miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42544_sbi-MIR169p:mirbase
Length = 105
Score = 75.8 bits (38), Expect = 6e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1 ttagccaagaatggcttgcctatctccattatttggtccatc 42
||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ttagccaagaatggcttgcctatctccattatttggttcatc 42
>42755_zma-MIR169m:mirbase
Length = 101
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 ttagccaagaatggcttgcctatctccattattt 34
||||||||||||||||||||||||||||||||||
Sbjct: 1 ttagccaagaatggcttgcctatctccattattt 34
>42545_sbi-MIR169q:mirbase
Length = 104
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 ttagccaagaatggcttgcctatctccattattt 34
||||||||||||||||||||||||||||||||||
Sbjct: 1 ttagccaagaatggcttgcctatctccattattt 34
>42214_osa-MIR1430:mirbase
Length = 142
Score = 67.9 bits (34), Expect = 1e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 1 ttagccaagaatggcttgcctatctccattatttggtccatc 42
|||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 19 ttagccaagaatggcttgcctatctccactatttggttcatc 60
>42756_zma-MIR169n:mirbase
Length = 104
Score = 60.0 bits (30), Expect = 3e-10
Identities = 53/60 (88%), Gaps = 3/60 (5%)
Strand = Plus / Plus
Query: 1 ttagccaagaatggcttgcctatctccattatttggtccatcttcttgggagacctccct 60
|||||||||||||||||||||||||||| | |||||| || |||||||||||| ||||
Sbjct: 1 ttagccaagaatggcttgcctatctccactgtttggt---tcgtcttgggagaccaccct 57
>41761_bdi-MIR169i:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 agccaagaatggcttgcctat 23
|||||||||||||||||||||
Sbjct: 33 agccaagaatggcttgcctat 53
