miRNEST 2.0, an integrative microRNA resource :: BLAST
>42564_sbi-MIR319b:mirbase
Length = 179
Score = 299 bits (151), Expect = 5e-82
Identities = 172/179 (96%)
Strand = Plus / Plus
Query: 21 gagagctctcttcagtccactctaaaatggctgtagggtttcattagctgccgactcatc 80
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gagagctctcttcagtccactctaaaatggctgtagagtttcattagctgccgactcatc 60
Query: 81 cattcacctgccaagaaccatgggcaagcggtaggtctggtcttggtagccgagtgggtg 140
||||||||| ||||||||||||| |||||| ||||| |||||||||||||||||||||||
Sbjct: 61 cattcacctaccaagaaccatggacaagcgataggtttggtcttggtagccgagtgggtg 120
Query: 141 gcgcgggagctaaaatcaaactctacgctgtttacggttggactgaagggtgctccctt 199
||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 121 gcgcgggagctaaaatcaagctctacgctgtttatggttggactgaagggtgctccctt 179
>42780_zma-MIR319a:mirbase
Length = 209
Score = 276 bits (139), Expect = 7e-75
Identities = 176/189 (93%), Gaps = 7/189 (3%)
Strand = Plus / Plus
Query: 11 ttctgtggaagagagctctcttcagtccactctaaaatggctgtagggtttcattagctg 70
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 11 ttctctggaagagagctctcttcagtccactctgaaatggctgtagggtttcattagctg 70
Query: 71 ccgactcatccattcacctgccaagaaccatgggcaagcggtaggtctggtcttggtagc 130
||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 71 ccgactcatccattcacctgccaagaaccatggac-------aggtctggtcttggtagc 123
Query: 131 cgagtgggtggcgcgggagctaaaatcaaactctacgctgtttacggttggactgaaggg 190
||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 124 cgagtgggtggcgcgggagctaaaatcaagctctacgctgtttgtggttggactgaaggg 183
Query: 191 tgctccctt 199
|||||||||
Sbjct: 184 tgctccctt 192
>41994_osa-MIR319a:mirbase
Length = 191
Score = 119 bits (60), Expect = 9e-28
Identities = 75/80 (93%)
Strand = Plus / Plus
Query: 18 gaagagagctctcttcagtccactctaaaatggctgtagggtttcattagctgccgactc 77
|||||||||||||||||||||||||| | ||||||||||||||| |||||||||||| ||
Sbjct: 8 gaagagagctctcttcagtccactctcagatggctgtagggttttattagctgccgaatc 67
Query: 78 atccattcacctgccaagaa 97
|||||||||||| |||||||
Sbjct: 68 atccattcacctaccaagaa 87
>41771_bdi-MIR319b:mirbase
Length = 190
Score = 111 bits (56), Expect = 2e-25
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 19 aagagagctctcttcagtccactctaaaatggctgtagggtttcattagctgccgactca 78
||||||||||||||||||||||||| | ||| ||||||||||| |||||||||||| |||
Sbjct: 7 aagagagctctcttcagtccactctcagatgactgtagggttttattagctgccgattca 66
Query: 79 tccattcacctgccaagaaccatg 102
||||||||||| ||||||| ||||
Sbjct: 67 tccattcacctaccaagaatcatg 90
>40367_rco-MIR319a:mirbase
Length = 211
Score = 50.1 bits (25), Expect = 7e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 19 aagagagctctcttcagtccactctaaaatggctgtagggtttcattagctgccgactca 78
||||||||| |||||||||||||| |||| ||||| ||| ||||||||||||||||
Sbjct: 3 aagagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactca 62
Query: 79 t 79
|
Sbjct: 63 t 63
>40369_rco-MIR319c:mirbase
Length = 188
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 aagagagctctcttcagtccactc 42
||||||||||||||||||||||||
Sbjct: 3 aagagagctctcttcagtccactc 26
>41185_aqc-MIR319:mirbase
Length = 177
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 agagagctctcttcagtccactc 42
|||||||||||||||||||||||
Sbjct: 1 agagagctctcttcagtccactc 23
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 44.1 bits (22), Expect = 4e-05
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 18 gaagagagctctcttcagtccactctaaaatggctgtagggtttcattagctgccgactc 77
|||||||||| |||||||||||||| |||| ||||| || |||||||||||||||
Sbjct: 8 gaagagagctttcttcagtccactcatgggtggcagtaggattgaattagctgccgactc 67
Query: 78 at 79
||
Sbjct: 68 at 69
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 178 ttggactgaagggtgctcccttca 201
||||||||||||| ||||||||||
Sbjct: 151 ttggactgaagggagctcccttca 174
>42783_zma-MIR319d:mirbase
Length = 212
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 178 ttggactgaagggtgctccct 198
|||||||||||||||||||||
Sbjct: 174 ttggactgaagggtgctccct 194
>42781_zma-MIR319b:mirbase
Length = 213
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 178 ttggactgaagggtgctccct 198
|||||||||||||||||||||
Sbjct: 175 ttggactgaagggtgctccct 195
>42563_sbi-MIR319:mirbase
Length = 249
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 178 ttggactgaagggtgctccct 198
|||||||||||||||||||||
Sbjct: 191 ttggactgaagggtgctccct 211
>41995_osa-MIR319b:mirbase
Length = 197
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 178 ttggactgaagggtgctccct 198
|||||||||||||||||||||
Sbjct: 168 ttggactgaagggtgctccct 188
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 42.1 bits (21), Expect = 2e-04
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 19 aagagagctctcttcagtccactctaaaatggctgtagggtttcattagctgccgactca 78
||||||||| |||||||||||||| ||| ||||| ||| ||||||||||||||||
Sbjct: 9 aagagagctttcttcagtccactcatgggtggtagtaggatttaattagctgccgactca 68
Query: 79 t 79
|
Sbjct: 69 t 69
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 63 attagctgccgactcatccattca 86
||||||||||||||||| ||||||
Sbjct: 54 attagctgccgactcattcattca 77
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 63 attagctgccgactcatccattca 86
||||||||||||||||| ||||||
Sbjct: 56 attagctgccgactcattcattca 79
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 63 attagctgccgactcatccattca 86
||||||||||||||||| ||||||
Sbjct: 54 attagctgccgactcattcattca 77
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 aagagagctctcttcagtccactc 42
||||||||| ||||||||||||||
Sbjct: 9 aagagagctttcttcagtccactc 32
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 63 attagctgccgactcatccattca 86
||||||||||||||||| ||||||
Sbjct: 54 attagctgccgactcattcattca 77
>40464_gma-MIR319a:mirbase
Length = 207
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 aagagagctctcttcagtccactc 42
||||||||| ||||||||||||||
Sbjct: 19 aagagagctttcttcagtccactc 42
