miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46130_miR319:micropc
          Length = 176

 Score =  264 bits (133), Expect = 3e-71
 Identities = 166/176 (94%), Gaps = 2/176 (1%)
 Strand = Plus / Plus

                                                                       
Query: 21  aagagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcatg 80
           |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 1   aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 60

                                                                       
Query: 81  gatacctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgtgcatg 140
           ||| ||||||||||||||||||| |  |  ||||||||||||||||||||||||||||||
Sbjct: 61  gatgcctctctggtgcagcaatgactaa--tgctcacctgcacttgcatgggtgtgcatg 118

                                                                   
Query: 141 acccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctc 196
           |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 119 acccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 174




>45648_miR159:micropc
          Length = 176

 Score =  264 bits (133), Expect = 3e-71
 Identities = 166/176 (94%), Gaps = 2/176 (1%)
 Strand = Plus / Plus

                                                                       
Query: 21  aagagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcatg 80
           |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 1   aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 60

                                                                       
Query: 81  gatacctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgtgcatg 140
           ||| ||||||||||||||||||| |  |  ||||||||||||||||||||||||||||||
Sbjct: 61  gatgcctctctggtgcagcaatgactaa--tgctcacctgcacttgcatgggtgtgcatg 118

                                                                   
Query: 141 acccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctc 196
           |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 119 acccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 174




>46497_miR159:micropc
          Length = 172

 Score =  260 bits (131), Expect = 4e-70
 Identities = 164/174 (94%), Gaps = 2/174 (1%)
 Strand = Plus / Plus

                                                                       
Query: 23  gagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcatgga 82
           |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 1   gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60

                                                                       
Query: 83  tacctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgtgcatgac 142
           | ||||||||||||||||||| |  |  ||||||||||||||||||||||||||||||||
Sbjct: 61  tgcctctctggtgcagcaatgactaa--tgctcacctgcacttgcatgggtgtgcatgac 118

                                                                 
Query: 143 ccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctc 196
           |||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 172




>45773_miR159:micropc
          Length = 172

 Score =  260 bits (131), Expect = 4e-70
 Identities = 164/174 (94%), Gaps = 2/174 (1%)
 Strand = Plus / Plus

                                                                       
Query: 23  gagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcatgga 82
           |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 1   gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60

                                                                       
Query: 83  tacctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgtgcatgac 142
           | ||||||||||||||||||| |  |  ||||||||||||||||||||||||||||||||
Sbjct: 61  tgcctctctggtgcagcaatgactaa--tgctcacctgcacttgcatgggtgtgcatgac 118

                                                                 
Query: 143 ccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctc 196
           |||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 172




>45590_miR319:micropc
          Length = 173

 Score =  260 bits (131), Expect = 4e-70
 Identities = 164/174 (94%), Gaps = 2/174 (1%)
 Strand = Plus / Plus

                                                                       
Query: 23  gagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcatgga 82
           |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 1   gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60

                                                                       
Query: 83  tacctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgtgcatgac 142
           | ||||||||||||||||||| |  |  ||||||||||||||||||||||||||||||||
Sbjct: 61  tgcctctctggtgcagcaatgactaa--tgctcacctgcacttgcatgggtgtgcatgac 118

                                                                 
Query: 143 ccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctc 196
           |||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 172




>45258_miR319:micropc
          Length = 173

 Score =  260 bits (131), Expect = 4e-70
 Identities = 164/174 (94%), Gaps = 2/174 (1%)
 Strand = Plus / Plus

                                                                       
Query: 23  gagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcatgga 82
           |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 1   gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60

                                                                       
Query: 83  tacctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgtgcatgac 142
           | ||||||||||||||||||| |  |  ||||||||||||||||||||||||||||||||
Sbjct: 61  tgcctctctggtgcagcaatgactaa--tgctcacctgcacttgcatgggtgtgcatgac 118

                                                                 
Query: 143 ccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctc 196
           |||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 172




>46779_miR159:micropc
          Length = 164

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 22  agagctcccttcgatccaat 41
           ||||||||||||||||||||
Sbjct: 164 agagctcccttcgatccaat 145




>45391_miR159:micropc
          Length = 165

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 22  agagctcccttcgatccaat 41
           ||||||||||||||||||||
Sbjct: 164 agagctcccttcgatccaat 145