miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 305 bits (154), Expect = 9e-83
Identities = 154/154 (100%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||||||||||||||||||||
Sbjct: 38 ttagaatgacttacattatggaacggaaggagta 5
Score = 194 bits (98), Expect = 2e-49
Identities = 140/154 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||| |||||| || |||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 5 tactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| || |||| || ||||||||||||||||||||||||||||||| |||||
Sbjct: 65 atgaatctagatatatatagatgtctagattcattaacacctatatgaatgtggaaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 204 bits (103), Expect = 3e-52
Identities = 136/147 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| |||| ||||| |||||||||||||||||| | ||||||||||||||||||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| || ||||||
Sbjct: 125 ctagaatgacttacattgtgaaacgga 151
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| | |||||||||||||| | |||||||| ||| |||||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| ||||||||||||| || | ||||||||||||||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
| ||||||||||||||||| |||||||||||||
Sbjct: 125 gtggaatgacttacattatgaaacggaaggagta 158
Score = 178 bits (90), Expect = 1e-44
Identities = 138/154 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||| ||||||||| |||||||||||||| | ||||| |||||||||||| | || ||
Sbjct: 158 tactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatggta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| |||||||||||||||||| | ||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||| ||||||||||| || ||||| ||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||
Sbjct: 65 atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 178 bits (90), Expect = 1e-44
Identities = 138/154 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| | || |||| || |||||||||||||||| ||||||||||||| ||||||
Sbjct: 98 atgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|| ||||||||||| | || |||||| ||||||
Sbjct: 38 ataaaatgacttacaatgtgaaacggagggagta 5
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 202 bits (102), Expect = 1e-51
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 27 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 87 agattcattaacacctatatgaatgtgggaaatgttagaatg 128
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agattcattaacacctatatgaatgtgggaaatgttagaatg 102
Score = 139 bits (70), Expect = 1e-32
Identities = 94/102 (92%)
Strand = Plus / Minus
Query: 27 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 86
||||||| ||||| ||||||||||||||||||||||||||||||| || |||| || |||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtct 43
Query: 87 agattcattaacacctatatgaatgtgggaaatgttagaatg 128
|||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 42 agattcattaacacctatatgaatgtggaaaatgctagaatg 1
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 196 bits (99), Expect = 6e-50
Identities = 135/147 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|| ||||||||||||| || ||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacgga 12
Score = 163 bits (82), Expect = 9e-40
Identities = 136/154 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||| |||||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| |||||||||||||||| |||||||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 194 bits (98), Expect = 2e-49
Identities = 140/154 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||||| | |||||| | | | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| |||||||||||||||||| | ||||||||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||||||||||
Sbjct: 38 gtagaatgacttacattgtgaaacggaaggagta 5
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||| |||||||||||||||||||||||||| ||||| ||||||||||| | |||||
Sbjct: 5 tactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| |||||||||||||| | | | |||||| | | |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 194 bits (98), Expect = 2e-49
Identities = 140/154 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| ||| |||||||||||| | | |||||||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||| || |||||| ||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
Score = 178 bits (90), Expect = 1e-44
Identities = 138/154 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||| |||||||||||||||||| | | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| | | ||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 134/147 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||| ||||||||||||| |||||||||||||||||| | |||||||| | |||||||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| || ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| | | |||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | |||| || |||| ||||||||||| | ||||||||| || | |||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 134/147 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| |||| ||||||||||| | |||||||||||||||||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 121 ttagaatgacttacattatggaacgga 147
||||||||||||||||| || ||||||
Sbjct: 125 ttagaatgacttacattgtgaaacgga 151
Score = 186 bits (94), Expect = 6e-47
Identities = 139/154 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||| |||| |||||||||||| | |||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||| ||||||| ||||| |||||||||||||||||| | ||||||||||||||||||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 188 bits (95), Expect = 2e-47
Identities = 140/154 (90%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||| ||||||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||| ||||||| |||||| |||||||||||||||| | ||||||||||||||||||
Sbjct: 65 atgaatgtagacat--atatatgtctagattcattaacatcaatatgaatgtgggaaatg 122
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| ||||||||| ||||||
Sbjct: 123 ctagaatgacttacattgtggaacggagggagta 156
Score = 174 bits (88), Expect = 2e-43
Identities = 133/147 (90%), Gaps = 2/147 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||| ||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||||| ||||||| |||| ||||||||||| | |||||||||| | |||||
Sbjct: 96 atgaatctagaca--tatatatgtctacattcattaacatcaatatgaatgtagaaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| |||||||||
Sbjct: 38 ctagaatgacttacattgtggaacgga 12
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 134/147 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||||||| |||| |||||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| |||||||||||||||||| | ||||| |||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| || ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 186 bits (94), Expect = 6e-47
Identities = 139/154 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 186 bits (94), Expect = 6e-47
Identities = 139/154 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| ||| |||||||||||| | | ||||||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||| ||| ||||||||| ||||||
Sbjct: 125 ctagaatgacttatattgtggaacggagggagta 158
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||| |||||| ||||||||||||||||||| ||||||||||| | | |||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| | | ||||||| |||||||||||||||||| |||| |||||||||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 186 bits (94), Expect = 6e-47
Identities = 139/154 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||||||| ||||| ||||||||||| | | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| |||||||||||||| | | ||||||||||||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||| || |||||| ||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||| ||||| |||||||||||| | | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| |||||||||||||||| | | ||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 180 bits (91), Expect = 4e-45
Identities = 133/147 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||| ||||| |||||||||||| | | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| || ||||||
Sbjct: 125 ctagaatgacttacattgtgaaacgga 151
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| |||||||||||||| | | ||||||||||||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 38 atagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 180 bits (91), Expect = 4e-45
Identities = 133/147 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||| | ||||||| |||||||||||| || |||||||||||||| ||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||||||| |||||| || ||||||
Sbjct: 38 ctagaatgacatacattgtgaaacgga 12
Score = 178 bits (90), Expect = 1e-44
Identities = 138/154 (89%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||| |||||||||||||| ||||||||||||||| || ||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||| ||| |||||| |||||||||||||||| | |||||||||||| |||||
Sbjct: 65 atgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 172 bits (87), Expect = 9e-43
Identities = 133/147 (90%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| |||| | ||| | ||||||||||||||| | ||||||||||||||||||
Sbjct: 97 atgaatctaaacatatgtatgt-gctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| || ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 170 bits (86), Expect = 4e-42
Identities = 138/154 (89%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||| || || |||| | |||||||||||||| | ||||||||||||||||||
Sbjct: 65 atgaatctag-cacatacatatgtttagattcattaacatcaatatgaatgtgggaaatg 123
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 124 ctagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 172 bits (87), Expect = 9e-43
Identities = 132/147 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| ||||||||||||||||||||| ||| |||||||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||||| || |||||||| ||||||||||| ||||||| ||||||| ||||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||||||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaacgga 12
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| ||||||||||||||||||||| |||||| ||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||| |||| || || | | |||||||||||||||| |||||||||| |||| ||||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||||| |||||| ||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 172 bits (87), Expect = 9e-43
Identities = 132/147 (89%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 121 ttagaatgacttacattatggaacgga 147
|| ||||||||| ||| || ||||||
Sbjct: 125 ctaaaatgacttatattgtgaaacgga 151
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||| ||||||||| |||||||| |||||||||||| |||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| |||||||||||||||| | ||||||||||||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|| ||||||||||||| || |||||| ||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||| || |||| ||||| | ||||||||||| || |||||||||| | | |||||
Sbjct: 98 atgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||| || |||||| ||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||| ||||||| | |||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| || ||||||| | || |||||||| || |||||||||||||| |||||
Sbjct: 65 atgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||| | |||||| ||||||| |||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| |||||||||||||||| | | ||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || ||||| ||||||
Sbjct: 125 ctagaatgacttacattgtgatacggagggagta 158
Score = 157 bits (79), Expect = 5e-38
Identities = 130/147 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||| |||||||||||||||||||||||||| |||||||||||| | | |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| |||||||||||||||| | |||| |||||||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
| ||||||||||||| || ||||||
Sbjct: 38 caaaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| ||||||||||||||||||||||||||||||||||| | || |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| ||||||||||||||| || | ||||| ||||| ||||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||||| |||||| ||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| | || ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| |||||||||||| || | |||||||||||| |||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||||| |||||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 168 bits (85), Expect = 1e-41
Identities = 136/153 (88%)
Strand = Plus / Minus
Query: 2 actccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaa 61
||||||||||||||| |||||||||||||||||||||| |||||||||||| | ||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 62 tgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatgt 121
||||||||||||| ||||| ||| |||||||| |||| |||||||||| | |||||||
Sbjct: 97 tgaatctagacatatatatctatatagattcactaacctctatatgaatataggaaatgc 38
Query: 122 tagaatgacttacattatggaacggaaggagta 154
||||||||||||||||||| |||||| ||||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagta 5
Score = 153 bits (77), Expect = 8e-37
Identities = 134/153 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||||||||||||||||| | | |||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||| | | ||||||| |||||||||| |||| | ||||||||||||||||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagt 153
||||||||||||||||||| |||||| |||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagt 157
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 165 bits (83), Expect = 2e-40
Identities = 131/147 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| |||||||||||||||||| |||||||||||| | | |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| || ||||| |||||||||||||||||| |||||||||||| ||| |
Sbjct: 98 atgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaag 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||||||||||| ||| || ||||||
Sbjct: 38 ttagaatgacttatattgtgaaacgga 12
Score = 163 bits (82), Expect = 9e-40
Identities = 136/154 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||| |||||||||||| | |||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | |||||||||||||||||||||| | | ||||||||||||||||||
Sbjct: 65 atgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||| ||| || |||||| ||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 165 bits (83), Expect = 2e-40
Identities = 131/147 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| |||||||||||||||||||| | |||||||| | || ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| |||||||| ||||||||| | ||| |||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| || ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 147 bits (74), Expect = 5e-35
Identities = 134/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||| |||||| | ||||||| ||||||||||||| || | |||||||| | | |||||
Sbjct: 65 atgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||| ||| || |||||| ||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 165 bits (83), Expect = 2e-40
Identities = 131/147 (89%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| ||||||||||||||||||||| | |||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||||| || |||||||| ||||||||||| |||||| ||||||| ||||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 121 ttagaatgacttacattatggaacgga 147
||||||||||||||||||| ||||||
Sbjct: 125 ctagaatgacttacattatgaaacgga 151
Score = 147 bits (74), Expect = 5e-35
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| ||||||||||||||||||||| |||||| |||||| |||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||| |||| || || | | |||||||||||||||| |||||||||||| || ||||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||||| |||||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 165 bits (83), Expect = 2e-40
Identities = 131/147 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| | ||||||||||||||| | |||||||| |||| ||||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| || ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 147 bits (74), Expect = 5e-35
Identities = 134/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||||||||||| ||| |||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||| ||||||| |||||||||||||||| ||||||||||| ||||||
Sbjct: 65 atgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 165 bits (83), Expect = 2e-40
Identities = 131/147 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||| ||||| |||||||||||| | || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| ||||||||||||||| | | ||||||||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||| ||| || ||||||
Sbjct: 38 ctagaatgacttatattgtgaaacgga 12
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||| |||||||||||||||||| ||||||||||| | | ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| ||||||||||||| || | |||||||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||| || |||||| ||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 165 bits (83), Expect = 2e-40
Identities = 131/147 (89%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| ||||||||||||||||||||| | | |||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| | ||||||||||||||||||||| | ||||||||||| | | ||
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 121 ttagaatgacttacattatggaacgga 147
||||||||||||||||||| ||||||
Sbjct: 125 ctagaatgacttacattatgaaacgga 151
Score = 147 bits (74), Expect = 5e-35
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| ||||||||||||||||||| | ||||||||||| | |||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| || | | ||| |||||||||||||||| |||||||||| | || ||||
Sbjct: 98 atgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||||| |||||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 136/154 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|| ||| ||| | ||||||| |||||||||||||||| | ||||||||||||||||||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 163 bits (82), Expect = 9e-40
Identities = 136/154 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| || ||| ||| ||||| | |||||||||||| |||||
Sbjct: 98 atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|| ||||||||||||| || |||||| ||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 163 bits (82), Expect = 9e-40
Identities = 136/154 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| ||||||||||||||||||||||||||||||||||| | || |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| ||||||||||||||| || | ||||| ||||| |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaata 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||||| |||||| ||||||
Sbjct: 125 gtagaatgacttacattatgaaacggagggagta 158
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||||||||||| ||| | ||||| ||||| | || ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| |||||||||||| || | |||||||||||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||||| |||||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 163 bits (82), Expect = 9e-40
Identities = 135/154 (87%), Gaps = 9/154 (5%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| |||||||||||||||| | ||||||||||||||||||
Sbjct: 65 atgaatctagacat---------tctagattcattaacatcaatatgaatgtgggaaatg 115
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 116 ctagaatgacttacattgtgaaacggagggagta 149
Score = 157 bits (79), Expect = 5e-38
Identities = 129/147 (87%), Gaps = 9/147 (6%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| || |||||||||||||||| | ||||||||||||||||||
Sbjct: 89 atgaatctaga---------atgtctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| || ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 163 bits (82), Expect = 9e-40
Identities = 109/118 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaa 118
|||||||||||||| ||||| |||||||||||||||| | | ||||||||||||||||
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa 40
Score = 147 bits (74), Expect = 5e-35
Identities = 135/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||| ||||||||||| ||||||| ||| |||||||||||| | | |||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatta 63
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| |||||||||||||||| | |||||||||||| ||||
Sbjct: 64 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaata 123
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||| || |||||| ||||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 163 bits (82), Expect = 9e-40
Identities = 134/151 (88%), Gaps = 4/151 (2%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 61 atgaatctagacatctatatatatctagattcattaacacc----tatatgaatgtggga 116
|||||||||||||| ||||| |||||||||||||||||| | | ||||||| || ||
Sbjct: 102 atgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgcga 43
Query: 117 aatgttagaatgacttacattatggaacgga 147
|||| |||||||||||||||| || ||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacgga 12
Score = 145 bits (73), Expect = 2e-34
Identities = 137/158 (86%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatata----ggt 56
|||| |||||||||||||||||||||||||||||||||| || ||||||| | | |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgat 64
Query: 57 gttaatgaatctagacatctatatatatctagattcattaacacctatatgaatgtggga 116
||||||||||||||| | ||||||| |||||||||||||||| | |||||||||||||
Sbjct: 65 gttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtggga 124
Query: 117 aatgttagaatgacttacattatggaacggaaggagta 154
|||| |||||||||||||||| || |||||| ||||||
Sbjct: 125 aatgctagaatgacttacattgtgaaacggagggagta 162
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 157 bits (79), Expect = 5e-38
Identities = 136/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||| ||||||| ||| |||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| ||| |||||| ||||||| | |||| ||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 122
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagta 156
Score = 149 bits (75), Expect = 1e-35
Identities = 135/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| |||||| |||| | |||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|| |||||| | | ||||||| |||||||||||||||| | |||||||| |||||||||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
| |||||||||||||| || |||||| ||||||
Sbjct: 38 cttgaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 157 bits (79), Expect = 5e-38
Identities = 130/147 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| ||||||||| ||| |||| ||||||| |||| | || ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| || ||||| ||||||||||||||||| | ||||||||||||||||||
Sbjct: 98 atgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| || ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 147 bits (74), Expect = 5e-35
Identities = 134/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| |||||||||||| | ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| ||||||||||||| || | |||| ||||||||||||
Sbjct: 65 atgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaatt 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|| ||||||||| ||| || |||||| ||||||
Sbjct: 125 ctaaaatgacttagattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 157 bits (79), Expect = 5e-38
Identities = 130/147 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| ||||||||||||| ||||||| |||||||||||||| || ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| |||| | | |||||||||||||||||||| ||||||| || |||| || |
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||||||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaacgga 12
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| |||||||||||||||||| || ||| || ||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| || | |||| | ||||||||||| || ||||||||||||||| ||||
Sbjct: 65 atgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|| |||||||||||||||| |||||| ||||||
Sbjct: 125 ctaaaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 157 bits (79), Expect = 5e-38
Identities = 130/147 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| ||||||||||||||||||||| | | |||||||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| || | ||||||||||||||||||||| | ||||||||||| | | ||
Sbjct: 98 atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||||||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaacgga 12
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| ||||||||||||||||||| | ||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| || | | |||||||||||||||||||| |||||||||| | || ||||
Sbjct: 65 atgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||||| |||||| ||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 157 bits (79), Expect = 5e-38
Identities = 136/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||| ||||||| ||| |||||||| | |||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| ||| |||||| ||||||| | |||| ||||| ||||||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 149 bits (75), Expect = 1e-35
Identities = 135/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| |||||| |||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 62
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|| |||||| | | ||||||| |||||||||||||||| | |||||||| |||||||||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
| |||||||||||||| || |||||| ||||||
Sbjct: 123 cttgaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 157 bits (79), Expect = 5e-38
Identities = 135/154 (87%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||| ||||| |||||||||||| | ||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||||||| | |||||||||||| ||| | ||||||||||||||||||
Sbjct: 65 atgaatctagacatc------tgtctagattcattgacatcaatatgaatgtgggaaatg 118
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||||| |||||| ||||||
Sbjct: 119 ctagaatgacttacattatgaaacggagggagta 152
Score = 143 bits (72), Expect = 8e-34
Identities = 128/147 (87%), Gaps = 6/147 (4%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||||||||||||||||| |||||||||||| | ||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||| | || |||||||||||| ||| | ||||||||||||||||||
Sbjct: 92 atgaatctagac------agatgtctagattcattgacatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| || ||||||
Sbjct: 38 atagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 157 bits (79), Expect = 5e-38
Identities = 130/147 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| |||| |||||||||||||| |||||| |||| | || ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|| ||||||||| ||| || ||||||
Sbjct: 38 ctacaatgacttatattgtgaaacgga 12
Score = 123 bits (62), Expect = 7e-28
Identities = 131/154 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||| ||||||||| |||||||| |||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| ||||||||||||| || | |||| |||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||| |||| ||| || |||||| ||||||
Sbjct: 125 ctagaatggcttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 157 bits (79), Expect = 5e-38
Identities = 130/147 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||| | |||||||||| || |||||||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||||| ||||||| |||||||||||||||| ||||||||||||||| |||
Sbjct: 98 atgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaata 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||| ||||||||||||| ||||||
Sbjct: 38 ctagaaagacttacattatgaaacgga 12
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| |||||||||| |||||| ||| |||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| | |||||||||||||||| |||||||||| || | ||||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | ||||||||||| |||||| ||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| | || ||| ||| ||||||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| | ||||||||||| |||||||||| |||||||||| |||| |||
Sbjct: 98 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | |||| |||||| |||||| ||||||
Sbjct: 38 ctagaaagtcttatattatgaaacggagggagta 5
Score = 107 bits (54), Expect = 4e-23
Identities = 99/114 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| ||| |||| | |||||| ||| ||| |||||||||| |||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgg 114
||||| ||||| || || |||| |||||||||||||||| ||||||||||||||
Sbjct: 65 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtgg 118
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| | | |||||||| ||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||||| ||||||||||||||||||||||| |||| |||||||||| ||||
Sbjct: 65 atgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||| || | |||||||| || |||||| ||||||
Sbjct: 125 ttaaaaagtcttacattgtgaaacggagggagta 158
Score = 123 bits (62), Expect = 7e-28
Identities = 131/154 (85%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| | || || |||| ||||||||| |||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| || ||| | | |||||||||||||||| ||||||||||||| | ||||
Sbjct: 98 atgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||| | | |||||||| || |||||| ||||||
Sbjct: 38 ctaggaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| | || ||| ||| ||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| | ||||||||||| |||||||||| |||||||||| |||| |||
Sbjct: 65 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | |||| |||||| |||||| ||||||
Sbjct: 125 ctagaaagtcttatattatgaaacggagggagta 158
Score = 107 bits (54), Expect = 4e-23
Identities = 99/114 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| ||| |||| | |||||| ||| ||| |||||||||| |||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgg 114
||||| ||||| || || |||| |||||||||||||||| ||||||||||||||
Sbjct: 98 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtgg 45
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 151 bits (76), Expect = 3e-36
Identities = 130/147 (88%), Gaps = 2/147 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||| |||||||| ||||||||| ||||||||||||| |||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| || ||||||| ||| |||||||||||| ||| ||||||||||||||||
Sbjct: 96 atgaatctatgca--tatatatgtcttgattcattaacatctacatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|| ||||||||||||| || ||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacgga 12
Score = 149 bits (75), Expect = 1e-35
Identities = 135/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||| |||||||| |||||||||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||| ||||| ||||||| |||||||||||||| ||||||||||||| |||||
Sbjct: 65 atgaatcaagaca--tatatatgcatagattcattaacatctatatgaatgtgaaaaatg 122
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|| |||||||| ||||||| |||||| ||||||
Sbjct: 123 ctaaaatgacttgcattatgaaacggagggagta 156
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 151 bits (76), Expect = 3e-36
Identities = 129/147 (87%), Gaps = 6/147 (4%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| |||||||||||||||||| | |||||||||| | || ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||| |||||||||||||||||| || | ||||||||||||||||||
Sbjct: 92 atgaatctagac------atatatctagattcattagcatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| || ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 141 bits (71), Expect = 3e-33
Identities = 133/154 (86%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| |||||||||||| | || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||| |||||| ||||||||||||| || | |||||||||| |||||||
Sbjct: 65 atgaatctag------atatatgtctagattcattagcatcaatatgaatgtaggaaatg 118
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||| ||| || |||||| ||||||
Sbjct: 119 ctagaatgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 149 bits (75), Expect = 1e-35
Identities = 135/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||| |||||||||||||||||| |||| || |||| | |||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||| ||||| || |||||||||||||||||| | ||||||||||||||||||
Sbjct: 96 atgaatctggacat--atgcctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 135 bits (68), Expect = 2e-31
Identities = 128/147 (87%), Gaps = 2/147 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||| || |||| || ||||||||||||| | |||| || ||||||||||
Sbjct: 65 atgaatctag--ataggcatatgtccagattcattaacatcaatataaacgtgggaaatg 122
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||| ||| || ||||||
Sbjct: 123 ctagaatgacttatattgtgaaacgga 149
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 129/147 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||| | || ||||||| ||||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||||| |||||| |||||||||||||||| ||||||||||||||| ||||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 121 ttagaatgacttacattatggaacgga 147
||||| | ||||||||||| ||||||
Sbjct: 125 ctagaaagtcttacattatgaaacgga 151
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| |||||||| | |||||||||| |||||||||||||| |||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| || ||| | | |||||||||||||||| ||||||||||||| | ||||
Sbjct: 98 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|| || | ||||||||||| |||||| ||||||
Sbjct: 38 ctaaaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 129/147 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||| | || ||||||| ||||||||||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||||| |||||| |||||||||||||||| ||||||||||||||| ||||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||| | ||||||||||| ||||||
Sbjct: 38 ctagaaagtcttacattatgaaacgga 12
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| |||||||| | |||||||||| |||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| || ||| | | |||||||||||||||| ||||||||||||| | ||||
Sbjct: 65 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|| || | ||||||||||| |||||| ||||||
Sbjct: 125 ctaaaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 147 bits (74), Expect = 5e-35
Identities = 101/110 (91%)
Strand = Plus / Minus
Query: 23 aagtcattctagcattttccacattcatataggtgttaatgaatctagacatctatatat 82
||||||||||||||||| |||||||||||| | ||||||||||||||||||| ||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 83 atctagattcattaacacctatatgaatgtgggaaatgttagaatgactt 132
||||||||||||||||| | ||||||||||| |||||| |||||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 131 bits (66), Expect = 3e-30
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 23 aagtcattctagcattttccacattcatataggtgttaatgaatctagacatctatatat 82
||||||||||||||||| ||||||||||| | |||||||||||||||| | |||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 83 atctagattcattaacacctatatgaatgtgggaaatgttagaatgactt 132
|||||||||||||||| | |||||||||||||||||| |||||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 147 bits (74), Expect = 5e-35
Identities = 135/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||| ||||||||||||||||||||||| ||||||||||| | || ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||||||||||||||||||| |||| ||| |||||||||
Sbjct: 65 atgaatctagataga-atatatatctagattcattaacattaatataaatatgggaaatg 123
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||| || |||||| ||||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157
Score = 137 bits (69), Expect = 5e-32
Identities = 121/137 (88%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||| ||||| ||| ||| |||| |||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| || ||| | ||||||||||||||| || | ||||||||||| ||||||
Sbjct: 97 atgaatctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaatg 39
Query: 121 ttagaatgacttacatt 137
||||||||||||||||
Sbjct: 38 ctagaatgacttacatt 22
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 147 bits (74), Expect = 5e-35
Identities = 101/110 (91%)
Strand = Plus / Plus
Query: 23 aagtcattctagcattttccacattcatataggtgttaatgaatctagacatctatatat 82
||||||||||||||||| |||||||||||| | ||||||||||||||||||| ||||| |
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 83 atctagattcattaacacctatatgaatgtgggaaatgttagaatgactt 132
|| |||||||||||||| | |||||||||||||||||| |||||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 131 bits (66), Expect = 3e-30
Identities = 99/110 (90%)
Strand = Plus / Minus
Query: 23 aagtcattctagcattttccacattcatataggtgttaatgaatctagacatctatatat 82
||||||||||||||||| |||||||||||| | |||||||||||||| | | |||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 83 atctagattcattaacacctatatgaatgtgggaaatgttagaatgactt 132
|||||||||||||||| | |||||||||||||||||| |||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 128/147 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||| |||||||| ||||| ||||| | || ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| |||||||||||||| | |||||||||||||||||
Sbjct: 98 atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| || ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| ||||||||||| | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||| ||||||| ||||||||||||| || | ||||| ||||| ||||||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|| ||||||||||||| || |||||| ||||||
Sbjct: 125 ctaaaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 128/147 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||| |||||||||| | |||||| ||||||| |||| | ||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||| | |||||||||||||||||| | |||| |||||||||||||
Sbjct: 65 atgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatg 124
Query: 121 ttagaatgacttacattatggaacgga 147
|| |||||||||| || || ||||||
Sbjct: 125 ctaaaatgacttactttgtgaaacgga 151
Score = 123 bits (62), Expect = 7e-28
Identities = 131/154 (85%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||| |||||||||| |||||||| ||||||| |||| | |||||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | |||||| ||||||||||| |||| | |||| |||||||||||||
Sbjct: 98 atgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
| |||||||||| || || |||||| ||||||
Sbjct: 38 caaaaatgacttactttgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 139 bits (70), Expect = 1e-32
Identities = 126/147 (85%), Gaps = 12/147 (8%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||| |||||| || ||||| |||||||| | ||||||||||||||||||
Sbjct: 65 atgtatctag------------atatagatacattaacatcaatatgaatgtgggaaatg 112
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| |||||||||
Sbjct: 113 ctagaatgacttacattgtggaacgga 139
Score = 113 bits (57), Expect = 7e-25
Identities = 128/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||| ||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||| ||| ||||||||||| |||||||| | |||||||||||| |||||
Sbjct: 86 atg------------tatctatatctagatacattaacatcaatatgaatgtggaaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||| | |||||||||| |||||||||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| | ||||||| |||||||||||||| ||||||| || ||| ||||
Sbjct: 65 atgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | |||||||| || |||||| ||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 133 bits (67), Expect = 8e-31
Identities = 127/147 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| | |||||||||| |||| || ||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| | || || | || |||||||||||||||| ||| ||||||||||| ||||
Sbjct: 98 atgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||| | |||||||| || ||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||| |||||| ||||||||||||| ||||||||| |||||||| | | |||||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||||| |||| ||| |||||||| ||||| |||||| ||| || ||||||
Sbjct: 98 gtgaatctagacatatatacatacttagattcactaacatctatatcaatatgagaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||||| |||||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||||||||||||||||| || ||| |||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||| || ||||||| |||||||||| ||||| | | |||||||| |||||
Sbjct: 65 gtgaatctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|| |||||||||||||||| ||| || ||||||
Sbjct: 125 ctacaatgacttacattatgaaacagagggagta 158
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 135 bits (68), Expect = 2e-31
Identities = 128/147 (87%), Gaps = 2/147 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||| || ||||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 96 atgaatctag--atatatatatgtctaaattcattaacatgagtatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||||||||| ||| || ||||||
Sbjct: 38 ccagaatgacttatattgtgaaacgga 12
Score = 133 bits (67), Expect = 8e-31
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||| ||||||||||| |||||| ||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||| |||||| |||||||||||||||||||||||| |||||||||| |||||
Sbjct: 65 atgaatttagaca--tatatatatctagattcattaacatgagtatgaatgtgaaaaatg 122
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 135 bits (68), Expect = 2e-31
Identities = 128/147 (87%), Gaps = 2/147 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| ||||||||||||| ||| |||||||| ||||| | ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||| || |||||| || ||||||||||||| ||||||||||||||| ||||
Sbjct: 96 atgaatctagccac--atatatgtccagattcattaacatctatatgaatgtgggcaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||| |||||| ||||||
Sbjct: 38 ctagaatgacttatattatgaaacgga 12
Score = 115 bits (58), Expect = 2e-25
Identities = 127/149 (85%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 6 cctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaa 65
||||||||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 66 tctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatgttaga 125
||| |||| ||||| | |||||||||||| | ||||| ||||||||| ||| ||||
Sbjct: 70 tctggaca--tatatgtggctagattcattagtatctataagaatgtgggcaatcctaga 127
Query: 126 atgacttacattatggaacggaaggagta 154
|||||||| ||| || |||||| ||||||
Sbjct: 128 atgacttatattgtgaaacggagggagta 156
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 133 bits (67), Expect = 8e-31
Identities = 132/154 (85%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcata------ttg 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||| |||||||||| | ||| |||||| | ||||||||| | |||||||||||| |||||
Sbjct: 98 atgtatctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 119 bits (60), Expect = 1e-26
Identities = 125/147 (85%), Gaps = 6/147 (4%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||| | |||| | || |||| ||||||| ||| | |||||||| ||| |||||
Sbjct: 65 atgagtttagatagatacatatgtctagat------acatcaatatgaatatggaaaatg 118
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| || ||||||
Sbjct: 119 ctagaatgacttacattgtgaaacgga 145
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 91/99 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| |||||||| |||| |||||||||||| | | |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 61 atgaatctagacatctatatatatctagattcattaaca 99
|||||||||||||| ||||| ||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaaca 60
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||||||| |||||| | |||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | ||||||| |||||||||||||| | | |||||||||||||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaata 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||| |||||||| || |||||| ||||||
Sbjct: 125 ctagaatgtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 127/147 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| | ||||| |||| |||||||||||||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||||| |||||| |||| || ||||||||||||||| ||||
Sbjct: 98 atgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|| || | ||||||||||| ||||||
Sbjct: 38 ctataaagtcttacattatgaaacgga 12
Score = 107 bits (54), Expect = 4e-23
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| |||||||| | || ||||||| |||||||||||||| || ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|| |||||| | || || || ||||||||||||| || ||||||||||||||| ||||
Sbjct: 65 ataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||| | |||||||| || |||||| ||||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 127/147 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||| | |||||| || ||||||||||||||| |||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| ||| |||||| |||||||||||||||| |||||||||||| | ||||
Sbjct: 98 atgaatctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||| | ||||||||||| ||||||
Sbjct: 38 ctagaaagtcttacattatgaaacgga 12
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| |||||||| | |||||||||| || |||||||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||| | | | |||||||||||||| |||||||||||||| ||
Sbjct: 65 atgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaac 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | ||||||||||| |||||| ||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 127/147 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| | |||||||||| || ||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| | | ||||| | ||||||||||||| || |||| |||||||||| ||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||| | ||||||||||| ||||||
Sbjct: 38 ctagaaagtcttacattatgaaacgga 12
Score = 123 bits (62), Expect = 7e-28
Identities = 131/154 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| |||||||| | |||||||||| ||||||||| |||| || ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||||| |||| ||| |||||||||||||| ||||||||||| ||| ||||
Sbjct: 65 atgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | |||||||| || |||||| ||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 133 bits (67), Expect = 8e-31
Identities = 132/154 (85%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcata------ttg 58
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||| |||||||||| | ||| |||||| | ||||||||| | |||||||||||| ||| |
Sbjct: 59 atgtatctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaagg 118
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||| ||||||
Sbjct: 119 ctagaatgacttacattgtgaaacggagggagta 152
Score = 119 bits (60), Expect = 1e-26
Identities = 125/147 (85%), Gaps = 6/147 (4%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||| | |||| | || |||| ||||||| ||| | |||||||||||| |||||
Sbjct: 92 atgagtttagatagatacatatgtctagat------acatcaatatgaatgtggaaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| || ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 131 bits (66), Expect = 3e-30
Identities = 125/147 (85%), Gaps = 12/147 (8%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||| ||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||| ||||||| |||||||||||||| | |||||||||||| |||||
Sbjct: 86 atgaaactagaca------------tagattcattaacatcaatatgaatgtggaaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||||||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaacgga 12
Score = 121 bits (61), Expect = 3e-27
Identities = 129/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||| ||| ||||| |||||||||| | ||||||||||||||||||
Sbjct: 65 atgaatc------------tatgtctagtttcattaacatcaatatgaatgtgggaaatg 112
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || ||| || ||||||
Sbjct: 113 ctagaatgacttacattgtgaaaccgagggagta 146
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 4 tccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatg 63
|||||||||||||||||||||||||||||||||| | ||||||||||| | | ||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntg 67
Query: 64 aatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatgtta 123
||||||||||| |||||| |||||||||||| ||| | ||||||||||| |||||| ||
Sbjct: 68 aatctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgcta 127
Query: 124 gaatgacttacattatggaacgga 147
|||||||||||||| || ||||||
Sbjct: 128 gaatgacttacattgtgaaacgga 151
Score = 131 bits (66), Expect = 3e-30
Identities = 124/144 (86%)
Strand = Plus / Minus
Query: 4 tccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatg 63
|||||||||||||||||||||||||||||||||||| ||||||||||| | ||| ||||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 64 aatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatgtta 123
||||||||||| ||| ||| |||||||||| | | ||||||||||| || ||| ||
Sbjct: 95 aatctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgcta 36
Query: 124 gaatgacttacattatggaacgga 147
|||||||||||||| || ||||||
Sbjct: 35 gaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| | |||||| | | ||| |||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||| |||||| |||||| |||||||||||||||| ||||||||||||||| |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaata 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | |||||||| || |||||| ||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 123 bits (62), Expect = 7e-28
Identities = 131/154 (85%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| | |||||| ||| |||||||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||| | |||| ||||||||||| |||||||||| |||| | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | |||||||| || |||||| ||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 127 bits (64), Expect = 5e-29
Identities = 125/147 (85%), Gaps = 10/147 (6%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||| ||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 148 tactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 89
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||| ||||||| |||||||||||||||| |||| |||||||||||||
Sbjct: 88 atgaa----------tatatatgtctagattcattaacattaatataaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| || ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacgga 12
Score = 125 bits (63), Expect = 2e-28
Identities = 124/146 (84%), Gaps = 10/146 (6%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| ||||||| |||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||| ||||||||||| | ||||||||||||||||||
Sbjct: 65 atgaatctagacatatat----------attcattaacatcaatatgaatgtgggaaatg 114
Query: 121 ttagaatgacttacattatggaacgg 146
|||||||||||||||| || |||||
Sbjct: 115 ctagaatgacttacattgtgaaacgg 140
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 125 bits (63), Expect = 2e-28
Identities = 124/147 (84%), Gaps = 13/147 (8%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| ||||||| ||||||| | |||| |||||| ||||||
Sbjct: 85 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||||||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaacgga 12
Score = 89.7 bits (45), Expect = 1e-17
Identities = 121/149 (81%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 6 cctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaa 65
||||||||||| |||||||||||||||||||||| |||||| |||| | ||||||| ||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaa 69
Query: 66 tctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatgttaga 125
||||| |||||||||||||||| | |||||||| ||| ||||| ||||
Sbjct: 70 tctag-------------tctagattcattaacatcaatatgaatatggaaaatgctaga 116
Query: 126 atgacttacattatggaacggaaggagta 154
|||||||||||| || |||||| ||||||
Sbjct: 117 atgacttacattgtgaaacggagggagta 145
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 125 bits (63), Expect = 2e-28
Identities = 112/127 (88%), Gaps = 1/127 (0%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| | | |||| | |||||||||| |||||||||||||| |||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatatagatgtta 64
Query: 61 a-tgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaat 119
| | |||||||||| ||| ||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 65 aattaatctagacacctacatatatctagattcattaacatctatatgaatgtgggcaat 124
Query: 120 gttagaa 126
| |||||
Sbjct: 125 gctagaa 131
Score = 101 bits (51), Expect = 3e-21
Identities = 130/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| | | |||| | |||||||||| |||||||||||||| |||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 61 atgaatctagacatctatatatatctagattca-ttaacacctatatgaatgtgggaaat 119
||||||||||| || | || | |||||||| | |||||| ||||||||||||||| |||
Sbjct: 99 atgaatctagatatatgtaggtgtctagattaatttaacatctatatgaatgtgggtaat 40
Query: 120 gttagaatgacttacattatggaacggaaggagta 154
| ||||| | |||| | |||| |||||| ||||||
Sbjct: 39 gctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 125 bits (63), Expect = 2e-28
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
|||||||||||||||| | |||||||||||| ||||| |||||||||||||||| || ||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 144 cggaaggagta 154
|||| ||||||
Sbjct: 15 cggagggagta 5
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 108 aatgtgggaaatgttagaatgacttacattatggaacgga 147
||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 88 aatgtgggaaatgttagaatgacttccattatgaaacgga 127
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 47
|||| ||||||||||| |||| ||||||||||| ||||| |||||||
Sbjct: 134 tacttcctccgtttcataatggaagtcattctaacatttcccacatt 88
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 123 bits (62), Expect = 7e-28
Identities = 131/154 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||| |||| | ||||||||||||| |||||||| |||||||| | || ||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||| |||| | ||||||| | ||||||||||| || | |||||||| || ||||||
Sbjct: 65 atgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||| ||| ||||||||| ||||||
Sbjct: 125 ttagaatgacttatattgtggaacggagggagta 158
Score = 109 bits (55), Expect = 1e-23
Identities = 124/147 (84%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||| |||||| |||||||||||| ||||| || |||||||| | || ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| |||| ||||| |||||| |||||||| || | |||||||| ||| ||||
Sbjct: 98 atgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaata 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||| | | |||||||||
Sbjct: 38 ctagaatgacttatactgtggaacgga 12
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 121 bits (61), Expect = 3e-27
Identities = 129/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||||||| ||| |||| | | |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||| || ||||||||||||||||| | ||||||||||| ||||||
Sbjct: 86 atgaatc------------tacatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaagaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 8 tccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaatc 67
|||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 68 taga 71
||||
Sbjct: 72 taga 75
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 121 bits (61), Expect = 3e-27
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 61 atgaatcta 69
|||||||||
Sbjct: 65 atgaatcta 73
Score = 99.6 bits (50), Expect = 1e-20
Identities = 53/54 (98%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatag 54
||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatag 71
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 86 tagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacg 145
|||||||||||||| |||||||||||||||||||| |||||||||||||||| || ||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 146 gaaggagta 154
|| ||||||
Sbjct: 13 gagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 101 ctatatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||||||| |||||||||||||||| || |||||| ||||||
Sbjct: 71 ctatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 119 bits (60), Expect = 1e-26
Identities = 126/147 (85%), Gaps = 2/147 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||| | || ||||||| | |||||| ||| |||||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtta 97
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| || | | |||||||||||||||| ||||||||||||||| ||||
Sbjct: 96 atgaatctagacat--atgtgtgtctagattcattaacatctatatgaatgtgggcaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||| ||||||||||||| ||||||
Sbjct: 38 ctagaaagacttacattatgaaacgga 12
Score = 117 bits (59), Expect = 5e-26
Identities = 131/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| |||||||||| |||||||||| |||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||||| | |||| |||||||||||||||| ||| |||||| | | ||||
Sbjct: 65 atgaatctagaca--cacatatgtctagattcattaacatctagatgaatataagcaatg 122
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|| || | ||||||||||| |||||| ||||||
Sbjct: 123 ctacaaagtcttacattatgaaacggagggagta 156
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 119 bits (60), Expect = 1e-26
Identities = 90/99 (90%), Gaps = 2/99 (2%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| ||||||||| |||||||| ||| |||||||| | |||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 61 atgaatctagacatctatatatatctagattcattaaca 99
||||||||||||| ||||| ||||||||||||||||||
Sbjct: 89 atgaatctagaca--tatatctatctagattcattaaca 53
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/154 (83%), Gaps = 9/154 (5%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||| ||||||||||||||||| ||||||||||| ||||||| || ||||
Sbjct: 5 tacttcctctgtttcacaatgtaagtc-ttctagcatttcccacattgat------gtta 57
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | |||||| |||||||||||||||| | |||||||| |||||||||
Sbjct: 58 atgaatctagatag--atatatgtctagattcattaacatcaatatgaatatgggaaatg 115
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|| ||||||||| ||| || |||||| ||||||
Sbjct: 116 ctaaaatgacttatattgtgaaacggagggagta 149
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 125/147 (85%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| | |||||||||| ||| |||||| ||| || ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| | ||| | | |||||||||||||| |||||| ||||||| ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||| | |||||||| || ||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacgga 12
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||| | |||||||||| |||||| |||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| ||| || |||| ||||||||||||| || ||| |||||| |||| ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | |||||||| || |||||| ||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 117 bits (59), Expect = 5e-26
Identities = 131/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| |||||||| | |||||||||| |||||||||||||| |||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||||| ||||| ||||||||||||||| | |||||||| | || ||||
Sbjct: 96 atgaatctagaca--cgcatatacctagattcattaacatcaatatgaatataggcaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | ||||||||||| |||||| ||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggagggagta 5
Score = 87.7 bits (44), Expect = 4e-17
Identities = 122/147 (82%), Gaps = 2/147 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||| | |||||||||| | | |||||||| | |||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||| | ||| | |||||||||||||||| ||||||||||||| ||||
Sbjct: 65 atgaatctag--gtatatgcgtgtctagattcattaacatttatatgaatgtggacaatg 122
Query: 121 ttagaatgacttacattatggaacgga 147
||||| | ||||||||||| ||||||
Sbjct: 123 ctagaaagtcttacattatgaaacgga 149
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 117 bits (59), Expect = 5e-26
Identities = 74/79 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacatctata 79
|||||||||||||| ||||
Sbjct: 65 atgaatctagacatatata 83
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 76 tatatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttaca 135
||||||| |||||||||||||||| | |||||||||||||||||| ||||||||||||||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 136 ttatggaacgga 147
|| || ||||||
Sbjct: 23 ttgtgaaacgga 12
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 117 bits (59), Expect = 5e-26
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||||||||||||||||| || |||||||| | |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagatt 91
|||||||||||||| ||||| ||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagatt 95
Score = 107 bits (54), Expect = 4e-23
Identities = 127/154 (82%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 145 tacttcctccgttttacaatgtaagtcattctagcatttcccacattcata--------- 95
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||| | ||||||| |||||||||||||||| | |||||||| || ||||||
Sbjct: 94 ----atctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||||| |||||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 61 atgaatctagacat 74
||||||||| ||||
Sbjct: 80 atgaatctatacat 67
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 86 tagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacg 145
|||||||||||||| | |||||||||||| ||||| |||||||||||| ||| || ||||
Sbjct: 72 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacg 131
Query: 146 gaaggagta 154
|| ||||||
Sbjct: 132 gagggagta 140
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacat 74
||||||||||||||
Sbjct: 65 atgaatctagacat 78
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 78 tatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacatt 137
||||| |||||||||||||||| | |||||||||||||||||| ||||||||||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 138 atggaacgga 147
|| ||||||
Sbjct: 21 gtgaaacgga 12
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagt 26
||||||||||||||||||||||||||
Sbjct: 107 tactccctccgtttcacaatgtaagt 82
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||| ||||||| | |||||| | | ||| |||||||||| |||||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||| |||||| |||||| |||||||||||||||| |||||||||| |||| |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaata 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | |||||||| || |||||| ||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 109 bits (55), Expect = 1e-23
Identities = 100/115 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| | |||||| ||| ||| |||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtggg 115
|||||||||||||| ||| | |||| ||||||||||| |||||||||| ||||
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatggg 44
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 115 bits (58), Expect = 2e-25
Identities = 132/155 (85%), Gaps = 5/155 (3%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||| ||||||||||||| |||| |||||||||||| | | ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 61 atgaatctagacatctatatata-tctagattcattaacacctatatgaatgtgggaaat 119
||||||||||| || ||||| ||||||| |||| || | |||||||||||||||||
Sbjct: 65 atgaatctaga----tagatatagtctagatccattggcatcaatatgaatgtgggaaat 120
Query: 120 gttagaatgacttacattatggaacggaaggagta 154
| | ||||||||||||||||| |||||| ||||||
Sbjct: 121 ggtggaatgacttacattatgaaacggagggagta 155
Score = 113 bits (57), Expect = 7e-25
Identities = 125/147 (85%), Gaps = 3/147 (2%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||||||||| | ||||| |||||||||||| | || |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||| ||||||| |||||| ||||||||||||||| | | |||||||||||||||||
Sbjct: 95 atggatctaga---ctatatctatctagattcattagtatcaatatgaatgtgggaaata 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||| ||| || ||||||
Sbjct: 38 ctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||| | |||||||||| ||| |||||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| | ||| ||| |||||||||||||| | ||||| | ||||| |||
Sbjct: 65 atgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaata 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | |||||||| || |||||| ||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 101 bits (51), Expect = 3e-21
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| | |||||| ||| |||| | ||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| | | || |||| |||||||||||||||| ||| |||||| |||| ||||
Sbjct: 98 atgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||| | |||||||| || ||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 115 bits (58), Expect = 2e-25
Identities = 88/98 (89%)
Strand = Plus / Minus
Query: 29 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 88
|||||||||| |||||||||||||| ||||||||||||||| || |||||||||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctag 47
Query: 89 attcattaacacctatatgaatgtgggaaatgttagaa 126
||||||||||| |||||||||||||| |||| |||||
Sbjct: 46 attcattaacatatatatgaatgtgggcaatgctagaa 9
Score = 99.6 bits (50), Expect = 1e-20
Identities = 86/98 (87%)
Strand = Plus / Plus
Query: 29 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 88
|||||||||| ||||||||||||| |||||||||||||||| || ||||| | ||||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctag 68
Query: 89 attcattaacacctatatgaatgtgggaaatgttagaa 126
||||||||||| ||||||||||||||| |||| |||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 113 bits (57), Expect = 7e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| ||| |||||||| | |||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 61 atgaatctagaca 73
|||||||||||||
Sbjct: 79 atgaatctagaca 67
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
|||||||||||||||| | |||||||| ||||||||| |||||||||||||||| || ||
Sbjct: 69 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 128
Query: 144 cggaaggagta 154
|||| ||||||
Sbjct: 129 cggagggagta 139
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 113 bits (57), Expect = 7e-25
Identities = 128/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||| |||||| |||||||||||||||||| | | |||||||| | |||||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| |||||||||||||||| | ||||||||||||||||||
Sbjct: 86 atgaatctaga------------tctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|| |||||||||||||||| |||||| ||||||
Sbjct: 38 gtaaaatgacttacattatgaaacggagggagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 121/147 (82%), Gaps = 12/147 (8%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| ||||||||||||| || ||||| |||||||||||| | |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||| ||||||||||||||||| | |||||||| | | |||||
Sbjct: 65 atgaatctag------------atctagattcattaacatcaatatgaatatagtaaatg 112
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||| ||| |||||||||
Sbjct: 113 ctagaatgacttatattgtggaacgga 139
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 113 bits (57), Expect = 7e-25
Identities = 128/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||| |||||||||||| ||| |||| | | |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||| || ||||||||||||||||| | ||||||||||| ||||||
Sbjct: 86 atgaatc------------tacatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| || |||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaagaagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 8 tccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaatc 67
|||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 68 taga 71
||||
Sbjct: 72 taga 75
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 113 bits (57), Expect = 7e-25
Identities = 128/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||| |||||| |||||||||||||||||| | | |||||||| | |||||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| |||||||||||||||| | ||||||||||||||||||
Sbjct: 65 atgaatctaga------------tctagattcattaacatcaatatgaatgtgggaaatg 112
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|| |||||||||||||||| |||||| ||||||
Sbjct: 113 gtaaaatgacttacattatgaaacggagggagta 146
Score = 99.6 bits (50), Expect = 1e-20
Identities = 121/147 (82%), Gaps = 12/147 (8%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| ||||||||||||| || ||||| |||||||||||| | |||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||| ||||||||||||||||| | |||||||| | | |||||
Sbjct: 86 atgaatctag------------atctagattcattaacatcaatatgaatatagtaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||| ||| |||||||||
Sbjct: 38 ctagaatgacttatattgtggaacgga 12
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 113 bits (57), Expect = 7e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| ||| |||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 61 atgaatctagaca 73
|||||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
|||||||||||||||| | |||||||| ||||||||| |||||||||||||||| || ||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 144 cggaaggagta 154
|||| ||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 111 bits (56), Expect = 3e-24
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||| |||||| |||||||| | |||||||||| ||||||||||||||| |||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 61 atgaatctagacatctatat 80
||||||||||||||||||||
Sbjct: 72 atgaatctagacatctatat 53
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
|||||||||||||||| |||||||||||||| |||| ||||| | ||||||||||| ||
Sbjct: 62 tctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 121
Query: 144 cggaaggagta 154
| || ||||||
Sbjct: 122 cagagggagta 132
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatag 54
|||| ||||| ||||| |||||||| | |||||||||| |||||||||||||||
Sbjct: 5 tacttcctccttttcataatgtaagactttctagcattgtccacattcatatag 58
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 111 bits (56), Expect = 3e-24
Identities = 123/147 (83%), Gaps = 15/147 (10%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||| ||||||||||||||||||||||||||||||||||| |||| | |||||
Sbjct: 143 tactctctccgtttcacaatgtaagtcattctagcattttc-------atattgatgtta 91
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| ||| | |||||||||||||| | ||||||||||||||||||
Sbjct: 90 atgaatctaga--------tatgtttagattcattaacatcaatatgaatgtgggaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||||||||||||||| || ||||||
Sbjct: 38 ttagaatgacttacattgtgaaacgga 12
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||| ||||||||||||||||||||||||||| ||||| |||||||||||| | |||||
Sbjct: 5 tactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacat 74
||||||||| ||||
Sbjct: 65 atgaatctaaacat 78
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 124/147 (84%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| | | |||| | |||||||||| ||||| |||||||| |||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||| ||| ||| ||||||| ||||||||||||| || ||||||||||||||| ||||
Sbjct: 65 atgaacctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 121 ttagaatgacttacattatggaacgga 147
||||| | |||| | |||| ||||||
Sbjct: 125 ctagaaagtcttataatatgaaacgga 151
Score = 107 bits (54), Expect = 4e-23
Identities = 129/154 (83%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| | | |||| | |||||||||| |||||||||||||| || ||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| | | ||| |||||||||| |||||||| |||||| ||||
Sbjct: 98 atgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | |||| | |||| |||||| ||||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagta 5
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 109 bits (55), Expect = 1e-23
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||| | || ||||||| |||||||| || ||| | |||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| || | ||| | |||||||||||||||| |||||| |||||| ||||
Sbjct: 96 atgaatctagatatatgtatgtttctagattcattaacatctatat--atgtggacaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | ||||||||||| |||||| ||||||
Sbjct: 38 gtagaaagtcttacattatgaaacggagggagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 123/147 (83%), Gaps = 2/147 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||| | ||||| |||| ||||||| |||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatgtta 62
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||| | || ||||||||||||||||||| | ||| || ||||||| ||||
Sbjct: 63 atgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggacaatg 122
Query: 121 ttagaatgacttacattatggaacgga 147
|| || | |||||||| || ||||||
Sbjct: 123 ctaaaaagtcttacattgtgaaacgga 149
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| ||| |||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| |||||||||||||||||||||| ||| |||||||| | |||||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 80 atgaatctaga 70
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 83 atctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatgga 142
||||||||||||||||| | |||||||| ||||||||| |||||||||||||||| || |
Sbjct: 76 atctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaa 17
Query: 143 acggaaggagta 154
||||| ||||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| | |||||||||| |||||| ||| ||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatg 111
|| ||||||||||| || |||| | |||||||||||||| ||| |||||||
Sbjct: 98 ataaatctagacatatacatatgtttagattcattaacatctaaatgaatg 48
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||| | || ||| ||| | ||||||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| |||| | ||||| |||||||| ||||||| ||| ||| ||||||| ||||
Sbjct: 65 atgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | |||||||| || |||||| ||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||||| | |||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 81 atatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatg 140
||||||||||||||||||| | |||||||| | | ||||| |||||||||||||||| ||
Sbjct: 78 atatctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtg 19
Query: 141 gaacggaaggagta 154
|||||| ||||||
Sbjct: 18 aaacggagggagta 5
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||| |||||||||||| |||| | |||||||||| | |||||
Sbjct: 138 tacttcctccgtttcacaatataagtcattctactatttcctacattcatattgatgtta 79
Query: 61 at 62
||
Sbjct: 78 at 77
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||| ||||| |||||||||||| | |||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 76 atgaatctaga 66
Score = 107 bits (54), Expect = 4e-23
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 77 atatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacat 136
|||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 59 atatctatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacat 118
Query: 137 tatggaacggaaggagta 154
| || |||||| ||||||
Sbjct: 119 tgtgaaacggagggagta 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| |||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||| ||||||||| |||||||||||||||| || ||||||
Sbjct: 56 atatgaatatgggaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 107 bits (54), Expect = 4e-23
Identities = 87/97 (89%), Gaps = 2/97 (2%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| |||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 61 atgaatctagacatctatatatatctagattcattaa 97
||| ||||||||| ||||| ||||||||| ||||||
Sbjct: 69 atggatctagaca--tatatctatctagatccattaa 35
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 77 atatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacat 136
|||||| ||||||| |||||||| | |||||||||||||||||| |||||||||||||||
Sbjct: 52 atatatgtctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacat 111
Query: 137 tatggaacgga 147
|||| ||||||
Sbjct: 112 tatgaaacgga 122
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagt 26
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 61 atgaatctagacat 74
|| |||||||||||
Sbjct: 77 ataaatctagacat 64
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
|||||||| ||||||| |||||||||||||| |||| |||||| |||||||||||| ||
Sbjct: 67 tctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaa 126
Query: 144 cggaaggagta 154
|||| ||||||
Sbjct: 127 cggagggagta 137
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatag 54
|||| ||||||||||| ||||||||| ||||||||||| ||||||||| ||||
Sbjct: 5 tacttcctccgtttcataatgtaagttattctagcattgcccacattcacatag 58
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 107 bits (54), Expect = 4e-23
Identities = 87/98 (88%)
Strand = Plus / Plus
Query: 29 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 88
|||||||||| |||||||||||||| ||||||||||||||||||| ||| | | ||||
Sbjct: 9 ttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgtgtgcctag 68
Query: 89 attcattaacacctatatgaatgtgggaaatgttagaa 126
||||||||||| ||||||||||||||| |||| |||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 83.8 bits (42), Expect = 6e-16
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 29 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 88
|||||||||| |||||||||||||| ||||||||||||||| || ||| || |||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtctag 47
Query: 89 attcattaacacctatatgaatgtgg 114
||||||||||| |||||||||||||
Sbjct: 46 attcattaacatatatatgaatgtgg 21
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 107 bits (54), Expect = 4e-23
Identities = 126/149 (84%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| | | |||| | |||||||||| |||||||||||||| |||||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 61 atgaatc--tagacatctatatatatctagattcattaacacctatatgaatgtgggaaa 118
||||||| || ||| |||||||| |||||||||||||| ||||||||||||||| ||
Sbjct: 100 atgaatctatacacacacatatatatatagattcattaacatctatatgaatgtgggcaa 41
Query: 119 tgttagaatgacttacattatggaacgga 147
|| ||||| | |||| | |||| ||||||
Sbjct: 40 tgctagaaagtcttataatatgaaacgga 12
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| | | |||| | |||||||||| |||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 61 atgaatctagacatcta--tatatatctagattcattaacacctatatgaatgtgggaaa 118
||||||||| | || || | | | | |||||||||||||| ||||||||||||||| ||
Sbjct: 65 atgaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggcaa 124
Query: 119 tgttagaatgacttacattatggaacggaaggagta 154
|| ||||| | |||| | |||| |||||| ||||||
Sbjct: 125 tgctagaaagtcttataatatgaaacggagggagta 160
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 107 bits (54), Expect = 4e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| |||||||||||||||||| |||||||||||| | |||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 61 atgaatctagacat 74
||||||||| ||||
Sbjct: 80 atgaatctatacat 67
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 86 tagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacg 145
|||||||||||||| | |||||||||||||||||| |||||||||||| ||| || ||||
Sbjct: 72 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacg 131
Query: 146 gaaggagta 154
|| ||||||
Sbjct: 132 gagggagta 140
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa
Indica Group
Length = 153
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 61 atgaatcta 69
|||||||||
Sbjct: 65 atgaatcta 73
Score = 99.6 bits (50), Expect = 1e-20
Identities = 123/147 (83%), Gaps = 9/147 (6%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||| ||||||||||||||||||||||||||||| ||||||||||| | |||||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||| || || | | |||||||||||||| | |||||||||||| |||||
Sbjct: 89 atgaaact----atgt-----cacatagattcattaacatcaatatgaatgtggaaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||||||||||||||||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaacgga 12
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| |||||||||||| | ||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 61 atgaatctagaca 73
|||||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatat 84
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
|||||||||||| ||| | |||||||||||||||||| |||||||||||||||| || ||
Sbjct: 75 tctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 144 cgga 147
||||
Sbjct: 15 cgga 12
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||||| ||||||||||||||||||| |||||| ||||||
Sbjct: 84 atatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| | |||||||||| ||||||||||||||| |||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 61 atgaatctagaca 73
|| ||||||||||
Sbjct: 80 ataaatctagaca 68
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatag 54
||||||||||||||||||||||||| | || ||||||| |||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttagcattatccatattcatatag 58
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
|||||||| ||||||| |||||||||||||| |||| ||||| | |||||||| || ||
Sbjct: 70 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaa 129
Query: 144 cggaaggagta 154
|||| ||||||
Sbjct: 130 cggagggagta 140
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||| ||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 61 atgaatcta 69
|||||||||
Sbjct: 70 atgaatcta 62
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 86 tagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacg 145
|||||||||||||| | |||||||||||||||||| |||||||||||||||| || |||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 146 gaaggagta 154
|| ||||||
Sbjct: 122 gagggagta 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||| |||||||||| ||||||||| ||||||||||||||||||||| | |||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 61 at 62
||
Sbjct: 61 at 62
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 118/140 (84%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||| | |||||||||| ||||||||||||| || ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||| || |||||| ||||||||||||| | |||||| |||||||| || |
Sbjct: 98 atgaatctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaacg 39
Query: 121 ttagaatgacttacattatg 140
||||| | |||||||||||
Sbjct: 38 ctagaaagtcttacattatg 19
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||| |||||| |||||||| | ||||||| || ||||||| |||||| | ||
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatacta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||| | | |||||||||||| || |||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | ||||||||||| |||||| ||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 103 bits (52), Expect = 7e-22
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||| | |||||||||| ||||||||||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 61 atgaatctagacatctatat 80
|||||||||||||| |||||
Sbjct: 65 atgaatctagacatatatat 84
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 76 tatatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttaca 135
||||||| |||||||||||||||| ||| |||||||||| |||| ||||| | ||||||
Sbjct: 83 tatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttaca 24
Query: 136 ttatggaacgga 147
|| || ||||||
Sbjct: 23 ttgtgaaacgga 12
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 103 bits (52), Expect = 7e-22
Identities = 123/147 (83%), Gaps = 6/147 (4%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| ||||||||| |||||||||||||||| |||| | || ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||| | ||||||||| |||||||| || | || | |||||| ||||||
Sbjct: 92 atgaatctag------agatatatctaaattcattagcatcaatgtaaatgtgagaaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|| ||||||||||||| || ||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacgga 12
Score = 85.7 bits (43), Expect = 2e-16
Identities = 126/154 (81%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||| |||||||| |||||| | || | || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgcta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||| ||| |||||| ||||||||||||| || | |||| ||||||| |||||
Sbjct: 65 atgaatttag------atatatctctagattcattagcatcaatataaatgtggaaaatg 118
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|| ||||||||| ||| || |||||| ||||||
Sbjct: 119 ctaaaatgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 103 bits (52), Expect = 7e-22
Identities = 118/140 (84%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||| |||||| |||||||| | || ||||||| |||||||||||||| | | |
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatca 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| |||| ||| | | |||||||||||||||| |||||||||||||| || |
Sbjct: 98 atgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtgggcaagg 39
Query: 121 ttagaatgacttacattatg 140
||||| | |||||||||||
Sbjct: 38 ctagaaagtcttacattatg 19
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||| |||||| |||||||| | ||||||| || ||||||||||||| |||||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||||| |||||| | |||||||||| | | ||||||||||||||| ||||
Sbjct: 65 atgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgggcaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|| || | ||||||||||| ||| || ||||||
Sbjct: 125 ctaaaaagtcttacattatgaaaccgagggagta 158
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 103 bits (52), Expect = 7e-22
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 56
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||| |||||||||||||||| | |||||||||||| | |||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 61 atgaatctagacatctatat 80
||||||||| ||||| ||||
Sbjct: 72 atgaatctaaacatcaatat 53
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 86 tagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacg 145
|||||||||||||| | |||||||||||||| ||| |||||||||||| ||| || ||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 146 ga 147
||
Sbjct: 124 ga 125
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||| ||||| |||||||||||||||| || |||||| ||||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 103 bits (52), Expect = 7e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 61 atga 64
||||
Sbjct: 65 atga 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||||||||||| | ||| |||||||||||||||||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatat 77
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 91 tcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacggaagg 150
||||||||| | |||||||||||| ||||| || ||||||||||||| || |||||| ||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 151 agta 154
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 103 bits (52), Expect = 7e-22
Identities = 128/154 (83%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||||||| |||| ||||||| |||| | |||||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||| || || ||| || ||| |||||||||| | |||||||||||||||||
Sbjct: 91 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||||||||| ||| || |||||| ||||||
Sbjct: 38 atagaatgacttatattgtgaaacggagggagta 5
Score = 103 bits (52), Expect = 7e-22
Identities = 124/147 (84%), Gaps = 7/147 (4%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| |||||||||||| |||| |||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||| || |||||||| || || |||||||||| | |||| ||||||||||||
Sbjct: 65 atgaaact--acatctattta-----agtttcattaacatcaatataaatgtgggaaata 117
Query: 121 ttagaatgacttacattatggaacgga 147
|||||||||||||||| || ||||||
Sbjct: 118 ctagaatgacttacattgtgaaacgga 144
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 103 bits (52), Expect = 7e-22
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt- 63
Query: 61 atgaatctagacatctatat 80
||||||||| ||||| ||||
Sbjct: 64 atgaatctaaacatcaatat 83
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatat 80
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 86 tagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacg 145
||||||||| |||| | |||||||||||| ||||| |||||| ||||||||| || ||||
Sbjct: 72 tagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 146 gaaggagta 154
|| ||||||
Sbjct: 13 gagggagta 5
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||| ||| ||||| |||||||||||||||| || ||||||
Sbjct: 80 atatgaatatggaaaatgctagaatgacttacattgtgaaacgga 124
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||| ||||||||||||| ||||||||||| | || ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 81.8 bits (41), Expect = 3e-15
Identities = 124/154 (80%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||| ||||| |||||||||| ||||| |||| | || ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||| ||| |||||||||||||| || | ||||||||||| |||||
Sbjct: 86 atgaatttag------------atctagattcattagcatcaatatgaatgtgaaaaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||| ||||||||| || |||||| ||||||
Sbjct: 38 ctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 61 atgaatc 67
|||||||
Sbjct: 65 atgaatc 71
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||| |||||||||||||| ||||||||||| | |||||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtta 82
Query: 61 atgaatc 67
|||||||
Sbjct: 81 atgaatc 75
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||||||||||||||||| | |||||||||| | |||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 63 atgaatctaga 53
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 82 tatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatgg 141
|||||||||||||||||| | |||||||||| ||||||| |||||||||||||||||||
Sbjct: 51 tatctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatga 110
Query: 142 aacggaaggagta 154
|||||| ||||||
Sbjct: 111 aacggagggagta 123
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttcca 43
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttcca 47
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| | | |||| | |||||| ||| |||| ||||||||| ||| |
Sbjct: 158 tactccctccgtttcatattataagactttctagaattgtccatcttcatatagatgtca 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| ||| ||||||| |||||||||||| ||| |||||||||||||| ||||
Sbjct: 98 atgaatctaaacacatatatatgtctagattcattgacatatatatgaatgtgggcaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
|||||| | |||| | |||| ||||||
Sbjct: 38 ttagaaagtcttataatatgaaacgga 12
Score = 73.8 bits (37), Expect = 6e-13
Identities = 91/109 (83%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| ||| |
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtca 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaa 109
|||||||||||||| ||||| | | |||||||||| ||| |||||||||
Sbjct: 65 atgaatctagacatatatatgtgtttagattcattgacatctatatgaa 113
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| |||||||||||| | || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 61 atgaatc 67
|||||||
Sbjct: 65 atgaatc 71
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||||||||||||||||| |||||||||||| | || ||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgcta 79
Query: 61 atgaatc 67
|||||||
Sbjct: 78 atgaatc 72
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||| |||||||||| |||| |||||||||||||||||| | |||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 77 atatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacat 136
||||||||||||||||||||||| | |||||||||||| |||||||||| ||||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 137 tatggaacggaaggagta 154
|| |||||| ||||||
Sbjct: 113 ggtgaaacggagggagta 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatata 53
||||||||||||||||||||| |||||| | |||||||| || |||||||||
Sbjct: 5 tactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatata 57
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 123/147 (83%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| | |||||||||| || || ||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| ||| || |||| |||||||||||||||| ||| |||||| |||| ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124
Query: 121 ttagaatgacttacattatggaacgga 147
|| || | |||||||| || ||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacgga 151
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||| | || ||||||| ||| |||||| ||| |||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| | ||| | | ||||||||||||| ||||||| || || | ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | |||||||| || |||||| ||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| |||||||||||| ||||| |||||||||||| | |||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 75 atgaatctaga 65
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 82 tatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatgg 141
|||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| ||
Sbjct: 63 tatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtga 122
Query: 142 aacggaaggagta 154
|||||| ||||||
Sbjct: 123 aacggagggagta 135
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatat 56
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||||||| ||||| |||||||||||| ||| || ||||||
Sbjct: 56 atatgaatgtggaaaatgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 101 bits (51), Expect = 3e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| |||||||||||| | |||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 61 atgaatctagacatctata 79
|||||||||||||| ||||
Sbjct: 75 atgaatctagacatatata 57
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatat 56
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 76 tatatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttaca 135
||||||| |||||||||||||| | |||||||||||||||||| ||||||||||||||
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Query: 136 ttatggaacgga 147
|| || ||||||
Sbjct: 117 ttgtgaaacgga 128
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||||| |||||||||||||||| || || ||| ||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| | ||||| |||| | | | | |||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcctatgtacccatagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||||||||||| ||||| | | |||||||||||||| ||| ||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgggtaatg 39
Query: 121 ttagaatgacttacattatggaacgga 147
||||| | ||| ||||||| ||||||
Sbjct: 38 ctagaaagtcttgcattatgaaacgga 12
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| |||| ||| | |||||||||| |||||||||| ||| |||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| ||| ||||||| |||||||||||||||| |||| | | | || ||||
Sbjct: 65 atgaatctaaacacatatatatgtctagattcattaacatctatgggtacataggcaatg 124
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
|||||| | |||||||| || |||||| ||||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| ||||||||||| | | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 81 atatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatg 140
||||||||||||||||| | | ||||||||||| |||||| |||||||||||||||| ||
Sbjct: 78 atatctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtg 19
Query: 141 gaacggaaggagta 154
|||||| ||||||
Sbjct: 18 aaacggagggagta 5
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| |||||||||| |||||||||| |||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 61 atgaatctagacat 74
||||||||||||||
Sbjct: 65 atgaatctagacat 78
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 78 tatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacatt 137
||||| |||||||||||||||| ||||||||||||||| |||| ||||| ||||||||||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 138 atggaacgga 147
||| ||||||
Sbjct: 21 atgaaacgga 12
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcatt 38
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 122 tactccctccgtttcataatgtaagactttctagcatt 85
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||||||| |||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 61 atgaat 66
||||||
Sbjct: 65 atgaat 70
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
||||| |||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 129 tactctctccgtttcataatgtaagtcattctagcattttccatattcatat 78
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 89 attcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
||||||||||| | |||||||| ||| ||||| |||||||||||||||| || ||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacgga 12
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||| ||| ||||| ||||||||||||||||||| ||||||
Sbjct: 78 atatgaatatggaaaatgctagaatgacttacattatgaaacgga 122
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| |||||||||||| || ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtacta 71
Query: 61 atgaatctagacat 74
||||||||||||||
Sbjct: 70 atgaatctagacat 57
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 77 atatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacat 136
|||||| ||||||||||||| || |||||||||||||||||| |||||||||||||||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacat 112
Query: 137 tatggaacgga 147
| || ||||||
Sbjct: 113 tgtgaaacgga 123
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatata 53
|||| ||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcatata 57
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 102 tatatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||||||| |||||| |||||| ||||||||| || ||||||
Sbjct: 57 tatatgaatgtgagaaatgctagaataacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| ||| |||||||||||| |||||||||||||||||| | |||||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 61 atgaatctagacat 74
||||||||||||||
Sbjct: 79 atgaatctagacat 66
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 78 tatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacatt 137
||||| |||||||||||||||| | |||||||||||| |||||||||||||||||| |||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 138 atggaacgga 147
||| ||||||
Sbjct: 123 atgaaacgga 132
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 47
|||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttttcacatt 51
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 42 cacattcatataggtgttaatgaatctagacatctatatatatctagattcattaacacc 101
||||||||||||| ||| ||||||||||||||| ||||| | |||||||||||||||| |
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatc 34
Query: 102 tatatgaatgtggg 115
||||||||||||||
Sbjct: 33 tatatgaatgtggg 20
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 41 ccacattcatataggtgttaatgaatctagacatctatatatatctagattcattaacac 100
|||||||||||||| |||||||||||||||||| ||||||| |||||||||||| |||
Sbjct: 21 ccacattcatatagatgttaatgaatctagacacatatatatgtctagattcatttacat 80
Query: 101 ctatatgaatgtg 113
|||||||||||||
Sbjct: 81 ctatatgaatgtg 93
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 115/137 (83%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||| | |||||||||| ||||| ||||||| |||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||| ||| || |||| |||| ||||||||||| ||| |||||||| || |||
Sbjct: 98 atgaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgtaggcaata 39
Query: 121 ttagaatgacttacatt 137
||| || | ||||||||
Sbjct: 38 ttaaaaagtcttacatt 22
Score = 69.9 bits (35), Expect = 1e-11
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||| |||||||||| | || || ||| | |||||||| ||| |||||
Sbjct: 5 tacttcctccgttttacaatgtaagactttttaatattgcctacattcatttagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|||||| ||||||| | || | | |||||||||||||| ||||||| ||||| | ||||
Sbjct: 65 atgaatatagacatatgtacgtgtttagattcattaacatctatatgtatgtgagcaatg 124
Query: 121 ttagaatgacttacattatggaacgga 147
||||| | |||||||| || ||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacgga 151
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||| |||||||||||||||||| | |||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 61 atgaatcta 69
|||||||||
Sbjct: 65 atgaatcta 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 76 tatatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttaca 135
||||| ||| |||||||||||||| | |||| | ||||| ||||| |||||| |||||||
Sbjct: 83 tatatctatatagattcattaacatcaatataattgtggaaaatgctagaataacttaca 24
Query: 136 ttatggaacggaaggagta 154
|| || |||||| ||||||
Sbjct: 23 ttgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcat 29
|||||||||||||||||||||||||||||
Sbjct: 126 tactccctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||||||||| | |||| | |||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 61 atgaatcta 69
|| ||||||
Sbjct: 79 ataaatcta 71
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccaca 45
|||||||||| ||||||||||||||||||| ||||||||| ||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattttagcatttttcaca 49
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 86 tagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacg 145
|||||| ||||||| | |||| | ||||| ||||| |||||||||||||||| || ||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 146 gaaggagta 154
|| ||||||
Sbjct: 131 gagggagta 139
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| |||||||||||| | ||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85
Query: 61 atgaatctagaca 73
|| ||||||||||
Sbjct: 84 ataaatctagaca 72
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| ||||||||||||| |||||||||||| | ||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64
Query: 61 atgaat 66
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 79 atatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacatta 138
||||||||||||||||||| | | |||||||||||||||||| |||||||||||||||||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 139 tggaacgga 147
|| ||||||
Sbjct: 100 tgaaacgga 108
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| |||||||||||||||||||||| |||||||||||| | | |||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 55 atgaatctaga 45
Score = 73.8 bits (37), Expect = 6e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcat 37
|||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 97.6 bits (49), Expect = 4e-20
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatata 53
||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatata 78
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| ||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64
Query: 61 atgaat 66
||||||
Sbjct: 65 atgaat 70
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 77 atatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacat 136
|||||||| || ||||||||||| | ||||||||||| |||||| |||||||||||||||
Sbjct: 82 atatatatatatattcattaacagcaatatgaatgtgagaaatgctagaatgacttacat 23
Query: 137 tatggaacgga 147
| || ||||||
Sbjct: 22 tgtgaaacgga 12
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 102 tatatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||||| ||| ||||| |||||||||||||||| || |||||| ||||||
Sbjct: 78 tatatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||| ||| |||| ||||||||||| | |||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 61 atgaatctagaca 73
|||||||||||||
Sbjct: 87 atgaatctagaca 75
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
|||||||||||||||| | ||||||||||| ||||| || ||||||||||||| || ||
Sbjct: 77 tctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaa 136
Query: 144 cggaaggagta 154
|||| ||||||
Sbjct: 137 cggagggagta 147
Score = 60.0 bits (30), Expect = 9e-09
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||| |||||||||||||||||||| ||| |||| |||||| |||| | |||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattttagtatttgtcacatttatattgatgtta 64
Query: 61 at 62
||
Sbjct: 65 at 66
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 61 a 61
|
Sbjct: 65 a 65
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| |||||||||||| | |||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 71
Query: 61 atga 64
||||
Sbjct: 70 atga 67
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 94 ttaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagt 153
|||||| | |||||||||||||||||| |||||||||||||||| || |||||| |||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 154 a 154
|
Sbjct: 5 a 5
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 91 tcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
||||||||| | |||||||||||||||||| |||||||||||||||| || ||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 123
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| |||||||||||| | || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 61 atgaatct 68
||||||||
Sbjct: 65 atgaatct 72
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||| ||||||||||||||||||| |||||||||||| | |||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 61 at 62
||
Sbjct: 77 at 76
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 87 agattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacgg 146
|||||||||| || | |||||||||||||||||| |||||||||||||||| || |||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 147 a 147
|
Sbjct: 12 a 12
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 93 attaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacggaaggag 152
||||||| | |||||||||||||||||| ||||||||||||| || || |||||| ||||
Sbjct: 76 attaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggag 135
Query: 153 ta 154
||
Sbjct: 136 ta 137
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||| ||||| ||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 61 atgaatctagacatctatat 80
|||||||||||||| |||||
Sbjct: 72 atgaatctagacatatatat 53
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 76 tatatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttaca 135
||||||| |||||||||||||||| ||||||||||||| | |||| ||||||||||||||
Sbjct: 54 tatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttaca 113
Query: 136 ttatg 140
|||||
Sbjct: 114 ttatg 118
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcatt 38
|||||||||||||||| |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 102 tatatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||||| | || |||| ||||||||||||||||||| |||||| ||||||
Sbjct: 57 tatatgaatataggtaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatat 56
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatat 74
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||| ||||| |||||| ||||||||| || |||||| ||||||
Sbjct: 56 atatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||| ||||| |||||| ||||||||| || |||||| ||||||
Sbjct: 74 atatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| |||||||||||||||||| |||||||||||| || ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 61 atgaatctagacatctatat 80
||||||||||| ||| ||||
Sbjct: 72 atgaatctagatatcaatat 53
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 81 atatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatg 140
|||||||||||||||| || |||||||||||||||||| |||||||||||| ||| ||
Sbjct: 59 atatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtg 118
Query: 141 gaacggaaggagta 154
|||||| ||||||
Sbjct: 119 aaacggagggagta 132
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||||||||||||| |||||||||||||||| || ||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatat 56
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| ||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 85
Score = 60.0 bits (30), Expect = 9e-09
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 77 atatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacat 136
|||| |||||| ||| ||||| | | |||| ||||||| ||||| |||||||||||||||
Sbjct: 82 atatttatctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacat 23
Query: 137 tatggaacggaaggagta 154
| || |||||| ||||||
Sbjct: 22 tgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||||||||||||| |||||||||||| ||| || ||||||
Sbjct: 85 atatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 129
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||| |||||| ||||||| ||||||||||||| |||||| ||||||| |||||
Sbjct: 132 tactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtta 73
Query: 61 atgaatctagacatctatat 80
|||||||||||| |||||||
Sbjct: 72 atgaatctagacgtctatat 53
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
|||||||||||||||| ||||||| ||||||| |||| |||||||| |||||||||| ||
Sbjct: 62 tctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaa 121
Query: 144 cggaaggagta 154
| || ||||||
Sbjct: 122 cagagggagta 132
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcatt 38
|||| ||||||||||| |||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatt 42
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 101 ctatatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
||||||| || |||| |||| ||||||||||||||||||| ||||||
Sbjct: 58 ctatatgcatatgggtaatgctagaatgacttacattatgaaacgga 12
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatat 56
Score = 89.7 bits (45), Expect = 1e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatat 74
Score = 58.0 bits (29), Expect = 4e-08
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||| ||||| |||||| ||||||||| || |||||| ||||||
Sbjct: 74 atatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||| ||||| |||||| ||||||||| || |||||| ||||||
Sbjct: 56 atatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 95.6 bits (48), Expect = 2e-19
Identities = 126/154 (81%), Gaps = 11/154 (7%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||| | |||||||||| |||||||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||||| ||||||||||||||| ||||||| ||||||| ||||
Sbjct: 65 atgaatctagaca-----------ctagattcattaacatctatatgtatgtgggcaatg 113
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | ||||||||||| |||||| ||||||
Sbjct: 114 ctagaaagtcttacattatgaaacggagggagta 147
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||| | |||||||||| |||||| ||||||| |||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 61 atgaatctag 70
||||||||||
Sbjct: 87 atgaatctag 78
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| |||||||||||||||||| |||||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 61 atgaatctagacatctatat 80
||||||||||| ||| ||||
Sbjct: 65 atgaatctagatatcaatat 84
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 81
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 81 atatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatg 140
|||||||||||||||| || |||||||||||||||||| |||||||||||| ||| ||
Sbjct: 78 atatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtg 19
Query: 141 gaacggaaggagta 154
|||||| ||||||
Sbjct: 18 aaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||||||||||||| |||||||||||||||| || ||||||
Sbjct: 81 atatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 125
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 4 tccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatg 63
|||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 64 aatctagacat 74
|||||||||||
Sbjct: 75 aatctagacat 65
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 4 tccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatat 56
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 78 tatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacatt 137
||||| |||||||||||| ||| ||||||||||| |||||| ||||||||||||||||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacatt 121
Query: 138 atggaacgga 147
|| ||||||
Sbjct: 122 gtgaaacgga 131
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
||||||||||| |||||| |||||||||||||||| || ||||||
Sbjct: 56 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||| ||||||||| |||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 61 atgaatctaga 71
|||||| ||||
Sbjct: 65 atgaatgtaga 75
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 82 tatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatgg 141
|||||| ||||||||||| | |||||||| ||| |||||||||||||||||||||| ||
Sbjct: 77 tatctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtga 18
Query: 142 aacgga 147
||||||
Sbjct: 17 aacgga 12
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||| ||||||||||||| ||| ||||| || ||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattttagtatttttcatattcatat 85
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 125 aatgacttacattatggaacggaaggagta 154
|||||||||||||||| |||||| ||||||
Sbjct: 107 aatgacttacattatgaaacggagggagta 136
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 93.7 bits (47), Expect = 7e-19
Identities = 47/47 (100%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 47
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattc 48
||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattttccatattc 52
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 108 aatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||| ||||| |||||||||||||||| || |||||| ||||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 116
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 93.7 bits (47), Expect = 7e-19
Identities = 86/99 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||| ||||||||||||||| | |||||||||| |||||||||| ||| |||||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaaca 99
||||||||| |||| | ||| | | ||||||||||||||
Sbjct: 65 atgaatctaaacatatgtatgtgtttagattcattaaca 103
Score = 89.7 bits (45), Expect = 1e-17
Identities = 129/156 (82%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattc--atataggtgt 58
||||||||||||||||||||||||| | || ||||||| ||||| | ||||| |||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgt 101
Query: 59 taatgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaa 118
||||||||||| ||| || |||| | |||||||||||||| ||| ||||||||||| ||
Sbjct: 100 taatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgggtaa 41
Query: 119 tgttagaatgacttacattatggaacggaaggagta 154
|| ||||| | |||||||| || ||| || ||||||
Sbjct: 40 tgctagaaagtcttacattgtgaaacagagggagta 5
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 93.7 bits (47), Expect = 7e-19
Identities = 125/154 (81%), Gaps = 14/154 (9%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| ||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
|| ||||||||||||||| ||||||| | ||||||||||||||||
Sbjct: 65 at--------------atatatatctagatttattaacatcactatgaatgtgggaaata 110
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||||||||||||||||| ||| || ||||||
Sbjct: 111 ctagaatgacttacattatgaaacagagggagta 144
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||| |||||| ||||||||||||||||| |||| ||||||||||| | |||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 61 atgaatctagacatctatat 80
|| |||||||| || |||||
Sbjct: 84 ataaatctagatatatatat 65
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||| |||||||||||||||| |||||||||| | || ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 61 atgaatctaga 71
|||||| ||||
Sbjct: 86 atgaatttaga 76
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||||||||||||||||| ||||| || ||| |||| | || ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 93.7 bits (47), Expect = 7e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||| |||||||| |||||||||||| | |||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 61 atgaatc 67
|||||||
Sbjct: 74 atgaatc 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||| ||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 5 tactccatccgtttcacaatgtaagtcattttggcattttccacattcatat 56
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 82 tatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatgg 141
||||| |||||||||||| | |||||||||||||||||| || ||||||||||||| ||
Sbjct: 62 tatcttgattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtga 121
Query: 142 aacgga 147
||||||
Sbjct: 122 aacgga 127
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||| ||||| | ||||||||||||| || |||||| ||||||
Sbjct: 56 atatgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggagta 5
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||| ||||||||||||||| |||||||| |||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 74 atgaatctaga 64
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatata 53
|||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatata 57
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 102 tatatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||||||||| ||||| ||||||||||||||||||| |||||| ||||||
Sbjct: 57 tatatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 83 atctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatgga 142
||||||||||||||||| |||||||| ||| ||||| ||||| |||||||||| || |
Sbjct: 63 atctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaa 122
Query: 143 acgga 147
|||||
Sbjct: 123 acgga 127
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||| |||||||||||||||||| ||||||||||| | |||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 67 atgaatctaga 57
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 82 tatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatgg 141
|||||||||||||||||| | ||||||||||| |||||| |||||||||||| ||| ||
Sbjct: 55 tatctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtga 114
Query: 142 aacgga 147
||||||
Sbjct: 115 aacgga 120
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattt 39
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||| |||||||| |||||||||||| | || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 61 atgaatctag 70
||||||||||
Sbjct: 65 atgaatctag 74
Score = 73.8 bits (37), Expect = 6e-13
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcat-tctagcattttccacattcatat 52
||||||||||||||||||||||||||||| | |||||||| ||||||||||||
Sbjct: 143 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatat 91
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 80 tatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattat 139
|||| |||||||||||| || | |||||||||||||||||| || ||||||||||||| |
Sbjct: 79 tatagctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgt 20
Query: 140 ggaacgga 147
| ||||||
Sbjct: 19 gaaacgga 12
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 4 tccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatg 63
||||||||||||| |||||||| | |||||||||| ||||||||||||||| |||||| |
Sbjct: 105 tccctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacg 46
Query: 64 aatctagaca 73
||||||||||
Sbjct: 45 aatctagaca 36
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
||||||||| |||||| |||||||||||||| |||| ||||| | ||||||||||| ||
Sbjct: 38 tctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 97
Query: 144 cgga 147
||||
Sbjct: 98 cgga 101
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 91.7 bits (46), Expect = 3e-18
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcat 50
||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| | |||||||||| | |||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 61 atgaat 66
||||||
Sbjct: 54 atgaat 49
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 89 attcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
||||||||||| | |||||||||| ||||||| |||||||||||||||| || ||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacgga 107
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 105 atgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||| |||||||||||||||| || |||||| ||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||| |||||| ||| ||||||| | || ||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 61 atgaatctag 70
||||||||||
Sbjct: 71 atgaatctag 62
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 85 ctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaac 144
|||||||||||| || | ||||||| ||| ||||| |||||||||||||||| || |||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 145 ggaaggagta 154
||| ||||||
Sbjct: 122 ggagggagta 131
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 4 tccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
||||||||||||||||| |||||||||||| ||||| || ||||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||| |||||||| |||||||||||| | || ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 61 atgaatctag 70
||||||||||
Sbjct: 83 atgaatctag 74
Score = 73.8 bits (37), Expect = 6e-13
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcat-tctagcattttccacattcatat 52
||||||||||||||||||||||||||||| | |||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatat 57
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 80 tatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattat 139
|||| |||||||||||| || | |||||||||||||||||| || ||||||||||||| |
Sbjct: 69 tatagctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgt 128
Query: 140 ggaacgga 147
| ||||||
Sbjct: 129 gaaacgga 136
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||| | |||||||||| |||||||||||||| |||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 61 atgaatctagacat 74
|| |||||||||||
Sbjct: 74 ataaatctagacat 61
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 79 atatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacatta 138
|||| |||||||| ||||||| ||||||||||||||| |||| ||||| | ||||||||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattg 118
Query: 139 tggaacgga 147
|| ||||||
Sbjct: 119 tgaaacgga 127
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatag 54
|||||||||||||||| | |||||| | |||||||||| | |||||||||||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcattgttcacattcatatag 58
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 91.7 bits (46), Expect = 3e-18
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 29 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 88
|||||||||| ||| ||||||||| ||||||||||||||| ||| |||||| ||||
Sbjct: 9 ttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctag 68
Query: 89 attcattaacacctatatgaatgtgggaaatgttagaa 126
||||||||||| ||||||||||||||| |||| |||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 91.7 bits (46), Expect = 3e-18
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 29 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 88
|||||||||| |||||||||||||| ||||||||||||||| ||| ||| ||| ||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcctag 47
Query: 89 attcattaacacctatatgaatgtgggaaatgttagaa 126
||||||||||| ||||||||| |||| |||| |||||
Sbjct: 46 attcattaacatatatatgaatatgggcaatgctagaa 9
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||| | |||||||||||||||| |||||||||||||| ||| | |||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 61 atgaatctagacat 74
|||||||||||||
Sbjct: 78 gtgaatctagacat 65
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 78 tatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacatt 137
||||| |||||||||| ||||| | ||| |||||||| ||||||||||||||||||||||
Sbjct: 62 tatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
Query: 138 atggaacggaaggagta 154
|| |||||| ||||||
Sbjct: 122 ataaaacggagggagta 138
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||||||| |||||||||||||||||||||||||| |||||| ||||||
Sbjct: 56 atatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||| |||||||||||||||| ||||| |||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatat 56
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||| | |||||||||| |||||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 61 atgaatctagaca 73
|||||| ||||||
Sbjct: 65 atgaatttagaca 77
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
|||| ||||||||||| ||||||||||||||| |||| ||||| | ||||||||||| ||
Sbjct: 75 tctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 144 cggaaggagta 154
|||| ||||||
Sbjct: 15 cggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatag 54
|||||||||||||||| |||||||| | |||||||||| ||||||||||||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatag 89
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 101 ctatatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||||||||||| |||| ||||| | ||||||||||| |||||| ||||||
Sbjct: 89 ctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatata 53
||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatata 57
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||||||||||||||||| | |||||||||| | | |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 61 atgaat 66
||||||
Sbjct: 66 atgaat 61
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 102 tatatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||| |||||||||| |||||||||||||||| || |||||| ||||||
Sbjct: 57 tatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 89 attcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
||||||||| | | |||||||||| ||||||| |||||||||||||||| || ||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacgga 119
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| ||||||||||||||||| |||| ||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 61 atgaatctagaca 73
|||||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
|||||||||||||||| | ||||||||||| ||||| ||||||||||||||||||| ||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaa 16
Query: 144 cgga 147
||||
Sbjct: 15 cgga 12
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||| ||||| |||||||||||||||||||||| |||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatat 79
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||||||| |||||| ||||||||||||||||||| || ||| ||||||
Sbjct: 79 atatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagta 130
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||| ||||||||||||||||| |||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 61 atgaa 65
|||||
Sbjct: 65 atgaa 69
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 90 ttcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||||| | |||||||||||||||||| ||||||||||| |||| || ||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacgga 12
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattct 32
|||||||| |||||||||||| ||||||||||
Sbjct: 100 tactcccttcgtttcacaatgcaagtcattct 69
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatata 53
||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatata 57
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 47
||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 73.8 bits (37), Expect = 6e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 9 ccgtttcacaatgtaagtcattctagcattttccacattcatata 53
||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatata 54
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 102 tatatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||| ||||||||||||| |||||||||||||||| || |||||| ||||||
Sbjct: 57 tatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 2e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 108 aatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||||||||| |||||||||||||||| || |||||| ||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 102 tatatgaatgtgggaaatgttagaatgacttacattatggaacgg 146
||||| ||||||||||||| |||||||||||||||| || |||||
Sbjct: 54 tatataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||| ||||||||| ||| ||||||||||||||||| | |||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 61 atgaatcta 69
|||||||||
Sbjct: 70 atgaatcta 62
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||||||||||||||||| | | |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatat 56
Score = 52.0 bits (26), Expect = 2e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 86 tagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacg 145
|||||||||||||| | |||||||||||| |||| || ||||||||| ||| || ||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 146 ga 147
||
Sbjct: 122 ga 123
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||| | |||||||||| |||||||||||||| |||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 61 atgaatcta 69
|||||||||
Sbjct: 80 atgaatcta 72
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 86 tagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacg 145
|||||||||||||| ||||||||||||||| |||| ||||| | ||||||||||| ||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 146 gaaggagta 154
|| ||||||
Sbjct: 132 gagggagta 140
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 8 tccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatg 63
||||||||| |||||||| | |||||||||| | |||||||||||| ||||||||
Sbjct: 12 tccgtttcataatgtaagactttctagcattgcctacattcatatagatgttaatg 67
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatat 88
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||| |||||||| || ||| |||| | || ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgcta 64
Query: 61 atgaatctagacat 74
||||||||||||||
Sbjct: 65 atgaatctagacat 78
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 78 tatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacatt 137
||||| ||||||||||||| || | |||| ||| || |||||| || |||||||||||||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacatt 22
Query: 138 atggaacgga 147
|| ||||||
Sbjct: 21 gtgaaacgga 12
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||| ||||| || ||||||||| ||| || |||||| ||||||
Sbjct: 88 atatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 87.7 bits (44), Expect = 4e-17
Identities = 101/120 (84%)
Strand = Plus / Plus
Query: 18 aatgtaagtcattctagcattttccacattcatataggtgttaatgaatctagacatcta 77
|||||||| | |||||||||| |||||||||||| || |||||||||||| || |
Sbjct: 1 aatgtaagactttctagcattgcccacattcatatctatgctaatgaatctaggcacaca 60
Query: 78 tatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacatt 137
||||| |||||||||||| || ||||||||||||||| |||||||||| | ||||||||
Sbjct: 61 tatatgtctagattcatttgcatctatatgaatgtgggcaatgttagaaagtcttacatt 120
Score = 71.9 bits (36), Expect = 2e-12
Identities = 99/120 (82%)
Strand = Plus / Minus
Query: 18 aatgtaagtcattctagcattttccacattcatataggtgttaatgaatctagacatcta 77
|||||||| | ||||| |||| |||||||||||||| || ||||||||||||||| ||
Sbjct: 120 aatgtaagactttctaacattgcccacattcatatagatgcaaatgaatctagacatata 61
Query: 78 tatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacatt 137
| | | |||||||||||| || ||||||||||||| |||| ||||| | ||||||||
Sbjct: 60 tgtgtgcctagattcattagcatagatatgaatgtgggcaatgctagaaagtcttacatt 1
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccaca 45
|||||||||||||| ||||||||| |||||||||||||| |||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcatttcccaca 63
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||| |||||||||| |||||||||||||||| || |||||| ||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| ||||||||||||||||| |||| ||| |||||||| | || ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 61 atgaatctagac 72
||||||||||||
Sbjct: 76 atgaatctagac 65
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
||||||||||||| || | |||||||| |||||||| ||||||||||||||||||| ||
Sbjct: 66 tctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaa 125
Query: 144 cggaaggagta 154
|||| ||||||
Sbjct: 126 cggagggagta 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| ||||||||||||||||||||| ||||||| |||| || ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatat 56
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 87.7 bits (44), Expect = 4e-17
Identities = 81/93 (87%), Gaps = 4/93 (4%)
Strand = Plus / Minus
Query: 31 ctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctagat 90
|||||||| ||||||||||||| |||||||||||||||| ||||||| |||||||
Sbjct: 90 ctagcattgcccacattcatatatatgttaatgaatctaga----tatatatgtctagat 35
Query: 91 tcattaacacctatatgaatgtgggaaatgtta 123
||||||||| |||||||||||||| |||||||
Sbjct: 34 tcattaacatatatatgaatgtgggcaatgtta 2
Score = 85.7 bits (43), Expect = 2e-16
Identities = 71/80 (88%), Gaps = 4/80 (5%)
Strand = Plus / Plus
Query: 41 ccacattcatataggtgttaatgaatctagacatctatatatatctagattcattaacac 100
||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 11 ccacattcatatatatgttaatgaatctagacat----atatatctagattcattaacat 66
Query: 101 ctatatgaatgtgggaaatg 120
|||||||||||||| ||||
Sbjct: 67 atatatgaatgtgggcaatg 86
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| ||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 85
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 77 atatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacat 136
|||| |||||| ||| ||||| | | |||| ||||||||||||| |||||||||||||||
Sbjct: 82 atatttatctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacat 23
Query: 137 tatggaacggaaggagta 154
| || |||||| ||||||
Sbjct: 22 tgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||||||||||||| |||||||||||| ||| || ||||||
Sbjct: 85 atatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 129
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 87.7 bits (44), Expect = 4e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||| |||||||||||||||| |||||||| ||| ||| |||| | || ||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 61 atgaatctagacatctatat 80
||||||||||||||| ||||
Sbjct: 65 atgaatctagacatcaatat 84
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| |||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatat 81
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
||||||||||||| || | |||| ||| ||||||||| || ||||||||||||| |||||
Sbjct: 75 tctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaa 16
Query: 144 cggaaggagta 154
|||| ||||||
Sbjct: 15 cggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||||||||||||| ||||||| |||||||| || ||||||
Sbjct: 81 atatgaatgtgggaaatgctagaatgtcttacattgtgaaacgga 125
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 116/140 (82%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||| | |||||||| | | |||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcactgtttacattcatatagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||| ||||| ||| || || | |||||||||||| ||| |||| |||| ||||| ||||
Sbjct: 65 atggatctatacacttacatgtgtctagattcattgacatctatgtgaacgtgggcaatg 124
Query: 121 ttagaatgacttacattatg 140
||||| | |||| ||||||
Sbjct: 125 ctagaaagtcttatattatg 144
Score = 60.0 bits (30), Expect = 9e-09
Identities = 123/154 (79%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||| |||| ||| |||| | |||||||||| |||| |||| |||| ||| |
Sbjct: 158 tacttcctccgcttcataatataagactttctagcattgcccacgttcacatagatgtca 99
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 120
||||||||||||| | || | | ||||| |||||||| |||||||||||| | ||
Sbjct: 98 atgaatctagacacatgtaagtgtatagatccattaacatctatatgaatgtaaacagtg 39
Query: 121 ttagaatgacttacattatggaacggaaggagta 154
||||| | ||||||||||| |||||| ||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 12 tttcacaatgtaagtcattctagcattttccacattcatat 52
||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatat 64
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||||| |||||||||||| ||| || |||||| ||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgactta 133
|||||||||||||||||| ||||||||||||
Sbjct: 64 atatgaatgtgggaaatgctagaatgactta 94
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| |||||||| ||||||| |||||| ||||||||||| | |||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 77 atatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacat 136
|||| |||||||||||||||||| | ||||||||||| ||||| ||||||| |||||||
Sbjct: 53 atatctatctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacat 112
Query: 137 tatggaacgga 147
|||| ||||||
Sbjct: 113 tatgaaacgga 123
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||||| |||||||||||| ||| || |||||| ||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||| ||||||||| ||| | ||||| | |||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||| ||||||||||||||| ||| |||| ||||||| ||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 71 acatctatatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgac 130
|||| ||||| |||||||||||||||||| | ||||| | ||| ||||| || ||||||
Sbjct: 47 acatttatatctatctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgac 106
Query: 131 ttacattatggaacgga 147
||||||| || ||||||
Sbjct: 107 ttacattgtgaaacgga 123
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||||||||||||||||| || ||| |||| | |||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 61 atgaatctaga 71
|| ||||||||
Sbjct: 85 ataaatctaga 75
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| ||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatat 56
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcata 51
|||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||| ||||||||||||| |||| | ||| |||||| |||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtta 80
Query: 61 atgaatctagacat 74
||||||||||||||
Sbjct: 79 atgaatctagacat 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 78 tatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacatt 137
||||| |||||||||||||||| |||||| ||| | ||||| |||||||||||| |||
Sbjct: 63 tatatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatatt 122
Query: 138 atggaacgga 147
|| ||||||
Sbjct: 123 gtgaaacgga 132
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 104 tatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
||||||||||| |||| |||||||||||||||| || ||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 6 cctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaa 65
||||||||||||||| ||||||||| ||||||||||| |||||||| | || |||||||
Sbjct: 127 cctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaa 68
Query: 66 tctagacatctatat 80
||||||||| |||||
Sbjct: 67 tctagacatatatat 53
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 11 gtttcacaatgtaagtcattctagcattttccacattcatata 53
||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccgcattcatata 57
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 102 tatatgaatgtgggaaatgttagaatgacttacatt 137
|||||||||| |||||||| ||||||||||||||||
Sbjct: 57 tatatgaatgcgggaaatgctagaatgacttacatt 22
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 76 tatatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttaca 135
||||||| ||||||||||||| || | |||||||| || ||||| || ||||||||| |
Sbjct: 54 tatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttata 113
Query: 136 ttatggaacgga 147
|| || ||||||
Sbjct: 114 ttgtgaaacgga 125
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcata 51
|||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattt 39
||||||||| |||||||||||||||||||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcattt 43
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 104 tatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
||||||||||||||||| |||||||||||||||| || ||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 88
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||||||||||||| ||| | |||| | |||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||| ||||||||||||||||||| |||| |||||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 77 atatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacat 136
|||| |||||||||||||||||| | |||| | ||| ||||| |||||||||||||||
Sbjct: 53 atatctatctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacat 112
Query: 137 tatggaacgga 147
| || ||||||
Sbjct: 113 tgtgaaacgga 123
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||||||| ||||| |||||||||||||||| | |||||| ||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagta 5
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||| |||||||| |||||||| ||| |||||||| | |||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 61 atgaatctagacatctata 79
|| ||||||||||| ||||
Sbjct: 76 ataaatctagacatttata 58
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattca 49
|||| ||||||||||||||||||||| ||||||| |||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 106 tgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||||||||| |||||| ||||||||| || ||||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacgga 12
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||| ||||| |||||||| | |||||||||| ||||||||||||||| |||||
Sbjct: 5 tactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgtta 64
Query: 61 atgaatctaga 71
|| ||||||||
Sbjct: 65 ataaatctaga 75
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 81 atatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatg 140
||||||||||| ||||||| |||||||||||||| |||| ||||| | |||||||||||
Sbjct: 78 atatctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatg 19
Query: 141 gaacggaaggagta 154
|| ||| ||||||
Sbjct: 18 aaatggagggagta 5
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcatt 38
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 124 tactccctccgtttcataatgtaagactttctagcatt 87
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 83.8 bits (42), Expect = 6e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacat 46
||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcatt 38
|||||||||||||||||||||||| |||||||||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 109 atgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||| |||||||||||||||| || |||||| ||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||| |||||||||| |||||||| | |||||||||| |||| ||| |||||| |||||
Sbjct: 137 tactctctccgtttcataatgtaagactttctagcattgtccatatttatatagatgtta 78
Query: 61 atgaatctagacat 74
||||||||||||||
Sbjct: 77 atgaatctagacat 64
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
|||||||||||||||| |||||| ||| ||| |||| ||||| | ||||||||||| ||
Sbjct: 67 tctagattcattaacatctatataaatatggacaatgctagaaagtcttacattatgaaa 126
Query: 144 cgga 147
||||
Sbjct: 127 cgga 130
Score = 50.1 bits (25), Expect = 9e-06
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 95 taacacctatatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
||||| |||||| |||||||| |||| ||||| | ||||||||||| ||||||
Sbjct: 64 taacatctatataaatgtgggcaatgctagaaagtcttacattatgaaacgga 12
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 83.8 bits (42), Expect = 6e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||||||||||||| ||||| ||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttt-cacatccatattgatgtta 63
Query: 61 atgaat 66
||||||
Sbjct: 64 atgaat 69
Score = 75.8 bits (38), Expect = 2e-13
Identities = 45/46 (97%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 5 ccctccgtttcacaatgtaagtcattctagcattttccacattcat 50
|||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagcatttt-cacattcat 64
Score = 46.1 bits (23), Expect = 1e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 89 attcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
||||||||||| | ||||| ||||| ||||| |||||||||||||||| || ||||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| |||| | |||||||||| |||||| ||||||| |||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 61 atgaatctagacat 74
||||||||| ||||
Sbjct: 76 atgaatctaaacat 63
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 86 tagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacg 145
|||||||||||||| ||||||| ||||||| |||| ||||| | |||| ||| || ||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 146 gaaggagta 154
|| ||||||
Sbjct: 128 gagggagta 136
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| |||| | |||||||||| |||||| ||||||| |||||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 61 atgaatctagacat 74
||||||||| ||||
Sbjct: 65 atgaatctaaacat 78
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 86 tagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacg 145
|||||||||||||| ||||||| ||||||| |||| ||||| | |||| ||| || ||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 146 gaaggagta 154
|| ||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||| ||| ||||||||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 61 at 62
||
Sbjct: 65 at 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcatt 30
||||||||||||||||||||||||| ||||
Sbjct: 110 tactccctccgtttcacaatgtaagccatt 81
Score = 46.1 bits (23), Expect = 1e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 93 attaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
||||||| | |||||||||||| |||| || ||||||||||||| || ||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 83.8 bits (42), Expect = 6e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||||||||||||||||||||||| ||| || |||| | |||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 61 atgaat 66
||||||
Sbjct: 71 atgaat 66
Score = 73.8 bits (37), Expect = 6e-13
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttc 41
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttc 45
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 89 attcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
||||||||||| | |||| || ||| ||||| |||||||||||||||| || ||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacgga 124
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 83.8 bits (42), Expect = 6e-16
Identities = 97/115 (84%), Gaps = 4/115 (3%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||| | || |||| || |||||||||| ||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtggg 115
|||||||||||| |||| ||| |||||||||||||| || |||| |||||||
Sbjct: 65 atgaatctagac----atatgtatttagattcattaacatctttatgtatgtggg 115
Score = 75.8 bits (38), Expect = 2e-13
Identities = 96/115 (83%), Gaps = 4/115 (3%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| |||| | || ||||| | |||||| |||| || |||||
Sbjct: 154 tactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtta 95
Query: 61 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtggg 115
||||||||| | || |||| |||||||||||||||| ||| |||||||||||
Sbjct: 94 atgaatctaaa----tacatatgtctagattcattaacatctaaatgaatgtggg 44
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||||||||||||||||| || |||||||| | | |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 61 atgaatcta 69
|||||||||
Sbjct: 66 atgaatcta 58
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| ||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacatttatat 56
Score = 77.8 bits (39), Expect = 4e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 80 tatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattat 139
||||| |||||||||||| | | |||||||| || |||||| ||||||||||||||||||
Sbjct: 52 tatatttagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattat 111
Query: 140 ggaacggaaggagta 154
| |||||| ||||||
Sbjct: 112 gaaacggagggagta 126
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 81.8 bits (41), Expect = 3e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccaca 45
|||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattttccaca 64
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcat 50
|||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 105 atgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||| |||||||| || ||||||||||||| || |||||| ||||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 110 tgtgggaaatgttagaatgacttacattatggaacgga 147
||||| ||||| |||||||||||||||| || ||||||
Sbjct: 64 tgtggaaaatgctagaatgacttacattgtgaaacgga 101
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||||||| |||||||||||||||||| ||||||| ||| | |||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 61 atgaa 65
|||||
Sbjct: 61 atgaa 57
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| ||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||||||||||||| || ||||||||||||| || ||||||
Sbjct: 56 atatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 12
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 90 ttcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacggaag 149
|||||||||| | ||| ||||||||||||| |||||||||||| ||| || |||||| |
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 150 gagta 154
|||||
Sbjct: 117 gagta 121
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| ||||||||||||| ||||| ||||||||||||||| | |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 61 atga 64
||||
Sbjct: 65 atga 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
||||||||| |||||||||||||||||||||||||| || ||||||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatat 72
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 91 tcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
||||||||| | |||||||||||| || || || |||||||||||||||| ||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacgga 12
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||||||||||| || |||||||||||||||| || ||| || ||||||
Sbjct: 72 atatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 73/84 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| | | |||| | ||||| |||| |||||||||||||| || ||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 79
Query: 61 atgaatctagacatctatatatat 84
|||||||||||||| |||||||||
Sbjct: 78 atgaatctagacatatatatatat 55
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 76 tatatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttaca 135
||||||| ||||||||||||| || ||||||||||||||| |||| ||||| | |||| |
Sbjct: 60 tatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttata 119
Query: 136 ttatggaacggaaggagta 154
|||| |||||| ||||||
Sbjct: 120 atatgaaacggagggagta 138
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagt-cattctagcattttccacattcatataggtgtt 59
|||||||||||||||||||||||||| | |||| ||||| |||||||||||| | ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 60 aatgaatctaga 71
||||||||||||
Sbjct: 65 aatgaatctaga 76
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| |||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatat 86
Score = 77.8 bits (39), Expect = 4e-14
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 77 atatatatctagattcattaacacctatatgaatgtgggaaatgttaga-atgacttaca 135
|||| |||||||||||||||||| | ||||||||||||||||||||||| ||||||||
Sbjct: 83 atatctatctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttaca 24
Query: 136 ttatggaacggaaggagta 154
|| || |||||| ||||||
Sbjct: 23 ttgtgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||| ||||||||| |||||||||||||||| || ||||||
Sbjct: 86 atatgaatatgggaaatgctagaatgacttacattgtgaaacgga 130
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||||||||||||||||| ||| ||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatat 56
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||| ||||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatat 65
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||||||| |||| ||||||||||||||||||| || ||| ||||||
Sbjct: 65 atatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccac 44
||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccac 48
Score = 56.0 bits (28), Expect = 1e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 111 gtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||| |||||||||||||||| || |||||| ||||||
Sbjct: 48 gtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 8 tccgtttcacaatgtaagtcattctagcatt 38
||||||||||||| |||||||||||||||||
Sbjct: 97 tccgtttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatat 87
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||| |||||| ||| |||||||||||||||||||||||||||||| | || ||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgcta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||||||||| || |||||||||||||||| |||||| ||||||
Sbjct: 87 atatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 82 tatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatg 140
||||||||||||||| || | ||||||||||| ||||| |||||||||||| ||||||
Sbjct: 77 tatctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatg 19
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||| |||||||||||||||||| ||||||||||| | || ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 61 atgaatct 68
||||||||
Sbjct: 75 atgaatct 68
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
||||||||| ||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 87 agattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacgg 146
|||||||||| || | ||||||||||| |||||| |||||||||||| ||| || |||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 147 a 147
|
Sbjct: 128 a 128
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacat 136
||||||||||| |||||| |||||||||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaatgacttacat 23
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 79.8 bits (40), Expect = 1e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattc 48
|||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcactttccacattc 52
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| ||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 68
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 8 tccgtttcacaatgtaagtcattctagcattttccacattcatat 52
||||||||||||| |||||||||||||||||| ||| ||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||||||||||||| |||||||||||| ||| || ||||||
Sbjct: 68 atatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 112
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||| ||||||||| |||||||||||| ||| || ||||||
Sbjct: 56 atatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||||||| |||||||||||||||||| ||||||||| || | | |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 61 atgaatct 68
||||||||
Sbjct: 75 atgaatct 68
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattca 49
|||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattca 53
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 87 agattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacgg 146
||||||||||| | | || ||||||||||||||| |||||||||||| ||| || |||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 147 a 147
|
Sbjct: 128 a 128
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 106 tgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||| |||||| |||||||||||| ||| || |||||| ||||||
Sbjct: 53 tgaatgtgtgaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatat 56
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||||||| ||||| |||||||||||||||| || |||||| ||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
||||||||| |||||| ||||||||||||| || |||||| |||||| ||||
Sbjct: 143 tactccctctgtttcataatgtaagtcattttaacatttttcacatttatat 92
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||| |||||| |||||||| |||||||||||||||| ||| || ||||||
Sbjct: 92 atataaatgtgaaaaatgttaaaatgacttacattatgaaacagagggagta 143
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| |||||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 61 atgaatctagacatctatat 80
|||||||||||||| |||||
Sbjct: 72 atgaatctagacatatatat 53
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 76 tatatatatctagattcattaacacctatatgaatgtgggaaatgttagaa 126
||||||| |||||||||||||||| |||||||||||||| |||| |||||
Sbjct: 54 tatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaa 104
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 29 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatatatctag 88
|||||||||| ||||||||||||| ||||||||||||| | || ||||||| |||||
Sbjct: 130 ttctagcattgcccacattcatatatatgttaatgaatcttggcacatatatatgtctag 71
Query: 89 attcattaacacctatatgaatgtgggaaatg 120
||| ||||||| |||||||||||||| ||||
Sbjct: 70 atttattaacatatatatgaatgtgggcaatg 39
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 41 ccacattcatataggtgttaatgaatctagacatctatatatatctagattcattaacac 100
||||||||||||| ||||||| ||||||||||| ||||| | | |||||||||||||
Sbjct: 45 ccacattcatatatatgttaataaatctagacatatatatgtgccaagattcattaacat 104
Query: 101 ctatatgaatgtgggaaatgttagaa 126
|||||||||||||| |||| |||||
Sbjct: 105 atatatgaatgtgggcaatgctagaa 130
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatat 56
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcat 37
|||||||||||||||||||||||||||| ||||||||
Sbjct: 111 tactccctccgtttcacaatgtaagtcaatctagcat 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
||||||||||| |||||| |||||||||||||||| || ||||||
Sbjct: 56 atatgaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 79.8 bits (40), Expect = 1e-14
Identities = 50/52 (96%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagca-tttccacattcatat 55
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| ||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatat 63
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||||||||||||| |||||||||||| ||| || ||||||
Sbjct: 63 atatgaatgtgggaaatgctagaatgacttatattgtgaaacgga 107
Score = 48.1 bits (24), Expect = 4e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||| ||||| |||||||||||| ||| || |||||| ||||||
Sbjct: 55 atatgaatgtgg-aaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 77.8 bits (39), Expect = 4e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
|||||||||||||| | ||||||| || |||| ||| |||||||||||||||||||| ||
Sbjct: 75 tctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaaa 16
Query: 144 cggaaggagta 154
|||| ||||||
Sbjct: 15 cggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatag 54
|||| ||||||||||| ||||||||||||||||||||| || ||||||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcattgtctacattcatatag 83
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| |||||||||||||||| ||| ||| || ||||||| | |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 61 atgaatctagac 72
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 54.0 bits (27), Expect = 6e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 101 ctatatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||||||| | |||| ||||||||||||||||||| ||||||
Sbjct: 83 ctatatgaatgtagacaatgctagaatgacttacattatgaaacgga 129
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacat 46
|||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacat 83
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 109 atgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||||||||| ||||||||||||||||||| |||||| ||||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagta 128
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 78 tatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacatt 137
|||||||||||||||| ||| | |||| |||||| ||||||||||||||||||| |||
Sbjct: 81 tatatatctagattcactaatttccatataaatgtgagaaatgttagaatgacttatatt 22
Query: 138 atggaacg 145
||| ||||
Sbjct: 21 atgaaacg 14
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 4 tccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatg 63
||||||||||||| |||||||| | |||||||||| ||| |||||||||| |||||| |
Sbjct: 8 tccctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacg 67
Query: 64 aatctagaca 73
||||||||||
Sbjct: 68 aatctagaca 77
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
||||||||| |||||| |||||||||| ||| |||| ||||| | ||||||||||| ||
Sbjct: 75 tctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattatgaaa 16
Query: 144 cgga 147
||||
Sbjct: 15 cgga 12
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcat 50
|||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 89 attcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaacg 145
|||||||| || | |||||||||||||||||| || |||||||| |||| |||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacg 105
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 10 cgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaat 66
|||| ||||||| |||||||| |||||||| |||||||||||| | || ||||||||
Sbjct: 105 cgttccacaatgcaagtcattttagcatttcccacattcatattgatgctaatgaat 49
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa
Japonica Group
Length = 143
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacat 46
|||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagtattttccacat 50
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||||||||| ||||| ||| |||||||||||||||||||||| ||| ||||
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatat 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 109 atgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||||| |||| ||||||||||||||||||| |||||| ||||||
Sbjct: 50 atgtggaaaatactagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| ||||||||||| | | |||| | |||||||||| |||||||||||||| |||||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 67
Query: 61 atgaatctagacat 74
||||||||||||||
Sbjct: 66 atgaatctagacat 53
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
|||||||||||||||| ||||||||||||||| |||| ||||| | |||| | |||| ||
Sbjct: 56 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 115
Query: 144 cgga 147
||||
Sbjct: 116 cgga 119
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| ||||||| | || ||||||| |||||||||||||| |||||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtta 83
Query: 61 atgaatctagaca 73
|||||| ||||||
Sbjct: 82 atgaatttagaca 70
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatag 54
|||||||||||||||| |||||||| | |||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatag 58
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
|||| ||||||||||| ||||||||||||||| |||| || || | |||||||||| ||
Sbjct: 72 tctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatgaaa 131
Query: 144 cggaaggagta 154
|||| ||||||
Sbjct: 132 cggagggagta 142
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 101 ctatatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||||||||||| |||| ||||| | ||||||||||| |||||| ||||||
Sbjct: 58 ctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 4 tccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatg 63
|||||||||||||||||||||| | |||||| ||| |||||||| || ||| ||||||||
Sbjct: 115 tccctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatg 56
Query: 64 aatct 68
|||||
Sbjct: 55 aatct 51
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccaca 45
||||||||||||||||||||||||| | |||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaaggctttctagcattgtccaca 49
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| | | |||| | |||||||||| |||||||||| |||| |||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgtccacattcacatagatgtta 64
Query: 61 atgaatctagaca 73
|| ||||||||||
Sbjct: 65 ataaatctagaca 77
Score = 54.0 bits (27), Expect = 6e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtt 59
|||| ||||||||||| | | |||| | |||||||||| ||||||||||||||| ||||
Sbjct: 137 tacttcctccgtttcatattataagactttctagcattgtccacattcatatagatgtt 79
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 73.8 bits (37), Expect = 6e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 76 tatatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgactt 132
||||| ||||||||| |||||||| | |||||||||||||||||| |||||||||||
Sbjct: 67 tatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 123
Score = 69.9 bits (35), Expect = 1e-11
Identities = 66/76 (86%), Gaps = 4/76 (5%)
Strand = Plus / Minus
Query: 23 aagtcattctagcattttccacattcatataggtgttaatgaatctagacatctatatat 82
||||||||||||||||| |||||||||||| | |||||||| ||||||| || ||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctaga----tagatat 68
Query: 83 atctagattcattaac 98
|||||||| |||||||
Sbjct: 67 atctagatacattaac 52
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 83 atctagattcattaacacctatatgaatgtgggaaatgttagaatgactt 132
|||||||| |||||||| | |||||||||||||||||| |||||||||||
Sbjct: 50 atctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattca 49
|||||||||||||||||||| ||||| |||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattca 53
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattt 39
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcattt 88
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 106 tgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||||||||||| |||||| ||||| ||| || |||||| ||||||
Sbjct: 53 tgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 71.9 bits (36), Expect = 2e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcatttt 40
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcatttt 65
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacat 46
|||||||| ||||||||||| ||||||||||||| ||||| |||||
Sbjct: 5 tactcccttcgtttcacaatataagtcattctagtatttttcacat 50
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| ||||||||||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatat 58
Score = 60.0 bits (30), Expect = 9e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcatt 30
||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
||||||||||||||||| || ||||||||||||| || ||||||
Sbjct: 58 atatgaatgtgggaaatactaaaatgacttacattgtgaaacgga 102
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccac 44
|||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcattttccac 48
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattt 39
|||||||| ||||||| ||||||||||||||||||||||
Sbjct: 146 tactcccttcgtttcataatgtaagtcattctagcattt 108
Score = 48.1 bits (24), Expect = 4e-05
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 111 gtgggaaatgttagaatgacttacattatggaacggaaggagta 154
|||| ||||| |||||||||||| |||||| |||||| ||||||
Sbjct: 48 gtggaaaatgctagaatgacttatattatgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 115 gaaatgttagaatgacttacattatggaacggaaggagta 154
|||||| ||||||||||||||||||| |||| | ||||||
Sbjct: 107 gaaatgctagaatgacttacattatgaaacgaagggagta 146
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| |||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatat 56
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 117 aatgttagaatgacttacattatggaacggaaggagta 154
|||| |||||||||||||||| ||||||||||||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacggaaggagta 101
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcatt 38
|||||| |||||| ||||||||||||||||||||||||
Sbjct: 101 tactccttccgttccacaatgtaagtcattctagcatt 64
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 103 atatgaatgtgggaaatgttagaatgacttacattatggaacgga 147
|||| |||||| |||||| |||||||||||||||| || ||||||
Sbjct: 56 atataaatgtgagaaatgctagaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| ||| |||| | |||||||||| ||| |||||||||| || ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 80 atgaatctaga 70
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 83 atctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatgga 142
|||||||||||||| || |||||||||| |||| |||| ||||| | |||| |||||| |
Sbjct: 69 atctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaa 128
Query: 143 acggaaggagta 154
||||| ||||||
Sbjct: 129 acggagggagta 140
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||| |||||| ||| |||||| |||||||||| || |||||||||| |||||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 61 atgaatctaga 71
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 83 atctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatg 140
||||||||||||||||| |||||||||| || | |||| ||||| |||||| ||||||
Sbjct: 76 atctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatg 19
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattt 39
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattt 43
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattt 39
|||| ||||||||||||||| ||||||||| ||||||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcattt 84
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattt 39
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagc 35
|||||||||||||||||||||||||||||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattctagc 60
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacat 46
|||| |||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 109 atgtgggaaatgttagaatgacttacattatggaacgga 147
|||||||||||| |||||||||||||||| |||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacgga 12
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 67.9 bits (34), Expect = 4e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||| |||||||||||||||||||| | |||||||| || |||||||||| ||| |||||
Sbjct: 139 tacttcctccgtttcacaatgtaagactttctagca-ttgccacattcatttagatgtta 81
Query: 61 atgaatctagacat 74
|||||||| ||||
Sbjct: 80 ttgaatctaaacat 67
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcatt 38
|||| ||||||||||||||| |||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatctaagcctttctagcatt 42
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| ||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtta 64
Query: 61 atgaatctagacat 74
||||||||||||||
Sbjct: 65 atgaatctagacat 78
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
||||||||||||||| |||||||||||||| |||| ||||| | |||| | |||| ||
Sbjct: 75 tctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 16
Query: 144 cggaaggagta 154
|||| ||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||||||||||||||||||| |||||||||| |||||| | |||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgtta 64
Query: 61 atgaatctagacat 74
||||||||| ||||
Sbjct: 65 atgaatctaaacat 78
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| ||||
Sbjct: 128 tactccctccgtttcatattataagactttctagcattgcccacattcatatatacgtta 69
Query: 61 atgaatctagacat 74
||||||||||||||
Sbjct: 68 atgaatctagacat 55
Score = 54.0 bits (27), Expect = 6e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 84 tctagattcattaacacctatatgaatgtgggaaatgttagaatgacttacattatggaa 143
||||||||||||||| |||||||||||||| |||| ||||| | |||| | |||| ||
Sbjct: 58 tctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatgaaa 117
Query: 144 cggaaggagta 154
|||| ||||||
Sbjct: 118 cggagggagta 128
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatag 54
||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 120 tactccctccgtttcacaatgtaagagtttctagcattgcccacattcatatag 67
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatag 54
|||| |||||||||||||||||||| | ||||||| || ||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatatag 58
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 101 ctatatgaatgtgggaaatgttagaatgacttacattatggaacggaaggagta 154
||||||||||||||| |||| ||||| |||||||| || |||||| ||||||
Sbjct: 67 ctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagta 120
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcat 50
|||| ||||||||||||||| ||||||||| ||||||||| |||||||||
Sbjct: 137 tacttcctccgtttcacaatataagtcattttagcatttttcacattcat 88
Score = 63.9 bits (32), Expect = 6e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 4 tccctccgtttcacaatgtaagtcattctagcattt 39
||||||||||||||||| ||||||||||||||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctagcattt 43
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 67.9 bits (34), Expect = 4e-11
Identities = 97/117 (82%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 60
||||||||| |||||| | | |||| | |||||| ||| |||||||||||||| |||||
Sbjct: 5 tactccctctgtttcatattataagactttctagaattgcccacattcatatagatgtta 64
Query: 61 atgaatc--tagacatctatatatatctagattcattaacacctatatgaatgtggg 115
||||||| || ||| ||| | | | |||||||||||||| |||||||||||||||
Sbjct: 65 atgaatctatacacacatatgtgtgtatagattcattaacatctatatgaatgtggg 121
Score = 60.0 bits (30), Expect = 9e-09
Identities = 66/77 (85%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 41 ccacattcatataggtgttaatgaatctagacatctatatatatcta--gattcattaac 98
|||||||||||||| |||||||||||||| ||| |||| | | || |||||||||||
Sbjct: 120 ccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaac 61
Query: 99 acctatatgaatgtggg 115
| |||||||||||||||
Sbjct: 60 atctatatgaatgtggg 44
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 65.9 bits (33), Expect = 2e-10
Identities = 86/104 (82%), Gaps = 6/104 (5%)
Strand = Plus / Plus
Query: 29 ttctagcattttccacattcatataggtgttaatgaatctagacatctatatata----- 83
|||||||||| |||||||||||| | |||||||||||||||| || | ||||
Sbjct: 5 ttctagcattgcccacattcatatggatgttaatgaatctagatatatggatattaatgt 64
Query: 84 -tctagattcattaacacctatatgaatgtgggaaatgttagaa 126
|||||||||||||||| | ||||||||||||| ||||||||||
Sbjct: 65 gtctagattcattaacatccatatgaatgtgggcaatgttagaa 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 77/92 (83%), Gaps = 6/92 (6%)
Strand = Plus / Minus
Query: 41 ccacattcatataggtgttaatgaatctagaca------tctatatatatctagattcat 94
|||||||||||| | |||||||||||||||||| | | ||||||||||||||||
Sbjct: 96 ccacattcatatggatgttaatgaatctagacacattaatatccatatatctagattcat 37
Query: 95 taacacctatatgaatgtgggaaatgttagaa 126
||||| | ||||||||||||| |||| |||||
Sbjct: 36 taacatccatatgaatgtgggcaatgctagaa 5
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa
Indica Group
Length = 112
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattcta 33
|||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 1 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatat 52
|||| |||||||||||||||| |||||||||||| ||||| |||||| ||||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatat 57
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 77 atatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgactta 133
|||||| ||||||||||||| || | ||||||||||| |||||| ||||||||||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 22 taagtcattctagcattttccacattcatataggtgttaatgaatctagacat 74
|||||||||||||||||| ||||||||||| | || ||||||||||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagacat 52
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 7 ctccgtttcacaatgtaagtcattctagcattt 39
|||||||||||||||||||||||||||||||||
Sbjct: 83 ctccgtttcacaatgtaagtcattctagcattt 51
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 tactccctccgtttcacaatgtaagtcattctag 34
|||| |||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag 38
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 108 aatgtgggaaatgttagaatgacttacattatggaacgga 147
||||| ||||||| |||||||||||||||| || ||||||
Sbjct: 43 aatgtaggaaatgctagaatgacttacattgtgaaacgga 82
>RF00906;MIR1122;AL844497.4/117501-117363 4530:Oryza sativa (rice)
Length = 139
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 29 ttctagcattttccacattcatataggtgttaatgaatctagaca 73
|||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 107 ttctagcattgtccacattcatatatatgttaatgaatctagaca 63
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 84 tctagattcattaacacctatatgaatgtgg 114
|||||||||||||||| |||||||||||||
Sbjct: 65 tctagattcattaacatatatatgaatgtgg 95
