miRNEST 2.0, an integrative microRNA resource :: BLAST
>49027_osa-miR806d:pmrd
Length = 271
Score = 287 bits (145), Expect = 2e-78
Identities = 205/228 (89%)
Strand = Plus / Minus
Query: 10 tactccctccgtttaaaaatatttgacaccgttgactttttagcacatgtttgaccgttt 69
|||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tactccctccgttttaaaatgtttgacaccgttgactttttagcacatgtttgaccgtta 195
Query: 70 gtcttattnnnnnnnnnttgtgaaatatgtaaaactatatgtgtacataaaagtatattt 129
|||||||| |||||||||||||||||||||||||| | || |||||||||||
Sbjct: 194 gtcttattctaaaaaaattgtgaaatatgtaaaactatatgtgcatatgaaagtatattt 135
Query: 130 aacgatgaatcaaatgatatgaaaagaataaataattacttaaattttttgaataagatg 189
||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| | |
Sbjct: 134 aacaatgaatcaaatgatatgaaaagaataaataattatttaaattttttgaataaaacg 75
Query: 190 aatggtcaaacatgtactaaaaaatcaacggtgtcaaacattttgaaa 237
|||||||||||| ||| |||||| |||||||| |||||||||||||||
Sbjct: 74 aatggtcaaacacgtattaaaaactcaacggtatcaaacattttgaaa 27
Score = 91.7 bits (46), Expect = 2e-19
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 174 ttttttgaataagatgaatggtcaaacatgtactaaaaaatcaacggtgtcaaacatttt 233
||||| |||||||| || |||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 180 tttttagaataagactaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 239
Query: 234 gaaacggaggtagtataa 251
||||||||| |||||||
Sbjct: 240 aaaacggagggagtataa 257
>49030_osa-miR806g:pmrd
Length = 240
Score = 278 bits (140), Expect = 2e-75
Identities = 210/235 (89%), Gaps = 1/235 (0%)
Strand = Plus / Minus
Query: 10 tactccctccgtttaaaaatatttgacaccgttgactttttagcacatgtttgaccgttt 69
|||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tactccctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgttc 181
Query: 70 gtcttattnnnnnnnnnttgtgaaatatgtaaaactatatgtgtacataaaagtatattt 129
|||||||| | |||||||||||||||||| |||||||||| |||||||||||
Sbjct: 180 gtcttattcaaaaaagttagtgaaatatgtaaaactacatgtgtacatgaaagtatattt 121
Query: 130 aacgatgaatcaaatgatatgaaaagaataaataattacttaaatttttt-gaataagat 188
||| |||||||||||||||| |||||||||||||||||||||| |||||| |||||| |
Sbjct: 120 aacaatgaatcaaatgatataaaaagaataaataattacttaatttttttggaataaaac 61
Query: 189 gaatggtcaaacatgtactaaaaaatcaacggtgtcaaacattttgaaacggagg 243
||||| ||||||| |||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 60 gaatgatcaaacacgtactaaaaagtcagcggtgtcaaacattttgaaacggagg 6
Score = 109 bits (55), Expect = 1e-24
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 174 ttttttgaataagatgaatggtcaaacatgtactaaaaaatcaacggtgtcaaacatttt 233
|||||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttt 225
Query: 234 gaaacggaggtagta 248
|||||||||| ||||
Sbjct: 226 gaaacggagggagta 240
Score = 63.9 bits (32), Expect = 6e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 12 ctccctccgtttaaaaatatttgacaccgttgactttttagcacatgtttga 63
|||||||||||| ||||| |||||||||| ||||||||||| || |||||||
Sbjct: 3 ctccctccgtttcaaaatgtttgacaccgctgactttttagtacgtgtttga 54
>49026_osa-miR806c:pmrd
Length = 270
Score = 278 bits (140), Expect = 2e-75
Identities = 212/239 (88%)
Strand = Plus / Minus
Query: 10 tactccctccgtttaaaaatatttgacaccgttgactttttagcacatgtttgaccgttt 69
|||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 256 tactccatccgtttcgaaatgtttgacaccgttgactttttagcacatgtttgaccattc 197
Query: 70 gtcttattnnnnnnnnnttgtgaaatatgtaaaactatatgtgtacataaaagtatattt 129
|||||||| || |||||||||||||||||||||||||||| |||||||||||
Sbjct: 196 gtcttattcaaaaaattttatgaaatatgtaaaactatatgtgtacatgaaagtatattt 137
Query: 130 aacgatgaatcaaatgatatgaaaagaataaataattacttaaattttttgaataagatg 189
||| || ||||||| |||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 136 aacaataaatcaaacgatatgaaaaaaataaataattacttaaattttttgaataagacg 77
Query: 190 aatggtcaaacatgtactaaaaaatcaacggtgtcaaacattttgaaacggaggtagta 248
|||| ||||| | |||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 76 aatgatcaaatacgtactaaaaagtcaacggtgtcaaacattttgaaacggagggagta 18
Score = 109 bits (55), Expect = 1e-24
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 171 aaattttttgaataagatgaatggtcaaacatgtactaaaaaatcaacggtgtcaaacat 230
||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
Query: 231 tttgaaacgga 241
|| ||||||||
Sbjct: 239 ttcgaaacgga 249
Score = 71.9 bits (36), Expect = 2e-13
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 10 tactccctccgtttaaaaatatttgacaccgttgactttttagcacatgtttgaccgttt 69
|||||||||||||| ||||| |||||||||||||||||||||| || | ||||| | ||
Sbjct: 18 tactccctccgtttcaaaatgtttgacaccgttgactttttagtacgtatttgatcattc 77
Query: 70 gtcttatt 77
||||||||
Sbjct: 78 gtcttatt 85
>49024_osa-miR806a:pmrd
Length = 252
Score = 276 bits (139), Expect = 8e-75
Identities = 211/234 (90%), Gaps = 3/234 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgtttaaaaatatttgacaccgttgactttttagcacatgtttgaccgttt 69
|||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 246 tactccctccgttttaaaatgtttgacaccgttgactttttagcacatgtttaaccgttc 187
Query: 70 gtcttattnnnnnnnnnttgtgaaatatgtaaaactatatgtgtacataaaagtatattt 129
|||||||| || ||||||| |||||||||||||||||||| |||||||||||
Sbjct: 186 gtcttattaaatttttttt-tgaaatacgtaaaactatatgtgtacatgaaagtatattt 128
Query: 130 aacgatgaatcaaatgatatgaaaagaataaataattacttaaattttttgaataagatg 189
||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 127 aacaatgaatcaaatg-tatgaaaagaataaataattacttaaattttttgaataagacg 69
Query: 190 aatggtcaaacatgta-ctaaaaaatcaacggtgtcaaacattttgaaacggag 242
|||||||||||| ||| |||||| |||||||||||||||||||||||||||||
Sbjct: 68 aatggtcaaacacgtatttaaaaagtcaacggtgtcaaacattttgaaacggag 15
Score = 81.8 bits (41), Expect = 2e-16
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 181 aataagatgaatggtcaaacatgtactaaaaaatcaacggtgtcaaacattttgaaacgg 240
||||||| ||| ||| |||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattttaaaacgg 238
Query: 241 aggtagtat 249
||| |||||
Sbjct: 239 agggagtat 247
Score = 60.0 bits (30), Expect = 9e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 10 tactccctccgtttaaaaatatttgacaccgttgacttttta 51
||||| |||||||| ||||| |||||||||||||||||||||
Sbjct: 9 tactctctccgtttcaaaatgtttgacaccgttgacttttta 50
>49028_osa-miR806e:pmrd
Length = 255
Score = 262 bits (132), Expect = 1e-70
Identities = 204/231 (88%)
Strand = Plus / Minus
Query: 11 actccctccgtttaaaaatatttgacaccgttgactttttagcacatgtttgaccgtttg 70
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 246 actccctccgtttcgaaatatttgacaccgttgactttttagcacatgtttgaccgttcg 187
Query: 71 tcttattnnnnnnnnnttgtgaaatatgtaaaactatatgtgtacataaaagtatattta 130
||||||| ||||||||||||||||| |||||| ||||||||| ||||||||
Sbjct: 186 tcttatttaaaaacttttgtgaaatatgtaaaattatatgcctacataaaaatatattta 127
Query: 131 acgatgaatcaaatgatatgaaaagaataaataattacttaaattttttgaataagatga 190
|| || ||| |||||||| ||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 126 acaataaattaaatgataagaaaagaattaataattacttaaattttttgaataagacga 67
Query: 191 atggtcaaacatgtactaaaaaatcaacggtgtcaaacattttgaaacgga 241
| |||||||||| | ||||||| ||||||| ||||||||||||||||||||
Sbjct: 66 acggtcaaacatatgctaaaaagtcaacggcgtcaaacattttgaaacgga 16
Score = 87.7 bits (44), Expect = 4e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 10 tactccctccgtttaaaaatatttgacaccgttgactttttagcacatgtttgaccgttt 69
|||||| ||||||| ||||| |||||| ||||||||||||||||| |||||||||||||
Sbjct: 9 tactccatccgtttcaaaatgtttgacgccgttgactttttagcatatgtttgaccgttc 68
Query: 70 gtcttatt 77
||||||||
Sbjct: 69 gtcttatt 76
Score = 81.8 bits (41), Expect = 2e-16
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 175 tttttgaataagatgaatggtcaaacatgtactaaaaaatcaacggtgtcaaacattttg 234
||||| ||||||| ||| |||||||||||| ||||||| |||||||||||||| |||| |
Sbjct: 174 tttttaaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaatatttcg 233
Query: 235 aaacggagg 243
|||||||||
Sbjct: 234 aaacggagg 242
>49031_osa-miR806h:pmrd
Length = 271
Score = 242 bits (122), Expect = 1e-64
Identities = 209/241 (86%)
Strand = Plus / Minus
Query: 8 actactccctccgtttaaaaatatttgacaccgttgactttttagcacatgtttgaccgt 67
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 254 actactccctccgtttctaaatgtttgacaccgttgactttttagcacatgtttgaccat 195
Query: 68 ttgtcttattnnnnnnnnnttgtgaaatatgtaaaactatatgtgtacataaaagtatat 127
| |||||||| |||||| |||||||||| |||||| ||||||||| |||||
Sbjct: 194 tcgtcttattcaaaaacttttgtgagatatgtaaaattatatgcctacataaaaatatat 135
Query: 128 ttaacgatgaatcaaatgatatgaaaagaataaataattacttaaattttttgaataaga 187
||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 134 ttaacaatgaatcaaatgataggaaaagaattaataattacttaaattttttgaataaga 75
Query: 188 tgaatggtcaaacatgtactaaaaaatcaacggtgtcaaacattttgaaacggaggtagt 247
||| |||||||||| | |||||| ||||||| || |||||||| |||||||||| |||
Sbjct: 74 cgaacggtcaaacatatgataaaaagtcaacggcgttaaacatttcgaaacggagggagt 15
Query: 248 a 248
|
Sbjct: 14 a 14
Score = 107 bits (54), Expect = 4e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 175 tttttgaataagatgaatggtcaaacatgtactaaaaaatcaacggtgtcaaacattttg 234
||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||| |
Sbjct: 179 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatttag 238
Query: 235 aaacggaggtagta 248
||||||||| ||||
Sbjct: 239 aaacggagggagta 252
Score = 71.9 bits (36), Expect = 2e-13
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 10 tactccctccgtttaaaaatatttgacaccgttgactttttagcacatgtttgaccgttt 69
|||||||||||||| |||| ||| || |||||||||||||| || |||||||||||||
Sbjct: 14 tactccctccgtttcgaaatgtttaacgccgttgactttttatcatatgtttgaccgttc 73
Query: 70 gtcttatt 77
||||||||
Sbjct: 74 gtcttatt 81
>49025_osa-miR806b:pmrd
Length = 215
Score = 230 bits (116), Expect = 4e-61
Identities = 184/207 (88%), Gaps = 2/207 (0%)
Strand = Plus / Minus
Query: 31 tttgacaccgttgactttttagcacatgtttgaccgtttgtcttattnnnnnnnnnttgt 90
||||||||||||||||||||||||||| ||||| ||| |||||||| ||||
Sbjct: 207 tttgacaccgttgactttttagcacattcttgactgttcgtcttattaaaaaaaatttgt 148
Query: 91 gaaatatgtaaaactatatgtgtacataaaagtatatttaacgatgaatcaaatgatatg 150
||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 147 gaaatatgtaaaattatatgtgtacatgaaagtatatttaacaatgaatcaaatgatata 88
Query: 151 aaaagaataaataattacttaaatt-ttttgaataagatgaatggtcaaacatgtac-ta 208
||||||||||||||||||||||||| |||||||||||| |||| |||||||| |||| ||
Sbjct: 87 aaaagaataaataattacttaaatttttttgaataagacgaatagtcaaacacgtactta 28
Query: 209 aaaaatcaacggtgtcaaacattttga 235
|||| ||||||||||||||||||||||
Sbjct: 27 aaaagtcaacggtgtcaaacattttga 1
Score = 52.0 bits (26), Expect = 2e-07
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 174 ttttttgaataagatgaatggtcaaacatgtactaaaaaatcaacggtgtcaaacatttt 233
|||||| ||||||| ||| ||||| |||| ||||||| |||||||||||||||| |||
Sbjct: 154 tttttttaataagacgaacagtcaagaatgtgctaaaaagtcaacggtgtcaaacagttt 213
Query: 234 ga 235
||
Sbjct: 214 ga 215
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 aaaatatttgacaccgttgacttttta 51
||||| |||||||||||||||||||||
Sbjct: 3 aaaatgtttgacaccgttgacttttta 29
>49029_osa-miR806f:pmrd
Length = 241
Score = 208 bits (105), Expect = 2e-54
Identities = 204/240 (85%)
Strand = Plus / Minus
Query: 10 tactccctccgtttaaaaatatttgacaccgttgactttttagcacatgtttgaccgttt 69
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 240 tactccctccgtttcgaaatatttgacaccgttgactttttagcacatgtttgactgttc 181
Query: 70 gtcttattnnnnnnnnnttgtgaaatatgtaaaactatatgtgtacataaaagtatattt 129
|||||||| || |||||||||||||| |||||| ||||| ||| |||||||
Sbjct: 180 gtcttattcaaaaacttttatgaaatatgtaaaattatatgcctacatgaaaatatattt 121
Query: 130 aacgatgaatcaaatgatatgaaaagaataaataattacttaaattttttgaataagatg 189
||| ||||||||||||||| ||||||||| | ||| | ||||||||||||||||| |
Sbjct: 120 aacaatgaatcaaatgataggaaaagaattattaagtgtcaaaattttttgaataagacg 61
Query: 190 aatggtcaaacatgtactaaaaaatcaacggtgtcaaacattttgaaacggaggtagtat 249
|| ||||||||||||| |||||| ||||||| |||||||||| |||||||||| |||||
Sbjct: 60 aacggtcaaacatgtaataaaaagtcaacggcgtcaaacattccgaaacggagggagtat 1
Score = 85.7 bits (43), Expect = 2e-17
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 175 tttttgaataagatgaatggtcaaacatgtactaaaaaatcaacggtgtcaaacattttg 234
||||||||||||| ||| ||||||||||| ||||||| |||||||||||||| |||| |
Sbjct: 167 tttttgaataagacgaacagtcaaacatgtgctaaaaagtcaacggtgtcaaatatttcg 226
Query: 235 aaacggaggtagtat 249
||||||||| |||||
Sbjct: 227 aaacggagggagtat 241
Score = 71.9 bits (36), Expect = 2e-13
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 10 tactccctccgtttaaaaatatttgacaccgttgactttttagcacatgtttgaccgttt 69
|||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||
Sbjct: 2 tactccctccgtttcggaatgtttgacgccgttgactttttattacatgtttgaccgttc 61
Query: 70 gtcttatt 77
||||||||
Sbjct: 62 gtcttatt 69
>48799_oru-miR806:pmrd
Length = 242
Score = 141 bits (71), Expect = 3e-34
Identities = 174/210 (82%), Gaps = 1/210 (0%)
Strand = Plus / Minus
Query: 26 aaatatttgacaccgttgactttttagcacatgtttgaccgtttgtcttattnnnnnnnn 85
||||||||||| ||||||| |||| ||||||||||||||| ||||||||
Sbjct: 225 aaatatttgacgccgttgatatttttaaacatgtttgaccgttcgtcttattcaaaaatt 166
Query: 86 nttgtgaaatatgtaaaactatatgtgtacataaaagtatatttaacgatgaatcaaatg 145
||||||||||| ||||||||||||| || ||||||||||||||||| || |||||||||
Sbjct: 165 tttgtgaaatatataaaactatatgtatatataaaagtatatttaacaataaatcaaatg 106
Query: 146 atatgaaaagaataaataattacttaaatt-ttttgaataagatgaatggtcaaacatgt 204
||| |||| |||| | |||||||||||||| |||||||||||| ||| ||||||| || |
Sbjct: 105 ataggaaaggaattattaattacttaaatttttttgaataagacgaacggtcaaatatat 46
Query: 205 actaaaaaatcaacggtgtcaaacattttg 234
||||| ||||||| |||||| ||||||
Sbjct: 45 ttaaaaaagtcaacggcgtcaaatattttg 16
Score = 54.0 bits (27), Expect = 5e-08
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 175 tttttgaataagatgaatggtcaaacatgtactaaaaaatcaacggtgtcaaacattttg 234
||||||||||||| ||| |||||||||||| |||| |||||||| |||||| |||| |
Sbjct: 168 tttttgaataagacgaacggtcaaacatgtttaaaaatatcaacggcgtcaaatatttag 227
Query: 235 aaacggaggtagtat 249
| |||||||||||
Sbjct: 228 ggaaggaggtagtat 242
Score = 50.1 bits (25), Expect = 8e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 25 aaaatatttgacaccgttgactttttagcacatgtttgaccgtttgtcttatt 77
|||||||||||| ||||||||||||| | || |||||||||| ||||||||
Sbjct: 17 aaaatatttgacgccgttgacttttttaaatatatttgaccgttcgtcttatt 69
>48794_oni-miR812:pmrd
Length = 172
Score = 63.9 bits (32), Expect = 6e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 161 ataattacttaaattttttgaataagatgaatggtcaaacatgt 204
|||||||| |||| ||||||||||||| ||||||||||||||||
Sbjct: 118 ataattacataaagtttttgaataagacgaatggtcaaacatgt 161
Score = 40.1 bits (20), Expect = 8e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 165 ttacttaaattttttgaataagatgaatggtcaaacatgt 204
|||| |||| ||||| ||||| | ||||||||||||||||
Sbjct: 51 ttacataaaatttttaaataaaacgaatggtcaaacatgt 12
>49189_osa-miR1884a:pmrd
Length = 214
Score = 61.9 bits (31), Expect = 2e-10
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 174 ttttttgaataagatgaatggtcaaacatgtactaaaaaatcaacggtgtcaaacatttt 233
||||||||||||||||||||||||||| | ||||| |||||||||||| |||||||
Sbjct: 152 ttttttgaataagatgaatggtcaaacgttatgcaaaaagtcaacggtgtcatacatttt 211
Query: 234 gaa 236
|||
Sbjct: 212 gaa 214
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 175 tttttgaataagatgaatggtcaaac 200
||||||||||||| ||||||||||||
Sbjct: 61 tttttgaataagacgaatggtcaaac 36
>49081_osa-miR819j:pmrd
Length = 175
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 233 tgaaacggaggtagtataaaag 254
||||||||||||||||||||||
Sbjct: 28 tgaaacggaggtagtataaaag 7
>49190_osa-miR1884b:pmrd
Length = 221
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 21 tttaaaaatatttgacaccgttgactttt 49
|||| |||||| |||||||||||||||||
Sbjct: 217 tttataaatatatgacaccgttgactttt 189
>49422_osa-miRf10207-akr:pmrd
Length = 165
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 174 ttttttgaataagatgaatggtcaaaca 201
|||||||||||||| || ||||||||||
Sbjct: 127 ttttttgaataagacgagtggtcaaaca 154
>48793_obt-miR812:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 58 gtttgaccgtttgtcttatt 77
||||||||||||||||||||
Sbjct: 160 gtttgaccgtttgtcttatt 141
