miRNEST 2.0, an integrative microRNA resource :: BLAST
>42454_sof-MIR159c:mirbase
Length = 238
Score = 274 bits (138), Expect = 3e-74
Identities = 171/181 (94%), Gaps = 2/181 (1%)
Strand = Plus / Plus
Query: 16 gatcgaagagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggt 75
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 39 gatcgaagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggt 98
Query: 76 tcatggatacctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgt 135
|||||||| ||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 99 tcatggatgcctctctggtgcagcaatgactaa--tgctcacctgcacttgcatgggtgt 156
Query: 136 gcatgacccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagct 195
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 157 gcatgacccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagct 216
Query: 196 c 196
|
Sbjct: 217 c 217
>42495_sbi-MIR159b:mirbase
Length = 253
Score = 272 bits (137), Expect = 1e-73
Identities = 167/176 (94%), Gaps = 2/176 (1%)
Strand = Plus / Plus
Query: 21 aagagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcatg 80
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 59 aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 118
Query: 81 gatacctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgtgcatg 140
||| ||||||||||||||||||| | || ||||||||||||||||||||||||||||||
Sbjct: 119 gatgcctctctggtgcagcaatgactga--tgctcacctgcacttgcatgggtgtgcatg 176
Query: 141 acccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctc 196
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 177 acccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 232
>42692_zma-MIR159c:mirbase
Length = 217
Score = 266 bits (134), Expect = 6e-72
Identities = 173/184 (94%), Gaps = 4/184 (2%)
Strand = Plus / Plus
Query: 15 cgatcgaagagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccgg 74
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 15 cgatcgaagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccgg 74
Query: 75 ttcatggatacctctctggtgcagcaatggccgagatgctcac--ctgcacttgcatggg 132
|||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||
Sbjct: 75 ttcatggatacctctctggtgcagcaatggcc--gctgctcacctctgcacttgcatggg 132
Query: 133 tgtgcatgacccgggagacgaaccgaccatcatctttccctcgtgcttggattgaaggga 192
|||||||||||||||||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 133 tgtgcatgacccgggagatgagcccgccatcatctttccctcgtgcttggattgaaggga 192
Query: 193 gctc 196
||||
Sbjct: 193 gctc 196
>41730_bdi-MIR159:mirbase
Length = 234
Score = 143 bits (72), Expect = 6e-35
Identities = 155/180 (86%), Gaps = 7/180 (3%)
Strand = Plus / Plus
Query: 20 gaagagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcat 79
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 27 gaagagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcat 86
Query: 80 ggatacctctctggtgca-gcaatggccgagatgctcacct--gcacttgcatgggtgtg 136
|||||||| ||||||||| ||| | | | | | ||| |||| ||||| ||| ||
Sbjct: 87 ggatacctgtctggtgcatgcagt----gtggtaatagcctgcgcacctgcatcggtttg 142
Query: 137 catgacccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctc 196
|||||||||||||| ||||| ||| | ||||||||||||||||||||||||||||||||
Sbjct: 143 catgacccgggagatgaacctgccagcgtctttccctcgtgcttggattgaagggagctc 202
>41922_osa-MIR159f:mirbase
Length = 188
Score = 105 bits (53), Expect = 1e-23
Identities = 145/174 (83%), Gaps = 10/174 (5%)
Strand = Plus / Plus
Query: 23 gagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcatgga 82
|||||||||||||||||||||||||| | ||||||| || ||||||||||||||||||||
Sbjct: 13 gagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggttcatgga 72
Query: 83 tacctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgtgcatgac 142
||||||| |||| ||| | || ||| ||||||||||||||| ||||||||
Sbjct: 73 tacctctgcagtgc----atgtcgtag--gct----tgcacttgcatgggtttgcatgac 122
Query: 143 ccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctc 196
|||||||| ||||| ||||| |||| | || |||||||||||||||||||||
Sbjct: 123 ccgggagatgaacccaccattgtcttcctcttatgcttggattgaagggagctc 176
>41919_osa-MIR159c:mirbase
Length = 197
Score = 91.7 bits (46), Expect = 2e-19
Identities = 145/177 (81%), Gaps = 7/177 (3%)
Strand = Plus / Plus
Query: 23 gagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcatgga 82
||||||| ||||||||||| |||||| | ||||||| || ||||||||||| ||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtaggatgcagctgccgattcatgga 72
Query: 83 tacctctctggtgcagcaatggccgagatgctca---cctgcacttgcatgggtgtgcat 139
||||||| ||||| |||| | ||||| ||||||||||||||||| |||||
Sbjct: 73 tacctctggagtgca----tggcagcaatgctgtaggcctgcacttgcatgggtttgcat 128
Query: 140 gacccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctc 196
||||||||||| ||||| ||||| |||| | || || ||||||||||||||||||
Sbjct: 129 gacccgggagatgaacccaccattgtcttcctctattgattggattgaagggagctc 185
>41921_osa-MIR159e:mirbase
Length = 191
Score = 85.7 bits (43), Expect = 1e-17
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 20 gaagagctccctt-cgatccaatccaggagggaaagtggtcggctgcagctgccggttca 78
||||||||||||| ||||||||| |||||| | ||||||| || ||||||||||||||||
Sbjct: 10 gaagagctccctttcgatccaattcaggagaggaagtggtaggatgcagctgccggttca 69
Query: 79 tggatacctct 89
|||||||||||
Sbjct: 70 tggatacctct 80
>41920_osa-MIR159d:mirbase
Length = 189
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 23 gagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggttcatgga 82
||||||| ||||||||||| |||||| | ||||||| || ||||||||||||||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatgga 72
Query: 83 tacctct 89
|||||||
Sbjct: 73 tacctct 79
