miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42537_sbi-MIR169i:mirbase
          Length = 169

 Score =  119 bits (60), Expect = 6e-28
 Identities = 123/141 (87%), Gaps = 11/141 (7%)
 Strand = Plus / Plus

                                                                       
Query: 2   tagccaagaatgacttgcctatgcacgccctctgttggcagttccgtccggcagccatgg 61
           ||||||||||||||||||||||||| |||||||||||||| |||| |||   ||||||||
Sbjct: 21  tagccaagaatgacttgcctatgcatgccctctgttggcaattcc-tcc---agccatgg 76

                                                                       
Query: 62  cgacggttgcacaaggtgagtttttgcggcgtggatgatg----caatgtggctgcatcg 117
            ||   ||||||||||||| |||||||||| | |||||||    |||||||||||||| |
Sbjct: 77  aga---ttgcacaaggtgaatttttgcggcatagatgatggatgcaatgtggctgcatgg 133

                                
Query: 118 gcaggtcttcttggctagcca 138
           |||||||||||||||||||||
Sbjct: 134 gcaggtcttcttggctagcca 154




>41977_osa-MIR169n:mirbase
          Length = 177

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 100 tgcaatgtggctgcatcggcaggtcttcttggctagcca 138
           |||||||||||||||| ||| ||||||||||||||||||
Sbjct: 132 tgcaatgtggctgcatgggccggtcttcttggctagcca 170



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 1  gtagccaagaatgacttgcctatg 24
          ||||||||||||||||||||||||
Sbjct: 10 gtagccaagaatgacttgcctatg 33




>41978_osa-MIR169o:mirbase
          Length = 173

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 100 tgcaatgtggctgcatcggcaggtcttcttggctagcca 138
           ||||||| |||||||| ||| ||||||||||||||||||
Sbjct: 128 tgcaatgaggctgcatgggccggtcttcttggctagcca 166



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  gtagccaagaatgacttgccta 22
          ||||||||||||||||||||||
Sbjct: 10 gtagccaagaatgacttgccta 31




>41756_bdi-MIR169d:mirbase
          Length = 187

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                             
Query: 1  gtagccaagaatgacttgcctatgcacgccctctg 35
          |||||||||||||||||||||||||  ||||||||
Sbjct: 30 gtagccaagaatgacttgcctatgcttgccctctg 64