaaagggatcgcattgatcc 41
|||||||||||||||||||||||||||||
Sbjct: 4 ggaagcatccaaagggatcgcattgatcc 32
>42787_zma-MIR393b:mirbase
Length = 108
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 20 tccaaagggatcgcattgatccgtcactccttccatt 56
|||||||||||||||||||||| ||| ||||||||||
Sbjct: 2 tccaaagggatcgcattgatccatcattccttccatt 38
>41642_vvi-MIR393b:mirbase
Length = 83
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 10 ggaggaagcatccaaagggatcgcattgatcc 41
|||||| |||||||||||||||||||||||||
Sbjct: 1 ggaggaggcatccaaagggatcgcattgatcc 32
>40470_gma-MIR393:mirbase
Length = 120
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 10 ggaggaagcatccaaagggatcgcattgatcc 41
|||||| |||||||||||||||||||||||||
Sbjct: 1 ggaggaggcatccaaagggatcgcattgatcc 32
>41418_ptc-MIR393b:mirbase
Length = 84
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 gaggaagcatccaaagggatcgcattgatcc 41
||||| |||||||||||||||||||||||||
Sbjct: 2 gaggaggcatccaaagggatcgcattgatcc 32
>41417_ptc-MIR393a:mirbase
Length = 85
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 gaggaagcatccaaagggatcgcattgatcc 41
||||| |||||||||||||||||||||||||
Sbjct: 2 gaggaggcatccaaagggatcgcattgatcc 32
>41132_tcc-MIR393a:mirbase
Length = 118
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 gaggaagcatccaaagggatcgcattgatcc 41
||||| |||||||||||||||||||||||||
Sbjct: 12 gaggaggcatccaaagggatcgcattgatcc 42
>40706_mtr-MIR393:mirbase
Length = 135
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 gaggaagcatccaaagggatcgcattgatcc 41
||||| |||||||||||||||||||||||||
Sbjct: 12 gaggaggcatccaaagggatcgcattgatcc 42
>40075_ath-MIR393a:mirbase
Length = 133
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 gaggaagcatccaaagggatcgcattgatcc 41
||||||| |||||||||||||||||||||||
Sbjct: 2 gaggaaggatccaaagggatcgcattgatcc 32
>39866_aly-MIR393b:mirbase
Length = 169
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 15 aagcatccaaagggatcgcattgatcc 41
|||||||||||||||||||||||||||
Sbjct: 13 aagcatccaaagggatcgcattgatcc 39
>39865_aly-MIR393a:mirbase
Length = 147
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 gaggaagcatccaaagggatcgcattgatcc 41
||||||| |||||||||||||||||||||||
Sbjct: 9 gaggaaggatccaaagggatcgcattgatcc 39
>40707_mtr-MIR393b:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 17 gcatccaaagggatcgcattgatcc 41
|||||||||||||||||||||||||
Sbjct: 3 gcatccaaagggatcgcattgatcc 27
>41238_csi-MIR393:mirbase
Length = 145
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 atccaaagggatcgcattgatcc 41
|||||||||||||||||||||||
Sbjct: 20 atccaaagggatcgcattgatcc 42
>40076_ath-MIR393b:mirbase
Length = 160
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 atccaaagggatcgcattgatcc 41
|||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcc 32
>41641_vvi-MIR393a:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tccaaagggatcgcattgatcc 41
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>40295_bna-MIR393:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tccaaagggatcgcattgatcc 41
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcc 22
>42788_zma-MIR393c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tccaaagggatcgcattgatc 40
|||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatc 22
>42786_zma-MIR393a:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tccaaagggatcgcattgatc 40
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>42567_sbi-MIR393b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tccaaagggatcgcattgatc 40
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>41999_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tccaaagggatcgcattgatc 40
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>41998_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tccaaagggatcgcattgatc 40
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>41775_bdi-MIR393b:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tccaaagggatcgcattgatc 40
|||||||||||||||||||||
Sbjct: 42 tccaaagggatcgcattgatc 62
>41420_ptc-MIR393d:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tccaaagggatcgcattgatc 40
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41419_ptc-MIR393c:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tccaaagggatcgcattgatc 40
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41133_tcc-MIR393b:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tccaaagggatcgcattgatc 40
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>41054_ghr-MIR393:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tccaaagggatcgcattgatc 40
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>40373_rco-MIR393:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tccaaagggatcgcattgatc 40
|||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatc 26
