miRNEST 2.0, an integrative microRNA resource :: BLAST
>49031_osa-miR806h:pmrd
Length = 271
Score = 319 bits (161), Expect = 7e-88
Identities = 220/237 (92%), Gaps = 2/237 (0%)
Strand = Plus / Minus
Query: 28 ccctccgtttcagaatgtttgacaccgttgactttttaacacatgtttaaccgttcgtct 87
||||||||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||
Sbjct: 248 ccctccgtttctaaatgtttgacaccgttgactttttagcacatgtttgaccattcgtct 189
Query: 88 tgttcaaaaacttttgtgaaatatgtaaaattatatgcctacataaaaatatatttagca 147
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 188 tattcaaaaacttttgtgagatatgtaaaattatatgcctacataaaaatatatttaaca 129
Query: 148 atgaatcaaatgatagaaaaagaattaataattacttaaattctttcgaataagacgaac 207
|||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 128 atgaatcaaatgataggaaaagaattaataattacttaaatt-ttttgaataagacgaac 70
Query: 208 ggtcaaaccatgtgctaaaaagtcaacggcgtcagacatttcgaaacggagtgagta 264
||||||| ||| || ||||||||||||||||| | |||||||||||||||| |||||
Sbjct: 69 ggtcaaa-catatgataaaaagtcaacggcgttaaacatttcgaaacggagggagta 14
Score = 83.8 bits (42), Expect = 7e-17
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 195 gaataagacgaacggtcaaaccatgtgctaaaaagtcaacggcgtcagacatttcgaaac 254
|||||||||||| |||||||| |||||||||||||||||||| |||| |||||| |||||
Sbjct: 184 gaataagacgaatggtcaaac-atgtgctaaaaagtcaacggtgtcaaacatttagaaac 242
Query: 255 ggagtgagta 264
|||| |||||
Sbjct: 243 ggagggagta 252
Score = 75.8 bits (38), Expect = 2e-14
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 28 ccctccgtttcagaatgtttgacaccgttgactttttaacacatgtttaaccgttcgtct 87
||||||||||| ||||||| || |||||||||||||| || |||||| |||||||||||
Sbjct: 18 ccctccgtttcgaaatgtttaacgccgttgactttttatcatatgtttgaccgttcgtct 77
Query: 88 tgttcaaaaa 97
| ||||||||
Sbjct: 78 tattcaaaaa 87
>49028_osa-miR806e:pmrd
Length = 255
Score = 297 bits (150), Expect = 2e-81
Identities = 212/230 (92%), Gaps = 2/230 (0%)
Strand = Plus / Minus
Query: 28 ccctccgtttcagaatgtttgacaccgttgactttttaacacatgtttaaccgttcgtct 87
||||||||||| ||| ||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 243 ccctccgtttcgaaatatttgacaccgttgactttttagcacatgtttgaccgttcgtct 184
Query: 88 tgttcaaaaacttttgtgaaatatgtaaaattatatgcctacataaaaatatatttagca 147
| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 183 tatttaaaaacttttgtgaaatatgtaaaattatatgcctacataaaaatatatttaaca 124
Query: 148 atgaatcaaatgatagaaaaagaattaataattacttaaattctttcgaataagacgaac 207
|| ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 123 ataaattaaatgataagaaaagaattaataattacttaaatt-ttttgaataagacgaac 65
Query: 208 ggtcaaaccatgtgctaaaaagtcaacggcgtcagacatttcgaaacgga 257
||||||| ||| |||||||||||||||||||||| |||||| ||||||||
Sbjct: 64 ggtcaaa-catatgctaaaaagtcaacggcgtcaaacattttgaaacgga 16
Score = 87.7 bits (44), Expect = 4e-18
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 196 aataagacgaacggtcaaaccatgtgctaaaaagtcaacggcgtcagacatttcgaaacg 255
|||||||||||||||||||| |||||||||||||||||||| |||| | |||||||||||
Sbjct: 180 aataagacgaacggtcaaac-atgtgctaaaaagtcaacggtgtcaaatatttcgaaacg 238
Query: 256 gagtgagt 263
||| ||||
Sbjct: 239 gagggagt 246
Score = 85.7 bits (43), Expect = 2e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 31 tccgtttcagaatgtttgacaccgttgactttttaacacatgtttaaccgttcgtcttgt 90
||||||||| |||||||||| |||||||||||||| || |||||| |||||||||||| |
Sbjct: 16 tccgtttcaaaatgtttgacgccgttgactttttagcatatgtttgaccgttcgtcttat 75
Query: 91 tcaaaaa 97
|||||||
Sbjct: 76 tcaaaaa 82
>49029_osa-miR806f:pmrd
Length = 241
Score = 260 bits (131), Expect = 5e-70
Identities = 217/243 (89%), Gaps = 2/243 (0%)
Strand = Plus / Minus
Query: 23 ataccccctccgtttcagaatgtttgacaccgttgactttttaacacatgtttaaccgtt 82
|||| ||||||||||| ||| ||||||||||||||||||||| ||||||||| || |||
Sbjct: 241 atactccctccgtttcgaaatatttgacaccgttgactttttagcacatgtttgactgtt 182
Query: 83 cgtcttgttcaaaaacttttgtgaaatatgtaaaattatatgcctacataaaaatatatt 142
|||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 181 cgtcttattcaaaaacttttatgaaatatgtaaaattatatgcctacatgaaaatatatt 122
Query: 143 tagcaatgaatcaaatgatagaaaaagaattaataattacttaaattctttcgaataaga 202
|| |||||||||||||||||| |||||||||| ||| | | ||| | ||| ||||||||
Sbjct: 121 taacaatgaatcaaatgataggaaaagaattattaagt-gtcaaaattttttgaataaga 63
Query: 203 cgaacggtcaaaccatgtgctaaaaagtcaacggcgtcagacatttcgaaacggagtgag 262
|||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||| |||
Sbjct: 62 cgaacggtcaaa-catgtaataaaaagtcaacggcgtcaaacattccgaaacggagggag 4
Query: 263 tat 265
|||
Sbjct: 3 tat 1
Score = 97.6 bits (49), Expect = 5e-21
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 23 ataccccctccgtttcagaatgtttgacaccgttgactttttaacacatgtttaaccgtt 82
|||| ||||||||||| ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 1 atactccctccgtttcggaatgtttgacgccgttgactttttattacatgtttgaccgtt 60
Query: 83 cgtcttgttcaaaaacttttg 103
|||||| |||||||| |||||
Sbjct: 61 cgtcttattcaaaaaattttg 81
Score = 85.7 bits (43), Expect = 2e-17
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 195 gaataagacgaacggtcaaaccatgtgctaaaaagtcaacggcgtcagacatttcgaaac 254
||||||||||||| ||||||| |||||||||||||||||||| |||| | ||||||||||
Sbjct: 172 gaataagacgaacagtcaaac-atgtgctaaaaagtcaacggtgtcaaatatttcgaaac 230
Query: 255 ggagtgagtat 265
|||| ||||||
Sbjct: 231 ggagggagtat 241
>49030_osa-miR806g:pmrd
Length = 240
Score = 220 bits (111), Expect = 5e-58
Identities = 202/231 (87%), Gaps = 1/231 (0%)
Strand = Plus / Minus
Query: 28 ccctccgtttcagaatgtttgacaccgttgactttttaacacatgtttaaccgttcgtct 87
|||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 236 ccctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgttcgtct 177
Query: 88 tgttcaaaaacttttgtgaaatatgtaaaattatatgcctacataaaaatatatttagca 147
| |||||||| || ||||||||||||||| || ||| ||||| ||| |||||||| ||
Sbjct: 176 tattcaaaaaagttagtgaaatatgtaaaactacatgtgtacatgaaagtatatttaaca 117
Query: 148 atgaatcaaatgatagaaaaagaattaataattacttaaattctttcgaataagacgaac 207
||||||||||||||| ||||||||| ||||||||||||| || ||| |||||| |||||
Sbjct: 116 atgaatcaaatgatataaaaagaataaataattacttaatttttttggaataaaacgaat 57
Query: 208 ggtcaaaccatgtgctaaaaagtcaacggcgtcagacatttcgaaacggag 258
| ||||| || || ||||||||||| ||| |||| |||||| |||||||||
Sbjct: 56 gatcaaa-cacgtactaaaaagtcagcggtgtcaaacattttgaaacggag 7
Score = 91.7 bits (46), Expect = 3e-19
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 195 gaataagacgaacggtcaaaccatgtgctaaaaagtcaacggcgtcagacatttcgaaac 254
||||||||||||||||||||| |||||||||||||||||||| |||| |||||| |||||
Sbjct: 172 gaataagacgaacggtcaaac-atgtgctaaaaagtcaacggtgtcaaacattttgaaac 230
Query: 255 ggagtgagta 264
|||| |||||
Sbjct: 231 ggagggagta 240
Score = 60.0 bits (30), Expect = 1e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 28 ccctccgtttcagaatgtttgacaccgttgacttttta 65
|||||||||||| |||||||||||||| ||||||||||
Sbjct: 5 ccctccgtttcaaaatgtttgacaccgctgacttttta 42
>49026_osa-miR806c:pmrd
Length = 270
Score = 194 bits (98), Expect = 3e-50
Identities = 202/234 (86%), Gaps = 2/234 (0%)
Strand = Plus / Minus
Query: 31 tccgtttcagaatgtttgacaccgttgactttttaacacatgtttaaccgttcgtcttgt 90
|||||||| ||||||||||||||||||||||||| ||||||||| ||| |||||||| |
Sbjct: 249 tccgtttcgaaatgtttgacaccgttgactttttagcacatgtttgaccattcgtcttat 190
Query: 91 tcaaaaacttttgtgaaatatgtaaaattatatgcctacataaaaatatatttagcaatg 150
||||||| |||| |||||||||||||| |||||| ||||| ||| |||||||| ||||
Sbjct: 189 tcaaaaaattttatgaaatatgtaaaactatatgtgtacatgaaagtatatttaacaata 130
Query: 151 aatcaaatgatagaaaaagaattaataattacttaaattctttcgaataagacgaacggt 210
||||||| |||| |||| ||| |||||||||||||||| ||| |||||||||||| | |
Sbjct: 129 aatcaaacgatatgaaaaaaataaataattacttaaatt-ttttgaataagacgaatgat 71
Query: 211 caaaccatgtgctaaaaagtcaacggcgtcagacatttcgaaacggagtgagta 264
|||| | || ||||||||||||||| |||| |||||| ||||||||| |||||
Sbjct: 70 caaa-tacgtactaaaaagtcaacggtgtcaaacattttgaaacggagggagta 18
Score = 85.7 bits (43), Expect = 2e-17
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 195 gaataagacgaacggtcaaaccatgtgctaaaaagtcaacggcgtcagacatttcgaaac 254
|||||||||||| |||||||| |||||||||||||||||||| |||| ||||||||||||
Sbjct: 188 gaataagacgaatggtcaaac-atgtgctaaaaagtcaacggtgtcaaacatttcgaaac 246
Query: 255 gga 257
|||
Sbjct: 247 gga 249
Score = 67.9 bits (34), Expect = 4e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 28 ccctccgtttcagaatgtttgacaccgttgacttttta 65
|||||||||||| |||||||||||||||||||||||||
Sbjct: 22 ccctccgtttcaaaatgtttgacaccgttgacttttta 59
>49025_osa-miR806b:pmrd
Length = 215
Score = 188 bits (95), Expect = 2e-48
Identities = 181/207 (87%), Gaps = 2/207 (0%)
Strand = Plus / Minus
Query: 43 tgtttgacaccgttgactttttaacacatgtttaaccgttcgtcttgttcaaaaactttt 102
||||||||||||||||||||||| ||||| || || ||||||||| || ||||| |||
Sbjct: 209 tgtttgacaccgttgactttttagcacattcttgactgttcgtcttattaaaaaaaattt 150
Query: 103 gtgaaatatgtaaaattatatgcctacataaaaatatatttagcaatgaatcaaatgata 162
|||||||||||||||||||||| ||||| ||| |||||||| |||||||||||||||||
Sbjct: 149 gtgaaatatgtaaaattatatgtgtacatgaaagtatatttaacaatgaatcaaatgata 90
Query: 163 gaaaaagaattaataattacttaaattctttcgaataagacgaacggtcaaaccatgtgc 222
||||||||| |||||||||||||||| ||| |||||||||||| |||||| || || |
Sbjct: 89 taaaaagaataaataattacttaaatttttttgaataagacgaatagtcaaa-cacgtac 31
Query: 223 -taaaaagtcaacggcgtcagacattt 248
|||||||||||||| |||| ||||||
Sbjct: 30 ttaaaaagtcaacggtgtcaaacattt 4
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 41 aatgtttgacaccgttgactttttaa 66
||||||||||||||||||||||||||
Sbjct: 5 aatgtttgacaccgttgactttttaa 30
Score = 44.1 bits (22), Expect = 6e-05
Identities = 41/46 (89%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 196 aataagacgaacggtcaaaccatgtgctaaaaagtcaacggcgtca 241
|||||||||||| ||||| |||||||||||||||||||| ||||
Sbjct: 161 aataagacgaacagtcaaga-atgtgctaaaaagtcaacggtgtca 205
>49024_osa-miR806a:pmrd
Length = 252
Score = 182 bits (92), Expect = 1e-46
Identities = 211/244 (86%), Gaps = 5/244 (2%)
Strand = Plus / Minus
Query: 23 ataccccctccgtttcagaatgtttgacaccgttgactttttaacacatgtttaaccgtt 82
|||| |||||||||| | ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 247 atactccctccgttttaaaatgtttgacaccgttgactttttagcacatgtttaaccgtt 188
Query: 83 cgtcttgttcaaaaacttttgtgaaatatgtaaaattatatgcctacataaaaatatatt 142
|||||| || ||| |||| ||||||| |||||| |||||| ||||| ||| ||||||
Sbjct: 187 cgtcttatt-aaatttttttttgaaatacgtaaaactatatgtgtacatgaaagtatatt 129
Query: 143 tagcaatgaatcaaatgatagaaaaagaattaataattacttaaattctttcgaataaga 202
|| |||||||||||||| || |||||||| |||||||||||||||| ||| ||||||||
Sbjct: 128 taacaatgaatcaaatg-tatgaaaagaataaataattacttaaatt-ttttgaataaga 71
Query: 203 cgaacggtcaaaccatgt-gctaaaaagtcaacggcgtcagacatttcgaaacggagtga 261
|||| ||||||| || || |||||||||||||| |||| |||||| ||||||||| ||
Sbjct: 70 cgaatggtcaaa-cacgtatttaaaaagtcaacggtgtcaaacattttgaaacggagaga 12
Query: 262 gtat 265
||||
Sbjct: 11 gtat 8
Score = 77.8 bits (39), Expect = 4e-15
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 20 tatataccccctccgtttcagaatgtttgacaccgttgacttttt-aacacatgtttaac 78
||||||| | |||||||||| |||||||||||||||||||||||| || || ||||| ||
Sbjct: 5 tatatactctctccgtttcaaaatgtttgacaccgttgactttttaaatacgtgtttgac 64
Query: 79 cgttcgtcttgttcaaaaa 97
| |||||||| ||||||||
Sbjct: 65 cattcgtcttattcaaaaa 83
Score = 75.8 bits (38), Expect = 2e-14
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 196 aataagacgaacggtcaaaccatgtgctaaaaagtcaacggcgtcagacatttcgaaacg 255
||||||||||||||| |||| |||||||||||||||||||| |||| |||||| |||||
Sbjct: 179 aataagacgaacggttaaac-atgtgctaaaaagtcaacggtgtcaaacattttaaaacg 237
Query: 256 gagtgagtat 265
||| ||||||
Sbjct: 238 gagggagtat 247
>48799_oru-miR806:pmrd
Length = 242
Score = 170 bits (86), Expect = 4e-43
Identities = 149/170 (87%)
Strand = Plus / Minus
Query: 45 tttgacaccgttgactttttaacacatgtttaaccgttcgtcttgttcaaaaacttttgt 104
|||||| ||||||| |||| | |||||||| |||||||||||| |||||||| ||||||
Sbjct: 220 tttgacgccgttgatatttttaaacatgtttgaccgttcgtcttattcaaaaatttttgt 161
Query: 105 gaaatatgtaaaattatatgcctacataaaaatatatttagcaatgaatcaaatgataga 164
||||||| ||||| |||||| || |||||| |||||||| |||| |||||||||||||
Sbjct: 160 gaaatatataaaactatatgtatatataaaagtatatttaacaataaatcaaatgatagg 101
Query: 165 aaaagaattaataattacttaaattctttcgaataagacgaacggtcaaa 214
||| |||||| |||||||||||||| ||| ||||||||||||||||||||
Sbjct: 100 aaaggaattattaattacttaaatttttttgaataagacgaacggtcaaa 51
Score = 50.1 bits (25), Expect = 1e-06
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 45 tttgacaccgttgactttttaacacatgtttaaccgttcgtcttgttcaaaaa 97
|||||| ||||||||||||| | | || ||| |||||||||||| ||||||||
Sbjct: 23 tttgacgccgttgacttttttaaatatatttgaccgttcgtcttattcaaaaa 75
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 195 gaataagacgaacggtcaaac 215
|||||||||||||||||||||
Sbjct: 173 gaataagacgaacggtcaaac 193
>49027_osa-miR806d:pmrd
Length = 271
Score = 163 bits (82), Expect = 9e-41
Identities = 167/194 (86%), Gaps = 1/194 (0%)
Strand = Plus / Minus
Query: 22 tataccccctccgtttcagaatgtttgacaccgttgactttttaacacatgtttaaccgt 81
||||| |||||||||| | ||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 256 tatactccctccgttttaaaatgtttgacaccgttgactttttagcacatgtttgaccgt 197
Query: 82 tcgtcttgttcaaaaacttttgtgaaatatgtaaaattatatgcctacataaaaatatat 141
| ||||| ||| |||| ||||||||||||||||| |||||| | || ||| |||||
Sbjct: 196 tagtcttattctaaaaaaattgtgaaatatgtaaaactatatgtgcatatgaaagtatat 137
Query: 142 ttagcaatgaatcaaatgatagaaaaagaattaataattacttaaattctttcgaataag 201
||| ||||||||||||||||| |||||||| |||||||| ||||||| ||| ||||||
Sbjct: 136 ttaacaatgaatcaaatgatatgaaaagaataaataattatttaaatt-ttttgaataaa 78
Query: 202 acgaacggtcaaac 215
||||| ||||||||
Sbjct: 77 acgaatggtcaaac 64
Score = 77.8 bits (39), Expect = 4e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 195 gaataagacgaacggtcaaaccatgtgctaaaaagtcaacggcgtcagacatttcgaaac 254
||||||||| ||||||||||| |||||||||||||||||||| |||| |||||| ||||
Sbjct: 186 gaataagactaacggtcaaac-atgtgctaaaaagtcaacggtgtcaaacattttaaaac 244
Query: 255 ggagtgagtat 265
|||| ||||||
Sbjct: 245 ggagggagtat 255
>48794_oni-miR812:pmrd
Length = 172
Score = 50.1 bits (25), Expect = 1e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 57 gactttttaacacatgtttaaccgttcgtcttgttcaaaaacttt 101
|||||||| ||||||||| ||| |||||||| ||||||||||||
Sbjct: 172 gactttttctcacatgtttgaccattcgtcttattcaaaaacttt 128
>49189_osa-miR1884a:pmrd
Length = 214
Score = 44.1 bits (22), Expect = 6e-05
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 195 gaataagacgaacggtcaaaccatgtgctaaaaagtcaacggcgtcagacattt 248
|||||||||||| |||||||| ||| | ||||||||||||||||| ||||||
Sbjct: 56 gaataagacgaatggtcaaacgttgta-tgaaaagtcaacggcgtcacacattt 4
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 36 ttcagaatgtttgacaccgttgacttttt 64
|||| ||||| ||||||||||||||||||
Sbjct: 214 ttcaaaatgtatgacaccgttgacttttt 186
>49049_osa-miR812b:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 191 tttcgaataagacgaacggtcaaac 215
|||| ||||||||||||||||||||
Sbjct: 39 tttcaaataagacgaacggtcaaac 15
