miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54678_tae-miR167:pmrd
Length = 108
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 1 ctgcccaagggaacgagtgaagctgacagcatgatctatctccgagtgatcaaacaagaa 60
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 1 ctgcccaagggaacgagtgaagctgccagcatgatctagctccgagtgatcaaacaagaa 60
Query: 61 acgctgcggcagcctcacttcttcccg 87
|||||||||||||||||||||||||||
Sbjct: 61 acgctgcggcagcctcacttcttcccg 87
>54981_zma-miR167d:pmrd
Length = 133
Score = 77.8 bits (39), Expect = 1e-15
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 2 tgcccaagggaacgagtgaagctgacagcatgatctatctccgagtgatca 52
|||||||||||||||||||||||| |||||||||||| ||| |||||||||
Sbjct: 1 tgcccaagggaacgagtgaagctgccagcatgatctagctctgagtgatca 51
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 63 gctgcggcagcctcacttcttcccg 87
||||| |||||||||||||||||||
Sbjct: 99 gctgctgcagcctcacttcttcccg 123
>54980_zma-miR167c:pmrd
Length = 132
Score = 77.8 bits (39), Expect = 1e-15
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 2 tgcccaagggaacgagtgaagctgacagcatgatctatctccgagtgatca 52
|||||||||||||||||||||||| |||||||||||| ||| |||||||||
Sbjct: 1 tgcccaagggaacgagtgaagctgccagcatgatctagctcggagtgatca 51
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 63 gctgcggcagcctcacttcttcccg 87
|||| ||||||||||||||||||||
Sbjct: 98 gctgtggcagcctcacttcttcccg 122
>48861_osa-miR167c:pmrd
Length = 163
Score = 65.9 bits (33), Expect = 5e-12
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 5 ccaagggaacgagtgaagctgacagcatgatctatctccgagtgatcaa 53
||||||||||||||||||||| |||||||||||| ||| || |||||||
Sbjct: 4 ccaagggaacgagtgaagctgccagcatgatctagctctgaatgatcaa 52
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 63 gctgcggcagcctcacttcttccc 86
||||||||||||||||||||||||
Sbjct: 129 gctgcggcagcctcacttcttccc 152
>54991_zma-miR167n:pmrd
Length = 221
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 ctgcccaagggaacgagtgaagctgacagcatgatcta 38
|||| |||||||||||||||||||| ||||||||||||
Sbjct: 180 ctgctcaagggaacgagtgaagctgccagcatgatcta 217
>54996_zma-miR167s:pmrd
Length = 99
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 gagtgaagctgacagcatgatctatctccgagtgatca 52
||||||||||| |||||||||||| ||| |||||||||
Sbjct: 1 gagtgaagctgccagcatgatctagctcggagtgatca 38
>54994_zma-miR167q:pmrd
Length = 102
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 gagtgaagctgacagcatgatctatctccgagtgatca 52
||||||||||| |||||||||||| ||| |||||||||
Sbjct: 1 gagtgaagctgccagcatgatctagctcggagtgatca 38
>54993_zma-miR167p:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 15 gagtgaagctgacagcatgatctatctccgagtgatca 52
||||||||||| |||||||||||| ||| |||||||||
Sbjct: 1 gagtgaagctgccagcatgatctagctctgagtgatca 38
>46953_ath-miR167b:pmrd
Length = 109
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 9 gggaacgagtgaagctgacagcatgatctatct 41
|||||| |||||||||| |||||||||||||||
Sbjct: 1 gggaacaagtgaagctgccagcatgatctatct 33
>54427_sbi-miR167a:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 18 tgaagctgacagcatgatctatctccgagtgatca 52
|||||||| |||||||||||| ||| |||||||||
Sbjct: 1 tgaagctgccagcatgatctagctctgagtgatca 35
>51643_ptc-miR167b:pmrd
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 agtgaagctgacagcatgatctatct 41
|||||||||| |||||||||||||||
Sbjct: 9 agtgaagctgccagcatgatctatct 34
>51645_ptc-miR167d:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 gtgaagctgacagcatgatctatct 41
||||||||| |||||||||||||||
Sbjct: 10 gtgaagctgccagcatgatctatct 34
>51349_ppl-miR167a:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 gtgaagctgacagcatgatctatct 41
||||||||| |||||||||||||||
Sbjct: 10 gtgaagctgccagcatgatctatct 34
>48860_osa-miR167b:pmrd
Length = 163
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 2 tgcccaagggaacgagtgaagctgacagcatgatcta 38
|||||||| ||| | ||||||||| ||||||||||||
Sbjct: 2 tgcccaagagaaagcgtgaagctgccagcatgatcta 38
>48557_gma-miR167d:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 6 caagggaacgagtgaagctgacagcatgatcta 38
|||||||| |||||||||| ||||||||||||
Sbjct: 9 caagggaaaaagtgaagctgccagcatgatcta 41
>48308_bdi-miR167:pmrd
Length = 91
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 gtgaagctgacagcatgatctatct 41
||||||||| |||||||||||||||
Sbjct: 10 gtgaagctgccagcatgatctatct 34
>54992_zma-miR167o:pmrd
Length = 160
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 gagtgaagctgacagcatgatcta 38
||||||||||| ||||||||||||
Sbjct: 1 gagtgaagctgccagcatgatcta 24
>54978_zma-miR167a:pmrd
Length = 190
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 gagtgaagctgacagcatgatcta 38
||||||||||| ||||||||||||
Sbjct: 14 gagtgaagctgccagcatgatcta 37
>48859_osa-miR167a:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 gagtgaagctgacagcatgatcta 38
||||||||||| ||||||||||||
Sbjct: 11 gagtgaagctgccagcatgatcta 34
>48858_osa-miR167a:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 gagtgaagctgacagcatgatcta 38
||||||||||| ||||||||||||
Sbjct: 11 gagtgaagctgccagcatgatcta 34
