miRNEST 2.0, an integrative microRNA resource :: BLAST
>41999_osa-MIR393b:mirbase
Length = 132
Score = 254 bits (128), Expect = 1e-68
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 1 cctgaggaaactagtggaggactccaaagggatcgcattgatctggctagctatctcgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 cctgaggaaactagtggaggactccaaagggatcgcattgatctggctagctatctcgat 64
Query: 61 cgatcgcctcatcgatcgacgacgacgtgcgtgatcgatcagtgcaatccctttggaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cgatcgcctcatcgatcgacgacgacgtgcgtgatcgatcagtgcaatccctttggaatt 124
Query: 121 ttcctctt 128
||||||||
Sbjct: 125 ttcctctt 132
>41998_osa-MIR393b:mirbase
Length = 132
Score = 254 bits (128), Expect = 1e-68
Identities = 128/128 (100%)
Strand = Plus / Plus
Query: 1 cctgaggaaactagtggaggactccaaagggatcgcattgatctggctagctatctcgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 cctgaggaaactagtggaggactccaaagggatcgcattgatctggctagctatctcgat 64
Query: 61 cgatcgcctcatcgatcgacgacgacgtgcgtgatcgatcagtgcaatccctttggaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cgatcgcctcatcgatcgacgacgacgtgcgtgatcgatcagtgcaatccctttggaatt 124
Query: 121 ttcctctt 128
||||||||
Sbjct: 125 ttcctctt 132
>41775_bdi-MIR393b:mirbase
Length = 174
Score = 71.9 bits (36), Expect = 1e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 5 aggaaactagtggaggactccaaagggatcgcattgatct 44
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 24 aggaagctagtggaggactccaaagggatcgcattgatct 63
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 97 gatcagtgcaatccctttggaatt 120
||||||||||||||||||||||||
Sbjct: 118 gatcagtgcaatccctttggaatt 141
>42786_zma-MIR393a:mirbase
Length = 126
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 5 aggaaactagtggaggactccaaagggatcgcattgatct 44
||||| || |||||||||||||||||||||||||||||||
Sbjct: 3 aggaagctggtggaggactccaaagggatcgcattgatct 42
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 97 gatcagtgcaatccctttggaattttcc 124
||||||||||||||||||||||||||||
Sbjct: 87 gatcagtgcaatccctttggaattttcc 114
>42788_zma-MIR393c:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 ctccaaagggatcgcattgatct 44
|||||||||||||||||||||||
Sbjct: 1 ctccaaagggatcgcattgatct 23
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 99 tcagtgcaatccctttggaatt 120
||||||||||||||||||||||
Sbjct: 76 tcagtgcaatccctttggaatt 97
>41133_tcc-MIR393b:mirbase
Length = 158
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 ctccaaagggatcgcattgatct 44
|||||||||||||||||||||||
Sbjct: 20 ctccaaagggatcgcattgatct 42
>41054_ghr-MIR393:mirbase
Length = 139
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 ctccaaagggatcgcattgatct 44
|||||||||||||||||||||||
Sbjct: 10 ctccaaagggatcgcattgatct 32
>42567_sbi-MIR393b:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatct 44
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatct 22
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 97 gatcagtgcaatccctttggaa 118
||||||||||||||||||||||
Sbjct: 63 gatcagtgcaatccctttggaa 84
>41420_ptc-MIR393d:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatct 44
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatct 32
>41419_ptc-MIR393c:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatct 44
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatct 32
>41132_tcc-MIR393a:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 actagtggaggactccaaagggatcgcattgatc 43
||||| ||||| |||||||||||||||||||||
Sbjct: 8 actagaggaggcatccaaagggatcgcattgatc 41
>40373_rco-MIR393:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatct 44
||||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatct 27
>42787_zma-MIR393b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatc 22
>42566_sbi-MIR393:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 20 tccaaagggatcgcattgatc 40
>41997_osa-MIR393:mirbase
Length = 115
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41774_bdi-MIR393a:mirbase
Length = 159
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 36 tccaaagggatcgcattgatc 56
>41642_vvi-MIR393b:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41641_vvi-MIR393a:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41418_ptc-MIR393b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41417_ptc-MIR393a:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41238_csi-MIR393:mirbase
Length = 145
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>40707_mtr-MIR393b:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatc 26
>40706_mtr-MIR393:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>40470_gma-MIR393:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>40295_bna-MIR393:mirbase
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>40076_ath-MIR393b:mirbase
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>40075_ath-MIR393a:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>39866_aly-MIR393b:mirbase
Length = 169
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 18 tccaaagggatcgcattgatc 38
>39865_aly-MIR393a:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 tccaaagggatcgcattgatc 43
|||||||||||||||||||||
Sbjct: 18 tccaaagggatcgcattgatc 38
