miRNEST 2.0, an integrative microRNA resource :: BLAST
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 5 agtccatgccatgcctttccacagctttcttgaact 40
|||||||||||| |||||||||||||||||||||||
Sbjct: 16 agtccatgccattcctttccacagctttcttgaact 51
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 125 ggtcaagaaagctgtgggaagaaatgacataacaagga 162
|||||||||||||||||||||||||| |||||| ||||
Sbjct: 143 ggtcaagaaagctgtgggaagaaatggcataaccagga 180
>42028_osa-MIR396c:mirbase
Length = 141
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 11 tgccatgcctttccacagctttcttgaact 40
||||||||||||||||||||||||||||||
Sbjct: 1 tgccatgcctttccacagctttcttgaact 30
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 120 aagaaggtcaagaaagctgtgggaagaaatg 150
|||| ||||||||||||||||||||||||||
Sbjct: 108 aagagggtcaagaaagctgtgggaagaaatg 138
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 tgccatgcctttccacagctttcttgaact 40
|||||||| |||||||||||||||||||||
Sbjct: 4 tgccatgcttttccacagctttcttgaact 33
>42812_zma-MIR396f:mirbase
Length = 117
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 122 gaaggtcaagaaagctgtgggaaga 146
|||||||||||||||||||||||||
Sbjct: 93 gaaggtcaagaaagctgtgggaaga 117
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tttccacagctttcttgaact 40
|||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaact 21
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 12 gccatgcctttccacagctttcttgaact 40
||||||| |||||||||||||||||||||
Sbjct: 12 gccatgcttttccacagctttcttgaact 40
>42811_zma-MIR396e:mirbase
Length = 166
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 120 aagaaggtcaagaaagctgtgggaaga 146
||||||||||||||||| |||||||||
Sbjct: 140 aagaaggtcaagaaagccgtgggaaga 166
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tttccacagctttcttgaact 40
|||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaact 21
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 catgcctttccacagctttcttgaact 40
||||| |||||||||||||||||||||
Sbjct: 7 catgcttttccacagctttcttgaact 33
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 catgcctttccacagctttcttgaact 40
||||| |||||||||||||||||||||
Sbjct: 4 catgcttttccacagctttcttgaact 30
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 118 caaagaaggtcaagaaagctgtgg 141
|||||||| |||||||||||||||
Sbjct: 36 caaagaagttcaagaaagctgtgg 13
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 catgcctttccacagctttcttgaact 40
||||| |||||||||||||||||||||
Sbjct: 4 catgcttttccacagctttcttgaact 30
>41212_ccl-MIR396:mirbase
Length = 277
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 catgcctttccacagctttcttgaact 40
||||| |||||||||||||||||||||
Sbjct: 136 catgcttttccacagctttcttgaact 162
>40476_gma-MIR396d:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 catgcctttccacagctttcttgaact 40
||||| |||||||||||||||||||||
Sbjct: 4 catgcttttccacagctttcttgaact 30
>40474_gma-MIR396b:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 catgcctttccacagctttcttgaact 40
||||| |||||||||||||||||||||
Sbjct: 14 catgcttttccacagctttcttgaact 40
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tgccatgcctttccacagctttcttgaact 40
||||||| |||||||||||||||||||||
Sbjct: 1 tgccatgtttttccacagctttcttgaact 30
>41243_csi-MIR396c:mirbase
Length = 178
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 121 agaaggtcaagaaagctgtgggaagaaatg 150
||||| |||||||| |||||||||||||||
Sbjct: 144 agaagttcaagaaatctgtgggaagaaatg 173
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tttccacagctttcttgaact 40
|||||||||||||||||||||
Sbjct: 12 tttccacagctttcttgaact 32
>40475_gma-MIR396c:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 atgcctttccacagctttcttgaact 40
|||| |||||||||||||||||||||
Sbjct: 15 atgcttttccacagctttcttgaact 40
>39878_aly-MIR396b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 120 aagaaggtcaagaaagctgtgggaagaaatgaca 153
|||||| |||||||||||||||||| | ||||||
Sbjct: 130 aagaagctcaagaaagctgtgggaaaacatgaca 163
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tttccacagctttcttgaact 40
|||||||||||||||||||||
Sbjct: 31 tttccacagctttcttgaact 51
>41242_csi-MIR396b:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tttccacagctttcttgaact 40
|||||||||||||||||||||
Sbjct: 19 tttccacagctttcttgaact 39
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tttccacagctttcttgaact 40
|||||||||||||||||||||
Sbjct: 20 tttccacagctttcttgaact 40
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tttccacagctttcttgaact 40
|||||||||||||||||||||
Sbjct: 5 tttccacagctttcttgaact 25
>40379_rco-MIR396:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tttccacagctttcttgaact 40
|||||||||||||||||||||
Sbjct: 5 tttccacagctttcttgaact 25
>40086_ath-MIR396b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tttccacagctttcttgaact 40
|||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaact 30
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 122 gaaggtcaagaaagctgtgggaagaaatgaca 153
|||| |||||||||||||||||| | ||||||
Sbjct: 104 gaagctcaagaaagctgtgggaaaacatgaca 135
>39426_pta-MIR396:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tttccacagctttcttgaact 40
|||||||||||||||||||||
Sbjct: 16 tttccacagctttcttgaact 36
>39379_pab-MIR396a:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 gccatgcctttccacagctttcttgaact 40
||||||| ||||||||||||||||||||
Sbjct: 7 gccatgctcttccacagctttcttgaact 35
>42814_zma-MIR396h:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaact 79
>42813_zma-MIR396g:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaact 92
>42808_zma-MIR396b:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42807_zma-MIR396a:mirbase
Length = 137
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42472_ssp-MIR396:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>42461_sof-MIR396:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42027_osa-MIR396b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>42026_osa-MIR396a:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41241_csi-MIR396a:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40646_lja-MIR396:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
>40477_gma-MIR396e:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 7 ttccacagctttcttgaact 26
>40473_gma-MIR396a:mirbase
Length = 140
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40296_bna-MIR396a:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>40085_ath-MIR396a:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39877_aly-MIR396a:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 24 ttccacagctttcttgaact 43
