miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54651_sof-miR437:pmrd
Length = 149
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 152 atcaaagttagagaagtttgactt 175
||||||||||||||||||||||||
Sbjct: 125 atcaaagttagagaagtttgactt 148
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 152 atcaaagttagagaagtttgactt 175
|||||||||||||| |||||||||
Sbjct: 25 atcaaagttagagaggtttgactt 2
>55112_zma-miR437f:pmrd
Length = 342
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 24 tcaaagttagagaagtttgactt 2
>55108_zma-miR437b:pmrd
Length = 168
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 145 tcaaagttagagaagtttgactt 167
>55107_zma-miR437a:pmrd
Length = 342
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 319 tcaaagttagagaagtttgactt 341
>54516_sbi-miR437t:pmrd
Length = 170
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 148 tcaaagttagagaagtttgactt 170
>54515_sbi-miR437s:pmrd
Length = 176
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 152 tcaaagttagagaagtttgactt 174
>54512_sbi-miR437p:pmrd
Length = 188
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 164 tcaaagttagagaagtttgactt 186
>54511_sbi-miR437o:pmrd
Length = 175
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 151 tcaaagttagagaagtttgactt 173
>54507_sbi-miR437k:pmrd
Length = 172
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 148 tcaaagttagagaagtttgactt 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 153 tcaaagttagagaagtttgac 173
|||||||||||||||||||||
Sbjct: 23 tcaaagttagagaagtttgac 3
>54506_sbi-miR437j:pmrd
Length = 172
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 150 tcaaagttagagaagtttgactt 172
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 153 tcaaagttagagaagtttgac 173
|||||||||||||||||||||
Sbjct: 21 tcaaagttagagaagtttgac 1
>54505_sbi-miR437i:pmrd
Length = 170
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 148 tcaaagttagagaagtttgactt 170
>54504_sbi-miR437g:pmrd
Length = 176
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 152 tcaaagttagagaagtttgactt 174
>54503_sbi-miR437f:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 150 tcaaagttagagaagtttgactt 172
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 153 tcaaagttagagaagtttgact 174
||||||||||||||||||||||
Sbjct: 22 tcaaagttagagaagtttgact 1
>54502_sbi-miR437e:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 79 tcaaagttagagaagtttgactt 101
>54500_sbi-miR437b:pmrd
Length = 171
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 149 tcaaagttagagaagtttgactt 171
>48988_osa-miR437:pmrd
Length = 213
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 153 tcaaagttagagaagtttgactt 175
>48987_osa-miR437:pmrd
Length = 213
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 153 tcaaagttagagaagtttgactt 175
>48986_osa-miR437:pmrd
Length = 213
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgactt 175
|||||||||||||||||||||||
Sbjct: 153 tcaaagttagagaagtttgactt 175
>54518_sbi-miR437v:pmrd
Length = 114
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 154 caaagttagagaagtttgactt 175
||||||||||||||||||||||
Sbjct: 93 caaagttagagaagtttgactt 114
>54514_sbi-miR437r:pmrd
Length = 180
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 154 caaagttagagaagtttgactt 175
||||||||||||||||||||||
Sbjct: 157 caaagttagagaagtttgactt 178
>54508_sbi-miR437l:pmrd
Length = 170
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 154 caaagttagagaagtttgactt 175
||||||||||||||||||||||
Sbjct: 149 caaagttagagaagtttgactt 170
>55109_zma-miR437c:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 153 tcaaagttagagaagtttgac 173
|||||||||||||||||||||
Sbjct: 157 tcaaagttagagaagtttgac 177
>54519_sbi-miR437w:pmrd
Length = 173
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 155 aaagttagagaagtttgactt 175
|||||||||||||||||||||
Sbjct: 153 aaagttagagaagtttgactt 173
>54517_sbi-miR437u:pmrd
Length = 164
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 155 aaagttagagaagtttgactt 175
|||||||||||||||||||||
Sbjct: 144 aaagttagagaagtttgactt 164
>54513_sbi-miR437q:pmrd
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 155 aaagttagagaagtttgactt 175
|||||||||||||||||||||
Sbjct: 138 aaagttagagaagtttgactt 158
>54510_sbi-miR437n:pmrd
Length = 182
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 155 aaagttagagaagtttgactt 175
|||||||||||||||||||||
Sbjct: 160 aaagttagagaagtttgactt 180
>54509_sbi-miR437m:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 155 aaagttagagaagtttgactt 175
|||||||||||||||||||||
Sbjct: 152 aaagttagagaagtttgactt 172
>54501_sbi-miR437d:pmrd
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 155 aaagttagagaagtttgactt 175
|||||||||||||||||||||
Sbjct: 114 aaagttagagaagtttgactt 134
>55113_zma-miR437g:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 155 aaagttagagaagtttgact 174
||||||||||||||||||||
Sbjct: 154 aaagttagagaagtttgact 173
>55110_zma-miR437d:pmrd
Length = 179
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 156 aagttagagaagtttgactt 175
||||||||||||||||||||
Sbjct: 156 aagttagagaagtttgactt 175
