miRNEST 2.0, an integrative microRNA resource :: BLAST
>42475_ssp-MIR437a:mirbase
Length = 175
Score = 93.7 bits (47), Expect = 4e-20
Identities = 138/165 (83%), Gaps = 5/165 (3%)
Strand = Plus / Plus
Query: 11 tctaactttaaacaagttactagaaaaatgcaccaacatctagaatatcaaattagcttc 70
||||||||| | |||||| |||||||||||||||| ||||||||||||||| ||| | |
Sbjct: 13 tctaactttgatcaagtttatagaaaaatgcaccaaaatctagaatatcaaactagttcc 72
Query: 71 attaaattttccacgaa--atgtcttggtagtgtgtttattaaactagtatatgttaata 128
|||||||| |||| ||| || | ||| || || |||||| |||| ||| ||| |||||
Sbjct: 73 attaaattctccatgaaatatattttgataatgcatttattgaacttgtagatgataata 132
Query: 129 ta-attttctaaaaacttggtcaaaaagttagagaagtttgactt 172
|| ||||||||||||||| || |||||||||||||||||||||
Sbjct: 133 tattttttctaaaaacttgatc--aaagttagagaagtttgactt 175
>42614_sbi-MIR437o:mirbase
Length = 175
Score = 75.8 bits (38), Expect = 1e-14
Identities = 124/148 (83%), Gaps = 6/148 (4%)
Strand = Plus / Plus
Query: 31 tagaaaaatgcaccaacatctagaatatcaaattagcttcattaaattttccacgaa--a 88
||||||||||||||| | |||| || |||||||||| ||||||||||| || | ||| |
Sbjct: 30 tagaaaaatgcaccatcctctacaacatcaaattagtttcattaaattctctatgaaata 89
Query: 89 tgtcttggtagtgtgtttat-taaactagtatatgttaatata-attttctaaaaacttg 146
||||||||||||| ||||| | ||| ||| |||||||||| |||| |||||||||
Sbjct: 90 tgtcttggtagtgcatttatgtgaacctgtagctgttaatatattttttataaaaactta 149
Query: 147 gtcaaaaagttagagaagtttgacttag 174
||| |||||||||||||||||||||||
Sbjct: 150 gtc--aaagttagagaagtttgacttag 175
>42611_sbi-MIR437l:mirbase
Length = 170
Score = 69.9 bits (35), Expect = 6e-13
Identities = 53/58 (91%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 115 agtatatgttaatataattttctaaaaacttggtcaaaaagttagagaagtttgactt 172
|||| ||||||||||| |||||||||||||||| | |||||||||||||||||||||
Sbjct: 115 agtagatgttaatatatttttctaaaaacttggcc--aaagttagagaagtttgactt 170
>42610_sbi-MIR437k:mirbase
Length = 172
Score = 63.9 bits (32), Expect = 4e-11
Identities = 41/43 (95%), Gaps = 2/43 (4%)
Strand = Plus / Plus
Query: 132 ttttctaaaaacttggtcaaaaagttagagaagtttgacttag 174
||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 132 ttttctaaaaacttggtcaaa--gttagagaagtttgacttag 172
>42607_sbi-MIR437g:mirbase
Length = 176
Score = 60.0 bits (30), Expect = 6e-10
Identities = 42/45 (93%), Gaps = 2/45 (4%)
Strand = Plus / Plus
Query: 130 aattttctaaaaacttggtcaaaaagttagagaagtttgacttag 174
||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 134 aattttctataaacttggtcaaa--gttagagaagtttgacttag 176
>42602_sbi-MIR437b:mirbase
Length = 171
Score = 58.0 bits (29), Expect = 2e-09
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 1 gtcaaactcatctaactttaaacaagttactagaaaaatgcaccaacatctagaatatca 60
|||||||| ||||||||| | |||||| ||||||||||||||||||||| || ||||
Sbjct: 169 gtcaaacttctctaactttgaccaagtttatagaaaaatgcaccaacatctgaaacatca 110
Query: 61 aatta 65
|||||
Sbjct: 109 aatta 105
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/41 (92%), Gaps = 2/41 (4%)
Strand = Plus / Plus
Query: 132 ttttctaaaaacttggtcaaaaagttagagaagtttgactt 172
||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 133 ttttctataaacttggtcaaa--gttagagaagtttgactt 171
>42608_sbi-MIR437i:mirbase
Length = 170
Score = 56.0 bits (28), Expect = 9e-09
Identities = 46/51 (90%), Gaps = 2/51 (3%)
Strand = Plus / Minus
Query: 120 atgttaatataattttctaaaaacttggtcaaaaagttagagaagtttgac 170
|||||||||||| |||||| |||||||||| ||||||| |||||||||||
Sbjct: 49 atgttaatataactttctagaaacttggtc--aaagttaaagaagtttgac 1
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/41 (90%), Gaps = 2/41 (4%)
Strand = Plus / Plus
Query: 132 ttttctaaaaacttggtcaaaaagttagagaagtttgactt 172
||||||| |||||| |||||| ||||||||||||||||||
Sbjct: 132 ttttctataaactttgtcaaa--gttagagaagtttgactt 170
>42606_sbi-MIR437f:mirbase
Length = 174
Score = 56.0 bits (28), Expect = 9e-09
Identities = 40/43 (93%), Gaps = 2/43 (4%)
Strand = Plus / Plus
Query: 132 ttttctaaaaacttggtcaaaaagttagagaagtttgacttag 174
||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 134 ttttctataaacttggtcaaa--gttagagaagtttgacttag 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 152 aaagttagagaagtttgact 171
||||||||||||||||||||
Sbjct: 20 aaagttagagaagtttgact 1
>42605_sbi-MIR437e:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 9e-09
Identities = 43/47 (91%), Gaps = 2/47 (4%)
Strand = Plus / Plus
Query: 126 atataattttctaaaaacttggtcaaaaagttagagaagtttgactt 172
||||| |||||| |||||||||||||| ||||||||||||||||||
Sbjct: 57 atatatttttctgaaaacttggtcaaa--gttagagaagtttgactt 101
>42063_osa-MIR437:mirbase
Length = 213
Score = 56.0 bits (28), Expect = 9e-09
Identities = 40/43 (93%), Gaps = 2/43 (4%)
Strand = Plus / Plus
Query: 132 ttttctaaaaacttggtcaaaaagttagagaagtttgacttag 174
||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 137 ttttctataaacttggtcaaa--gttagagaagtttgacttag 177
>42620_sbi-MIR437u:mirbase
Length = 164
Score = 54.0 bits (27), Expect = 4e-08
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 1 gtcaaactcatctaactttaaacaagttactagaaaaatgcaccaacatctagaatatca 60
|||||||| ||||||||| | |||||| ||||||||| | |||| ||||| | ||||
Sbjct: 162 gtcaaacttctctaactttcaccaagtttatagaaaaatacgccaatatctatgacatca 103
Query: 61 aattagcttcattaaattttcca 83
|||||| ||||||||||| ||||
Sbjct: 102 aattagtttcattaaattctcca 80
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/41 (90%), Gaps = 2/41 (4%)
Strand = Plus / Plus
Query: 132 ttttctaaaaacttggtcaaaaagttagagaagtttgactt 172
||||||| ||||||||| ||| ||||||||||||||||||
Sbjct: 126 ttttctataaacttggtgaaa--gttagagaagtttgactt 164
>42613_sbi-MIR437n:mirbase
Length = 182
Score = 54.0 bits (27), Expect = 4e-08
Identities = 48/54 (88%), Gaps = 2/54 (3%)
Strand = Plus / Plus
Query: 120 atgttaatataattttctaaaaacttggtcaaaaagttagagaagtttgactta 173
|||||| |||| ||||||| ||||||||| ||| |||||||||||||||||||
Sbjct: 130 atgttagtatatttttctacaaacttggttaaa--gttagagaagtttgactta 181
>42477_ssp-MIR437c:mirbase
Length = 177
Score = 54.0 bits (27), Expect = 4e-08
Identities = 54/62 (87%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 111 aactagtatatgttaatataattttctaaaaacttggtcaaaaagttagagaagtttgac 170
|||| ||| ||||||||||| |||||||||| |||||| |||||||||||||| ||||
Sbjct: 118 aacttgtagatgttaatatatttttctaaaactttggtc--aaagttagagaagtctgac 175
Query: 171 tt 172
||
Sbjct: 176 tt 177
>42622_sbi-MIR437w:mirbase
Length = 173
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/41 (92%), Gaps = 2/41 (4%)
Strand = Plus / Plus
Query: 132 ttttctaaaaacttggtcaaaaagttagagaagtttgactt 172
||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 135 ttttctaaaaacttggtgaaa--gttagagaagtttgactt 173
Score = 40.1 bits (20), Expect = 5e-04
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 31 tagaaaaatgcaccaacatctagaatatcaaattagcttcattaaatt 78
|||||||||||| |||||| | || |||||||||| ||||||||||
Sbjct: 29 tagaaaaatgcatcaacatttccaacatcaaattagtatcattaaatt 76
>42621_sbi-MIR437v:mirbase
Length = 114
Score = 52.0 bits (26), Expect = 1e-07
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 1 gtcaaactcatctaactttaaacaagttactagaaaaatgcaccaacatctagaatatca 60
|||||||| ||||||||| |||||| |||||||||||| ||||||||| |||||||
Sbjct: 112 gtcaaacttctctaactttgtccaagtttatagaaaaatgcatcaacatctacaatatca 53
Query: 61 aa 62
||
Sbjct: 52 aa 51
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/41 (90%), Gaps = 2/41 (4%)
Strand = Plus / Plus
Query: 132 ttttctaaaaacttggtcaaaaagttagagaagtttgactt 172
||||||| |||||||| |||| ||||||||||||||||||
Sbjct: 76 ttttctataaacttggacaaa--gttagagaagtttgactt 114
>42619_sbi-MIR437t:mirbase
Length = 170
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/41 (92%), Gaps = 2/41 (4%)
Strand = Plus / Plus
Query: 132 ttttctaaaaacttggtcaaaaagttagagaagtttgactt 172
||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 132 ttttctataaacttggtcaaa--gttagagaagtttgactt 170
Score = 46.1 bits (23), Expect = 9e-06
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 1 gtcaaactcatctaactttaaacaagttactagaaaaatgcaccaacatct 51
|||||||| ||||||||| | |||||| ||||||||||||| |||||||
Sbjct: 168 gtcaaacttctctaactttgaccaagtttatagaaaaatgcacaaacatct 118
>42609_sbi-MIR437j:mirbase
Length = 172
Score = 50.1 bits (25), Expect = 6e-07
Identities = 37/40 (92%), Gaps = 2/40 (5%)
Strand = Plus / Minus
Query: 131 attttctaaaaacttggtcaaaaagttagagaagtttgac 170
|||||||| ||||||||||||| ||||||||||||||||
Sbjct: 38 attttctataaacttggtcaaa--gttagagaagtttgac 1
Score = 44.1 bits (22), Expect = 3e-05
Identities = 46/53 (86%), Gaps = 2/53 (3%)
Strand = Plus / Plus
Query: 120 atgttaatataattttctaaaaacttggtcaaaaagttagagaagtttgactt 172
|||||||| || |||| |||||| |||||||| ||||||||||||||||||
Sbjct: 122 atgttaatgtattttttgaaaaacatggtcaaa--gttagagaagtttgactt 172
>42604_sbi-MIR437d:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 6e-07
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 1 gtcaaactcatctaactttaaacaagttactagaaaaatgcaccaacatctagaatatca 60
|||||||| ||||||||||| |||||| ||| |||||||||||| || || || ||||
Sbjct: 132 gtcaaacttctctaactttaaccaagtttataggaaaatgcaccaatatttacaacatca 73
Query: 61 aattagcttcatt 73
||||| ||||||
Sbjct: 72 cattaggttcatt 60
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 aaagttagagaagtttgactt 172
|||||||||||||||||||||
Sbjct: 114 aaagttagagaagtttgactt 134
>42616_sbi-MIR437q:mirbase
Length = 160
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 151 aaaagttagagaagtttgacttag 174
||||||||||||||||||||||||
Sbjct: 137 aaaagttagagaagtttgacttag 160
>42615_sbi-MIR437p:mirbase
Length = 188
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/35 (94%), Gaps = 2/35 (5%)
Strand = Plus / Plus
Query: 140 aaacttggtcaaaaagttagagaagtttgacttag 174
||||||||||||| ||||||||||||||||||||
Sbjct: 156 aaacttggtcaaa--gttagagaagtttgacttag 188
>42618_sbi-MIR437s:mirbase
Length = 176
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 152 aaagttagagaagtttgacttag 174
|||||||||||||||||||||||
Sbjct: 154 aaagttagagaagtttgacttag 176
>42617_sbi-MIR437r:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 152 aaagttagagaagtttgacttag 174
|||||||||||||||||||||||
Sbjct: 158 aaagttagagaagtttgacttag 180
>42601_sbi-MIR437a:mirbase
Length = 190
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 152 aaagttagagaagtttgacttag 174
|||||||||||||||||||||||
Sbjct: 168 aaagttagagaagtttgacttag 190
>42603_sbi-MIR437c:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 aaagttagagaagtttgactt 172
|||||||||||||||||||||
Sbjct: 155 aaagttagagaagtttgactt 175
>42476_ssp-MIR437b:mirbase
Length = 172
Score = 42.1 bits (21), Expect = 1e-04
Identities = 42/48 (87%), Gaps = 2/48 (4%)
Strand = Plus / Plus
Query: 123 ttaatataattttctaaaaacttggtcaaaaagttagagaagtttgac 170
|||||||| |||| || |||||||||| ||||||||| |||||||||
Sbjct: 125 ttaatatatttttgtataaacttggtc--aaagttagacaagtttgac 170
