miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45607_miR437:micropc
          Length = 177

 Score =  109 bits (55), Expect = 7e-25
 Identities = 88/99 (88%)
 Strand = Plus / Plus

                                                                       
Query: 72  aattctccataaaatatgtcttattagtgcatttatttgaatttgtagaagttgacatat 131
           |||||||||| |||||| ||||| ||||||||||||| ||| ||||||| ||| | ||||
Sbjct: 79  aattctccatgaaatatttcttaatagtgcatttattcgaacttgtagatgttaatatat 138

                                                  
Query: 132 ttttctaaaaacttggtcaaagttagagaagtttgactt 170
           ||||||||||  |||||||||||||||||||| ||||||
Sbjct: 139 ttttctaaaactttggtcaaagttagagaagtctgactt 177



 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 3   gtcaaacttctctaactttgaccaaacttatagaaaaata 42
           |||| ||||||||||||||||||||| || ||||||||||
Sbjct: 175 gtcagacttctctaactttgaccaaagttttagaaaaata 136




>46270_miR437:micropc
          Length = 175

 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                   
Query: 131 tttttctaaaaacttggtcaaagttagagaagtttgactt 170
           |||||||||||||||| |||||||||||||||||||||||
Sbjct: 136 tttttctaaaaacttgatcaaagttagagaagtttgactt 175



 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 130 atttttctaaaaacttggtcaaagttagagaagtttgactt 170
           ||||||||| ||||||| ||||||||||||| |||||||||
Sbjct: 41  atttttctataaacttgatcaaagttagagaggtttgactt 1



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 3   gtcaaacttctctaactttgaccaaacttatagaaaaa 40
           ||||||||||||||||||||| |||  || ||||||||
Sbjct: 173 gtcaaacttctctaactttgatcaagtttttagaaaaa 136




>46472_miR437:micropc
          Length = 180

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 128 atatttttctaaaaacttggtcaaagttagagaagtttgactt 170
           ||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 138 atatttttctacaaacttggttaaagttagagaagtttgactt 180



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 3   gtcaaacttctctaactttgaccaaacttatagaaaaata 42
           ||||||||||||||||||| |||||  || ||||||||||
Sbjct: 178 gtcaaacttctctaactttaaccaagtttgtagaaaaata 139



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 132 ttttctaaaaacttggtcaaagttagaga 160
           ||||||| |||||||||||||||| ||||
Sbjct: 39  ttttctataaacttggtcaaagttggaga 11



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 36/40 (90%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                  
Query: 11 tctctaactttgaccaaacttatagaaaaatacaccaaca 50
          |||| ||||||||||||  |||||| ||||||||||||||
Sbjct: 11 tctccaactttgaccaagtttatag-aaaatacaccaaca 49




>45012_miR437:micropc
          Length = 149

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 131 tttttctaaaaacttggtcaaagttagagaagtttgactt 170
           |||||||  ||||||| || ||||||||||||||||||||
Sbjct: 110 tttttctcgaaacttgatctaagttagagaagtttgactt 149