miRNEST 2.0, an integrative microRNA resource :: BLAST
>41929_osa-MIR162a:mirbase
Length = 171
Score = 278 bits (140), Expect = 1e-75
Identities = 161/171 (94%)
Strand = Plus / Plus
Query: 2 ggtgatgcctgggcgcagtggtttatcgatcccttccctgccttgtggcgctgatccagg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgatgcctgggcgcagtggtttatcgatcccttccctgccttgtggcgctgatccagg 60
Query: 62 agcggcgaatttctttgagagggtgttcnnnnnnnnncttctttttggtccttgttgcag 121
|||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 61 agcggcgaatttctttgagagggtgttctttttttttcttccttttggtccttgttgcag 120
Query: 122 ccaacgacaacgcgggaatcgatcgataaacctctgcatccagttctcgcc 172
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccaacgacaacgcgggaatcgatcgataaacctctgcatccagttctcgcc 171
>41930_osa-MIR162b:mirbase
Length = 134
Score = 85.7 bits (43), Expect = 1e-17
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 2 ggtgatgcctgggcgcagtggtttatcgatcccttccctgccttgtg 48
||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3 ggtgatgcctgggcgcagtggtttatcgatctcttccctgccttgtg 49
Score = 60.0 bits (30), Expect = 6e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 128 acaacgcgggaatcgatcgataaacctctgcatccagttctc 169
||||||| ||||||||||||||| ||||||||||||| ||||
Sbjct: 88 acaacgcaggaatcgatcgataagcctctgcatccagatctc 129
>42502_sbi-MIR162:mirbase
Length = 127
Score = 73.8 bits (37), Expect = 4e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 128 acaacgcgggaatcgatcgataaacctctgcatccag 164
|||||||||||||||||||||||||||||||||||||
Sbjct: 91 acaacgcgggaatcgatcgataaacctctgcatccag 127
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 12 gggcgcagtggtttatcgatcccttccctgccttgtg 48
||||||||||||||||||||| ||||| |||||||||
Sbjct: 1 gggcgcagtggtttatcgatctcttccttgccttgtg 37
>41736_bdi-MIR162:mirbase
Length = 133
Score = 73.8 bits (37), Expect = 4e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 8 gcctgggcgcagtggtttatcgatcccttccctgccttgtg 48
|||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 gcctgggcgcagtggtttatcgatcctttccctgccttgtg 41
Score = 60.0 bits (30), Expect = 6e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 133 gcgggaatcgatcgataaacctctgcatcc 162
||||||||||||||||||||||||||||||
Sbjct: 100 gcgggaatcgatcgataaacctctgcatcc 129
>42708_zma-MIR162:mirbase
Length = 130
Score = 65.9 bits (33), Expect = 9e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 128 acaacgcgggaatcgatcgataaacctctgcatccag 164
||||||||||||||| |||||||||||||||||||||
Sbjct: 94 acaacgcgggaatcggtcgataaacctctgcatccag 130
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 10 ctgggcgcagtggtttatcgatcccttccctgccttgtg 48
||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1 ctgggcgcagtggtttatcgatctcttccttgccttgtg 39
>41220_csi-MIR162:mirbase
Length = 201
Score = 56.0 bits (28), Expect = 9e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 137 gaatcgatcgataaacctctgcatccag 164
||||||||||||||||||||||||||||
Sbjct: 154 gaatcgatcgataaacctctgcatccag 181
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 56.0 bits (28), Expect = 9e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 137 gaatcgatcgataaacctctgcatccag 164
||||||||||||||||||||||||||||
Sbjct: 87 gaatcgatcgataaacctctgcatccag 114
>40437_gma-MIR162:mirbase
Length = 102
Score = 56.0 bits (28), Expect = 9e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 137 gaatcgatcgataaacctctgcatccag 164
||||||||||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatccag 93
>40342_rco-MIR162:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 9e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 137 gaatcgatcgataaacctctgcatccag 164
||||||||||||||||||||||||||||
Sbjct: 69 gaatcgatcgataaacctctgcatccag 96
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 56.0 bits (28), Expect = 9e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 137 gaatcgatcgataaacctctgcatccag 164
||||||||||||||||||||||||||||
Sbjct: 73 gaatcgatcgataaacctctgcatccag 100
>40025_ath-MIR162b:mirbase
Length = 111
Score = 56.0 bits (28), Expect = 9e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 137 gaatcgatcgataaacctctgcatccag 164
||||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccag 99
>39813_aly-MIR162b:mirbase
Length = 184
Score = 56.0 bits (28), Expect = 9e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 137 gaatcgatcgataaacctctgcatccag 164
||||||||||||||||||||||||||||
Sbjct: 106 gaatcgatcgataaacctctgcatccag 133
>41530_sly-MIR162:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 136 ggaatcgatcgataaacctctgcatccag 164
||||||| |||||||||||||||||||||
Sbjct: 71 ggaatcggtcgataaacctctgcatccag 99
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 141 cgatcgataaacctctgcatccagt 165
|||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccagt 99
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 141 cgatcgataaacctctgcatccagt 165
|||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccagt 99
>41090_tcc-MIR162:mirbase
Length = 131
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 140 tcgatcgataaacctctgcatccag 164
|||||||||||||||||||||||||
Sbjct: 87 tcgatcgataaacctctgcatccag 111
>41578_vvi-MIR162:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 137 gaatcgatcgataaacctctgcatccag 164
|||||| |||||||||||||||||||||
Sbjct: 66 gaatcggtcgataaacctctgcatccag 93
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 141 cgatcgataaacctctgcatccag 164
||||||||||||||||||||||||
Sbjct: 75 cgatcgataaacctctgcatccag 98
>40663_mtr-MIR162:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 137 gaatcgatcgataaacctctgcatccag 164
|||||| |||||||||||||||||||||
Sbjct: 80 gaatcggtcgataaacctctgcatccag 107
>40024_ath-MIR162a:mirbase
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 137 gaatcgatcgataaacctctgcatccag 164
|||| |||||||||||||||||||||||
Sbjct: 82 gaatagatcgataaacctctgcatccag 109
>39812_aly-MIR162a:mirbase
Length = 228
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 137 gaatcgatcgataaacctctgcatccag 164
|||| |||||||||||||||||||||||
Sbjct: 129 gaatagatcgataaacctctgcatccag 156
