miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AP006844.2/145236-145468 39947:Oryza sativa Japonica
Group
Length = 233
Score = 323 bits (163), Expect = 7e-88
Identities = 211/227 (92%)
Strand = Plus / Minus
Query: 15 cctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtctt 74
|||||||||||||||||||||||||||||| |||||| | ||||||||| |||||||||
Sbjct: 230 cctccgttttttaatagatgacgccgttgactttttctcatatgtttgaccattcgtctt 171
Query: 75 attcaaaaacattacataattataatttattttattatgagttgttttatcactcatagt 134
||||||||| |||| ||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 170 attcaaaaaatttacgtaattataatttattttgttatgagttgttttatgactcatagt 111
Query: 135 actttaagtgtgatttatattttataaatttgcataaaatttttgaataagacgaatggt 194
||||||||||| |||||||| ||||| ||||||||||||||||||||||||| |||||||
Sbjct: 110 actttaagtgttatttatatcttatacatttgcataaaatttttgaataagatgaatggt 51
Query: 195 caaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggag 241
||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 50 caaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacggag 4
Score = 115 bits (58), Expect = 3e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| |||||||||||||||||||||||||||| | ||||||||||||||| ||||||||
Sbjct: 157 taaattttttgaataagacgaatggtcaaacatatgagaaaaagtcaacggcgtcatcta 216
Query: 229 ttaaaaaacggagg 242
||||||||||||||
Sbjct: 217 ttaaaaaacggagg 230
Score = 95.6 bits (48), Expect = 3e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 16 ctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtctta 75
||||||||||||||||||||||||||||| |||||| ||||||||||| |||| |||||
Sbjct: 4 ctccgttttttaatagatgacgccgttgactttttctcacatgtttgaccattcatctta 63
Query: 76 ttcaaaaa 83
||||||||
Sbjct: 64 ttcaaaaa 71
>RF01058;MIR806;AACV01017333.1/3180-3422 39947:Oryza sativa Japonica
Group
Length = 243
Score = 313 bits (158), Expect = 7e-85
Identities = 224/242 (92%), Gaps = 3/242 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 1 atactccctccgttttttaatagatgacgccgttgactttttctcacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||||||||||||||| ||||| ||||||||||||||||| | || ||||||||||||||
Sbjct: 61 cgtcttattcaaaaaaattacgtaattataatttattttgtaataggttgttttatcact 120
Query: 129 cata-gta-ctttaagt-gtgatttatattttataaatttgcataaaatttttgaataag 185
|||| ||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 121 cataagtaactttaagttgtgatttatatcttatacatttgcataaaatttttgaataag 180
Query: 186 acgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggag 245
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 181 acgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacggaggtag 240
Query: 246 ta 247
||
Sbjct: 241 ta 242
Score = 133 bits (67), Expect = 1e-30
Identities = 73/75 (97%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 75 tttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaa 16
Query: 234 aaacggagggagtat 248
|||||||||||||||
Sbjct: 15 aaacggagggagtat 1
Score = 107 bits (54), Expect = 8e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||
Sbjct: 242 tactacctccgttttttaatagatgacgccgttgactttttctcacatgtttgaccattc 183
Query: 70 gtcttattcaaaaa 83
||||||||||||||
Sbjct: 182 gtcttattcaaaaa 169
>RF01058;MIR806;AP008210.1/21542343-21542582 39947:Oryza sativa
Japonica Group
Length = 240
Score = 313 bits (158), Expect = 7e-85
Identities = 218/238 (91%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| |||||||||||||||| ||||||||||||| |||||| |||| |||||| ||||
Sbjct: 2 tactacctccgttttttaataaatgacgccgttgactttttctcacatatttgaccattc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
|||||||||||||| |||| ||||||||||||||||| ||||||||| |||||||||||
Sbjct: 62 gtcttattcaaaaaatttacgtaattataatttattttgttatgagttattttatcactc 121
Query: 130 atagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacga 189
||| |||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||
Sbjct: 122 ataatactttaagtgtgattaatatcttatatatttgcataaaatttttgaataagacga 181
Query: 190 atggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 182 atggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaatagagggagta 239
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||||||||||||||||| |||| ||||||||||||||| ||||| ||
Sbjct: 80 taaattttttgaataagacgaatggtcaaatatgtgagaaaaagtcaacggcgtcattta 21
Query: 229 ttaaaaaacggagggagta 247
|||||||||||||| ||||
Sbjct: 20 ttaaaaaacggaggtagta 2
Score = 99.6 bits (50), Expect = 2e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
||||||||| |||||||||||||||||||||||| |||||| ||||||||||| ||||
Sbjct: 239 tactccctctattttttaatagatgacgccgttgactttttctcacatgtttgaccattc 180
Query: 70 gtcttattcaaaaa 83
||||||||||||||
Sbjct: 179 gtcttattcaaaaa 166
>RF01058;MIR806;AP008209.1/2791662-2791901 39947:Oryza sativa
Japonica Group
Length = 240
Score = 311 bits (157), Expect = 3e-84
Identities = 214/233 (91%)
Strand = Plus / Plus
Query: 16 ctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtctta 75
|||||||||||||||||||| ||||||||||||||| |||||||| || ||||||||||
Sbjct: 8 ctccgttttttaatagatgatgccgttgattttttctcacatgtttaaccattcgtctta 67
Query: 76 ttcaaaaacattacataattataatttattttattatgagttgttttatcactcatagta 135
|||||||| |||| |||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 68 ttcaaaaattttacgtaattataatttattttattatgagttgttatatcagtcataata 127
Query: 136 ctttaagtgtgatttatattttataaatttgcataaaatttttgaataagacgaatggtc 195
||||||||||||||||||| ||||| | || ||||||||||||| |||||||||||||||
Sbjct: 128 ctttaagtgtgatttatatcttatacaattacataaaatttttggataagacgaatggtc 187
Query: 196 aaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
||| |||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 188 aaatatgtaagaaaaagtcaacggcgtcatctattaaaaaacagagggagtat 240
Score = 105 bits (53), Expect = 3e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||||
Sbjct: 80 taaaatttttgaataagacgaatggttaaacatgtgagaaaaaatcaacggcatcatcta 21
Query: 229 ttaaaaaacggag 241
|||||||||||||
Sbjct: 20 ttaaaaaacggag 8
Score = 101 bits (51), Expect = 5e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||| ||||||||||||||||||||||||| |||||| ||||| |||||| |||
Sbjct: 240 atactccctctgttttttaatagatgacgccgttgactttttcttacatatttgaccatt 181
Query: 69 cgtcttattcaaaaa 83
|||||||| ||||||
Sbjct: 180 cgtcttatccaaaaa 166
>RF01058;MIR806;AAAA02015684.1/2344-2105 39946:Oryza sativa Indica
Group
Length = 240
Score = 309 bits (156), Expect = 1e-83
Identities = 219/240 (91%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||||||||| | |||||||||| |||||||||||| |||||||||||| |||
Sbjct: 1 atactacctccgttttcttatagatgacgttgttgattttttcttacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||| ||||| ||| | ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgttttattaaaataaattacgtaattataatttattttattatgagttgttttatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
|||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||
Sbjct: 121 catagtactttaagtgtgatttatatcttatacatttacataaaatttttgaataagacg 180
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
||||||||||||||| ||||||| ||||||| ||||||| |||||||| ||||||||||
Sbjct: 181 aatggtcaaacatgttagaaaaaatcaacggcgtcatctgttaaaaaatagagggagtat 240
Score = 101 bits (51), Expect = 5e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||| |||||||| |||||||||||||||||||||| ||||||||||| |||
Sbjct: 240 atactccctctattttttaacagatgacgccgttgattttttctaacatgtttgaccatt 181
Query: 69 cgtcttattcaaaaa 83
|||||||||||||||
Sbjct: 180 cgtcttattcaaaaa 166
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 180 aataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacgg 239
||||| |||||||||||||||||||||||||| ||||| ||||||||| | |||||||
Sbjct: 69 aataaaacgaatggtcaaacatgtaagaaaaaatcaacaacgtcatctataagaaaacgg 10
Query: 240 agggagtat 248
||| |||||
Sbjct: 9 aggtagtat 1
>RF01058;MIR806;AP003279.2/92414-92175 39947:Oryza sativa Japonica
Group
Length = 240
Score = 309 bits (156), Expect = 1e-83
Identities = 221/240 (92%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||||||||||||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 1 atactacctccgttttttaatagatgacgccgttgactttttctcacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||||||||| ||||| |||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 61 cgtcttatttaaaaaatttacgtaattgtaatttattttgttatgagttgttttatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaa-tttttgaataagac 187
||||||| |||||||||||||||||| ||||| |||| ||||||| ||||||||||||||
Sbjct: 121 catagtattttaagtgtgatttatatcttatacatttacataaaattttttgaataagac 180
Query: 188 gaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 181 gaatggtcaaacatgtgagaaaaagtcaacggcgtcatctatt-aaaaacggagggagta 239
Score = 119 bits (60), Expect = 2e-26
Identities = 75/80 (93%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 80 taaattttttaaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatcta 21
Query: 229 ttaaaaaacggagggagtat 248
|||||||||||||| |||||
Sbjct: 20 ttaaaaaacggaggtagtat 1
Score = 99.6 bits (50), Expect = 2e-20
Identities = 69/74 (93%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||
Sbjct: 239 tactccctccgttttt-aatagatgacgccgttgactttttctcacatgtttgaccattc 181
Query: 70 gtcttattcaaaaa 83
||||||||||||||
Sbjct: 180 gtcttattcaaaaa 167
>RF01058;MIR806;AACV01013953.1/6296-6534 39947:Oryza sativa Japonica
Group
Length = 239
Score = 307 bits (155), Expect = 4e-83
Identities = 219/239 (91%), Gaps = 1/239 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| ||||||||||||||||||||||||| |||| |||||| |||| |||||| |||
Sbjct: 1 atactacctccgttttttaatagatgacgcctttgactttttctcacatatttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||||||||| ||||| |||| ||||||||||||||||| | |||||||||||||| |||
Sbjct: 61 cgtcttatttaaaaaatttacgtaattataatttattttgt-atgagttgttttattact 119
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
| |||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 120 cgtagtactttaagtgtgatttatatcttatagatttgcataaaatttttaaataagacg 179
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 180 aatggtcaaacatgtgagaaaaaatcaacggtgtcatctattaaaaaacggagggagta 238
Score = 107 bits (54), Expect = 8e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||
Sbjct: 238 tactccctccgttttttaatagatgacaccgttgattttttctcacatgtttgaccattc 179
Query: 70 gtcttattcaaaaa 83
|||||||| |||||
Sbjct: 178 gtcttatttaaaaa 165
Score = 103 bits (52), Expect = 1e-21
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||| ||||||||||||||||||| |||| |||||||||||| || ||||||||
Sbjct: 80 taaattttttaaataagacgaatggtcaaatatgtgagaaaaagtcaaaggcgtcatcta 21
Query: 229 ttaaaaaacggagggagtat 248
|||||||||||||| |||||
Sbjct: 20 ttaaaaaacggaggtagtat 1
>RF01058;MIR806;AAAA02021497.1/5207-4968 39946:Oryza sativa Indica
Group
Length = 240
Score = 307 bits (155), Expect = 4e-83
Identities = 209/227 (92%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||||||||||||||||||||| || |||||||| ||||||||||| ||||
Sbjct: 2 tactccctccgttttttaatagatgacgccattaattttttctcacatgtttgaccattc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
|||||||||||||| ||| |||| |||||||||||| |||| ||||||||||||||||
Sbjct: 62 gtcttattcaaaaaatttatgtaataataatttattttgttatcagttgttttatcactc 121
Query: 130 atagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacga 189
||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||
Sbjct: 122 atagtactttaagtgtgatttatatcttatttatttgcataaagtttttgaataagacga 181
Query: 190 atggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaa 236
|||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 182 atggtcaaacatgtgagaaaaagttaacggtgtcatctattaaaaaa 228
Score = 113 bits (57), Expect = 1e-24
Identities = 75/81 (92%)
Strand = Plus / Minus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatc 226
|||||| |||||||||||||||||||||||||||||| ||||||| | || || ||||||
Sbjct: 82 cataaattttttgaataagacgaatggtcaaacatgtgagaaaaaattaatggcgtcatc 23
Query: 227 tattaaaaaacggagggagta 247
|||||||||||||||||||||
Sbjct: 22 tattaaaaaacggagggagta 2
Score = 79.8 bits (40), Expect = 2e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 21 ttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaa 80
|||||||||||||||| ||||| | |||||| ||||||||||| |||||||||||||||
Sbjct: 228 ttttttaatagatgacaccgttaactttttctcacatgtttgaccattcgtcttattcaa 169
Query: 81 aaac 84
||||
Sbjct: 168 aaac 165
>RF01058;MIR806;AACV01010955.1/6571-6333 39947:Oryza sativa Japonica
Group
Length = 239
Score = 307 bits (155), Expect = 4e-83
Identities = 210/227 (92%), Gaps = 1/227 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| |||||||||||||||||||||||||||||| |||||| ||||||| || ||||
Sbjct: 2 tactacctccgttttttaatagatgacgccgttgactttttctcacatgttaaaccattc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
|||||||||||||| |||| ||||||||||||||||| ||||| |||||||| ||||||
Sbjct: 62 gtcttattcaaaaaatttacgtaattataatttattttgttatgggttgtttt-tcactc 120
Query: 130 atagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacga 189
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 121 atagtactttaagtgtgatttatatcttatacatttgcataaaatttttgaataagacga 180
Query: 190 atggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaa 236
|||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 181 atggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaa 227
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||
Sbjct: 80 taaattttttgaataagacgaatggtttaacatgtgagaaaaagtcaacggcgtcatcta 21
Query: 229 ttaaaaaacggagggagta 247
|||||||||||||| ||||
Sbjct: 20 ttaaaaaacggaggtagta 2
Score = 93.7 bits (47), Expect = 1e-18
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 21 ttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaa 80
|||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||
Sbjct: 227 ttttttaatagatgacgccgttgactttttctcacatgtttgaccattcgtcttattcaa 168
Query: 81 aaa 83
|||
Sbjct: 167 aaa 165
>RF01058;MIR806;AP004634.3/29577-29338 39947:Oryza sativa Japonica
Group
Length = 240
Score = 307 bits (155), Expect = 4e-83
Identities = 218/239 (91%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||| ||||||||||||| ||||||||||| |||||| |||||||||||| |||
Sbjct: 1 atactacctctgttttttaatagacgacgccgttgactttttcttacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||| ||||||||||| ||| ||||||||||||||| | ||||||||||||||||||||
Sbjct: 61 cgtattattcaaaaaatttatgtaattataatttattattttatgagttgttttatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
|||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 121 catagtactttaagtgtgatttatatcttatacatttgtataaaatttttgaataagacg 180
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|||| |||||||||| ||||||||| ||||| |||||||||||||||||||||| ||||
Sbjct: 181 aatgatcaaacatgtgagaaaaagttaacggcgtcatctattaaaaaacggaggtagta 239
Score = 115 bits (58), Expect = 3e-25
Identities = 76/82 (92%)
Strand = Plus / Minus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatc 226
|||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 82 cataaattttttgaataatacgaatggtcaaacatgtaagaaaaagtcaacggcgtcgtc 23
Query: 227 tattaaaaaacggagggagtat 248
||||||||||| |||| |||||
Sbjct: 22 tattaaaaaacagaggtagtat 1
Score = 91.7 bits (46), Expect = 5e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| |||||||||||||||||||||||||||| | |||||| |||||||||| ||||
Sbjct: 239 tactacctccgttttttaatagatgacgccgttaactttttctcacatgtttgatcattc 180
Query: 70 gtcttattcaaaaa 83
||||||||||||||
Sbjct: 179 gtcttattcaaaaa 166
>RF01058;MIR806;AAAA02029213.1/40556-40321 39946:Oryza sativa Indica
Group
Length = 236
Score = 305 bits (154), Expect = 2e-82
Identities = 211/230 (91%)
Strand = Plus / Plus
Query: 16 ctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtctta 75
||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||
Sbjct: 4 ctccgttttttaatagatgacgccgttgactttttctcacatgtttgacccttcgtctta 63
Query: 76 ttcaaaaacattacataattataatttattttattatgagttgttttatcactcatagta 135
|||||||| |||| ||||||||||||||||| ||||||||| |||||||| ||| ||||
Sbjct: 64 ttcaaaaaatttacgtaattataatttattttgttatgagttattttatcattcacagta 123
Query: 136 ctttaagtgtgatttatattttataaatttgcataaaatttttgaataagacgaatggtc 195
||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 124 ctttaagtgtgatttatatcttatatatttgcataaaattttttaataagacgaatggtc 183
Query: 196 aaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggag 245
|||| | ||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 184 aaacgtataagaaaaagtcaacggcgtcatctattaaaaaacagagggag 233
Score = 113 bits (57), Expect = 1e-24
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||
Sbjct: 76 taaattttttgaataagacgaagggtcaaacatgtgagaaaaagtcaacggcgtcatcta 17
Query: 229 ttaaaaaacggag 241
|||||||||||||
Sbjct: 16 ttaaaaaacggag 4
Score = 87.7 bits (44), Expect = 7e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 12 ctccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgt 71
||||||| ||||||||||||||||||||||||| |||||| || | ||||||| ||||||
Sbjct: 233 ctccctctgttttttaatagatgacgccgttgactttttcttatacgtttgaccattcgt 174
Query: 72 cttattcaaaaa 83
|||||| |||||
Sbjct: 173 cttattaaaaaa 162
>RF01058;MIR806;ABRL01001709.1/11361-11598 65489:Oryza barthii
Length = 238
Score = 299 bits (151), Expect = 1e-80
Identities = 217/238 (91%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||| |||||||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 2 tactccctccattttttaatagatgacgccgttgactttttctcacatgtttgaccattt 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
|||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 62 gtcttattcaaaaaatttacgtaattataatttattttgttatgagttgttttatcactc 121
Query: 130 atagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacga 189
||| |||||| ||||||||||||| ||||| |||||| |||||||||| ||||||||||
Sbjct: 122 ataatacttt--gtgtgatttatatcttatacatttgcttaaaattttttaataagacga 179
Query: 190 atggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|||||||||||| | |||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 180 atggtcaaacatctgagaaaaagtcaacgatgtcatctattaaaaaacggaggtagta 237
Score = 117 bits (59), Expect = 8e-26
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 80 taaattttttgaataagacaaatggtcaaacatgtgagaaaaagtcaacggcgtcatcta 21
Query: 229 ttaaaaaacggagggagta 247
|||||||| ||||||||||
Sbjct: 20 ttaaaaaatggagggagta 2
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| |||||||||||||||||||||| |||||| |||||| | ||||||||| ||||
Sbjct: 237 tactacctccgttttttaatagatgacatcgttgactttttctcagatgtttgaccattc 178
Query: 70 gtcttattcaaaaa 83
|||||||| |||||
Sbjct: 177 gtcttattaaaaaa 164
>RF01058;MIR806;AP004223.2/47345-47106 39947:Oryza sativa Japonica
Group
Length = 240
Score = 297 bits (150), Expect = 4e-80
Identities = 210/230 (91%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||||| |||| ||||||||||| ||||||| |||||| ||||||||||| |||
Sbjct: 1 atactccctccattttctaatagatgacaccgttgactttttctcacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 61 cgtcttattcaaaaaatttacataattataacttattttgttatgagttgttttatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
||||||| |||||||||||||||||| ||| | ||||||||||| |||||||||||||||
Sbjct: 121 catagtattttaagtgtgatttatatattagacatttgcataaattttttgaataagacg 180
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacg 238
|||||||||||||| |||||||||||| | |||||||||||||||||||
Sbjct: 181 aatggtcaaacatgcgagaaaaagtcaaagttgtcatctattaaaaaacg 230
Score = 127 bits (64), Expect = 8e-29
Identities = 76/80 (95%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 80 taaattttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggtgtcatcta 21
Query: 229 ttaaaaaacggagggagtat 248
||| |||| |||||||||||
Sbjct: 20 ttagaaaatggagggagtat 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 19 cgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattc 78
|||||||||||||||||| | |||| |||||| |||||||||| |||||||||||||
Sbjct: 230 cgttttttaatagatgacaactttgactttttctcgcatgtttgaccattcgtcttattc 171
Query: 79 aaaaa 83
|||||
Sbjct: 170 aaaaa 166
>RF01058;MIR806;AC130732.2/37734-37972 39947:Oryza sativa Japonica
Group
Length = 239
Score = 297 bits (150), Expect = 4e-80
Identities = 213/234 (91%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||
Sbjct: 1 atactccctccgttttttaatagatgacgccgttgactttttatcacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
|||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 61 tgtcttatttaaaaaatttacataattataatttattttgttatgagttgttttatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
|| | ||||||||||||||||||||| ||||| ||||| | |||| |||||||||||||
Sbjct: 121 cacaatactttaagtgtgatttatatattatacatttgtaaaaaaaatttgaataagacg 180
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagg 242
|||| |||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 181 aatgatcaaacatgtaagaaaaagtcaacggcgtcatatattaaaaaacggagg 234
Score = 111 bits (56), Expect = 5e-24
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||| |||||||| ||||||||||||||| | ||||||||||||| ||||||||
Sbjct: 80 taaattttttaaataagacaaatggtcaaacatgtgataaaaagtcaacggcgtcatcta 21
Query: 229 ttaaaaaacggagggagtat 248
||||||||||||||||||||
Sbjct: 20 ttaaaaaacggagggagtat 1
Score = 93.7 bits (47), Expect = 1e-18
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 15 cctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtctt 74
|||||||||||||||| ||||||||||||| |||||| ||||||||||| |||||||||
Sbjct: 234 cctccgttttttaatatatgacgccgttgactttttcttacatgtttgatcattcgtctt 175
Query: 75 attcaaa 81
|||||||
Sbjct: 174 attcaaa 168
>RF01058;MIR806;AP005509.3/90706-90467 39947:Oryza sativa Japonica
Group
Length = 240
Score = 295 bits (149), Expect = 2e-79
Identities = 220/241 (91%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||| ||||||||||||| ||| ||||| ||||||| |||||||||||| |||
Sbjct: 1 atactacctctgttttttaatagaagacaccgttaatttttttttacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacatt-acataattataatttattttattatgagttgttttatcac 127
||||||||||||||| ||| || ||||||||||||||||| |||||||||||||||||||
Sbjct: 61 cgtcttattcaaaaaaatttacgtaattataatttattttgttatgagttgttttatcac 120
Query: 128 tcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagac 187
||||||||||||||||||||||||||| ||||| |||||||| || ||||| ||||||||
Sbjct: 121 tcatagtactttaagtgtgatttatatcttatacatttgcat-aatttttttaataagac 179
Query: 188 gaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
||||||||||||| || |||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 180 gaatggtcaaacacgtgagaaaaagtcaacggtgttatctattaaaaaatggagggagta 239
Query: 248 t 248
|
Sbjct: 240 t 240
Score = 101 bits (51), Expect = 5e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
|||||||||||||||||||||||||||||||| ||||| | ||||||||| |||||||||
Sbjct: 75 tttttgaataagacgaatggtcaaacatgtaaaaaaaaattaacggtgtcttctattaaa 16
Query: 234 aaacggagggagtat 248
|||| |||| |||||
Sbjct: 15 aaacagaggtagtat 1
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||||| ||||||||||||| || ||||||| |||||| || |||||||| |||
Sbjct: 240 atactccctccattttttaatagataacaccgttgactttttctcacgtgtttgaccatt 181
Query: 69 cgtcttattcaaaaa 83
||||||||| |||||
Sbjct: 180 cgtcttattaaaaaa 166
>RF01058;MIR806;AC210475.1/103079-103318 4538:Oryza glaberrima
(African rice)
Length = 240
Score = 293 bits (148), Expect = 6e-79
Identities = 217/240 (90%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| ||||||||||||||||||||| | ||||||||||| | |||||||| |||
Sbjct: 1 atactacctccgttttttaatagatgatactattgattttttctcatatgtttgatcatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||| ||||||||||| |||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 61 cgttttattcaaaaaatttacataattataatttattttgttatcagttgttttatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
|||||||||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||
Sbjct: 121 catagtactttaagtgtgatttatatcttatacatttgcataaatttttcgaataagacg 180
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
||||||||||||||| ||||||| |||||||||| || ||||||||||||||||||||||
Sbjct: 181 aatggtcaaacatgtgagaaaaaatcaacggtgttatatattaaaaaacggagggagtat 240
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||||||||| || || |||||||||||||| ||||||||||| |||
Sbjct: 240 atactccctccgttttttaatatataacaccgttgattttttctcacatgtttgaccatt 181
Query: 69 cgtcttattcaaaaa 83
|||||||||| ||||
Sbjct: 180 cgtcttattcgaaaa 166
Score = 79.8 bits (40), Expect = 2e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||| ||||||| |||||||| | ||||||| |||| || |||||||
Sbjct: 80 taaattttttgaataaaacgaatgatcaaacatatgagaaaaaatcaatagtatcatcta 21
Query: 229 ttaaaaaacggagggagtat 248
|||||||||||||| |||||
Sbjct: 20 ttaaaaaacggaggtagtat 1
>RF01058;MIR806;AL731623.3/66034-66275 39947:Oryza sativa Japonica
Group
Length = 242
Score = 289 bits (146), Expect = 1e-77
Identities = 218/241 (90%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||
Sbjct: 2 tactacctccgttttttaatagatgacgccgttgactttttctcacatgtttgaccattc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
|||||||| ||||| ||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 62 gtcttatttaaaaaatttaaataattataatttatttggttatgagttgttttatcactc 121
Query: 130 atagtactttaagtgtgatttatattttataaatttgc--ataaaatttttgaataagac 187
||||||||||||||||||| ||||| ||||| |||||| | |||| |||||||||||
Sbjct: 122 atagtactttaagtgtgatgtatatcttatatatttgcaaaaaaaaaaattgaataagac 181
Query: 188 gaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 182 gaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacggatggagta 241
Query: 248 t 248
|
Sbjct: 242 t 242
Score = 117 bits (59), Expect = 8e-26
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 80 taaattttttaaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatcta 21
Query: 229 ttaaaaaacggagggagta 247
|||||||||||||| ||||
Sbjct: 20 ttaaaaaacggaggtagta 2
Score = 103 bits (52), Expect = 1e-21
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||| |||||||||||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 242 atactccatccgttttttaatagatgacgccgttgactttttctcacatgtttgaccatt 183
Query: 69 cgtcttattcaa 80
||||||||||||
Sbjct: 182 cgtcttattcaa 171
>RF01058;MIR806;AAAA02029492.1/22511-22272 39946:Oryza sativa Indica
Group
Length = 240
Score = 287 bits (145), Expect = 4e-77
Identities = 208/229 (90%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| |||
Sbjct: 1 atactccctccgttttttaatagatgacgccattgactttttctcacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||||||||| |||| ||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 61 cgtcttattagaaaaatttacataattacaatttattttgttatgagttgttttatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||| |
Sbjct: 121 tatagtactttaagtgtgatttatatcatatatatttgcataaaattttttaataagatg 180
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaac 237
||||||||||||||| | ||||||||||||| || ||||||||||||||
Sbjct: 181 aatggtcaaacatgtgataaaaagtcaacggcgttatctattaaaaaac 229
Score = 113 bits (57), Expect = 1e-24
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 180 aataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacgg 239
|||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||
Sbjct: 69 aataagacgaatggtcaaacatgtgagaaaaagtcaatggcgtcatctattaaaaaacgg 10
Query: 240 agggagtat 248
|||||||||
Sbjct: 9 agggagtat 1
Score = 63.9 bits (32), Expect = 1e-09
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 20 gttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattca 79
|||||||||||||| |||||||||| ||||| ||||||||||| |||| ||||||| |
Sbjct: 229 gttttttaatagataacgccgttgactttttatcacatgtttgaccattcatcttattaa 170
Query: 80 aaaa 83
||||
Sbjct: 169 aaaa 166
>RF01058;MIR806;AP004993.3/124207-123967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 287 bits (145), Expect = 4e-77
Identities = 218/241 (90%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||||||||||||||||||||||| |||||| | ||||||||| | |
Sbjct: 1 atactccctccgttttttaatagatgacgccgttgactttttctcatatgtttgaccact 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgtttt-atcac 127
||||||||||||||| |||| ||||||||||||||||| |||||||||||||| |||||
Sbjct: 61 cgtcttattcaaaaaatttacgtaattataatttattttgttatgagttgtttttatcac 120
Query: 128 tcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagac 187
|||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 121 tcatagtattttaagtgtgatttatatcatatgcatttgcataaaatttttgaataagac 180
Query: 188 gaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|| || ||||| |||| ||||||||||||| |||||||||||||||||||| ||| ||||
Sbjct: 181 gagtgttcaaatatgtgagaaaaagtcaacagtgtcatctattaaaaaacgaaggtagta 240
Query: 248 t 248
|
Sbjct: 241 t 241
Score = 119 bits (60), Expect = 2e-26
Identities = 75/80 (93%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| |||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||
Sbjct: 80 taaattttttgaataagacgagtggtcaaacatatgagaaaaagtcaacggcgtcatcta 21
Query: 229 ttaaaaaacggagggagtat 248
||||||||||||||||||||
Sbjct: 20 ttaaaaaacggagggagtat 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| ||| |||||||||||||||||| | ||||| |||||| |||| ||||| | |
Sbjct: 241 atactaccttcgttttttaatagatgacactgttgactttttctcacatatttgaacact 182
Query: 69 cgtcttattcaaaaa 83
|||||||||||||||
Sbjct: 181 cgtcttattcaaaaa 167
>RF01058;MIR806;AAAA02003997.1/18487-18247 39946:Oryza sativa Indica
Group
Length = 241
Score = 285 bits (144), Expect = 2e-76
Identities = 217/240 (90%), Gaps = 1/240 (0%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
||||||||||||||||||||| || |||||||||| |||||| |||| |||||| ||||
Sbjct: 240 tactccctccgttttttaataaataacgccgttgactttttctcacatatttgaccattc 181
Query: 70 gtcttattcaaaaacatt-acataattataatttattttattatgagttgttttatcact 128
|||||||||||||| ||| | ||||||||||||||||| |||||||||||||||||||
Sbjct: 180 gtcttattcaaaaaaatttatgtaattataatttattttgttatgagttgttttatcacg 121
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
|||||||||||| |||||||||||| |||| ||||||||||||||||| |||||||||
Sbjct: 120 tatagtactttaaatgtgatttatataatatacatttgcataaaatttttaaataagacg 61
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| |||||
Sbjct: 60 aatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacagaggtagtat 1
Score = 107 bits (54), Expect = 8e-23
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
||||||||||||||||||||||||| |||| ||||||||||||||| || || |||||||
Sbjct: 167 tttttgaataagacgaatggtcaaatatgtgagaaaaagtcaacggcgttatttattaaa 226
Query: 234 aaacggagggagta 247
||||||||||||||
Sbjct: 227 aaacggagggagta 240
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||| ||||||||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 1 atactacctctgttttttaatagatgacgccgttgactttttctcacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaa 83
||||||||| |||||
Sbjct: 61 cgtcttatttaaaaa 75
>RF01058;MIR806;AACV01001080.1/11467-11706 39947:Oryza sativa
Japonica Group
Length = 240
Score = 285 bits (144), Expect = 2e-76
Identities = 216/240 (90%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| ||||||||||||||||||||||| |||||| |||||| |||||||||| |
Sbjct: 1 atactacctccgttttttaatagatgacgtcgttgactttttctcacatgtttgatctct 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 61 cgtcttattcaaaaaatttacataattataattaattttgttatgagttgttttatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
|||||||||||||||||||||||||| ||||| ||| |||||||||||||||||| ||||
Sbjct: 121 catagtactttaagtgtgatttatatcttatacattcgcataaaatttttgaatatgacg 180
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
||| ||||||||||| ||||||||||||||| | |||||||||||||| |||| |||||
Sbjct: 181 aatagtcaaacatgtgagaaaaagtcaacggcatgatctattaaaaaacagaggcagtat 240
Score = 95.6 bits (48), Expect = 3e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| |||||||||||||||| | |||||||||| |||||||||||||| ||||||||
Sbjct: 80 taaattttttgaataagacgagagatcaaacatgtgagaaaaagtcaacgacgtcatcta 21
Query: 229 ttaaaaaacggagggagtat 248
|||||||||||||| |||||
Sbjct: 20 ttaaaaaacggaggtagtat 1
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||| |||||||||||||| | |||||||| |||||| ||||||||||| |||
Sbjct: 240 atactgcctctgttttttaatagatcatgccgttgactttttctcacatgtttgactatt 181
Query: 69 cgtcttattcaaaaa 83
|||| ||||||||||
Sbjct: 180 cgtcatattcaaaaa 166
>RF01058;MIR806;AP003517.3/144562-144323 39947:Oryza sativa Japonica
Group
Length = 240
Score = 285 bits (144), Expect = 2e-76
Identities = 213/236 (90%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||||||||| |||||||||||| ||||| |||||| || |||||| || |||
Sbjct: 1 atactacctccgttttataatagatgacgttgttgactttttcttatatgttttaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||||||||| ||||| |||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 61 cgtcttatttaaaaaatttacgtaattataatttattttgttatgagttgttttatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
|||| || |||||||||||||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 121 catattattttaagtgtgatttatatcttatacatttgcataaaatttttgaataaaacg 180
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggaggga 244
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 181 aatggtcaaacatgcgagaaaaagtcaacggcatcatctattaaaaaacggaggga 236
Score = 87.7 bits (44), Expect = 7e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||| ||||||||||||||| |||||| ||||||||||||||| ||||||||
Sbjct: 80 taaattttttaaataagacgaatggtaaaacatataagaaaaagtcaacaacgtcatcta 21
Query: 229 ttaaaaaacggagggagtat 248
||| |||||||||| |||||
Sbjct: 20 ttataaaacggaggtagtat 1
Score = 85.7 bits (43), Expect = 3e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 13 tccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtc 72
||||||||||||||||||||||| |||||||| |||||| |||||||||| ||||||
Sbjct: 236 tccctccgttttttaatagatgatgccgttgactttttctcgcatgtttgaccattcgtt 177
Query: 73 ttattcaaaaa 83
|||||||||||
Sbjct: 176 ttattcaaaaa 166
>RF01058;MIR806;AP008213.1/52947-52710 39947:Oryza sativa Japonica
Group
Length = 238
Score = 285 bits (144), Expect = 2e-76
Identities = 207/227 (91%), Gaps = 2/227 (0%)
Strand = Plus / Plus
Query: 21 ttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaa 80
||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| ||
Sbjct: 13 ttttttaatagatgacgccgttgattttttctcatatgtttgaccattcgtcttattaaa 72
Query: 81 aaacattacataattataatttattttattatgagttgttttatcactcatagtacttta 140
||| |||| ||||||||||||||||| |||||||||| ||||||||| ||||||||||
Sbjct: 73 aaaatttacgtaattataatttattttgttatgagttggtttatcact--tagtacttta 130
Query: 141 agtgtgatttatattttataaatttgcataaaatttttgaataagacgaatggtcaaaca 200
|||||||||||||| ||||| ||||||||||| ||||||||||||||||||| |||||||
Sbjct: 131 agtgtgatttatatcttatatatttgcataaattttttgaataagacgaatgttcaaaca 190
Query: 201 tgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
||| | |||||||||| |||||||| |||||||||||||||||||||
Sbjct: 191 tgtgaaaaaaagtcaatggtgtcatttattaaaaaacggagggagta 237
Score = 87.7 bits (44), Expect = 7e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||| |||||||||||||||||||||| | ||||||| ||||||| ||||||||
Sbjct: 80 taaatttttttaataagacgaatggtcaaacatatgagaaaaaatcaacggcgtcatcta 21
Query: 229 ttaaaaaa 236
||||||||
Sbjct: 20 ttaaaaaa 13
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
||||||||||||||||||||| ||||| || |||| ||||| |||||||||| ||||
Sbjct: 237 tactccctccgttttttaataaatgacaccattgactttttttcacatgtttgaacattc 178
Query: 70 gtcttattcaaaaa 83
||||||||||||||
Sbjct: 177 gtcttattcaaaaa 164
>RF01058;MIR806;AAAA02000630.1/4019-3780 39946:Oryza sativa Indica
Group
Length = 240
Score = 283 bits (143), Expect = 6e-76
Identities = 215/239 (89%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||||||||||| |||||||||||||| |||||| |||||||| || ||||
Sbjct: 2 tactccctccgttttttaattgatgacgccgttgactttttctcacatgtttaactattc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
||||||||||||| |||| |||||||||||| |||| | |||||||||||||||| ||
Sbjct: 62 atcttattcaaaaaatttacgtaattataatttgttttgtcatgagttgttttatcattc 121
Query: 130 atagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacga 189
||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 122 ataatactttaagtgtgatttatatcttatatatttgcataaaatttttgaataagacga 181
Query: 190 atggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
||| |||||||| | |||||||||||| | |||||||||||||||||||||| |||||
Sbjct: 182 atgatcaaacatatgagaaaaagtcaaatgcgtcatctattaaaaaacggaggaagtat 240
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||||| |||| || |||||||| ||||||||||||||| |||||| |
Sbjct: 80 taaattttttgaataagatgaatagttaaacatgtgagaaaaagtcaacggcgtcatcaa 21
Query: 229 ttaaaaaacggagggagta 247
|||||||||||||||||||
Sbjct: 20 ttaaaaaacggagggagta 2
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||||||||||||||||||||||| |||| |||||| | |||||||| |||
Sbjct: 240 atacttcctccgttttttaatagatgacgcatttgactttttctcatatgtttgatcatt 181
Query: 69 cgtcttattcaaaaa 83
|||||||||||||||
Sbjct: 180 cgtcttattcaaaaa 166
>RF01058;MIR806;AC123528.2/32797-33036 39947:Oryza sativa Japonica
Group
Length = 240
Score = 283 bits (143), Expect = 6e-76
Identities = 214/235 (91%), Gaps = 2/235 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||| ||| |||||||||||||||||| |||||| |||||| |||||||| || |||
Sbjct: 1 atactctctctgttttttaatagatgacgacgttgactttttctcacatgtttaaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 61 cgtcttattcaaaaaatttacgtaattataatttattttgttatgagttgttttatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
||||||| |||||||||||||||||| |||| ||| |||||||| ||||||||||||||
Sbjct: 121 catagtattttaagtgtgatttatatcatatacattagcataaaa-ttttgaataagacg 179
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatcta-ttaaaaaacggagg 242
||||||||||||||||||||||||||||| | |||||||| ||||||||||||||
Sbjct: 180 aatggtcaaacatgtaagaaaaagtcaacagcgtcatctatttaaaaaacggagg 234
Score = 103 bits (52), Expect = 1e-21
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||||||||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 80 taaattttttgaataagacgaatggttaaacatgtgagaaaaagtcaacgtcgtcatcta 21
Query: 229 ttaaaaaacggagggagtat 248
||||||||| ||| ||||||
Sbjct: 20 ttaaaaaacagagagagtat 1
Score = 89.7 bits (45), Expect = 2e-17
Identities = 64/69 (92%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 15 cctccgttttttaa-tagatgacgccgttgattttttcgtacatgtttgacaattcgtct 73
|||||||||||||| |||||||||| ||||| |||||| |||||||||||| ||||||||
Sbjct: 234 cctccgttttttaaatagatgacgctgttgactttttcttacatgtttgaccattcgtct 175
Query: 74 tattcaaaa 82
|||||||||
Sbjct: 174 tattcaaaa 166
>RF01058;MIR806;AACV01002118.1/598-360 39947:Oryza sativa Japonica
Group
Length = 239
Score = 281 bits (142), Expect = 2e-75
Identities = 215/238 (90%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||| ||||||||||||||||||| |||| ||||| ||||||||||| ||||
Sbjct: 2 tactccctccattttttaatagatgacgccattgactttttttcacatgtttgaccattc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
|||||||||| ||| |||| ||||||||||||||||| ||||||| ||||||||||||
Sbjct: 62 gtcttattcagaaaatttacgtaattataatttattttgctatgagt-gttttatcactc 120
Query: 130 atagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacga 189
|||||| |||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||
Sbjct: 121 atagtattttaagtgtgatttatatcttatacattcgcataaaatttttgaataaaacga 180
Query: 190 atggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|||||||||||||||||||||| ||||||| |||||||||||||||||| ||| ||||
Sbjct: 181 atggtcaaacatgtaagaaaaaatcaacggcgtcatctattaaaaaacgaaggtagta 238
Score = 107 bits (54), Expect = 8e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| ||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 238 tactaccttcgttttttaatagatgacgccgttgattttttcttacatgtttgaccattc 179
Query: 70 gtcttattcaaaaa 83
|| |||||||||||
Sbjct: 178 gttttattcaaaaa 165
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||| |||||||||||||||||||||||||| | |||||||||| || ||||||||
Sbjct: 80 taaattttctgaataagacgaatggtcaaacatgtgaaaaaaagtcaatggcgtcatcta 21
Query: 229 ttaaaaaacggagggagta 247
|||||||| ||||||||||
Sbjct: 20 ttaaaaaatggagggagta 2
>RF01058;MIR806;AAAA02018694.1/17845-18085 39946:Oryza sativa Indica
Group
Length = 241
Score = 280 bits (141), Expect = 9e-75
Identities = 217/241 (90%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||||||||||||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 1 atactacctccgttttttaatagatgacgccgttgactttttctcacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcac- 127
||||||||||||||| |||| ||||||||||| |||| |||||||| || ||||||
Sbjct: 61 cgtcttattcaaaaaatttacgtaattataattgatttggttatgagtagtagtatcaca 120
Query: 128 tcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagac 187
||||||||||||||||||||| ||||| ||||| || | || ||||||||||||||||||
Sbjct: 121 tcatagtactttaagtgtgatatatatattatacatgtacaaaaaatttttgaataagac 180
Query: 188 gaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 181 gaatgttcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacggagggagta 240
Query: 248 t 248
|
Sbjct: 241 t 241
Score = 127 bits (64), Expect = 8e-29
Identities = 76/80 (95%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 80 taaattttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatcta 21
Query: 229 ttaaaaaacggagggagtat 248
|||||||||||||| |||||
Sbjct: 20 ttaaaaaacggaggtagtat 1
Score = 109 bits (55), Expect = 2e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||
Sbjct: 241 atactccctccgttttttaatagatgacgccgttgactttttctcacatgtttgaacatt 182
Query: 69 cgtcttattcaaaaa 83
|||||||||||||||
Sbjct: 181 cgtcttattcaaaaa 167
>RF01058;MIR806;AACV01021068.1/1543-1306 39947:Oryza sativa Japonica
Group
Length = 238
Score = 280 bits (141), Expect = 9e-75
Identities = 205/225 (91%), Gaps = 1/225 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||||||||||||||||||||| |||| |||||| ||||||||||| ||||
Sbjct: 2 tactccctccgttttttaatagatgacgccattgactttttctcacatgtttgaccattc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 62 atcttattcaaaaaaattatgtaattataatttattttgttatgagttgttttatcactt 121
Query: 130 atagtac-tttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
||||||| |||||||||||||||||| |||| ||||||||||| ||||| |||||||||
Sbjct: 122 atagtacttttaagtgtgatttatatcttatgcatttgcataaattttttaaataagacg 181
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
|||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 182 aatggtcaaacatgtaagaaaaagtcaacgacgtcatctgttaaa 226
Score = 115 bits (58), Expect = 3e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
||||||||||||| |||||||||||||||| |||||||||||| || |||||||||||||
Sbjct: 75 tttttgaataagatgaatggtcaaacatgtgagaaaaagtcaatggcgtcatctattaaa 16
Query: 234 aaacggagggagta 247
||||||||||||||
Sbjct: 15 aaacggagggagta 2
Score = 71.9 bits (36), Expect = 4e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 24 tttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaaaaa 83
||||| |||||||| |||||| |||||| |||||||||||| |||||||||||| |||||
Sbjct: 226 tttaacagatgacgtcgttgactttttcttacatgtttgaccattcgtcttatttaaaaa 167
>RF01058;MIR806;AAAA02027986.1/13363-13124 39946:Oryza sativa Indica
Group
Length = 240
Score = 278 bits (140), Expect = 4e-74
Identities = 215/240 (89%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||||||||||||||| |||||| |||||||||||| ||||||||||| |||
Sbjct: 1 atactacctccgttttttaataaatgacgtcgttgattttttttcacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
|||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 61 tgtcttattcaaaaaatttacgtaattataatttattttgttatgagttgttttatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 121 catggtactttaagtgtaatttatatcttatatatttgcataaaatttttgaataagacg 180
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
|||||||||| || | ||||||||| ||| | ||||| ||||||||| |||||| |||||
Sbjct: 181 aatggtcaaaaatatgagaaaaagttaacagcgtcatttattaaaaatcggaggtagtat 240
Score = 87.7 bits (44), Expect = 7e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| |||||||||||||| ||||||||||||||| | ||||| |||||| ||||| ||
Sbjct: 80 taaattttttgaataagacaaatggtcaaacatgtgaaaaaaaatcaacgacgtcattta 21
Query: 229 ttaaaaaacggagggagtat 248
|||||||||||||| |||||
Sbjct: 20 ttaaaaaacggaggtagtat 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||||| ||||||||| ||||||| ||| | |||||| | || |||||| |||
Sbjct: 240 atactacctccgatttttaataaatgacgctgttaactttttctcatatttttgaccatt 181
Query: 69 cgtcttattcaaaaa 83
|||||||||||||||
Sbjct: 180 cgtcttattcaaaaa 166
>RF01058;MIR806;AAAA02019771.1/14399-14160 39946:Oryza sativa Indica
Group
Length = 240
Score = 276 bits (139), Expect = 1e-73
Identities = 217/241 (90%), Gaps = 4/241 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| ||| ||||||| |||||||||||| |||||||||||| ||||||||||| |||
Sbjct: 1 atactaccttcgtttttcaatagatgacgctgttgattttttctcacatgtttgactatt 60
Query: 69 cgtcttattcaaaaaca--ttacataattataatttattttattatgagttgttttatca 126
|||||||||||||| | |||| ||||||| ||| |||| ||||||||||||||||||
Sbjct: 61 tgtcttattcaaaaaaaaattacgtaattat--ttttttttgttatgagttgttttatca 118
Query: 127 ctcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataaga 186
|||||| || |||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 119 ctcataatattttaagtgtgatttatatcttatacatttgcataaaatttttgaataaga 178
Query: 187 cgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagt 246
|||||| |||||||||| ||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 179 cgaatgatcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacggaggaagt 238
Query: 247 a 247
|
Sbjct: 239 a 239
Score = 99.6 bits (50), Expect = 2e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| |||||||||||||||||||||||||||||| |||||| |||||||||| ||||
Sbjct: 239 tacttcctccgttttttaatagatgacgccgttgactttttctcacatgtttgatcattc 180
Query: 70 gtcttattcaaaaa 83
||||||||||||||
Sbjct: 179 gtcttattcaaaaa 166
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
|||||||||||||| ||| ||||||||||| ||||||| ||||| | |||||||||| ||
Sbjct: 75 tttttgaataagacaaatagtcaaacatgtgagaaaaaatcaacagcgtcatctattgaa 16
Query: 234 aaacggagggagtat 248
||||| ||| |||||
Sbjct: 15 aaacgaaggtagtat 1
>RF01058;MIR806;AAAA02016505.1/12738-12983 39946:Oryza sativa Indica
Group
Length = 246
Score = 276 bits (139), Expect = 1e-73
Identities = 220/247 (89%), Gaps = 10/247 (4%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| |||| ||||||||||||||||||||||||||||||| || ||||||||| ||||
Sbjct: 2 tactacctctgttttttaatagatgacgccgttgatttttt--tatatgtttgaccattc 59
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
|||||||| ||||| |||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 60 gtcttatttaaaaaatttacgtaattataatttattttgttgtgagttgttttatcactc 119
Query: 130 ata--------gtactttaagtgtgatttatattttataaatttgcataaaatttttgaa 181
||| |||||||||||||||| ||||| |||| ||||||||||||||||||||
Sbjct: 120 atagtaccatagtactttaagtgtgatgtatatcatatatatttgcataaaatttttgaa 179
Query: 182 taagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggag 241
|||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||
Sbjct: 180 taagacgaatggtcaaacatgttagaaaaagttaacggcgtcatctattaaaaaacggag 239
Query: 242 ggagtat 248
|||||||
Sbjct: 240 ggagtat 246
Score = 109 bits (55), Expect = 2e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||||||||||||||||||||| | |||||| ||||||||||| |||
Sbjct: 246 atactccctccgttttttaatagatgacgccgttaactttttctaacatgtttgaccatt 187
Query: 69 cgtcttattcaaaaa 83
|||||||||||||||
Sbjct: 186 cgtcttattcaaaaa 172
Score = 79.8 bits (40), Expect = 2e-14
Identities = 70/79 (88%), Gaps = 2/79 (2%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||| |||||||||||||||||||||| || ||||| ||||||| ||||||||
Sbjct: 78 taaattttttaaataagacgaatggtcaaacatata--aaaaaatcaacggcgtcatcta 21
Query: 229 ttaaaaaacggagggagta 247
||||||||| |||| ||||
Sbjct: 20 ttaaaaaacagaggtagta 2
>RF01058;MIR806;AACV01017023.1/4171-3932 39947:Oryza sativa Japonica
Group
Length = 240
Score = 276 bits (139), Expect = 1e-73
Identities = 208/231 (90%)
Strand = Plus / Plus
Query: 18 ccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttatt 77
||||||||||||||||||| ||||||| ||||| |||||||| || ||||||||||||
Sbjct: 10 ccgttttttaatagatgacaccgttgactttttatcacatgtttaaccattcgtcttatt 69
Query: 78 caaaaacattacataattataatttattttattatgagttgttttatcactcatagtact 137
|||||| |||| ||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 70 caaaaaatttacgtaattataatttattttgttatgggttgttttatcactcatagtact 129
Query: 138 ttaagtgtgatttatattttataaatttgcataaaatttttgaataagacgaatggtcaa 197
||||||||||||||||| ||||| |||| |||||| ||||| ||||||||||||||||||
Sbjct: 130 ttaagtgtgatttatatcttatacatttacataaattttttaaataagacgaatggtcaa 189
Query: 198 acatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
|||||| ||||||| |||| || ||||| |||||||||||||||| |||||
Sbjct: 190 acatgtgagaaaaaatcaatggcgtcatttattaaaaaacggaggtagtat 240
Score = 109 bits (55), Expect = 2e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||||||||||||| |||||||| | ||||||||||||||||||||||
Sbjct: 80 taaattttttgaataagacgaatggttaaacatgtgataaaaagtcaacggtgtcatcta 21
Query: 229 ttaaaaaacgg 239
|||||||||||
Sbjct: 20 ttaaaaaacgg 10
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||||||||||||||| |||||||| ||||||||||| ||||||||||| |||
Sbjct: 240 atactacctccgttttttaataaatgacgccattgattttttctcacatgtttgaccatt 181
Query: 69 cgtcttattcaaaaa 83
||||||||| |||||
Sbjct: 180 cgtcttatttaaaaa 166
>RF01058;MIR806;AC120538.4/38136-38374 39947:Oryza sativa Japonica
Group
Length = 239
Score = 274 bits (138), Expect = 6e-73
Identities = 214/238 (89%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| ||||| ||||||||||||||||||||||| ||||||| |||||||| | ||||
Sbjct: 2 tactacctccattttttaatagatgacgccgttggttttttctcacatgtttaagcattc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
|||||||| ||||| ||| ||||| ||||||| ||| ||||||||| |||||||||||
Sbjct: 62 gtcttatttaaaaaatttatgtaattgtaatttactttgttatgagttattttatcactc 121
Query: 130 atagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacga 189
||||||||||||||||||||||||| ||||| |||| |||||||||||| ||||||||||
Sbjct: 122 atagtactttaagtgtgatttatatcttatacatttacataaaattttt-aataagacga 180
Query: 190 atggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 181 atagtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacggagggagta 238
Score = 105 bits (53), Expect = 3e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||
Sbjct: 238 tactccctccgttttttaatagatgacgccgttgactttttctcacatgtttgactattc 179
Query: 70 gtcttattcaaaa 82
|||||||| ||||
Sbjct: 178 gtcttattaaaaa 166
Score = 81.8 bits (41), Expect = 4e-15
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatc 226
|||||| ||||| ||||||||||||| | |||||||| ||||||| |||||| ||||||
Sbjct: 82 cataaattttttaaataagacgaatgcttaaacatgtgagaaaaaaccaacggcgtcatc 23
Query: 227 tattaaaaaacggagggagta 247
|||||||||| ||||| ||||
Sbjct: 22 tattaaaaaatggaggtagta 2
>RF01058;MIR806;AAAA02006801.1/520-281 39946:Oryza sativa Indica
Group
Length = 240
Score = 274 bits (138), Expect = 6e-73
Identities = 186/202 (92%)
Strand = Plus / Plus
Query: 28 atagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaaaaacatt 87
|||||||| |||||||| |||||| ||||||||||| |||||||||||||||||| ||
Sbjct: 20 atagatgatgccgttgactttttctcacatgtttgaccattcgtcttattcaaaaagttt 79
Query: 88 acataattataatttattttattatgagttgttttatcactcatagtactttaagtgtga 147
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 80 acgtaattataatttattttgttatgagttgttttatcactcatagtactttaagtgtga 139
Query: 148 tttatattttataaatttgcataaaatttttgaataagacgaatggtcaaacatgtaaga 207
||||||| ||||| |||| |||||||||||||||||||||||||| |||||||||| |||
Sbjct: 140 tttatatcttatacatttacataaaatttttgaataagacgaatgatcaaacatgtgaga 199
Query: 208 aaaagtcaacggtgtcatctat 229
|||||||||||| ||||||||
Sbjct: 200 aaaagtcaacggcttcatctat 221
Score = 89.7 bits (45), Expect = 2e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 80 taaactttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggcatcatcta 21
Query: 229 t 229
|
Sbjct: 20 t 20
Score = 63.9 bits (32), Expect = 1e-09
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 28 atagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaaaaa 83
|||||||| |||||||| |||||| |||||||||| ||||||||||||||||||
Sbjct: 221 atagatgaagccgttgactttttctcacatgtttgatcattcgtcttattcaaaaa 166
>RF01058;MIR806;ABRL01001705.1/38834-39075 65489:Oryza barthii
Length = 242
Score = 272 bits (137), Expect = 2e-72
Identities = 207/229 (90%), Gaps = 1/229 (0%)
Strand = Plus / Plus
Query: 21 ttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaa 80
|||||||||||||||||||||||| |||||| ||||||||||| |||| ||||||||||
Sbjct: 14 ttttttaatagatgacgccgttgactttttctcacatgtttgaccattcatcttattcaa 73
Query: 81 aaacatt-acataattataatttattttattatgagttgttttatcactcatagtacttt 139
||| ||| || ||||||||||||||||| |||||||||||||||| ||||||| ||||||
Sbjct: 74 aaaaatttacgtaattataatttattttgttatgagttgttttattactcataatacttt 133
Query: 140 aagtgtgatttatattttataaatttgcataaaatttttgaataagacgaatggtcaaac 199
||||| ||||||||||||||| |||| |||| |||||||||||||||||| || |||
Sbjct: 134 aagtgagatttatattttatacatttacatattctttttgaataagacgaatagttaaat 193
Query: 200 atgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 194 atggaagaaaaagtcaacggtgtcatctgttaaaaaacggagggagtat 242
Score = 101 bits (51), Expect = 5e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 76 tttttgaataagatgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaa 17
Query: 234 aaa 236
|||
Sbjct: 16 aaa 14
Score = 85.7 bits (43), Expect = 3e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||||||| ||||||| ||||||| |||||| | ||| ||| || |||
Sbjct: 242 atactccctccgttttttaacagatgacaccgttgactttttcttccatatttaactatt 183
Query: 69 cgtcttattcaaaaa 83
|||||||||||||||
Sbjct: 182 cgtcttattcaaaaa 168
>RF01058;MIR806;AAAA02015002.1/42446-42205 39946:Oryza sativa Indica
Group
Length = 242
Score = 270 bits (136), Expect = 9e-72
Identities = 206/228 (90%), Gaps = 1/228 (0%)
Strand = Plus / Plus
Query: 21 ttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaa 80
|||||||||||||||||||||| | ||||| |||||||||||| |||||||||||| ||
Sbjct: 14 ttttttaatagatgacgccgttaacttttttttacatgtttgaccattcgtcttatttaa 73
Query: 81 aaacattacataattataatttattttattatgagttgttttatcactcatagtacttta 140
||| |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 74 aaaatttacgtaattataatttattttgttatgagttgttttatcactcatagttcttta 133
Query: 141 agtgtgatttatattttataaatttgcataaaa-tttttgaataagacgaatggtcaaac 199
|||||||||||||| ||||| ||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 134 agtgtgatttatatcttatatatttgtataaaattttttaaataagacgaatggtcaaac 193
Query: 200 atgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|| | |||||||||||||| |||| ||||||||||||||||| ||||
Sbjct: 194 atatgagaaaaagtcaacgacgtcacctattaaaaaacggaggtagta 241
Score = 95.6 bits (48), Expect = 3e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||| |||||||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 81 taaattttttaaataagacgaatggtcaaacatgtaaaaaaaagttaacggcgtcatcta 22
Query: 229 ttaaaaaa 236
||||||||
Sbjct: 21 ttaaaaaa 14
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| ||||||||||||||||| ||||| |||||| |||||| | ||||||||| ||||
Sbjct: 241 tactacctccgttttttaataggtgacgtcgttgactttttctcatatgtttgaccattc 182
Query: 70 gtcttattcaaaaa 83
|||||||| |||||
Sbjct: 181 gtcttatttaaaaa 168
>RF01058;MIR806;AP004698.3/70112-70351 39947:Oryza sativa Japonica
Group
Length = 240
Score = 270 bits (136), Expect = 9e-72
Identities = 214/240 (89%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| ||||||||||||||||||| ||| |||||| |||||| ||||||||||| |||
Sbjct: 1 atactacctccgttttttaatagataacgtcgttgactttttctcacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||||||||| ||| | |||| ||||||||||||||||| ||||||||| ||||||||||
Sbjct: 61 cgtcttattaaaataatttacgtaattataatttattttgttatgagttattttatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
|||| ||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| |
Sbjct: 121 cataatactttaagtgtgatttatatcttatacatttgcataaaatttttaaataagatg 180
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
|||||| |||||| | |||||||||||||| ||| ||||||||||||||| ||||||||
Sbjct: 181 aatggtaaaacatatgagaaaaagtcaacgacgtcgtctattaaaaaacggtgggagtat 240
Score = 97.6 bits (49), Expect = 7e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 180 aataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacgg 239
|||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct: 69 aataagacgaatggtcaaacatgtgagaaaaagtcaacgacgttatctattaaaaaacgg 10
Query: 240 agggagtat 248
||| |||||
Sbjct: 9 aggtagtat 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||| ||||||||||||||| |||| |||||| |||||| | |||||| || |||
Sbjct: 240 atactcccaccgttttttaatagacgacgtcgttgactttttctcatatgttttaccatt 181
Query: 69 cgtcttattcaaaaa 83
| ||||||| |||||
Sbjct: 180 catcttatttaaaaa 166
>RF01058;MIR806;AACV01013325.1/2226-1987 39947:Oryza sativa Japonica
Group
Length = 240
Score = 268 bits (135), Expect = 4e-71
Identities = 213/239 (89%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| ||||| |||||||||||||||| ||||| | |||||| ||||||||||| |||
Sbjct: 2 tactacctccattttttaatagatgacaccgttaactttttctcacatgtttgaccattt 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
|||| |||||||| |||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 62 atcttgttcaaaaaatttacgtaattataatttattttgttatgagttgttttatcactc 121
Query: 130 atagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacga 189
||| ||| |||| |||||||||||| ||||| ||||||||||||||||||||||| ||||
Sbjct: 122 ataataccttaaatgtgatttatatcttatacatttgcataaaatttttgaataaaacga 181
Query: 190 atggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
|||||||||||||| ||||||||||||||| ||||||||||||||||| | |||||||
Sbjct: 182 atggtcaaacatgtgagaaaaagtcaacggcatcatctattaaaaaacgaaaggagtat 240
Score = 93.7 bits (47), Expect = 1e-18
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| |||||||| |||| ||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 80 taaattttttgaacaagataaatggtcaaacatgtgagaaaaagttaacggtgtcatcta 21
Query: 229 ttaaaaaacggagggagta 247
|||||||| ||||| ||||
Sbjct: 20 ttaaaaaatggaggtagta 2
Score = 85.7 bits (43), Expect = 3e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||| | ||||||||||||||||| |||||||| |||||| ||||||||||| |||
Sbjct: 240 atactcctttcgttttttaatagatgatgccgttgactttttctcacatgtttgaccatt 181
Query: 69 cgtcttattcaaaaa 83
||| |||||||||||
Sbjct: 180 cgttttattcaaaaa 166
>RF01058;MIR806;AACV01010653.1/63649-63888 39947:Oryza sativa
Japonica Group
Length = 240
Score = 264 bits (133), Expect = 6e-70
Identities = 213/240 (88%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||||||||||||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 1 atactacctccgttttttaatagatgacgccgttgactttttctcacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||||||||||||||| |||| ||||| | ||||||||||||||||||||||||| || |
Sbjct: 61 cgtcttattcaaaaaatttacgtaatttttatttattttattatgagttgttttagcatt 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
|||| ||||||||||| ||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 121 catattactttaagtgagatttatatcttatgcattttcataaaatttttgaataagaca 180
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
|||||| |||||||| | || |||| |||| || |||||||||||||||||||||||||
Sbjct: 181 aatggttaaacatgtgataanaagttgacggcgttatctattaaaaaacggagggagtat 240
Score = 127 bits (64), Expect = 8e-29
Identities = 76/80 (95%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 80 taaattttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatcta 21
Query: 229 ttaaaaaacggagggagtat 248
|||||||||||||| |||||
Sbjct: 20 ttaaaaaacggaggtagtat 1
Score = 63.9 bits (32), Expect = 1e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||||||||||||||||||| ||||||| | || || |||||||| || |||
Sbjct: 240 atactccctccgttttttaatagataacgccgtcaacttnttatcacatgtttaaccatt 181
Query: 69 cgtcttattcaaaaa 83
||||||||||||||
Sbjct: 180 tgtcttattcaaaaa 166
>RF01058;MIR806;AAAA02025359.1/45169-44929 39946:Oryza sativa Indica
Group
Length = 241
Score = 264 bits (133), Expect = 6e-70
Identities = 215/241 (89%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||||||||| |||||||||||||||||||| ||| || ||||||||||| |||
Sbjct: 1 atactccctccgtttgttaatagatgacgccgttgactttgtctcacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
| ||||||||||||| |||| |||||||||| ||| | |||||||| | | |||||||
Sbjct: 61 catcttattcaaaaaatttacgtaattataatatatatagttatgagtagatgtatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataaga-c 187
|||| ||||||||||||||| ||||| |||| ||||| ||||||||||||||||||| |
Sbjct: 121 cataatactttaagtgtgatatatatcgtatacatttgtataaaatttttgaataagacc 180
Query: 188 gaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 181 gaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacggagggagta 240
Query: 248 t 248
|
Sbjct: 241 t 241
Score = 111 bits (56), Expect = 5e-24
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||||| |||||||||||||||| ||| ||||||||||| ||||||||
Sbjct: 80 taaattttttgaataagatgaatggtcaaacatgtgagacaaagtcaacggcgtcatcta 21
Query: 229 ttaaaaaacggagggagtat 248
|||| |||||||||||||||
Sbjct: 20 ttaacaaacggagggagtat 1
Score = 103 bits (52), Expect = 1e-21
Identities = 71/76 (93%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 241 atactccctccgttttttaatagatgacgccgttgactttttctcacatgtttgaccatt 182
Query: 69 c-gtcttattcaaaaa 83
| ||||||||||||||
Sbjct: 181 cggtcttattcaaaaa 166
>RF01058;MIR806;AACV01018446.1/20552-20792 39947:Oryza sativa
Japonica Group
Length = 241
Score = 264 bits (133), Expect = 6e-70
Identities = 215/241 (89%), Gaps = 1/241 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaa-tagatgacgccgttgattttttcgtacatgtttgacaat 67
|||||||||| ||||||||| ||||| |||||||||| |||||| ||||||||||| ||
Sbjct: 1 atactccctctgttttttaaatagataacgccgttgactttttctcacatgtttgaccat 60
Query: 68 tcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcac 127
|| ||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 61 tcatcttattcaaaaaatttacgtaattataatttattttgttatgagttgttttatcac 120
Query: 128 tcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagac 187
||||||||||||||||| |||||||| ||||| |||| ||||| ||||||||| |||||
Sbjct: 121 acatagtactttaagtgtaatttatatcttatacatttacataatatttttgaacaagac 180
Query: 188 gaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
||||||||||| |||| |||||||||||| | || |||||||||||| |||||||||||
Sbjct: 181 gaatggtcaaatatgtgagaaaaagtcaatgacgttatctattaaaaatcggagggagta 240
Query: 248 t 248
|
Sbjct: 241 t 241
Score = 97.6 bits (49), Expect = 7e-20
Identities = 74/81 (91%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||||| |||||||||||||||| ||||||||||||||| || |||||
Sbjct: 81 taaattttttgaataagatgaatggtcaaacatgtgagaaaaagtcaacggcgttatcta 22
Query: 229 -ttaaaaaacggagggagtat 248
||||||||| ||||||||||
Sbjct: 21 tttaaaaaacagagggagtat 1
Score = 71.9 bits (36), Expect = 4e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||| |||||||||||| ||| | |||| |||||| |||| |||||| |||
Sbjct: 241 atactccctccgatttttaatagataacgtcattgactttttctcacatatttgaccatt 182
Query: 69 cgtcttattcaaaaacatta 88
|||||| |||||||| ||||
Sbjct: 181 cgtcttgttcaaaaatatta 162
>RF01058;MIR806;AP008208.1/21166183-21165939 39947:Oryza sativa
Japonica Group
Length = 245
Score = 262 bits (132), Expect = 2e-69
Identities = 216/244 (88%), Gaps = 5/244 (2%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| |||||||||||||||||||||||||||||| |||||| |||||||||| ||||
Sbjct: 2 tactacctccgttttttaatagatgacgccgttgactttttctcgcatgtttgaccattc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
|| ||||||||||| |||| |||||||||||||||||||||||||| | |||||||||
Sbjct: 62 gttttattcaaaaaatttacggaattataatttattttattatgagttatcttatcactc 121
Query: 130 atagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacga 189
|||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||
Sbjct: 122 atagtactttaagtgtgattcatatcttatacatttgcataaaatttttgaataagacga 181
Query: 190 -----atggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggaggga 244
| ||| |||||||| ||||||||||||||||||||||||||| ||| ||||||
Sbjct: 182 gtggtacggttaaacatgtgggaaaaagtcaacggtgtcatctattaacaaatagaggga 241
Query: 245 gtat 248
||||
Sbjct: 242 gtat 245
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 80 taaattttttgaataaaacgaatggtcaaacatgcgagaaaaagtcaacggcgtcatcta 21
Query: 229 ttaaaaaacggagggagta 247
|||||||||||||| ||||
Sbjct: 20 ttaaaaaacggaggtagta 2
Score = 50.1 bits (25), Expect = 2e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgttt 61
|||||||||| ||| |||||||||||| ||||||| |||||| ||||||||
Sbjct: 245 atactccctctatttgttaatagatgacaccgttgactttttcccacatgttt 193
>RF01058;MIR806;AP008217.1/895830-895590 39947:Oryza sativa Japonica
Group
Length = 241
Score = 262 bits (132), Expect = 2e-69
Identities = 204/228 (89%)
Strand = Plus / Plus
Query: 21 ttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaa 80
|||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||| ||
Sbjct: 14 ttttttaatagatgacgccgttgactttttctcacatgtttgaccgttcgttttattaaa 73
Query: 81 aaacattacataattataatttattttattatgagttgttttatcactcatagtacttta 140
||| |||| |||||||||||||||||||||||||||||||||| | | |||||| ||||
Sbjct: 74 aaaaattatgtaattataatttattttattatgagttgttttataatttatagtatttta 133
Query: 141 agtgtgatttatattttataaatttgcataaaatttttgaataagacgaatggtcaaaca 200
|||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||| |
Sbjct: 134 agtgtgatttatatcttatacatttgcataaaatttttgaataagatgaatggtcaaata 193
Query: 201 tgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
||| ||||||| | ||||| |||||||||||| |||||||| ||||||
Sbjct: 194 tgtgagaaaaaattaacggcgtcatctattaagaaacggagagagtat 241
Score = 85.7 bits (43), Expect = 3e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
||||| ||||| ||||| |||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 76 ttttttaataaaacgaacggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaa 17
Query: 234 aaa 236
|||
Sbjct: 16 aaa 14
Score = 85.7 bits (43), Expect = 3e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||| |||||||| |||||||||||||||||| |||||||| |||| |||||| |||
Sbjct: 241 atactctctccgtttcttaatagatgacgccgttaattttttctcacatatttgaccatt 182
Query: 69 cgtcttattcaaaaa 83
| |||||||||||||
Sbjct: 181 catcttattcaaaaa 167
>RF01058;MIR806;AL662986.3/67265-67504 39947:Oryza sativa Japonica
Group
Length = 240
Score = 260 bits (131), Expect = 9e-69
Identities = 212/239 (88%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||||||||||||||||||||||||||||| |||||| | ||||||||| |||
Sbjct: 1 atactacctccgttttttaatagatgacgccgttgactttttctcaaatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||||||||||||||| ||| |||||||||| ||| | | ||||||||||||||||||
Sbjct: 61 cgtcttattcaaaaaatgtacgtaattataatctatctagtcatgagttgttttatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
|||||||||||||||||||||||||| ||||| |||| ||| ||||||| || |||||
Sbjct: 121 catagtactttaagtgtgatttatatcttatacatttacattttatttttgtattagacg 180
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|||||||||| || | ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 181 aatggtcaaatatatgagaaaaagtcaacggcgtcatctattaaaaaacggagggagta 239
Score = 117 bits (59), Expect = 8e-26
Identities = 71/75 (94%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
|||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||
Sbjct: 75 tttttgaataagacgaatggtcaaacatttgagaaaaagtcaacggcgtcatctattaaa 16
Query: 234 aaacggagggagtat 248
||||||||| |||||
Sbjct: 15 aaacggaggtagtat 1
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
||||||||||||||||||||||||||||||||||| |||||| | || |||||| ||||
Sbjct: 239 tactccctccgttttttaatagatgacgccgttgactttttctcatatatttgaccattc 180
Query: 70 gtcttattcaaaaa 83
|||| || ||||||
Sbjct: 179 gtctaatacaaaaa 166
>RF01058;MIR806;AACV01023803.1/7242-7003 39947:Oryza sativa Japonica
Group
Length = 240
Score = 258 bits (130), Expect = 3e-68
Identities = 211/238 (88%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| ||| |||| |||||| |||||| ||||||| |||||| ||||||||||| ||||
Sbjct: 2 tactaccttcgttctttaattgatgacaccgttgactttttctcacatgtttgaccattc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
||||||||| |||| |||| ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 62 gtcttattccaaaaatttacgtaattgtaatttattttgatatgagttgttttatcactc 121
Query: 130 atagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacga 189
||||||||||||||||||||||||| ||||| ||||| | |||| |||||||||||||
Sbjct: 122 atagtactttaagtgtgatttatatcttatatatttgtaaaaaaaaattgaataagacga 181
Query: 190 atggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
||||||||| |||||||||||| | ||||| |||||||||||||||||||||||||||
Sbjct: 182 atggtcaaatatgtaagaaaaaattaacggcgtcatctattaaaaaacggagggagta 239
Score = 109 bits (55), Expect = 2e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
||||||||||||||||||||||||||||||||| |||||||| ||||| |||||| ||||
Sbjct: 239 tactccctccgttttttaatagatgacgccgttaattttttcttacatatttgaccattc 180
Query: 70 gtcttattcaa 80
|||||||||||
Sbjct: 179 gtcttattcaa 169
Score = 101 bits (51), Expect = 5e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 80 taaatttttggaataagacgaatggtcaaacatgtgagaaaaagtcaacggtgtcatcaa 21
Query: 229 ttaaaaaacggagggagta 247
||||| |||| ||| ||||
Sbjct: 20 ttaaagaacgaaggtagta 2
>RF01058;MIR806;AAAA02029104.1/16-259 39946:Oryza sativa Indica
Group
Length = 244
Score = 254 bits (128), Expect = 5e-67
Identities = 216/244 (88%), Gaps = 6/244 (2%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||||||||||||||||||||| | |||||| ||||||||||| ||
Sbjct: 1 atactccctccgttttttaatagatgacgccgttaactttttctcacatgtttgaccatg 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||||||||| ||||| | || ||||||||||||||||| |||| ||||||||||||||
Sbjct: 61 cgtcttatttaaaaaattcacgtaattataatttattttgctatgggttgttttatcact 120
Query: 129 catagtactttaa-----gtgtgatttatattttataaatttgcataaaatttttgaata 183
||||||||||||| || ||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 121 catagtactttaatttaagtatgatt-atatcttatacatttgcataaaatttttgaata 179
Query: 184 agacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggaggg 243
|||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||
Sbjct: 180 agacgaatggtcaaacatgtgagaaaaagtcaatagcgtcatctattaaaaaacggaggt 239
Query: 244 agta 247
||||
Sbjct: 240 agta 243
Score = 109 bits (55), Expect = 2e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
||||| ||||||||| |||||||||||||| ||||||||| ||||| |||||||||||||
Sbjct: 75 tttttaaataagacgcatggtcaaacatgtgagaaaaagttaacggcgtcatctattaaa 16
Query: 234 aaacggagggagtat 248
|||||||||||||||
Sbjct: 15 aaacggagggagtat 1
Score = 91.7 bits (46), Expect = 5e-18
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| |||||||||||||||||||||||| |||| |||||| ||||||||||| ||||
Sbjct: 243 tactacctccgttttttaatagatgacgctattgactttttctcacatgtttgaccattc 184
Query: 70 gtcttattcaaaaa 83
||||||||||||||
Sbjct: 183 gtcttattcaaaaa 170
>RF01058;MIR806;AAAA02027859.1/37306-37546 39946:Oryza sativa Indica
Group
Length = 241
Score = 254 bits (128), Expect = 5e-67
Identities = 200/224 (89%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||||||||||||||| |||| ||||| |||||| ||||||||||| ||||
Sbjct: 2 tactccctccgttttttaatagataacgctgttgactttttctcacatgtttgaccattc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
|| |||||||||| ||| ||| ||||||||||||| |||||||||||||||||||||
Sbjct: 62 gttttattcaaaatatttatgtaactataatttattttgttatgagttgttttatcactc 121
Query: 130 atagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacga 189
|||||||||||| | |||||||||| ||||| |||||||||||||||||||||||||| |
Sbjct: 122 atagtactttaaatatgatttatatcttatatatttgcataaaatttttgaataagacaa 181
Query: 190 atggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
||||||||| |||| ||||||||||||| | || ||||||||||
Sbjct: 182 atggtcaaatatgtgagaaaaagtcaacagcgttatctattaaa 225
Score = 105 bits (53), Expect = 3e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 175 ttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaa 234
|||||||||| |||||||||||||||||| ||||||||||||| | || |||||||||||
Sbjct: 74 ttttgaataaaacgaatggtcaaacatgtgagaaaaagtcaacagcgttatctattaaaa 15
Query: 235 aacggagggagta 247
|||||||||||||
Sbjct: 14 aacggagggagta 2
Score = 56.0 bits (28), Expect = 3e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 24 tttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaaaaa 83
|||||||||| |||| ||||| |||||| |||| |||||| ||| ||||||||||||||
Sbjct: 225 tttaatagataacgctgttgactttttctcacatatttgaccatttgtcttattcaaaaa 166
>RF01058;MIR806;AJ315898.1/1403-1164 4530:Oryza sativa (rice)
Length = 240
Score = 254 bits (128), Expect = 5e-67
Identities = 209/236 (88%)
Strand = Plus / Plus
Query: 13 tccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtc 72
|||||||||||||||||||||||| ||||||| |||||| |||||||| || |||||||
Sbjct: 5 tccctccgttttttaatagatgacaccgttgactttttctcacatgtttaaccattcgtc 64
Query: 73 ttattcaaaaacattacataattataatttattttattatgagttgttttatcactcata 132
||||||||||| ||| ||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 65 ttattcaaaaaatttatgtaattataatttattttgttatgagttattttatcactcata 124
Query: 133 gtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacgaatg 192
|||||| || | |||||||||| |||| |||||||||||||||||| ||||||||||||
Sbjct: 125 gtacttcaaatatgatttatatcatatacatttgcataaaatttttggataagacgaatg 184
Query: 193 gtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
||||||||||| |||||||| || || | ||||||||||||||||||| |||||
Sbjct: 185 gtcaaacatgtgagaaaaagctaatggcattatctattaaaaaacggaggtagtat 240
Score = 131 bits (66), Expect = 5e-30
Identities = 75/78 (96%)
Strand = Plus / Minus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatc 226
|||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 82 cataaattttttgaataagacgaatggttaaacatgtgagaaaaagtcaacggtgtcatc 23
Query: 227 tattaaaaaacggaggga 244
||||||||||||||||||
Sbjct: 22 tattaaaaaacggaggga 5
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| ||||||||||||||||||| | ||| || |||||| ||||||||||| |||
Sbjct: 240 atactacctccgttttttaatagataatgccattagctttttctcacatgtttgaccatt 181
Query: 69 cgtcttattcaaaaa 83
|||||||| ||||||
Sbjct: 180 cgtcttatccaaaaa 166
>RF01058;MIR806;AAAA02025180.1/12656-12895 39946:Oryza sativa Indica
Group
Length = 240
Score = 252 bits (127), Expect = 2e-66
Identities = 203/227 (89%), Gaps = 1/227 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
||||||||| ||||||||||||||||| |||| | |||||| ||||||||| ||||
Sbjct: 2 tactccctctattttttaatagatgacgtcgttaactttttctcgcatgtttgatcattc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
|||||||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||
Sbjct: 62 gtcttattcaaaaaatttacataattataatt-attttgttatgagttgttttattactc 120
Query: 130 atagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacga 189
||| ||||||||||||||||||||| ||||| |||| |||||||||||| ||||||||||
Sbjct: 121 ataatactttaagtgtgatttatatcttatacatttacataaaattttttaataagacga 180
Query: 190 atggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaa 236
|| ||||||||| | ||||||||||||||| ||||||||||||||||
Sbjct: 181 atagtcaaacatatgagaaaaagtcaacggcgtcatctattaaaaaa 227
Score = 85.7 bits (43), Expect = 3e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||
Sbjct: 80 taaattttttgaataagacgaatgatcaaacatgcgagaaaaagttaacgacgtcatcta 21
Query: 229 ttaaaaaacggagggagta 247
|||||||| |||||||||
Sbjct: 20 ttaaaaaatagagggagta 2
Score = 77.8 bits (39), Expect = 7e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 21 ttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaa 80
|||||||||||||||||||||||| |||||| | ||||||||| |||||||||||| ||
Sbjct: 227 ttttttaatagatgacgccgttgactttttctcatatgtttgactattcgtcttattaaa 168
Query: 81 aaa 83
|||
Sbjct: 167 aaa 165
>RF01058;MIR806;AACV01006082.1/370-132 39947:Oryza sativa Japonica
Group
Length = 239
Score = 250 bits (126), Expect = 8e-66
Identities = 211/238 (88%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||
Sbjct: 2 tactccctccgtttttaaatagatgacgccgttgactttttctcacatgtttgaccattc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
|||| ||||||||| |||| |||||||| || ||||| ||||||||||||||||||||
Sbjct: 62 gtctaattcaaaaaatttacgtaattata-ttaattttgttatgagttgttttatcacta 120
Query: 130 atagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacga 189
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 121 atagtactttaagtgtgatttatatcttatacatttgcataaaatttttgaataagacga 180
Query: 190 atggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|||| |||||||| |||| || | || | |||||||||||||||||||| ||||
Sbjct: 181 atgggtaaacatgtgagaatttgtagatggcgccatctattaaaaaacggaggtagta 238
Score = 117 bits (59), Expect = 8e-26
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 80 taaattttttgaattagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatcta 21
Query: 229 ttaaaaaacggagggagta 247
|| ||||||||||||||||
Sbjct: 20 tttaaaaacggagggagta 2
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgcc 39
|||| |||||||||||||||||||| ||||
Sbjct: 238 tactacctccgttttttaatagatggcgcc 209
>RF01058;MIR806;AACV01020243.1/3803-3577 39947:Oryza sativa Japonica
Group
Length = 227
Score = 250 bits (126), Expect = 8e-66
Identities = 207/234 (88%), Gaps = 15/234 (6%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgatttttt-cgtacatgtttgacaatt 68
||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||
Sbjct: 2 tactccctccgttttttaatagatgacgccgttgatttttttcttacatgtttgaccatt 61
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
| ||||||| ||||||| |||| ||||||||||||||||||||||||
Sbjct: 62 catcttatttaaaaaca--acat------------ttttattatgagttgttttatcacc 107
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
|||||||||||||||||||||||||| ||||| |||| ||||| |||||||||||||||
Sbjct: 108 catagtactttaagtgtgatttatatcttatacatttatataaagtttttgaataagacg 167
Query: 189 aatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagg 242
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 168 aatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacggagg 221
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 15 cctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtctt 74
|||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||
Sbjct: 221 cctccgttttttaatagatgacgccgttgactttttctcacatgtttgaccattcgtctt 162
Query: 75 attcaaaaacattacataa 93
|||||||||| ||| ||||
Sbjct: 161 attcaaaaactttatataa 143
Score = 101 bits (51), Expect = 5e-21
Identities = 70/75 (93%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaag-tcaacggtgtcatctattaa 232
||||| ||||||| |||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 76 tttttaaataagatgaatggtcaaacatgtaagaaaaaaatcaacggcgtcatctattaa 17
Query: 233 aaaacggagggagta 247
|||||||||||||||
Sbjct: 16 aaaacggagggagta 2
>RF01058;MIR806;AACV01016164.1/22716-22476 39947:Oryza sativa
Japonica Group
Length = 241
Score = 244 bits (123), Expect = 5e-64
Identities = 200/223 (89%), Gaps = 2/223 (0%)
Strand = Plus / Plus
Query: 16 ctccgttttttaa-tagatgacgccgttgattttttcgtacatgtttga-caattcgtct 73
||||||||||||| |||| ||||||||||| |||||| |||||||||| | ||||||||
Sbjct: 8 ctccgttttttaaatagaggacgccgttgactttttctcacatgtttgaaccattcgtct 67
Query: 74 tattcaaaaacattacataattataatttattttattatgagttgttttatcactcatag 133
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 68 tattcaaaaaatttacataattataatttattttgttatgagttgttttatcactcatgg 127
Query: 134 tactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacgaatgg 193
|||||||||| |||||| ||| ||||| ||| | ||||| ||||||||||||||||||||
Sbjct: 128 tactttaagtatgatttctatcttatacattcgtataaattttttgaataagacgaatgg 187
Query: 194 tcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaa 236
|||||||| | ||||||||||||||| ||||| | ||||||||
Sbjct: 188 tcaaacatatgagaaaaagtcaacggcgtcatgttttaaaaaa 230
Score = 85.7 bits (43), Expect = 3e-16
Identities = 69/75 (92%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggt-caaacatgtaagaaaaagtcaacggtgtcatct 227
|||| ||||||||||||||||||||| ||||||||| ||||||||||||||| ||| |||
Sbjct: 82 taaattttttgaataagacgaatggttcaaacatgtgagaaaaagtcaacggcgtcctct 23
Query: 228 a-ttaaaaaacggag 241
| |||||||||||||
Sbjct: 22 atttaaaaaacggag 8
Score = 69.9 bits (35), Expect = 2e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 21 ttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaa 80
|||||||| | ||||||||||||| |||||| | ||||||||| |||||||||||||||
Sbjct: 230 ttttttaaaacatgacgccgttgactttttctcatatgtttgaccattcgtcttattcaa 171
Query: 81 aaa 83
|||
Sbjct: 170 aaa 168
>RF01058;MIR806;AAAA02020521.1/45690-45452 39946:Oryza sativa Indica
Group
Length = 239
Score = 242 bits (122), Expect = 2e-63
Identities = 200/226 (88%)
Strand = Plus / Plus
Query: 22 tttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaaa 81
||||||||||||||||| ||||| ||||| |||||||| | |||| |||||||||||
Sbjct: 13 tttttaatagatgacgctgttgactttttatcacatgtttagccattcatcttattcaaa 72
Query: 82 aacattacataattataatttattttattatgagttgttttatcactcatagtactttaa 141
|| |||| ||||||||||||||||| |||||||||||||||| ||| ||||||||||||
Sbjct: 73 aaatttacgtaattataatttattttgttatgagttgttttattacttatagtactttaa 132
Query: 142 gtgtgatttatattttataaatttgcataaaatttttgaataagacgaatggtcaaacat 201
|||||||||||| ||||| ||||| ||||||||||||||||||| ||||||||||| ||
Sbjct: 133 atgtgatttatatcttatacatttgtataaaatttttgaataagatgaatggtcaaatat 192
Query: 202 gtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|| ||||||||||||||| || |||||||| || ||||||||||||
Sbjct: 193 gtgagaaaaagtcaacggcgttatctattataagacggagggagta 238
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||| || |||||||| |||||||||| |||||| |||| |||||| ||||
Sbjct: 238 tactccctccgtcttataatagataacgccgttgactttttctcacatatttgaccattc 179
Query: 70 gtcttattcaaaaa 83
|||||||||||||
Sbjct: 178 atcttattcaaaaa 165
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||||| |||||| |||||||| | ||||||||||| | ||||||||
Sbjct: 79 taaattttttgaataagatgaatggctaaacatgtgataaaaagtcaacagcgtcatcta 20
Query: 229 ttaaaaa 235
|||||||
Sbjct: 19 ttaaaaa 13
>RF01058;MIR806;AAAA02006447.1/12128-12369 39946:Oryza sativa Indica
Group
Length = 242
Score = 240 bits (121), Expect = 8e-63
Identities = 215/244 (88%), Gaps = 8/244 (3%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| ||||||||||||||||||| | ||||||| |||||| ||||||||||| |||
Sbjct: 2 tactacctccgttttttaatagataataccgttgactttttctcacatgtttgaccattt 61
Query: 70 gtcttattcaaaaacatt-acataattataatttattttattatgagttgttttatcact 128
|||||||||||||| ||| || |||||||||||| || |||| |||||||||||||||
Sbjct: 62 gtcttattcaaaaaaatttacgtaattataattt---ttgttataagttgttttatcact 118
Query: 129 cat----agtactttaagtgtgatttatattttataaatttgcataaaatttttgaataa 184
||| ||||||||||||||||||||||| || || |||||||||||||||||||||||
Sbjct: 119 catgcatagtactttaagtgtgatttatatcttttacatttgcataaaatttttgaataa 178
Query: 185 gacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggaggga 244
||||||||||||||| | | ||||||||||||||| |||||||||||||||||| |||||
Sbjct: 179 gacgaatggtcaaacttatgagaaaaagtcaacggcgtcatctattaaaaaacgaaggga 238
Query: 245 gtat 248
||||
Sbjct: 239 gtat 242
Score = 107 bits (54), Expect = 8e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
|||||||||||||| ||||||||||||||| |||||||||||||||| | ||||||||||
Sbjct: 75 tttttgaataagacaaatggtcaaacatgtgagaaaaagtcaacggtattatctattaaa 16
Query: 234 aaacggagggagta 247
||||||||| ||||
Sbjct: 15 aaacggaggtagta 2
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||| |||||||||||||||||||||||||| |||||| | | ||||||| |||
Sbjct: 242 atactcccttcgttttttaatagatgacgccgttgactttttctcataagtttgaccatt 183
Query: 69 cgtcttattcaaaaa 83
|||||||||||||||
Sbjct: 182 cgtcttattcaaaaa 168
>RF01058;MIR806;AACV01015235.1/48905-48666 39947:Oryza sativa
Japonica Group
Length = 240
Score = 238 bits (120), Expect = 3e-62
Identities = 189/212 (89%)
Strand = Plus / Plus
Query: 13 tccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtc 72
||||||||||||||||||||||||||| |||| |||||| || |||||||| |||||||
Sbjct: 5 tccctccgttttttaatagatgacgccattgactttttctcacttgtttgaccattcgtc 64
Query: 73 ttattcaaaaacattacataattataatttattttattatgagttgttttatcactcata 132
||||||||||| |||| ||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 65 ttattcaaaaaatttacgtaattataatttattttgttatgggttgttttatcacttata 124
Query: 133 gtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacgaatg 192
||||||||| |||||||||||| ||||| ||| ||||||||||||||||||||||||| |
Sbjct: 125 gtactttaattgtgatttatatcttatacattagcataaaatttttgaataagacgaacg 184
Query: 193 gtcaaacatgtaagaaaaagtcaacggtgtca 224
| ||||||||| ||||| ||||||| ||||
Sbjct: 185 ggcaaacatgtttaaaaaaatcaacggcgtca 216
Score = 111 bits (56), Expect = 5e-24
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||||||||||||||||||| || |||||||||||| || ||||||||
Sbjct: 80 taaattttttgaataagacgaatggtcaaacaagtgagaaaaagtcaatggcgtcatcta 21
Query: 229 ttaaaaaacggaggga 244
||||||||||||||||
Sbjct: 20 ttaaaaaacggaggga 5
Score = 54.0 bits (27), Expect = 1e-06
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 33 tgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaaaaa 83
|||||||||||||||||| ||||||||| | |||||||||||||||||
Sbjct: 216 tgacgccgttgatttttttaaacatgtttgcccgttcgtcttattcaaaaa 166
>RF01058;MIR806;AP008214.1/25031210-25031448 39947:Oryza sativa
Japonica Group
Length = 239
Score = 238 bits (120), Expect = 3e-62
Identities = 206/232 (88%), Gaps = 2/232 (0%)
Strand = Plus / Plus
Query: 18 ccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttatt 77
||||||||||||||||||| ||||||| ||||| || ||| ||||| ||||||||||||
Sbjct: 9 ccgttttttaatagatgacaccgttgactttttt-tatatgcttgaccattcgtcttatt 67
Query: 78 caaaaaca-ttacataattataatttattttattatgagttgttttatcactcatagtac 136
|||||| | |||| ||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 68 caaaaaaaattacgtaattataatttattttgttatgagttggtttatcactcatagtat 127
Query: 137 tttaagtgtgatttatattttataaatttgcataaaatttttgaataagacgaatggtca 196
|||||||||||||||||| ||||| |||| | || ||||| |||||||||||||||||
Sbjct: 128 tttaagtgtgatttatatcttatatatttataaaatgtttttaaataagacgaatggtca 187
Query: 197 aacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
||||||| | ||||| ||||||| ||| ||||||||||||||||||||||||
Sbjct: 188 aacatgtgataaaaaatcaacggcgtcgtctattaaaaaacggagggagtat 239
Score = 109 bits (55), Expect = 2e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||
Sbjct: 239 atactccctccgttttttaatagacgacgccgttgattttttatcacatgtttgaccatt 180
Query: 69 cgtcttattcaaaaacatt 87
||||||||| |||||||||
Sbjct: 179 cgtcttatttaaaaacatt 161
Score = 99.6 bits (50), Expect = 2e-20
Identities = 63/66 (95%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
|||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||
Sbjct: 73 tttttgaataagacgaatggtcaagcatataa-aaaaagtcaacggtgtcatctattaaa 15
Query: 234 aaacgg 239
||||||
Sbjct: 14 aaacgg 9
>RF01062;MIR812;AACV01003781.1/17991-17821 39947:Oryza sativa
Japonica Group
Length = 171
Score = 236 bits (119), Expect = 1e-61
Identities = 146/155 (94%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
||||||| |||||||||||||||||| |||| ||||||||||||||||| |||||||||
Sbjct: 157 gtttgaccattcgtcttattcaaaaaatttacgtaattataatttattttgttatgagtt 98
Query: 118 gttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaatttt 177
||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 97 gttttatgactcatagtactttaagtgttatttatattttatacatttgcataaaatttt 38
Query: 178 tgaataagacgaatggtcaaacatgtaagaaaaag 212
||||||||| |||||||||||||||||||||||||
Sbjct: 37 tgaataagatgaatggtcaaacatgtaagaaaaag 3
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaac 199
|||| ||||||||||||||||||||||||||
Sbjct: 127 taaattttttgaataagacgaatggtcaaac 157
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 46 tttttcgtacatgtttgacaattcgtcttattcaaaaa 83
|||||| |||||||||||| |||| |||||||||||||
Sbjct: 4 tttttcttacatgtttgaccattcatcttattcaaaaa 41
>RF01058;MIR806;AAAA02028161.1/12844-12607 39946:Oryza sativa Indica
Group
Length = 238
Score = 232 bits (117), Expect = 2e-60
Identities = 196/217 (90%), Gaps = 4/217 (1%)
Strand = Plus / Plus
Query: 21 ttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaa 80
|||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||
Sbjct: 13 ttttttaatagatgacgccgttgactttttctcacatgtttgaccattcgtcttattcaa 72
Query: 81 aaacattacataattataatttattttattatgagttgttttatcactcatagtacttta 140
||| ||| |||||||||||||| || ||||||||||||||| ||||||||||||||||
Sbjct: 73 aaaatttatgtaattataatttatcttgttatgagttgttttaccactcatagtacttta 132
Query: 141 agtgtgatttatattttataaatttgcataaaatttttgaataagacgaatggtcaaaca 200
||||||| ||||| | |||| | ||| ||||||||||||||||||||||||||| |||||
Sbjct: 133 agtgtga-ttata-tctataca-ttgtataaaatttttgaataagacgaatggttaaaca 189
Query: 201 tgtaagaaaaagtcaac-ggtgtcatctattaaaaaa 236
||| ||||||||||||| || ||||||||||||||||
Sbjct: 190 tgtgagaaaaagtcaacgggcgtcatctattaaaaaa 226
Score = 115 bits (58), Expect = 3e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatc 226
|||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 82 cataaattttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatc 23
Query: 227 tattaaaaaa 236
||||||||||
Sbjct: 22 tattaaaaaa 13
Score = 71.9 bits (36), Expect = 4e-12
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 21 ttttttaatagatgacgcc-gttgattttttcgtacatgtttgacaattcgtcttattca 79
||||||||||||||||||| ||||| |||||| |||||||| || ||||||||||||||
Sbjct: 226 ttttttaatagatgacgcccgttgactttttctcacatgtttaaccattcgtcttattca 167
Query: 80 aaaa 83
||||
Sbjct: 166 aaaa 163
>RF01058;MIR806;AP008211.1/13451986-13451747 39947:Oryza sativa
Japonica Group
Length = 240
Score = 232 bits (117), Expect = 2e-60
Identities = 212/241 (87%), Gaps = 2/241 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| ||||||||||| |||||||||||||||||| ||||| ||| ||||||| |||
Sbjct: 1 atactacctccgtttttcaatagatgacgccgttgactttttatcacacgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 61 cgtcttattcaaaaattttacgtaattataatttattttgttatgagttgttttatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaa-tttttgaataagac 187
|| ||||||||||| ||||||||| | |||| |||| ||||||| ||||| ||||| ||
Sbjct: 121 caaagtactttaagcatgatttata-tctatacatttacataaaattttttaaataatac 179
Query: 188 gaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|||||||||||||| | |||||||||||| |||||||||||||||| ||||||||||
Sbjct: 180 gaatggtcaaacatatgttcaaaagtcaacggcgtcatctattaaaaaatggagggagta 239
Query: 248 t 248
|
Sbjct: 240 t 240
Score = 111 bits (56), Expect = 5e-24
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
||||||||||||||||||||||||||||||| ||| | ||||||||||||| ||||||||
Sbjct: 80 taaaatttttgaataagacgaatggtcaaacgtgtgataaaaagtcaacggcgtcatcta 21
Query: 229 ttaaaaaacggagggagtat 248
|| ||||||||||| |||||
Sbjct: 20 ttgaaaaacggaggtagtat 1
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||||| |||||||||||||||||||||||| |||| | ||||||||| |||
Sbjct: 240 atactccctccattttttaatagatgacgccgttgacttttgaacatatgtttgaccatt 181
Query: 69 cgtcttattcaaaaa 83
||| ||||| |||||
Sbjct: 180 cgtattatttaaaaa 166
>RF01062;MIR812;AAAA02011555.1/18196-18026 39946:Oryza sativa Indica
Group
Length = 171
Score = 228 bits (115), Expect = 3e-59
Identities = 158/171 (92%), Gaps = 1/171 (0%)
Strand = Plus / Minus
Query: 44 attttttcgtacatgtttgacaattcgtcttattcaaaaacattacataattataattta 103
|||||||| ||||||||||| |||||| ||||| ||||| ||||| |||||||||||||
Sbjct: 170 attttttctcacatgtttgactattcgtgttattaaaaaa-attacgtaattataattta 112
Query: 104 ttttattatgagttgttttatcactcatagtactttaagtgtgatttatattttataaat 163
|||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct: 111 ttttgttatgagttgttttatcactcatagtaccttaagtgtgatttatatcttatacat 52
Query: 164 ttgcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 51 ttgcataaattttttgaataagacgaatggtcaaacatgtgagaaaaagtc 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
||||||||||| ||||||||||||||||||
Sbjct: 12 acatgtttgaccattcgtcttattcaaaaa 41
Score = 44.1 bits (22), Expect = 0.001
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaa 211
||||| ||||| |||||| ||||||||||| |||||||
Sbjct: 131 ttttttaataacacgaatagtcaaacatgtgagaaaaa 168
>RF01058;MIR806;AAAA02022811.1/27908-27665 39946:Oryza sativa Indica
Group
Length = 244
Score = 224 bits (113), Expect = 5e-58
Identities = 218/245 (88%), Gaps = 6/245 (2%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||||| ||||||||||||||||| ||||| |||||| ||||||||||| |||
Sbjct: 1 atactccctcccttttttaatagatgacgttgttgactttttctcacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||||||||||||||| |||| ||||||||||||||||| |||||||||| |||||||||
Sbjct: 61 cgtcttattcaaaaaatttacgtaattataatttattttgttatgagttg-tttatcact 119
Query: 129 ca-tagtactttaagtgtg-atttat-at-tttataaatttgcataaaatttttgaat-a 183
| |||||||||||||||| |||||| || || ||| |||||| ||||||||| |||| |
Sbjct: 120 aattagtactttaagtgtgcatttatcatcttcatacatttgcctaaaattttagaatca 179
Query: 184 agacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggaggg 243
|||| ||||||||||||||| ||||||||||||| | ||||||||||||||||||||||
Sbjct: 180 agacaaatggtcaaacatgtgagaaaaagtcaacagcgtcatctattaaaaaacggaggt 239
Query: 244 agtat 248
|||||
Sbjct: 240 agtat 244
Score = 111 bits (56), Expect = 5e-24
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 80 taaattttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacaacgtcatcta 21
Query: 229 ttaaaaaacggagggagtat 248
|||||||| |||||||||||
Sbjct: 20 ttaaaaaagggagggagtat 1
Score = 75.8 bits (38), Expect = 3e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||||||||||||||||||||||| ||||| |||||| ||||||||||| |||
Sbjct: 244 atactacctccgttttttaatagatgacgctgttgactttttctcacatgtttgaccatt 185
Query: 69 cgtctt 74
|||||
Sbjct: 184 tgtctt 179
>RF01062;MIR812;AP004256.3/58868-59040 39947:Oryza sativa Japonica
Group
Length = 173
Score = 222 bits (112), Expect = 2e-57
Identities = 139/148 (93%)
Strand = Plus / Minus
Query: 67 ttcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatca 126
||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||
Sbjct: 148 ttcgtcttattcaaaaaatttacgtaattataatttattttgttatgggttgttttatca 89
Query: 127 ctcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataaga 186
|||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 88 ctcatattactttaagtgtgatttatatcttatacatttgcataaaatttttgaataaga 29
Query: 187 cgaatggtcaaacatgtaagaaaaagtc 214
|||| |||||||||||||||||||||||
Sbjct: 28 cgaaaggtcaaacatgtaagaaaaagtc 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 46 tttttcgtacatgtttgacaattcgtcttattcaaaaa 83
|||||| |||||||||||| |||||||||||||||||
Sbjct: 4 tttttcttacatgtttgacctttcgtcttattcaaaaa 41
>RF01058;MIR806;AAAA02018035.1/11858-12101 39946:Oryza sativa Indica
Group
Length = 244
Score = 218 bits (110), Expect = 3e-56
Identities = 216/245 (88%), Gaps = 6/245 (2%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| ||||| |||||||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 1 atactacctccattttttaatagatgacgccgttgactttttctcacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
| ||||||| ||||| |||| ||||||||||||||||| |||||||||||||||| |||
Sbjct: 61 catcttatttaaaaaatttacgtaattataatttattttgttatgagttgttttattact 120
Query: 129 catagtacttta-agtgtgatttatat--tttat-aaatt-tgcataaaatttttgaata 183
||||||| |||| |||||||||||||| || || | ||| |||| |||| ||||||||
Sbjct: 121 catagtattttacagtgtgatttatatccttgatcatattctgcagaaaaaatttgaata 180
Query: 184 agacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggaggg 243
||| |||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||
Sbjct: 181 aga-gaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaactgagga 239
Query: 244 agtat 248
|||||
Sbjct: 240 agtat 244
Score = 103 bits (52), Expect = 1e-21
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||| ||||||| |||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 80 taaattttttaaataagatgaatggtcaaacatgtgagaaaaagtcaacggcgtcatcta 21
Query: 229 ttaaaaaacggagggagtat 248
|||||||| ||||| |||||
Sbjct: 20 ttaaaaaatggaggtagtat 1
Score = 81.8 bits (41), Expect = 4e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||| ||||||||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 244 atacttcctcagttttttaatagatgacgccgttgactttttctcacatgtttgaccatt 185
Query: 69 cgtcttattcaaa 81
| |||||||||||
Sbjct: 184 c-tcttattcaaa 173
>RF01062;MIR812;AAAA02027047.1/1969-2142 39946:Oryza sativa Indica
Group
Length = 174
Score = 216 bits (109), Expect = 1e-55
Identities = 139/149 (93%)
Strand = Plus / Minus
Query: 56 atgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgag 115
||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||||||
Sbjct: 158 atgtttgacccttcgtcttattcaaaaaatttacgtaattataatttattttgttatgag 99
Query: 116 ttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaatt 175
||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 98 ttgttttatcattcatagtactttaagtgtgatttatatcttatacatttgcataaaatt 39
Query: 176 tttgaataagacgaatggtcaaacatgta 204
||||||||||||||||||||||| |||||
Sbjct: 38 tttgaataagacgaatggtcaaatatgta 10
Score = 63.9 bits (32), Expect = 1e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaa 216
|||| ||||||||||||||||| |||||||||| | ||||||||||||
Sbjct: 126 taaattttttgaataagacgaagggtcaaacatttgagaaaaagtcaa 173
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 53 tacatgtttgacaattcgtcttattcaaaaa 83
||||| |||||| ||||||||||||||||||
Sbjct: 10 tacatatttgaccattcgtcttattcaaaaa 40
>RF01062;MIR812;AC150654.2/134436-134607 39947:Oryza sativa Japonica
Group
Length = 172
Score = 216 bits (109), Expect = 1e-55
Identities = 145/157 (92%)
Strand = Plus / Minus
Query: 61 tgacaattcgtcttattcaaaaacattacataattataatttattttattatgagttgtt 120
|||| |||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||
Sbjct: 157 tgaccattcgtcttatttaaaaaatttacgtaattataatttattttgttatgagttgtt 98
Query: 121 ttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaatttttga 180
|||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 97 ttatcacttatattactttaagtgtgatttatatcttatatatttgcataaaatttttga 38
Query: 181 ataagacgaatggtcaaacatgtaagaaaaagtcaac 217
|||||||||||||||||| |||| |||||||||||||
Sbjct: 37 ataagacgaatggtcaaatatgtgagaaaaagtcaac 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 40 gttgattttttcgtacatgtttgacaattcgtcttattcaaaaa 83
||||| |||||| |||| |||||| ||||||||||||||||||
Sbjct: 1 gttgactttttctcacatatttgaccattcgtcttattcaaaaa 44
>RF01058;MIR806;CR855151.1/21618-21856 4530:Oryza sativa (rice)
Length = 239
Score = 216 bits (109), Expect = 1e-55
Identities = 209/240 (87%), Gaps = 3/240 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||||||||||||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 1 atactacctccgttttttaatagatgacgccgttgactttttctcacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacatta-cataattataatttattttattatgagttgttttatcac 127
||||||||| ||| | | ||||||||||||||||| |||||||||| |||
Sbjct: 61 cgtcttattttcc--catgaacgtaattataatttattttgttatgagttgctttgggga 118
Query: 128 tcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagac 187
||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
Sbjct: 119 ggggagtactttaagtgtgatttatatcttatacatttgcataaaatttttgaataaggc 178
Query: 188 gaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 179 gaatggtcaaacatgcgagaaaaagtcaacggcgtcatctattaaaaaacggagggagta 238
Score = 113 bits (57), Expect = 1e-24
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 180 aataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacgg 239
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 69 aataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacgg 10
Query: 240 agggagtat 248
||| |||||
Sbjct: 9 aggtagtat 1
Score = 99.6 bits (50), Expect = 2e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||
Sbjct: 238 tactccctccgttttttaatagatgacgccgttgactttttctcgcatgtttgaccattc 179
Query: 70 gtcttattcaaaaa 83
| ||||||||||||
Sbjct: 178 gccttattcaaaaa 165
>RF01062;MIR812;AL606626.3/21842-21668 39947:Oryza sativa Japonica
Group
Length = 175
Score = 212 bits (107), Expect = 2e-54
Identities = 141/151 (93%), Gaps = 1/151 (0%)
Strand = Plus / Minus
Query: 62 gacaattcgtcttattcaaaaacatt-acataattataatttattttattatgagttgtt 120
|||||||||||||||||||||| ||| || ||||||||||||||||| |||| |||||||
Sbjct: 154 gacaattcgtcttattcaaaaaaatttacttaattataatttattttgttataagttgtt 95
Query: 121 ttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaatttttga 180
|||||||||||||||||||||||||||||||||| ||||| |||| ||||||| ||||||
Sbjct: 94 ttatcactcatagtactttaagtgtgatttatatcttatacatttacataaaaattttga 35
Query: 181 ataagacgaatggtcaaacatgtaagaaaaa 211
||||||||||||||||||||||| |||||||
Sbjct: 34 ataagacgaatggtcaaacatgtgagaaaaa 4
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 43 gattttttcgtacatgtttgacaattcgtcttattcaaaa 82
||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1 gattttttctcacatgtttgaccattcgtcttattcaaaa 40
>RF01062;MIR812;AAAA02017978.1/20430-20597 39946:Oryza sativa Indica
Group
Length = 168
Score = 208 bits (105), Expect = 3e-53
Identities = 138/149 (92%)
Strand = Plus / Minus
Query: 66 attcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatc 125
|||||| ||||||||||| |||| |||| |||||||||||| |||||||| ||||||||
Sbjct: 149 attcgttttattcaaaaaatttacgtaatgataatttattttgttatgagtggttttatc 90
Query: 126 actcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataag 185
||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||
Sbjct: 89 actcatagtactttaagtgtgatttatatcttatacatttgcataaaaattttgaataag 30
Query: 186 acgaatggtcaaacatgtaagaaaaagtc 214
|||||||||||||||||| ||||||||||
Sbjct: 29 acgaatggtcaaacatgtgagaaaaagtc 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaa 82
||||||||||| |||||||||||||||||
Sbjct: 12 acatgtttgaccattcgtcttattcaaaa 40
>RF01058;MIR806;AP008210.1/18334261-18334013 39947:Oryza sativa
Japonica Group
Length = 249
Score = 208 bits (105), Expect = 3e-53
Identities = 210/236 (88%), Gaps = 8/236 (3%)
Strand = Plus / Plus
Query: 21 ttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaa 80
||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||||
Sbjct: 14 tttttaaatagatgacgccgttgactttttctcacatgtttgaccattcgtcttattcaa 73
Query: 81 aaacattacataattataatttattttattatgag-ttgttttatcactcat-agtactt 138
||| |||| ||||||||||||||||| ||| ||| ||||||||||| |||| |||||||
Sbjct: 74 aaaatttacgtaattataatttattttgttacgagattgttttatcattcataagtactt 133
Query: 139 taagtgtgattt-atattttataaattt-gcata--aaatttttgaataa-gacg-aatg 192
|| ||||||||| |||| ||||| |||| ||||| || ||||||||||| |||| ||||
Sbjct: 134 taggtgtgatttaatatcttatacatttagcataacaattttttgaataacgacgcaatg 193
Query: 193 gtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 194 gtcaaacatgtgataaaaagtcaacggcgtcatctattaaaaaacggagggagtat 249
Score = 103 bits (52), Expect = 1e-21
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 81 taaattttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatcta 22
Query: 229 ttaaaaaa 236
|| |||||
Sbjct: 21 tttaaaaa 14
Score = 81.8 bits (41), Expect = 4e-15
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||
Sbjct: 249 atactccctccgttttttaatagatgacgccgttgactttttatcacatgtttgaccatt 190
Query: 69 -cgtc-ttattcaaaaa 83
|||| |||||||||||
Sbjct: 189 gcgtcgttattcaaaaa 173
>RF01058;MIR806;AP003315.1/81972-82202 39947:Oryza sativa Japonica
Group
Length = 231
Score = 208 bits (105), Expect = 3e-53
Identities = 209/242 (86%), Gaps = 15/242 (6%)
Strand = Plus / Plus
Query: 9 atactccctccgtttttt-aatagatgacgccgttgattttttcgt--acatgtttgaca 65
|||||| ||||||||||| |||||||||| ||||||| ||||| | |||||||||||
Sbjct: 1 atactctctccgtttttttaatagatgacaccgttgactttttttttcacatgtttgact 60
Query: 66 attcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatc 125
|||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 attcgtcttattcaaaaaatttacataattataatttattttatcatgagttgttttatc 120
Query: 126 actcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataag 185
| |||||||| ||||||||||||||| ||| | || ||||||||||||
Sbjct: 121 aatcatagtattttaagtgtgattta-attacgt-----------aattttttgaataag 168
Query: 186 acgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggag 245
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 169 acgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacggaggtag 228
Query: 246 ta 247
||
Sbjct: 229 ta 230
Score = 109 bits (55), Expect = 2e-23
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||
Sbjct: 230 tactacctccgttttttaatagatgacgccgttgactttttctcacatgtttgaccattc 171
Query: 70 gtcttattcaaaaacattacataatta 96
|||||||||||||| ||||| ||||||
Sbjct: 170 gtcttattcaaaaa-attacgtaatta 145
Score = 95.6 bits (48), Expect = 3e-19
Identities = 76/83 (91%), Gaps = 3/83 (3%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgt--aagaaaaagtcaacggtgtcatc 226
|||| |||||||||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct: 83 taaattttttgaataagacgaatagtcaaacatgtgaaaaaaaaagtcaacggtgtcatc 24
Query: 227 tattaa-aaaacggagggagtat 248
|||||| ||||||||| ||||||
Sbjct: 23 tattaaaaaaacggagagagtat 1
>RF01062;MIR812;AAAA02033107.1/132-301 39946:Oryza sativa Indica
Group
Length = 170
Score = 202 bits (102), Expect = 2e-51
Identities = 138/150 (92%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||| ||||||| ||||| |||| |||||||||||||||||||||||
Sbjct: 159 acatgtttgaccattcatcttattaaaaaaatttacgtaattataatttattttattatg 100
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || |||
Sbjct: 99 agttgttttatcactcatagtactttaagtgtgatttatatcttatacatttgtatgaaa 40
Query: 174 tttttgaataagacgaatggtcaaacatgt 203
||||||||||| |||||||| |||||||||
Sbjct: 39 tttttgaataaaacgaatggccaaacatgt 10
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgt 203
|||| ||||| ||||||| ||||||||||||||||
Sbjct: 125 taaatttttttaataagatgaatggtcaaacatgt 159
>RF01062;MIR812;AAAA02025032.1/7173-7001 39946:Oryza sativa Indica
Group
Length = 173
Score = 202 bits (102), Expect = 2e-51
Identities = 148/162 (91%), Gaps = 1/162 (0%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||||||||||||||||| |||| |||||||||||||||| |||||
Sbjct: 162 acatgtttgaccattcgtcttattcaaaaaatttacgcaattataatttattttgttatg 103
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 102 agttgttttatcacttatagtactttaagtgtgatttatatcttatacatttgtataaaa 43
Query: 174 t-ttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
| ||||||||||||||||| |||||||||| ||||||||||
Sbjct: 42 ttttttgaataagacgaataatcaaacatgtgagaaaaagtc 1
Score = 77.8 bits (39), Expect = 7e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 164 ttgcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| |||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 123 ttgcgtaaattttttgaataagacgaatggtcaaacatgtgagaaaaagtc 173
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
|||||||||| ||||||||||||||||||
Sbjct: 12 acatgtttgattattcgtcttattcaaaaa 41
>RF01062;MIR812;AACV01030196.1/359-188 39947:Oryza sativa Japonica
Group
Length = 172
Score = 200 bits (101), Expect = 7e-51
Identities = 143/157 (91%)
Strand = Plus / Minus
Query: 57 tgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagt 116
||||| || |||| ||||||||| ||| |||||||||||||||||||||| ||||||||
Sbjct: 158 tgttttaccattcatcttattcacaaattttacataattataatttattttgttatgagt 99
Query: 117 tgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaattt 176
|||||||||||||||||||||||||| |||||||||| ||||| || ||||||||||||
Sbjct: 98 tgttttatcactcatagtactttaagcatgatttatatcttatacatctgcataaaattt 39
Query: 177 ttgaataagacgaatggtcaaacatgtaagaaaaagt 213
|||||||||||||||||| |||||||| |||||||||
Sbjct: 38 ttgaataagacgaatggtaaaacatgtgagaaaaagt 2
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
|||||||| || ||||||||||||||||||
Sbjct: 12 acatgttttaccattcgtcttattcaaaaa 41
>RF01062;MIR812;EF990854.1/517-349 4530:Oryza sativa (rice)
Length = 169
Score = 200 bits (101), Expect = 7e-51
Identities = 134/145 (92%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||| | ||||||||||||||||||| ||| ||||||||||||||||| |||||
Sbjct: 158 acatgtttggccattcgtcttattcaaaaactttatgtaattataatttattttgttatg 99
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
|||||||||||||||||||||||||||| |||||||||||| ||||| ||||| ||||||
Sbjct: 98 agttgttttatcactcatagtactttaattgtgatttatatcttatacatttgtataaaa 39
Query: 174 tttttgaataagacgaatggtcaaa 198
||||| |||||||||||||||||||
Sbjct: 38 tttttaaataagacgaatggtcaaa 14
Score = 71.9 bits (36), Expect = 4e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||| |||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 122 cataaagtttttgaataagacgaatggccaaacatgtgagaaaaagtc 169
>RF01062;MIR812;AAAA02005635.1/37148-37317 39946:Oryza sativa Indica
Group
Length = 170
Score = 200 bits (101), Expect = 7e-51
Identities = 148/161 (91%), Gaps = 2/161 (1%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| ||||||||||||||||| ||| |||||||||||||||| |||||
Sbjct: 159 acatgtttgaccattcgtcttattcaaaatatttatgtaattataatttatttg-ttatg 101
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
||| |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||
Sbjct: 100 agt-gttttatcactcatagtactttaagtatgatttatatcttatacatttgcataaaa 42
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 41 tttttgaataagacgaatggtcaaacatgtgagaaaaagtc 1
Score = 71.9 bits (36), Expect = 4e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 175 ttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 131 ttttgaataagacgaatggtcaaacatgtgagaaaaagtc 170
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
||||||||||| ||||||||||||||||||
Sbjct: 12 acatgtttgaccattcgtcttattcaaaaa 41
>RF01062;MIR812;AP003510.3/118289-118459 39947:Oryza sativa Japonica
Group
Length = 171
Score = 198 bits (100), Expect = 3e-50
Identities = 137/148 (92%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||||||||||| ||||| |||||||||||||||||||||| |||||
Sbjct: 160 acatgtttgaccattcgtcttatttaaaaaatttacataattataatttattttgttatg 101
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
|||||||| || |||||||||||||||||||||||||||| | |||| ||||||||||||
Sbjct: 100 agttgtttaattactcatagtactttaagtgtgatttata-tctatatatttgcataaaa 42
Query: 174 tttttgaataagacgaatggtcaaacat 201
||||||||||||||||||| ||||||||
Sbjct: 41 tttttgaataagacgaatgatcaaacat 14
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| ||||| |||||||||||||||||||||||| | ||||||||
Sbjct: 126 taaattttttaaataagacgaatggtcaaacatgtgaaaaaaagtc 171
>RF01058;MIR806;AAAA02024001.1/6045-5803 39946:Oryza sativa Indica
Group
Length = 243
Score = 198 bits (100), Expect = 3e-50
Identities = 209/243 (86%), Gaps = 3/243 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||||||| |||||||||||||||||||||| |||||| ||||||||||| |||
Sbjct: 1 atactccctccgtcttttaatagatgacgccgttgactttttctcacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgtttt--atca 126
|||| | ||| ||| | ||||| ||| | || |||||| ||||||| ||||
Sbjct: 61 cgtcgttttcgttgtgtttatgtgattattattattgttgttatgaattgttttgtatca 120
Query: 127 ctcatagtactttaagtgtgatttatatt-ttataaatttgcataaaatttttgaataag 185
|||||||||||||||| |||||||||| | ||||| |||||||||||||||||||||| |
Sbjct: 121 ctcatagtactttaagcgtgatttataatcttatacatttgcataaaatttttgaatagg 180
Query: 186 acgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggag 245
|||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 181 acgaatggtcaaacatgtgagaaaaagtcaacggcatcatctattaaaagacggagggag 240
Query: 246 tat 248
|||
Sbjct: 241 tat 243
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 185 gacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggaggga 244
||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||
Sbjct: 64 gacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaagacggaggga 5
Query: 245 gtat 248
||||
Sbjct: 4 gtat 1
Score = 93.7 bits (47), Expect = 1e-18
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||||||| ||||||||||||| |||||||| |||||| ||||||||||| |||
Sbjct: 243 atactccctccgtcttttaatagatgatgccgttgactttttctcacatgtttgaccatt 184
Query: 69 cgtcttattcaaaaa 83
|||| ||||||||||
Sbjct: 183 cgtcctattcaaaaa 169
>RF01062;MIR812;AACV01015527.1/446-277 39947:Oryza sativa Japonica
Group
Length = 170
Score = 196 bits (99), Expect = 1e-49
Identities = 146/161 (90%), Gaps = 2/161 (1%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
|||||||| || |||||||||||| ||||| ||| ||||||||||| || ||| |||||
Sbjct: 159 acatgttttaccattcgtcttattaaaaaa--ttatataattataatntagtttgttatg 102
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
| ||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||
Sbjct: 101 aattgttttatcactcatagtactttaagtgtgatttatatcttatacatttacataaaa 42
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 41 tttttgaataagacgaatggtcaaacatgggagaaaaagtc 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 55 catgtttgacaattcgtcttattcaaaaa 83
|||||||||| ||||||||||||||||||
Sbjct: 13 catgtttgaccattcgtcttattcaaaaa 41
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 172 aatttttgaataagacgaatggtcaaacatgt 203
||||||| ||||||||||||||| ||||||||
Sbjct: 128 aattttttaataagacgaatggtaaaacatgt 159
>RF01062;MIR812;AACV01011339.1/23659-23487 39947:Oryza sativa
Japonica Group
Length = 173
Score = 196 bits (99), Expect = 1e-49
Identities = 136/147 (92%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 68 tcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcac 127
|||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 148 tcgtcttattcaaaaaatttacataattataattaattttgttatgagttgttttatcac 89
Query: 128 tcatagtactttaagtgtgatttatat-tttataaatttgcataaaatttttgaataaga 186
||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||
Sbjct: 88 tcatagtactttaagtgtgatttatatcattatacattcgcataaaatttttgaataaga 29
Query: 187 cgaatggtcaaacatgtaagaaaaagt 213
| ||| ||||||||||| |||||||||
Sbjct: 28 caaatagtcaaacatgtgagaaaaagt 2
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| |||||||||||||||| | |||||||||| ||||||||||
Sbjct: 128 taaattttttgaataagacgagagatcaaacatgtgagaaaaagtc 173
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
||||||||||| ||| ||||||||||||||
Sbjct: 12 acatgtttgactatttgtcttattcaaaaa 41
>RF01062;MIR812;AAAA02028602.1/18143-17970 39946:Oryza sativa Indica
Group
Length = 174
Score = 194 bits (98), Expect = 4e-49
Identities = 146/161 (90%), Gaps = 2/161 (1%)
Strand = Plus / Minus
Query: 56 atgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgag 115
||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 161 atgtttgaccattcgtcttattcaaaaaatttacataattataatttattttgttatgag 102
Query: 116 ttgttttatcactcatagtactttaagtgtgatttatattttataaatttgc--ataaaa 173
||||||||||||||| | ||||||||||||||||||||| ||||| |||||| | ||||
Sbjct: 101 ttgttttatcactcacaatactttaagtgtgatttatatcttatacatttgcaaaaaaaa 42
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||||||||||||||||||||||| | ||||||||||
Sbjct: 41 aatttgaataagacgaatggtcaaacatatgagaaaaagtc 1
Score = 67.9 bits (34), Expect = 7e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| |||||||||||||||||||||||||||| | ||||||||||
Sbjct: 129 taaattttttgaataagacgaatggtcaaacatatgagaaaaagtc 174
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 56 atgtttgacaattcgtcttattcaaa 81
||||||||| ||||||||||||||||
Sbjct: 14 atgtttgaccattcgtcttattcaaa 39
>RF01058;MIR806;AAAA02020138.1/22175-21915 39946:Oryza sativa Indica
Group
Length = 261
Score = 194 bits (98), Expect = 4e-49
Identities = 218/260 (83%), Gaps = 21/260 (8%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
||||||| |||||||||||||| |||||||||||| |||||| |||| |||||| ||||
Sbjct: 2 tactcccaccgttttttaatagttgacgccgttgactttttctcacatatttgaccattc 61
Query: 70 gtcttattcaaaaacatt-acataattataatttattttattatgagttgttttatcact 128
||||||||||||| ||| | |||||||||||||||||||||||||||| |||| ||||
Sbjct: 62 atcttattcaaaaaaatttatgtaattataatttattttattatgagttgctttaccact 121
Query: 129 catagtactttaagtgtgatttat-------------------attttataaatttgcat 169
|||| || |||||||||||||||| |||||||| ||||||||
Sbjct: 122 cataatattttaagtgtgatttatatcttatacatttgcataaattttatacatttgcat 181
Query: 170 aaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctat 229
||| |||||||||||||||||||||||||||||| |||||||||||| || |||||||||
Sbjct: 182 aaattttttgaataagacgaatggtcaaacatgtgagaaaaagtcaaaggcgtcatctat 241
Query: 230 t-aaaaaacggagggagtat 248
| |||||||||||| |||||
Sbjct: 242 taaaaaaacggaggtagtat 261
Score = 99.6 bits (50), Expect = 2e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
||||||||||||| ||||||||||| |||| ||||||||||||||| |||| ||||||||
Sbjct: 75 tttttgaataagatgaatggtcaaatatgtgagaaaaagtcaacggcgtcaactattaaa 16
Query: 234 aaacggagggagta 247
|||||| |||||||
Sbjct: 15 aaacggtgggagta 2
Score = 87.7 bits (44), Expect = 7e-17
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 9 atactccctccgtttttt-aatagatgacgccgttgattttttcgtacatgtttgacaat 67
||||| |||||||||||| ||||||||||||| |||| |||||| ||||||||||| ||
Sbjct: 261 atactacctccgtttttttaatagatgacgcctttgactttttctcacatgtttgaccat 202
Query: 68 tcgtcttattcaaaaa 83
||||||||||||||||
Sbjct: 201 tcgtcttattcaaaaa 186
>RF01058;MIR806;AAAA02007404.1/34047-34285 39946:Oryza sativa Indica
Group
Length = 239
Score = 194 bits (98), Expect = 4e-49
Identities = 207/241 (85%), Gaps = 3/241 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaa-tagatgacgccgttgattttttcgtacatgtttgacaat 67
||||| || ||||||||||| ||||||||| |||||| ||||| ||| ||||||| ||
Sbjct: 1 atactacccccgttttttaaatagatgacgtcgttgactttttgtcacacgtttgaccat 60
Query: 68 tcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcac 127
| || ||||||||||| ||| ||||||||||||||||| || ||||||||||| |||
Sbjct: 61 ttgttttattcaaaaaatttatgtaattataatttattttgtt--gagttgttttaacac 118
Query: 128 tcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagac 187
||| ||||||||||| ||||||||| ||||| ||||||||||||||||||||||| |
Sbjct: 119 tcaaagtactttaagcatgatttataccttatacatttgcataaaatttttgaataaaat 178
Query: 188 gaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 179 aaatggtcaaacatgtgttcaaaagtcaacggtggcatctattaaaaaacggagggagta 238
Query: 248 t 248
|
Sbjct: 239 t 239
Score = 69.9 bits (35), Expect = 2e-11
Identities = 72/83 (86%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatc 226
|||||| ||||||||||| || ||||||||||| ||| | |||||||||||| ||||||
Sbjct: 83 cataaattttttgaataaaacaaatggtcaaacgtgtgacaaaaagtcaacgacgtcatc 24
Query: 227 ta-ttaaaaaacggagggagtat 248
|| ||||||||||| || |||||
Sbjct: 23 tatttaaaaaacgggggtagtat 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||||||||||||| | ||||||| |||| ||||||||||| |||
Sbjct: 239 atactccctccgttttttaatagatgccaccgttgacttttgaacacatgtttgaccatt 180
Query: 69 cgtcttattcaaaaa 83
| |||||||||||
Sbjct: 179 tattttattcaaaaa 165
>RF01062;MIR812;AAAA02036366.1/6810-6639 39946:Oryza sativa Indica
Group
Length = 172
Score = 192 bits (97), Expect = 2e-48
Identities = 133/145 (91%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||||||||||| ||||| |||| ||||||||| ||||||| |||||
Sbjct: 161 acatgtttgaccattcgtcttatttaaaaaatttacgtaattataacttattttgttatg 102
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
||||||||||||| | ||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 101 agttgttttatcatttatagtactttaagtgtgatttatatcttatatatttgcataaaa 42
Query: 174 tttttgaataagacgaatggtcaaa 198
||||| |||||||||||||||||||
Sbjct: 41 ttttttaataagacgaatggtcaaa 17
Score = 67.9 bits (34), Expect = 7e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| ||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 127 taaattttttaaataagacgaatggtcaaacatgtgagaaaaagtc 172
>RF01062;MIR812;AP008207.1/34522472-34522302 39947:Oryza sativa
Japonica Group
Length = 171
Score = 192 bits (97), Expect = 2e-48
Identities = 146/161 (90%), Gaps = 1/161 (0%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
|||| |||||| |||||||||||||||||| |||| ||||||||||||||||| ||||
Sbjct: 160 acatatttgaccattcgtcttattcaaaaaatttacgtaattataatttattttgttata 101
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
| |||||||||||||||||||| |||||||||||||||||| || || ||||||||||||
Sbjct: 100 atttgttttatcactcatagtattttaagtgtgatttatatcttttacatttgcataaaa 41
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||||||| |||||||||||||||||| ||||||||||
Sbjct: 40 -ttttgaataatacgaatggtcaaacatgtgagaaaaagtc 1
Score = 58.0 bits (29), Expect = 6e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagt 213
|||| ||||||||||||||||||||||||| |||| | |||||||
Sbjct: 126 taaattttttgaataagacgaatggtcaaatatgtgaaaaaaagt 170
>RF01058;MIR806;AC137993.2/80593-80353 39947:Oryza sativa Japonica
Group
Length = 241
Score = 192 bits (97), Expect = 2e-48
Identities = 197/229 (86%), Gaps = 1/229 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||| |||| |||||||||||||||||||||||||| | ||||||| |||
Sbjct: 1 atactacctcagtttgttaatagatgacgccgttgattttttatcatgcgtttgactatt 60
Query: 69 cgtcttattcaaaaacatt-acataattataatttattttattatgagttgttttatcac 127
||||||||||||||| ||| | ||||||||||||||| | || ||||||||||||||||
Sbjct: 61 cgtcttattcaaaaaaatttatgtaattataatttattatgttgtgagttgttttatcac 120
Query: 128 tcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagac 187
||| |||| |||||| ||||| |||| ||||| ||||| ||||||||||||||||||||
Sbjct: 121 tcaaagtattttaagcatgattcatatcttatacatttgtataaaatttttgaataagac 180
Query: 188 gaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaa 236
||||||||| |||| | |||||||||||| ||||||||||||||||
Sbjct: 181 gaatggtcagacatatgtttaaaagtcaacggcgtcatctattaaaaaa 229
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
|||||||||||||||||| ||||||| | | ||||| ||||||| ||||||||||||
Sbjct: 75 tttttgaataagacgaatagtcaaacgcatgataaaaaatcaacggcgtcatctattaac 16
Query: 234 aaacggagggagtat 248
|||| |||| |||||
Sbjct: 15 aaactgaggtagtat 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 21 ttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaa 80
|||||||||||||||||||||||| |||| | |||| |||| |||||||||||||||
Sbjct: 229 ttttttaatagatgacgccgttgacttttaaacatatgtctgaccattcgtcttattcaa 170
Query: 81 aaa 83
|||
Sbjct: 169 aaa 167
>RF01062;MIR812;AAAA02019771.1/14194-14365 39946:Oryza sativa Indica
Group
Length = 172
Score = 190 bits (96), Expect = 7e-48
Identities = 156/174 (89%), Gaps = 4/174 (2%)
Strand = Plus / Minus
Query: 43 gattttttcgtacatgtttgacaattcgtcttattcaaaaaca--ttacataattataat 100
||||||||| ||||||||||| ||| |||||||||||||| | |||| ||||||| |
Sbjct: 172 gattttttctcacatgtttgactatttgtcttattcaaaaaaaaattacgtaattat--t 115
Query: 101 ttattttattatgagttgttttatcactcatagtactttaagtgtgatttatattttata 160
|| |||| |||||||||||||||||||||||| || |||||||||||||||||| |||||
Sbjct: 114 tttttttgttatgagttgttttatcactcataatattttaagtgtgatttatatcttata 55
Query: 161 aatttgcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 54 catttgcataaaatttttgaataagacgaatgatcaaacatgtgagaaaaagtc 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaa 211
|||||||||||||| ||| ||||||||||| |||||||
Sbjct: 132 tttttgaataagacaaatagtcaaacatgtgagaaaaa 169
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
|||||||||| ||||||||||||||||||
Sbjct: 12 acatgtttgatcattcgtcttattcaaaaa 41
>RF01062;MIR812;AACV01009563.1/1042-1218 39947:Oryza sativa Japonica
Group
Length = 177
Score = 190 bits (96), Expect = 7e-48
Identities = 147/163 (90%), Gaps = 2/163 (1%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
|||||||| || |||||||||||| ||||| ||| |||||||||||||||||| |||||
Sbjct: 163 acatgttttaccattcgtcttatttaaaaaatttaaataattataatttattttgttatg 104
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgc--ataa 171
||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | ||
Sbjct: 103 agttgttttatcactcatagtactttaagtgtgatttatatcttatatatttgcaaaaaa 44
Query: 172 aatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 43 aaaaattgaataagacgaatggtcaaacatgtgagaaaaagtc 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaa 208
|||| ||||| ||||||||||||||| |||||||| ||||
Sbjct: 129 taaattttttaaataagacgaatggtaaaacatgtgagaa 168
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaa 80
||||||||||| |||||||||||||||
Sbjct: 12 acatgtttgaccattcgtcttattcaa 38
>RF01062;MIR812;AACV01015235.1/48700-48871 39947:Oryza sativa
Japonica Group
Length = 172
Score = 188 bits (95), Expect = 3e-47
Identities = 134/147 (91%)
Strand = Plus / Minus
Query: 57 tgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagt 116
|||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||| ||
Sbjct: 158 tgtttgaccattcgtcttattcaaaaaatttacgtaattataatttattttgttatgggt 99
Query: 117 tgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaattt 176
|||||||||||| |||||||||||| |||||||||||| ||||| ||| |||||||||||
Sbjct: 98 tgttttatcacttatagtactttaattgtgatttatatcttatacattagcataaaattt 39
Query: 177 ttgaataagacgaatggtcaaacatgt 203
|||||||||||||| || |||||||||
Sbjct: 38 ttgaataagacgaacgggcaaacatgt 12
Score = 67.9 bits (34), Expect = 7e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| ||||||||||||||||||||||||||| || ||||||||||
Sbjct: 127 taaattttttgaataagacgaatggtcaaacaagtgagaaaaagtc 172
>RF01062;MIR812;AAAA02001623.1/2026-2197 39946:Oryza sativa Indica
Group
Length = 172
Score = 186 bits (94), Expect = 1e-46
Identities = 147/162 (90%), Gaps = 2/162 (1%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattat-aatttattttattat 112
||||||||||| |||||||||||||||||| |||| |||| || |||||||||| ||||
Sbjct: 161 acatgtttgactattcgtcttattcaaaaaatttacgtaatcatcaatttattttgttat 102
Query: 113 gagttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaa 172
|||||||||||||||| |||||||||||||||||||||||| | |||| ||| |||||||
Sbjct: 101 gagttgttttatcactaatagtactttaagtgtgatttata-tctatatattcgcataaa 43
Query: 173 atttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||||||||| ||||||| ||||||||||| ||||||||||
Sbjct: 42 atttttgaatatgacgaatagtcaaacatgtgagaaaaagtc 1
Score = 67.9 bits (34), Expect = 7e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| |||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 127 taaattttttgaataagacgaatagtcaaacatgtgagaaaaagtc 172
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
||||||||||| ||||||| ||||||||||
Sbjct: 12 acatgtttgactattcgtcatattcaaaaa 41
>RF01062;MIR812;AP003237.2/107889-108059 39947:Oryza sativa Japonica
Group
Length = 171
Score = 186 bits (94), Expect = 1e-46
Identities = 143/158 (90%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 53 tacatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattat 112
|||||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||
Sbjct: 161 tacatgtttgaccattcgtcttattcaaaaaatttacgtaattataatttattttgttat 102
Query: 113 gagttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaa 172
||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||
Sbjct: 101 gagttattttatcactcatagtactttaagtgtgatttatatcttatacatttgca-aaa 43
Query: 173 atttttgaataagacgaatggtcaaacatgtaagaaaa 210
| || ||||||||||||||| |||||||| ||||||
Sbjct: 42 aaaattaaataagacgaatggttaaacatgtgagaaaa 5
Score = 65.9 bits (33), Expect = 3e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaa 205
|||| ||||||||||||||||||||||||||||||||
Sbjct: 126 taaattttttgaataagacgaatggtcaaacatgtaa 162
>RF01062;MIR812;AC134045.2/54140-54311 39947:Oryza sativa Japonica
Group
Length = 172
Score = 186 bits (94), Expect = 1e-46
Identities = 142/158 (89%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| ||||||||||||| |||| |||| ||||| ||||||||||| ||||
Sbjct: 161 acatgtttgaccattcgtcttattccaaaaatttacgtaattgtaatttattttgatatg 102
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | ||||
Sbjct: 101 agttgttttatcactcatagtactttaagtgtgatttatatcttatatatttgtaaaaaa 42
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaa 211
|||||||||||||||||||||| ||||||||||||
Sbjct: 41 aaattgaataagacgaatggtcaaatatgtaagaaaaa 4
Score = 67.9 bits (34), Expect = 7e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| |||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 127 taaatttttggaataagacgaatggtcaaacatgtgagaaaaagtc 172
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 44 attttttcgtacatgtttgacaattcgtcttattcaa 80
|||||||| ||||| |||||| |||||||||||||||
Sbjct: 2 attttttcttacatatttgaccattcgtcttattcaa 38
>RF01062;MIR812;AP005160.3/188274-188102 39947:Oryza sativa Japonica
Group
Length = 173
Score = 182 bits (92), Expect = 2e-45
Identities = 147/163 (90%), Gaps = 3/163 (1%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacat--aattataatttattttatta 111
|||||||| || |||||||||||||||||| | | || |||||||||| |||||||||
Sbjct: 162 acatgtttaaccattcgtcttattcaaaaaaaaaatatgtaattataatt-attttatta 104
Query: 112 tgagttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataa 171
|||||| |||||||| | ||||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 103 tgagttcttttatcatttatagtactttaagtgtgatttatatcttatacatttgtataa 44
Query: 172 aatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 43 aatttttgaataagacgaatggtcaaacatgtgagaaaaagtc 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 133 tttttgaataagacgaatggttaaacatgtgagaaaaagtc 173
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
||||||||||| ||||||||||||||||||
Sbjct: 12 acatgtttgaccattcgtcttattcaaaaa 41
>RF01062;MIR812;AAAA02013958.1/8542-8372 39946:Oryza sativa Indica
Group
Length = 171
Score = 180 bits (91), Expect = 6e-45
Identities = 137/151 (90%), Gaps = 1/151 (0%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataat-ttattttattat 112
||||||| ||| |||||||||||||| | | ||| |||||||||| ||||||| ||||
Sbjct: 160 acatgttggaccattcgtcttattcacacaatctacgtaattataatgttattttgttat 101
Query: 113 gagttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaa 172
||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 100 gagttgttttatcactcatagtactttaagtgtaatttatatcttatatatttgcataaa 41
Query: 173 atttttgaataagacgaatggtcaaacatgt 203
|||||||||||||||||||| ||||||||||
Sbjct: 40 atttttgaataagacgaatgatcaaacatgt 10
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 178 tgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||||||||||||||| ||||||| ||||||||||
Sbjct: 135 tgaataagacgaatggtccaacatgtgagaaaaagtc 171
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
|||||||||| ||||||||||||||||||
Sbjct: 10 acatgtttgatcattcgtcttattcaaaaa 39
>RF01062;MIR812;AAAA02007341.1/15118-14948 39946:Oryza sativa Indica
Group
Length = 171
Score = 180 bits (91), Expect = 6e-45
Identities = 149/167 (89%), Gaps = 1/167 (0%)
Strand = Plus / Minus
Query: 46 tttttcgtacatgtttgacaattcgtcttattcaaaaacattacataattataatttatt 105
|||||| || || |||||| ||| |||||||| ||||| ||||| |||||||||||||||
Sbjct: 168 tttttcttatatatttgaccatttgtcttattaaaaaa-attacgtaattataatttatt 110
Query: 106 ttattatgagttgttttatcactcatagtactttaagtgtgatttatattttataaattt 165
|| |||||||||||||||||||| ||||| | ||||||||||||||||| ||||| ||||
Sbjct: 109 ttgttatgagttgttttatcacttatagtgcattaagtgtgatttatatcttatatattt 50
Query: 166 gcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaag 212
||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 49 acataaaatttttgaataagacgaattatcaaacatgtgagaaaaag 3
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
|||||||||| |||||||||||||||||||
Sbjct: 12 acatgtttgataattcgtcttattcaaaaa 41
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||| |||||||| |||||||||| || ||||||||||||
Sbjct: 131 ttttttaataagacaaatggtcaaatatataagaaaaagtc 171
>RF01062;MIR812;AAAA02010584.1/1979-1809 39946:Oryza sativa Indica
Group
Length = 171
Score = 178 bits (90), Expect = 3e-44
Identities = 142/158 (89%), Gaps = 1/158 (0%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||||||||||||||||| ||| ||||||||||||||||||| |||
Sbjct: 160 acatgtttgaccattcgtcttattcaaaaaatttatgtaattataatttattttatcatg 101
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
|||||| | |||||| ||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 100 agttgtatgatcacttatagtactttaagtgtgatttatatcttatatatttgcataaaa 41
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaa 211
||| | |||||| |||||||||||||||| |||||||
Sbjct: 40 -tttaggataagatgaatggtcaaacatgtgagaaaaa 4
Score = 79.8 bits (40), Expect = 2e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 124 cataaattttttgaataagacgaatggtcaaacatgtgagaaaaagtc 171
>RF01062;MIR812;AAAA02016384.1/23964-23792 39946:Oryza sativa Indica
Group
Length = 173
Score = 178 bits (90), Expect = 3e-44
Identities = 108/114 (94%)
Strand = Plus / Minus
Query: 101 ttattttattatgagttgttttatcactcatagtactttaagtgtgatttatattttata 160
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 114 ttattttgttatgagttgttttatcactcatagtactttaagtgtgatttatatcttata 55
Query: 161 aatttgcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||||||||| |||||||||||||||||||||||||||| | ||||||||||
Sbjct: 54 catttgcataaattttttgaataagacgaatggtcaaacatatgagaaaaagtc 1
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 178 tgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||||||||| ||||||||||||| ||||||||||
Sbjct: 137 tgaataagacgactggtcaaacatgtgagaaaaagtc 173
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 56 atgtttgacaattcgtcttattcaaaaa 83
||||||||| ||||||||||||||||||
Sbjct: 14 atgtttgaccattcgtcttattcaaaaa 41
>RF01062;MIR812;AAAA02022735.1/12142-12286 39946:Oryza sativa Indica
Group
Length = 145
Score = 178 bits (90), Expect = 3e-44
Identities = 132/142 (92%), Gaps = 3/142 (2%)
Strand = Plus / Minus
Query: 61 tgacaattcgtcttattcaaaaacatt-acataattataatttattttattatgagttgt 119
|||| ||| |||||||||||||| ||| |||||||||||||||||||| |||||||||||
Sbjct: 141 tgaccatttgtcttattcaaaaaaatttacataattataatttattttgttatgagttgt 82
Query: 120 tttatcactcatagtactttaagtgtgatttatattttataaatttgcataaa-attttt 178
|||||||||||||||||||||||||||| |||||| ||||| ||||||||||| |||||
Sbjct: 81 tttatcactcatagtactttaagtgtga-ttatatcttatacatttgcataaactttttt 23
Query: 179 gaataagacgaatggtcaaaca 200
||||||||||||||||||||||
Sbjct: 22 gaataagacgaatggtcaaaca 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 57 tgtttgacaattcgtcttattcaaaaa 83
|||||||| ||||||||||||||||||
Sbjct: 1 tgtttgaccattcgtcttattcaaaaa 27
>RF01062;MIR812;AP001072.1/42208-42379 39947:Oryza sativa Japonica
Group
Length = 172
Score = 178 bits (90), Expect = 3e-44
Identities = 132/146 (90%)
Strand = Plus / Minus
Query: 66 attcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatc 125
|||||||||||| ||||| ||| ||||||||| ||||||| |||||||||||||||||
Sbjct: 149 attcgtcttatttaaaaaatttatgtaattataacttattttgttatgagttgttttatc 90
Query: 126 actcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataag 185
||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 89 actcatagtactttaagtgtgatttatatcttatacatttgtataaaatttttaaataag 30
Query: 186 acgaatggtcaaacatgtaagaaaaa 211
||||||||| ||| || |||||||||
Sbjct: 29 acgaatggttaaatatataagaaaaa 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagt 213
|||||| ||||| ||||||||||||| | ||||| || |||||||||
Sbjct: 125 cataaattttttaaataagacgaatgattaaacacgtgagaaaaagt 171
>RF01062;MIR812;AAAA02017697.1/14921-14753 39946:Oryza sativa Indica
Group
Length = 169
Score = 178 bits (90), Expect = 3e-44
Identities = 139/154 (90%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 59 tttgacaattcgtcttattcaaaaacattacataattataatttatttta-ttatgagtt 117
|||||| |||||||||||||||||| |||| |||||||||||| |||| |||| ||||
Sbjct: 157 tttgaccattcgtcttattcaaaaaatttacgtaattataatttttttttgttataagtt 98
Query: 118 gttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaatttt 177
||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 97 gttttatcactcatagtactttaagtgtgatttatatcttatacatttgtataaaatttt 38
Query: 178 tgaataagacgaatggtcaaacatgtaagaaaaa 211
||||||||| ||||||||||||| | |||||||
Sbjct: 37 tgaataagataaatggtcaaacatatgagaaaaa 4
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaa 198
|||| |||||||||||||||||||||||||
Sbjct: 128 taaattttttgaataagacgaatggtcaaa 157
>RF01062;MIR812;AAAA02010336.1/1310-1139 39946:Oryza sativa Indica
Group
Length = 172
Score = 176 bits (89), Expect = 1e-43
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| || | |||||||||||| |||| ||||||||||||||||| |||||
Sbjct: 161 acatgtttgacctttggacttattcaaaaaatttacgtaattataatttattttgttatg 102
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
||||||||||||||| |||||| ||||||| |||||||| | ||||| |||| |||||||
Sbjct: 101 agttgttttatcacttatagtattttaagtatgatttatgtcttatacatttccataaaa 42
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||||||||| || ||||||||||||||| ||||||||||
Sbjct: 41 tttttgaataatacaaatggtcaaacatgtgagaaaaagtc 1
Score = 44.1 bits (22), Expect = 0.001
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| |||||||||||| | || |||||||||||| | ||||||||
Sbjct: 127 taaattttttgaataagtccaaaggtcaaacatgtgaaaaaaagtc 172
>RF01062;MIR812;AAAA02024741.1/544-375 39946:Oryza sativa Indica
Group
Length = 170
Score = 176 bits (89), Expect = 1e-43
Identities = 145/161 (90%), Gaps = 2/161 (1%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
|||| |||||| |||||||||||||||||| |||| ||||||||||||||||| |||||
Sbjct: 159 acatatttgaccattcgtcttattcaaaaaatttacgtaattataatttattttgttatg 100
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
||||||||||| ||||||| |||||||||||| |||||||| ||||| | ||||||||||
Sbjct: 99 agttgttttattactcataatactttaagtgttatttatatcttataca-ttgcataaaa 41
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| |||||||||||| |||||||||||| | ||||||||
Sbjct: 40 ttttggaataagacgaa-ggtcaaacatgtgaaaaaaagtc 1
Score = 67.9 bits (34), Expect = 7e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| ||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 125 taaattttttgaataagacgaatggtcaaatatgtgagaaaaagtc 170
>RF01062;MIR812;AP008207.1/5882100-5882271 39947:Oryza sativa
Japonica Group
Length = 172
Score = 176 bits (89), Expect = 1e-43
Identities = 154/173 (89%), Gaps = 2/173 (1%)
Strand = Plus / Minus
Query: 43 gattttttcgtacatgtttgacaattcgtcttattcaaaaacattacataattataattt 102
||||||||| | |||||| || |||||||||||||||||| |||||||||||||||||
Sbjct: 172 gattttttctcatatgtttaaccattcgtcttattcaaaaaatttacataattataattt 113
Query: 103 attttattatgagttgttttatcactcatagtactttaagtgtga-tttatattttataa 161
||||| ||||||||| |||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 112 attttgttatgagttattttatcacttatagtactttaagtgtgattttatatcttatac 53
Query: 162 atttgcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| ||| || ||||| ||||||||||||| |||||||||| ||||||||||
Sbjct: 52 atttacat-aatttttttaataagacgaatgttcaaacatgtgagaaaaagtc 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaa 211
|||| ||||||||||||||||||||| |||||| | |||||||
Sbjct: 127 taaattttttgaataagacgaatggttaaacatatgagaaaaa 169
>RF01062;MIR812;AAAA02007641.1/10653-10824 39946:Oryza sativa Indica
Group
Length = 172
Score = 176 bits (89), Expect = 1e-43
Identities = 132/145 (91%), Gaps = 1/145 (0%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
|||||||| || |||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 161 acatgtttaaccattcgtcttattcaaaaaatttacataattataatttattttgttatg 102
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
|| |||||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 101 agctgttttattactcatagtactttaagtgtgatttatatcttatacatttgcat-aat 43
Query: 174 tttttgaataagacgaatggtcaaa 198
||||| ||||||||||||| |||||
Sbjct: 42 ttttttaataagacgaatgatcaaa 18
Score = 67.9 bits (34), Expect = 7e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| ||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 127 taaattttttgaataagacgaatggttaaacatgtgagaaaaagtc 172
>RF01062;MIR812;AAAA02014499.1/10833-11003 39946:Oryza sativa Indica
Group
Length = 171
Score = 174 bits (88), Expect = 4e-43
Identities = 149/168 (88%), Gaps = 1/168 (0%)
Strand = Plus / Minus
Query: 46 tttttcgtacatgtttgacaattcgtcttattcaaaaacattacataattataatttatt 105
|||||| |||||||||||| |||| ||||||||| ||| |||| ||||||||||| |||
Sbjct: 168 tttttcttacatgtttgaccattcatcttattcataaaatttacgtaattataatt-att 110
Query: 106 ttattatgagttgttttatcactcatagtactttaagtgtgatttatattttataaattt 165
|| ||| |||||||||||| ||| |||||| |||||||||||||||||| ||||| ||||
Sbjct: 109 ttgttacgagttgttttattacttatagtattttaagtgtgatttatatcttatacattt 50
Query: 166 gcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagt 213
|||||||||||||||| ||||||||| || |||||||| |||||||||
Sbjct: 49 gcataaaatttttgaaaaagacgaatagttaaacatgtgagaaaaagt 2
Score = 67.9 bits (34), Expect = 7e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| ||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 126 taaattttatgaataagatgaatggtcaaacatgtaagaaaaagtc 171
>RF01062;MIR812;AAAA02035210.1/25647-25472 39946:Oryza sativa Indica
Group
Length = 176
Score = 172 bits (87), Expect = 2e-42
Identities = 142/160 (88%), Gaps = 4/160 (2%)
Strand = Plus / Minus
Query: 56 atgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgag 115
||||||||| |||| | | ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 163 atgtttgaccattcatttgattcaaaaaatttacataattataatttattttattatgag 104
Query: 116 ttgttttatcactcatagtactttaagtgtgatttatat----tttataaatttgcataa 171
|| |||||||| | |||||||||||| |||||||||||| | |||| |||| ||||
Sbjct: 103 ttattttatcatttatagtactttaaatgtgatttatatcttatatatatatttatataa 44
Query: 172 aatttttgaataagacgaatggtcaaacatgtaagaaaaa 211
||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 aatttttgaataagacgaatggtcaaacatgtaagaaaaa 4
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 45 ttttttcgtacatgtttgacaattcgtcttattcaaaaa 83
||||||| |||||||||||| ||||||||||||||||||
Sbjct: 3 ttttttcttacatgtttgaccattcgtcttattcaaaaa 41
>RF01062;MIR812;AAAA02000501.1/39566-39732 39946:Oryza sativa Indica
Group
Length = 167
Score = 172 bits (87), Expect = 2e-42
Identities = 143/160 (89%), Gaps = 5/160 (3%)
Strand = Plus / Minus
Query: 55 catgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatga 114
||||||||| |||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 155 catgtttgatcattcgtcttattcaaaaa----acgtaattataatttattttgttatga 100
Query: 115 gttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaat 174
|||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| || |
Sbjct: 99 gttgttttatcacttatagtactttaagtgtgatttatatcttatatatttgcat-aatt 41
Query: 175 ttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||||||| | |||||||||||||||| ||||| ||||
Sbjct: 40 ttttgaataaaatgaatggtcaaacatgtgagaaatagtc 1
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagt 213
||||||||||||||||||| ||||||||| |||||||||
Sbjct: 127 tttttgaataagacgaatgatcaaacatgcgagaaaaagt 166
>RF01062;MIR812;AACV01010653.1/63854-63683 39947:Oryza sativa
Japonica Group
Length = 172
Score = 170 bits (86), Expect = 6e-42
Identities = 134/150 (89%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||||||||||||||||| |||| ||||| | |||||||||||||||
Sbjct: 161 acatgtttgaccattcgtcttattcaaaaaatttacgtaatttttatttattttattatg 102
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
|||||||||| || ||||| ||||||||||| ||||||||| |||| |||| |||||||
Sbjct: 101 agttgttttagcattcatattactttaagtgagatttatatcttatgcattttcataaaa 42
Query: 174 tttttgaataagacgaatggtcaaacatgt 203
|||||||||||||| |||||| ||||||||
Sbjct: 41 tttttgaataagacaaatggttaaacatgt 12
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 127 taaattttttgaataagacgaatggtcaaacatgtgagaaaaagtc 172
>RF01062;MIR812;ABRL01001705.1/39041-38869 65489:Oryza barthii
Length = 173
Score = 170 bits (86), Expect = 6e-42
Identities = 144/162 (88%), Gaps = 1/162 (0%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacatt-acataattataatttattttattat 112
||||||||||| |||| ||||||||||||| ||| || ||||||||||||||||| ||||
Sbjct: 162 acatgtttgaccattcatcttattcaaaaaaatttacgtaattataatttattttgttat 103
Query: 113 gagttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaa 172
|||||||||||| ||||||| ||||||||||| ||||||||||||||| |||| ||||
Sbjct: 102 gagttgttttattactcataatactttaagtgagatttatattttatacatttacatatt 43
Query: 173 atttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||||||||||||||| || ||| ||| |||||||||||
Sbjct: 42 ctttttgaataagacgaatagttaaatatggaagaaaaagtc 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 133 tttttgaataagatgaatggtcaaacatgtgagaaaaagtc 173
>RF01062;MIR812;AC120538.4/38340-38170 39947:Oryza sativa Japonica
Group
Length = 171
Score = 170 bits (86), Expect = 6e-42
Identities = 150/170 (88%), Gaps = 1/170 (0%)
Strand = Plus / Minus
Query: 45 ttttttcgtacatgtttgacaattcgtcttattcaaaaacattacataattataatttat 104
||||||| |||||||| | |||||||||||| ||||| ||| ||||| |||||||
Sbjct: 169 ttttttctcacatgtttaagcattcgtcttatttaaaaaatttatgtaattgtaatttac 110
Query: 105 tttattatgagttgttttatcactcatagtactttaagtgtgatttatattttataaatt 164
||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 109 tttgttatgagttattttatcactcatagtactttaagtgtgatttatatcttatacatt 50
Query: 165 tgcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
| |||||||||||| |||||||||||| ||||||||||| ||||||||||
Sbjct: 49 tacataaaattttt-aataagacgaatagtcaaacatgtgagaaaaagtc 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaa 211
|||||| ||||| ||||||||||||| | |||||||| |||||||
Sbjct: 124 cataaattttttaaataagacgaatgcttaaacatgtgagaaaaa 168
>RF01062;MIR812;AAAA02030491.1/52652-52480 39946:Oryza sativa Indica
Group
Length = 173
Score = 170 bits (86), Expect = 6e-42
Identities = 144/162 (88%), Gaps = 1/162 (0%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||||||||||||||||| | | |||||||| || ||||| ||| |
Sbjct: 162 acatgtttgactattcgtcttattcaaaaagttaaggtaattatagttcattttgttacg 103
Query: 114 agttgttttatcactcatagtactttaagtgtgattt-atattttataaatttgcataaa 172
|||| ||||||||||||||||| |||||||||||||| |||| ||||| |||||||||||
Sbjct: 102 agttattttatcactcatagtattttaagtgtgattttatatcttatacatttgcataaa 43
Query: 173 atttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 42 ttttttgaataagacgaatgatcaaacatgtgagaaaaagtc 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 133 tttttgaataagacgaatagtcaaacatgtgagaaaaagtc 173
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
|||||||||| ||||||||||||||||||
Sbjct: 12 acatgtttgatcattcgtcttattcaaaaa 41
>RF01062;MIR812;AAAA02028161.1/12642-12810 39946:Oryza sativa Indica
Group
Length = 169
Score = 168 bits (85), Expect = 2e-41
Identities = 145/161 (90%), Gaps = 3/161 (1%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||||||||||||||||| ||| |||||||||||||| || |||||
Sbjct: 158 acatgtttgaccattcgtcttattcaaaaaatttatgtaattataatttatcttgttatg 99
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
|||||||||| ||||||||||||||||||||||| ||||| | |||| | ||| ||||||
Sbjct: 98 agttgttttaccactcatagtactttaagtgtga-ttata-tctataca-ttgtataaaa 42
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 41 tttttgaataagacgaatggttaaacatgtgagaaaaagtc 1
Score = 79.8 bits (40), Expect = 2e-14
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 122 cataaattttttgaataagacgaatggtcaaacatgtgagaaaaagtc 169
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
|||||||| || ||||||||||||||||||
Sbjct: 12 acatgtttaaccattcgtcttattcaaaaa 41
>RF01062;MIR812;AAAA02030623.1/29278-29447 39946:Oryza sativa Indica
Group
Length = 170
Score = 168 bits (85), Expect = 2e-41
Identities = 112/121 (92%)
Strand = Plus / Minus
Query: 91 taattataatttattttattatgagttgttttatcactcatagtactttaagtgtgattt 150
|||||||||||||||||||||||||||||||||| | | |||||| ||||||||||||||
Sbjct: 124 taattataatttattttattatgagttgttttataatttatagtattttaagtgtgattt 65
Query: 151 atattttataaatttgcataaaatttttgaataagacgaatggtcaaacatgtaagaaaa 210
||| ||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 64 gtatcttatacatttgcataaaatttttgaataagacgaatggtcaaatatgtgagaaaa 5
Query: 211 a 211
|
Sbjct: 4 a 4
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||| ||||||||||| ||| |||||||| ||||||||||
Sbjct: 130 ttttttaataagacgaacggttaaacatgtgagaaaaagtc 170
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 44 attttttcgtacatgtttgacaattcgtcttattcaaaaa 83
|||||||| |||| |||||| ||||||||||||||||||
Sbjct: 2 attttttctcacatatttgaccattcgtcttattcaaaaa 41
>RF01062;MIR812;AP003631.3/87236-87068 39947:Oryza sativa Japonica
Group
Length = 169
Score = 167 bits (84), Expect = 1e-40
Identities = 108/116 (93%)
Strand = Plus / Minus
Query: 85 attacataattataatttattttattatgagttgttttatcactcatagtactttaagtg 144
||||||||||||||||||||||| || ||||||||||||||||| | ||||||||||||
Sbjct: 130 attacataattataatttattttgttgtgagttgttttatcacttaaagtactttaagta 71
Query: 145 tgatttatattttataaatttgcataaaatttttgaataagacgaatggtcaaaca 200
|||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||
Sbjct: 70 tgatttatattttatacatttgcataaaatttttaaataagacgaatagtcaaaca 15
>RF01062;MIR812;AP005759.3/16561-16718 39947:Oryza sativa Japonica
Group
Length = 158
Score = 165 bits (83), Expect = 4e-40
Identities = 104/111 (93%)
Strand = Plus / Minus
Query: 104 ttttattatgagttgttttatcactcatagtactttaagtgtgatttatattttataaat 163
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||
Sbjct: 111 ttttattatgagttgttttatcacccatagtactttaagtgtgatttatatcttatacat 52
Query: 164 ttgcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|| ||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 51 ttatataaagtttttgaataagacgaatggtcaaacatgtgagaaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaa 211
||||| ||||||| ||||||||||||||||||||||||
Sbjct: 118 tttttaaataagatgaatggtcaaacatgtaagaaaaa 155
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataa 93
||||||||||| ||||||||||||||||||| ||| ||||
Sbjct: 12 acatgtttgaccattcgtcttattcaaaaactttatataa 51
>RF01062;MIR812;AAAA02018694.1/18051-17879 39946:Oryza sativa Indica
Group
Length = 173
Score = 163 bits (82), Expect = 2e-39
Identities = 143/162 (88%), Gaps = 1/162 (0%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||||||||||||||||| |||| ||||||||||| |||| |||||
Sbjct: 162 acatgtttgaccattcgtcttattcaaaaaatttacgtaattataattgatttggttatg 103
Query: 114 agttgttttatcac-tcatagtactttaagtgtgatttatattttataaatttgcataaa 172
||| || |||||| ||||||||||||||||||||| ||||| ||||| || | || |||
Sbjct: 102 agtagtagtatcacatcatagtactttaagtgtgatatatatattatacatgtacaaaaa 43
Query: 173 atttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 42 atttttgaataagacgaatgttcaaacatgtgagaaaaagtc 1
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 128 taaattttttgaataagacgaatggtcaaacatgtgagaaaaagtc 173
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
|||||||||| ||||||||||||||||||
Sbjct: 12 acatgtttgaacattcgtcttattcaaaaa 41
>RF01062;MIR812;AL606990.3/82137-81967 39947:Oryza sativa Japonica
Group
Length = 171
Score = 163 bits (82), Expect = 2e-39
Identities = 143/162 (88%), Gaps = 1/162 (0%)
Strand = Plus / Minus
Query: 53 tacatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattat 112
|||||||||||| |||||||||||| ||||| |||| |||||||||||| || ||||||
Sbjct: 161 tacatgtttgaccattcgtcttatttaaaaaatttacgtaattataatttgttatattat 102
Query: 113 gagttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaa 172
||||||||||| ||||||| |||||||| ||||||||||| ||||| |||||||||||
Sbjct: 101 aagttgttttattactcatactactttaaatgtgatttata-cttatacatttgcataaa 43
Query: 173 atttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
| ||||||||||||||| |||||||||| | ||||||||||
Sbjct: 42 aattttgaataagacgattggtcaaacaggcgagaaaaagtc 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaa 211
|||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 126 taaattttttaaataagacgaatggtcaaacatgtaaaaaaaa 168
>RF01062;MIR812;AC136522.3/132078-131907 39947:Oryza sativa Japonica
Group
Length = 172
Score = 161 bits (81), Expect = 6e-39
Identities = 133/149 (89%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
|||||||| || ||| |||||||||||||| |||||||||||||| ||||||| |||||
Sbjct: 161 acatgtttaaccatttgtcttattcaaaaaatttacataattataacttattttgttatg 102
Query: 114 agttgttttatcactcatagtactttaag-tgtgatttatattttataaatttgcataaa 172
||||||||||| ||| ||||||||||||| |||||| ||||| ||||| || ||||||||
Sbjct: 101 agttgttttattacttatagtactttaagttgtgatatatatcttatacatctgcataaa 42
Query: 173 atttttgaataagacgaatggtcaaacat 201
|||||| ||||| ||||||||||||||||
Sbjct: 41 atttttaaataaaacgaatggtcaaacat 13
Score = 58.0 bits (29), Expect = 6e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagt 213
|||| |||||||||||||| |||||| |||||||| |||||||||
Sbjct: 127 taaattttttgaataagacaaatggttaaacatgtgagaaaaagt 171
>RF01062;MIR812;AACV01018817.1/24068-23899 39947:Oryza sativa
Japonica Group
Length = 170
Score = 161 bits (81), Expect = 6e-39
Identities = 130/145 (89%), Gaps = 1/145 (0%)
Strand = Plus / Minus
Query: 60 ttgacaattcgtcttattcaaaaaca-ttacataattataatttattttattatgagttg 118
||||| |||||||||||||||||| | |||| ||||||||||||||||| ||||||||||
Sbjct: 156 ttgaccattcgtcttattcaaaaaaaattacgtaattataatttattttgttatgagttg 97
Query: 119 ttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaattttt 178
|||||||||||||||| |||||||||||||||||| ||||| |||| | || |||||
Sbjct: 96 gtttatcactcatagtattttaagtgtgatttatatcttatatatttataaaatgttttt 37
Query: 179 gaataagacgaatggtcaaacatgt 203
||||||||||||||||||||||||
Sbjct: 36 aaataagacgaatggtcaaacatgt 12
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaacatt 87
||||||||||| |||||||||||| |||||||||
Sbjct: 12 acatgtttgaccattcgtcttatttaaaaacatt 45
Score = 50.1 bits (25), Expect = 2e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaa 210
|||||||||||||||||||||||| ||| ||| ||||
Sbjct: 133 tttttgaataagacgaatggtcaagcatataaaaaaa 169
>RF01062;MIR812;AAAA02020530.1/5977-5814 39946:Oryza sativa Indica
Group
Length = 164
Score = 159 bits (80), Expect = 2e-38
Identities = 139/158 (87%), Gaps = 8/158 (5%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||||||||||| ||||| |||| ||||||||||||||||| |||||
Sbjct: 153 acatgtttgaccattcgtcttattaaaaaaatttacgtaattataatttattttgttatg 94
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
||||||||||||||| |||||||| |||||||||| ||||| ||||||||||||
Sbjct: 93 agttgttttatcacttatagtact-------tgatttatatcttatatatttgcataaaa 41
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaa 211
||||| ||||||||||||||||||| || |||||||||
Sbjct: 40 ttttt-aataagacgaatggtcaaagatataagaaaaa 4
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaag 212
|||| ||||| |||||||||||||||||||||||| ||||||||
Sbjct: 119 taaatttttttaataagacgaatggtcaaacatgtgagaaaaag 162
>RF01062;MIR812;AP008207.1/25581615-25581444 39947:Oryza sativa
Japonica Group
Length = 172
Score = 157 bits (79), Expect = 9e-38
Identities = 127/143 (88%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
||||||| |||| ||||||| ||||| ||||| || |||||||||||||| || |||| |
Sbjct: 157 gtttgaccattcttcttattaaaaaaaattacgtatttataatttattttgttgtgagct 98
Query: 118 gttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaatttt 177
||||||||||||||||||||||||| |||||||||| ||||| |||||||||||| |||
Sbjct: 97 gttttatcactcatagtactttaagcatgatttatatcttatacatttgcataaaacttt 38
Query: 178 tgaataagacgaatggtcaaaca 200
|||| ||||| ||||||||||||
Sbjct: 37 tgaacaagacaaatggtcaaaca 15
>RF01062;MIR812;AF229199.1/17239-17079 4530:Oryza sativa (rice)
Length = 161
Score = 157 bits (79), Expect = 9e-38
Identities = 137/158 (86%), Gaps = 10/158 (6%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||| ||||||||||||| |||| ||||||||||||||||| |||||
Sbjct: 151 acatgtttgactattcatcttattcaaaaaatttacgtaattataatttattttgttatg 92
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
|||||||||||||||||||||| | ||||||| ||||| ||||||||||||
Sbjct: 91 agttgttttatcactcatagtaat----------tttatatcttatacatttgcataaaa 42
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaa 211
||||| |||||||||||||||||||||||| |||||||
Sbjct: 41 tttttaaataagacgaatggtcaaacatgtgagaaaaa 4
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 43 gattttttcgtacatgtttgacaattcgtcttattcaaaaa 83
||||||||| ||||||||||| |||||||||||| |||||
Sbjct: 1 gattttttctcacatgtttgaccattcgtcttatttaaaaa 41
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgt 203
|||| ||||||||||||| |||| |||||||||||
Sbjct: 117 taaattttttgaataagatgaatagtcaaacatgt 151
>RF01062;MIR812;AAAA02025359.1/44963-45135 39946:Oryza sativa Indica
Group
Length = 173
Score = 155 bits (78), Expect = 4e-37
Identities = 142/162 (87%), Gaps = 1/162 (0%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||| ||||||||||||| |||| |||||||||| ||| | |||||
Sbjct: 162 acatgtttgaccattcatcttattcaaaaaatttacgtaattataatatatatagttatg 103
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
||| | | ||||||||||| ||||||||||||||| ||||| |||| ||||| ||||||
Sbjct: 102 agtagatgtatcactcataatactttaagtgtgatatatatcgtatacatttgtataaaa 43
Query: 174 tttttgaataaga-cgaatggtcaaacatgtaagaaaaagtc 214
||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 42 tttttgaataagaccgaatggtcaaacatgtgagaaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| ||||||||||||| |||||||||||||||| ||| ||||||
Sbjct: 128 taaattttttgaataagatgaatggtcaaacatgtgagacaaagtc 173
>RF01062;MIR812;AACV01019903.1/2501-2325 39947:Oryza sativa Japonica
Group
Length = 177
Score = 155 bits (78), Expect = 4e-37
Identities = 136/155 (87%), Gaps = 4/155 (2%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattac----ataattataatttattttat 109
||||||||||| ||||||| |||||||||| ||||| |||||||||||||||||||
Sbjct: 165 acatgtttgaccattcgtcgtattcaaaaaaattacgtaattaattataatttattttat 106
Query: 110 tatgagttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcat 169
||||||||||||||||||| |||| |||||| |||||||||| ||||| ||||||||
Sbjct: 105 tatgagttgttttatcacttgaagtattttaagcatgatttatatcttatacatttgcat 46
Query: 170 aaaatttttgaataagacgaatggtcaaacatgta 204
|| ||||| |||||||||||||||||||||||||
Sbjct: 45 aatttttttaaataagacgaatggtcaaacatgta 11
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgt 203
|||||||||| |||||||||||||||||||
Sbjct: 136 tttttgaatacgacgaatggtcaaacatgt 165
Score = 48.1 bits (24), Expect = 6e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 53 tacatgtttgacaattcgtcttattcaaaaacatta 88
|||||||||||| |||||||||||| ||||| ||||
Sbjct: 11 tacatgtttgaccattcgtcttatttaaaaaaatta 46
>RF01062;MIR812;AACV01017127.1/722-893 39947:Oryza sativa Japonica
Group
Length = 172
Score = 153 bits (77), Expect = 1e-36
Identities = 140/161 (86%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||||||||||| ||||| ||| ||| |||||||||||| |||||
Sbjct: 161 acatgtttgaccattcgtcttattaaaaaaatttatgtaaggataatttattttgttatg 102
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
|||||||||||||| |||||||||||||||||||||||||| ||||| |||| ||||| |
Sbjct: 101 agttgttttatcacacatagtactttaagtgtgatttatatcttatacatttacataata 42
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||| ||||| ||| || ||||||||| | |||||||||
Sbjct: 41 tttttaaataaaacgcatagtcaaacatttgggaaaaagtc 1
Score = 58.0 bits (29), Expect = 6e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgt 203
|||||| ||||| ||||||||||||||||||||||||
Sbjct: 125 cataaatttttttaataagacgaatggtcaaacatgt 161
>RF01062;MIR812;AP003881.3/10626-10456 39947:Oryza sativa Japonica
Group
Length = 171
Score = 153 bits (77), Expect = 1e-36
Identities = 129/145 (88%), Gaps = 1/145 (0%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| || ||||||| ||||| ||||||||||||||||||||||| || ||
Sbjct: 160 acatgtttgaccatctatcttatttaaaaaaattacataattataatttattttgttgtg 101
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
|||||||| |||||||| |||| |||||| |||||||||| ||||| ||||||||||||
Sbjct: 100 agttgttt-atcactcaaagtattttaagcatgatttatatcttatacatttgcataaaa 42
Query: 174 tttttgaataagacgaatggtcaaa 198
||||||||||| |||||||||||||
Sbjct: 41 tttttgaataaaacgaatggtcaaa 17
>RF01062;MIR812;AC135568.3/96133-96302 39947:Oryza sativa Japonica
Group
Length = 170
Score = 151 bits (76), Expect = 6e-36
Identities = 150/172 (87%), Gaps = 2/172 (1%)
Strand = Plus / Minus
Query: 43 gattttttcgtacatgtttgacaattcgtcttattcaaaaacattacataattataattt 102
||||||||| ||||||||||| || |||||||| ||||| |||| ||||||||||||
Sbjct: 170 gattttttctcacatgtttgaccgtttgtcttatttaaaaaatttacgtaattataattt 111
Query: 103 attttattatgagttgttttatcactcatagtactttaagtgtgatttatattttataaa 162
||||| ||||||||| |||||||||||| | || |||||||||||||||||| ||||| |
Sbjct: 110 atttt-ttatgagttattttatcactcacaatattttaagtgtgatttatatcttataca 52
Query: 163 tttgcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| | |||| || ||||||||||||||||||||||||| ||||||||||
Sbjct: 51 tttgtaaaaaaaatt-gaataagacgaatggtcaaacatgtgagaaaaagtc 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaa 80
||||||||||| |||||||||||||||
Sbjct: 12 acatgtttgaccattcgtcttattcaa 38
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaa 211
|||| ||||| |||||||| || |||||||||||| |||||||
Sbjct: 125 taaattttttaaataagacaaacggtcaaacatgtgagaaaaa 167
>RF01062;MIR812;AP008213.1/25595680-25595818 39947:Oryza sativa
Japonica Group
Length = 139
Score = 151 bits (76), Expect = 6e-36
Identities = 88/92 (95%)
Strand = Plus / Minus
Query: 123 atcactcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaat 182
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 92 atcactcatagtactttaagtgtgatttatatattatatatttgcataaaatttttgaat 33
Query: 183 aagacgaatggtcaaacatgtaagaaaaagtc 214
|||||||||||| |||||||| ||||||||||
Sbjct: 32 aagacgaatggttaaacatgtgagaaaaagtc 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| ||||||||||||||||| |||||| || || ||||||||||
Sbjct: 94 taaattttttgaataagacgaaaggtcaatcacgtgagaaaaagtc 139
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
|||||||| || ||||||||||||||||||
Sbjct: 12 acatgtttaaccattcgtcttattcaaaaa 41
>RF01062;MIR812;AACV01002249.1/32791-32620 39947:Oryza sativa
Japonica Group
Length = 172
Score = 151 bits (76), Expect = 6e-36
Identities = 127/144 (88%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
||||||| |||| ||||||||||||| |||| |||||||||||||||| || ||||||
Sbjct: 157 gtttgaccattcatcttattcaaaaaatttacgtaattataatttatttcgttgtgagtt 98
Query: 118 gttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaatttt 177
||||||||||||| |||| |||||| ||||||||||| ||||| |||||||||| ||||
Sbjct: 97 gttttatcactcaaagtattttaagcgtgatttatatcttatacatttgcataagttttt 38
Query: 178 tgaataagacgaatggtcaaacat 201
| ||||||||||||| ||||||||
Sbjct: 37 ttaataagacgaatgatcaaacat 14
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaac 199
|||| ||||||||||||| ||||||||||||
Sbjct: 127 taaattttttgaataagatgaatggtcaaac 157
>RF01062;MIR812;AAAA02004295.1/15833-15660 39946:Oryza sativa Indica
Group
Length = 174
Score = 149 bits (75), Expect = 2e-35
Identities = 143/163 (87%), Gaps = 2/163 (1%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||||||||||| ||||| |||| ||||| ||||||||||| |||||
Sbjct: 163 acatgtttgaccattcgtcttatttaaaaaatttacgtaattgtaatttattttgttatg 104
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatat-tttataaatttgcataaa 172
|||||||||||||||||||||| |||||||||||||||||| | |||| |||| |||||
Sbjct: 103 agttgttttatcactcatagtattttaagtgtgatttatatctatatacatttaaataaa 44
Query: 173 at-ttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|| | |||||||| |||||||||||||||| ||| ||||||
Sbjct: 43 atatgaagaataagaagaatggtcaaacatgtgagataaagtc 1
Score = 67.9 bits (34), Expect = 7e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| ||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 129 taaattttttaaataagacgaatggtcaaacatgtgagaaaaagtc 174
>RF01062;MIR812;AP004861.3/55699-55872 39947:Oryza sativa Japonica
Group
Length = 174
Score = 149 bits (75), Expect = 2e-35
Identities = 145/166 (87%), Gaps = 8/166 (4%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacatt-acataattataatttattttattat 112
||||||||||| ||| ||||||||||||| ||| || |||||||||||| || ||||
Sbjct: 163 acatgtttgaccatttatcttattcaaaaaaatttacgtaattataattt---ttgttat 107
Query: 113 gagttgttttatcactcat----agtactttaagtgtgatttatattttataaatttgca 168
|||||||||||||||||| |||||||||||| |||||||||| || || |||||||
Sbjct: 106 aagttgttttatcactcatgcatagtactttaagtatgatttatatattttacatttgca 47
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 46 taaaatttttgaataagacgaatggtcaaacttataagaaaaagtc 1
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 134 tttttgaataagataaatggtcaaacatgtgagaaaaagtc 174
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 58 gtttgacaattcgtcttattcaaaaa 83
||||||| ||||||||||||||||||
Sbjct: 16 gtttgaccattcgtcttattcaaaaa 41
>RF01062;MIR812;AL662986.3/67470-67299 39947:Oryza sativa Japonica
Group
Length = 172
Score = 149 bits (75), Expect = 2e-35
Identities = 138/159 (86%)
Strand = Plus / Minus
Query: 56 atgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgag 115
||||||||| |||||||||||||||||| ||| |||||||||| ||| | | |||||
Sbjct: 159 atgtttgaccattcgtcttattcaaaaaatgtacgtaattataatctatctagtcatgag 100
Query: 116 ttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaatt 175
||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| |||
Sbjct: 99 ttgttttatcactcatagtactttaagtgtgatttatatcttatacatttacattttatt 40
Query: 176 tttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| || ||||||||||||||| || | ||||||||||
Sbjct: 39 tttgtattagacgaatggtcaaatatatgagaaaaagtc 1
Score = 65.9 bits (33), Expect = 3e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||||||||||||||||||||||||| | ||||||||||
Sbjct: 132 tttttgaataagacgaatggtcaaacatttgagaaaaagtc 172
>RF01062;MIR812;AACV01002603.1/11478-11637 39947:Oryza sativa
Japonica Group
Length = 160
Score = 147 bits (74), Expect = 9e-35
Identities = 92/98 (93%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 149 acatgtttgactattcgtcttattcaaaaaatttacataattataatttattttatcatg 90
Query: 114 agttgttttatcactcatagtactttaagtgtgattta 151
||||||||||||| |||||||| |||||||||||||||
Sbjct: 89 agttgttttatcaatcatagtattttaagtgtgattta 52
Score = 54.0 bits (27), Expect = 1e-06
Identities = 40/43 (93%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataatta 96
||||||||||| |||||||||||||||||| ||||| ||||||
Sbjct: 12 acatgtttgaccattcgtcttattcaaaaa-attacgtaatta 53
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgt 203
|||| |||||||||||||||||| |||||||||||
Sbjct: 115 taaattttttgaataagacgaatagtcaaacatgt 149
>RF01062;MIR812;ABRL01002355.1/1954-1783 65489:Oryza barthii
Length = 172
Score = 145 bits (73), Expect = 4e-34
Identities = 118/133 (88%)
Strand = Plus / Minus
Query: 66 attcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatc 125
|||||||||||| ||||| |||| ||||||||||||||| | || ||||||||||| ||
Sbjct: 149 attcgtcttattaaaaaaatttacgtaattataatttattatgttgtgagttgttttgtc 90
Query: 126 actcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataag 185
||||| |||||||||||| |||||||||| ||||| |||||||||||||| || ||||||
Sbjct: 89 actcaaagtactttaagtatgatttatatcttatacatttgcataaaattcttaaataag 30
Query: 186 acgaatggtcaaa 198
| |||||||||||
Sbjct: 29 atgaatggtcaaa 17
>RF01062;MIR812;AP003629.3/144684-144855 39947:Oryza sativa Japonica
Group
Length = 172
Score = 145 bits (73), Expect = 4e-34
Identities = 117/128 (91%), Gaps = 4/128 (3%)
Strand = Plus / Minus
Query: 66 attcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatc 125
|||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 149 attcgtcttattaaaaaa-attacataattataatttattttattgtgagttgttttatc 91
Query: 126 actcatagtactttaagtgtgatt--tatattttataaatttgcataaaatttttgaata 183
||||| ||||||||||| ||||| ||||| ||||| |||||||| |||||||||||||
Sbjct: 90 actcaaagtactttaagcatgatttatatatcttatacatttgcat-aaatttttgaata 32
Query: 184 agacgaat 191
||||||||
Sbjct: 31 agacgaat 24
>RF01062;MIR812;AP008217.1/7390411-7390239 39947:Oryza sativa
Japonica Group
Length = 173
Score = 145 bits (73), Expect = 4e-34
Identities = 128/145 (88%), Gaps = 1/145 (0%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacatt-acataattataatttattttattatgagt 116
||||||| |||||||||||||||||| ||| | ||||||||||||||| | || |||||
Sbjct: 158 gtttgactattcgtcttattcaaaaaaatttatgtaattataatttattatgttgtgagt 99
Query: 117 tgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaattt 176
|||||||||||||| |||| |||||| ||||| |||| ||||| ||||| |||||||||
Sbjct: 98 tgttttatcactcaaagtattttaagcatgattcatatcttatacatttgtataaaattt 39
Query: 177 ttgaataagacgaatggtcaaacat 201
|||||||||||||||||||| ||||
Sbjct: 38 ttgaataagacgaatggtcagacat 14
Score = 44.1 bits (22), Expect = 0.001
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaac 199
|||||||||||||||||| |||||||
Sbjct: 133 tttttgaataagacgaatagtcaaac 158
>RF01062;MIR812;AAAA02034103.1/5563-5730 39946:Oryza sativa Indica
Group
Length = 168
Score = 141 bits (71), Expect = 5e-33
Identities = 128/146 (87%), Gaps = 2/146 (1%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||| ||||||| ||||| ||| ||||||||||||||||| || ||
Sbjct: 158 acatgtttgaccattcatcttattaaaaaaaattg--taattataatttattttgttgtg 101
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
|| |||| ||||||||| ||||||||||| |||||||||| ||||| |||||||||||
Sbjct: 100 agatgttgtatcactcaaagtactttaagcatgatttatatcttatacatttgcataaat 41
Query: 174 tttttgaataagacgaatggtcaaac 199
||||| ||||||||||||||||||||
Sbjct: 40 tttttaaataagacgaatggtcaaac 15
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgt 203
||||| ||||||| ||||||||||||||||
Sbjct: 129 ttttttaataagatgaatggtcaaacatgt 158
>RF01062;MIR812;AAAA02022811.1/27699-27874 39946:Oryza sativa Indica
Group
Length = 176
Score = 139 bits (70), Expect = 2e-32
Identities = 148/166 (89%), Gaps = 6/166 (3%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||||||||||||||||| |||| ||||||||||||||||| |||||
Sbjct: 165 acatgtttgaccattcgtcttattcaaaaaatttacgtaattataatttattttgttatg 106
Query: 114 agttgttttatcactca-tagtactttaagtgtg-atttat-at-tttataaatttgcat 169
||||| ||||||||| | |||||||||||||||| |||||| || || ||| |||||| |
Sbjct: 105 agttg-tttatcactaattagtactttaagtgtgcatttatcatcttcatacatttgcct 47
Query: 170 aaaatttttgaat-aagacgaatggtcaaacatgtaagaaaaagtc 214
|||||||| |||| ||||| ||||||||||||||| ||||||||||
Sbjct: 46 aaaattttagaatcaagacaaatggtcaaacatgtgagaaaaagtc 1
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 131 taaattttttgaataagacgaatggtcaaacatgtgagaaaaagtc 176
>RF01062;MIR812;AAAA02022116.1/15840-16009 39946:Oryza sativa Indica
Group
Length = 170
Score = 139 bits (70), Expect = 2e-32
Identities = 122/138 (88%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 66 attcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatc 125
|||||||||||| ||||| |||| ||||||||||||||||| |||||||||||||||||
Sbjct: 148 attcgtcttatttaaaaaatttacgtaattataatttattttgttatgagttgttttatc 89
Query: 126 actcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataag 185
| | | ||||||||||| |||||||||||||||| |||| ||||||||||| ||||||
Sbjct: 88 atttaaagtactttaagcatgatttatattttatatatttatataaaattttt-aataag 30
Query: 186 acgaatggtcaaacatgt 203
| ||||||| ||||||||
Sbjct: 29 atgaatggtgaaacatgt 12
>RF01062;MIR812;AACV01005908.1/41538-41367 39947:Oryza sativa
Japonica Group
Length = 172
Score = 139 bits (70), Expect = 2e-32
Identities = 122/138 (88%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 66 attcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatc 125
|||| ||||||| ||||| ||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 148 attcatcttattaaaaaa-attacttaattataatttattttgttgtgagttgttttatc 90
Query: 126 actcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataag 185
| ||| ||||||||||| | |||||||| ||||| |||| ||||||||||||||||||
Sbjct: 89 agtcaaagtactttaagcataatttatatcttatatatttacataaaatttttgaataaa 30
Query: 186 acgaatggtcaaacatgt 203
||||||| ||||||||||
Sbjct: 29 acgaatgatcaaacatgt 12
>RF01058;MIR806;AP006616.2/109863-109626 39947:Oryza sativa Japonica
Group
Length = 238
Score = 139 bits (70), Expect = 2e-32
Identities = 191/229 (83%), Gaps = 3/229 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| ||||||||||||||||||||| | ||||| ||||| | || ||||||| |||
Sbjct: 1 atactacctccgttttttaatagatgatactgttgactttttgttgcacgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 61 cgtcttattcaaaaaatgtacgtaattataatttattttgttacgagttgttttatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgc-ataaaatttttgaataagac 187
|| | ||||||||| |||||||||| | |||||| | |||| |||||| ||||
Sbjct: 121 caaaatactttaagcatgatttatatct--ggcatttgcaaaaaaaaaattgaatgagac 178
Query: 188 gaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaa 236
||||||||||| || | ||||||||||||| ||||||||||||||||
Sbjct: 179 gaatggtcaaatgtgcgacaaaaagtcaacggcgtcatctattaaaaaa 227
Score = 101 bits (51), Expect = 5e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
|||||||||||||||||||||||||| || || ||||||||||| || ||||||||||||
Sbjct: 75 tttttgaataagacgaatggtcaaacgtgcaacaaaaagtcaacagtatcatctattaaa 16
Query: 234 aaacggagggagtat 248
||||||||| |||||
Sbjct: 15 aaacggaggtagtat 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 21 ttttttaatagatgacgccgttgatttttt 50
|||||||||||||||||||||||| |||||
Sbjct: 227 ttttttaatagatgacgccgttgacttttt 198
>RF01062;MIR812;AL731601.3/51219-51052 39947:Oryza sativa Japonica
Group
Length = 168
Score = 137 bits (69), Expect = 9e-32
Identities = 130/149 (87%), Gaps = 6/149 (4%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
|||||||| || |||||||||||||||||| |||| |||||||| ||||||| |||||
Sbjct: 157 acatgtttaaccattcgtcttattcaaaaaatttacgtaattatagcttattttgttatg 98
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaa- 172
|||| ||||||||||||||||||| |||||||||||| ||||| ||||| |||||
Sbjct: 97 agttattttatcactcatagtact-----tgtgatttatatcttatatatttgtataaat 43
Query: 173 atttttgaataagacgaatggtcaaacat 201
||||||||||||||||||||||||||||
Sbjct: 42 ttttttgaataagacgaatggtcaaacat 14
Score = 65.9 bits (33), Expect = 3e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagt 213
|||| ||||||||||||||||||||| |||||||| |||||||||
Sbjct: 123 taaattttttgaataagacgaatggttaaacatgtgagaaaaagt 167
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 56 atgtttgacaattcgtcttattcaaaaa 83
||||||||| ||||||||||||||||||
Sbjct: 14 atgtttgaccattcgtcttattcaaaaa 41
>RF01062;MIR812;AK241646.1/1651-1823 39947:Oryza sativa Japonica
Group
Length = 173
Score = 135 bits (68), Expect = 3e-31
Identities = 126/145 (86%), Gaps = 4/145 (2%)
Strand = Plus / Minus
Query: 59 tttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagttg 118
|||||| |||||||||||| ||||| |||||||||| ||||||||| || |||| ||
Sbjct: 157 tttgaccattcgtcttattaaaaaa----acataattattatttattttgttgtgagatg 102
Query: 119 ttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaattttt 178
|||||||||||| | ||||||||| ||||||||||| |||| |||| |||||| ||||
Sbjct: 101 ttttatcactcaaaatactttaagcatgatttatattctatacatttacataaattttta 42
Query: 179 gaataagacgaatggtcaaacatgt 203
|||||||||||||||||||||||||
Sbjct: 41 gaataagacgaatggtcaaacatgt 17
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
||||||||||| ||||||||||||| ||||
Sbjct: 17 acatgtttgaccattcgtcttattctaaaa 46
>RF01062;MIR812;AACV01005421.1/28557-28726 39947:Oryza sativa
Japonica Group
Length = 170
Score = 133 bits (67), Expect = 1e-30
Identities = 127/146 (86%), Gaps = 2/146 (1%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
||||||| |||||| ||||||||||| ||| ||||||||||||||||| || |||||
Sbjct: 155 gtttgaccattcgttttattcaaaaaatttatgtaattataatttattttgtt--gagtt 98
Query: 118 gttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaatttt 177
|||||| |||||| ||||||||||| ||||||||| ||||| ||||||||||||||||
Sbjct: 97 gttttaacactcaaagtactttaagcatgatttataccttatacatttgcataaaatttt 38
Query: 178 tgaataagacgaatggtcaaacatgt 203
||||||| | |||||||||||||||
Sbjct: 37 tgaataaaataaatggtcaaacatgt 12
Score = 56.0 bits (28), Expect = 3e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||| ||||||||||| |||||||||||||| ||| | ||||||||
Sbjct: 123 cataaattttttgaataaaacgaatggtcaaacgtgtgacaaaaagtc 170
>RF01062;MIR812;AAAA02035851.1/893-723 39946:Oryza sativa Indica
Group
Length = 171
Score = 131 bits (66), Expect = 5e-30
Identities = 146/171 (85%), Gaps = 5/171 (2%)
Strand = Plus / Minus
Query: 46 tttttcgtacatgtttgacaattcgtcttattcaaaaacattacataattataatttatt 105
|||||| ||||||||| || |||| ||||||| ||||| |||| |||||||||||||||
Sbjct: 168 tttttcttacatgtttaaccattcatcttatttaaaaaatttacgtaattataatttatt 109
Query: 106 ttattatgagttgttttatcactcatagtactttaagtgtgatttatattttataaattt 165
|| |||| |||| |||||||||||||| ||||||| ||||||||||||| ||||| ||||
Sbjct: 108 ttgttataagttattttatcactcataatactttatgtgtgatttatatcttatatattt 49
Query: 166 gcataaaa--tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||| ||||| ||||||||||||| ||||||| | ||||||||||
Sbjct: 48 ---taaaattttttttaataagacgaatgaccaaacatatgagaaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| ||||| ||||||| ||||||| |||||||||||||||||||
Sbjct: 126 taaattttttaaataagatgaatggttaaacatgtaagaaaaagtc 171
>RF01062;MIR812;FJ581044.1/184959-185130 4538:Oryza glaberrima
(African rice)
Length = 172
Score = 131 bits (66), Expect = 5e-30
Identities = 114/130 (87%)
Strand = Plus / Minus
Query: 74 tattcaaaaacattacataattataatttattttattatgagttgttttatcactcatag 133
||||||||| ||||| | ||||||||||||| |||| ||||||| ||||||||| | ||
Sbjct: 141 tattcaaaacaattacgttattataatttattgtattgtgagttgctttatcacttaaag 82
Query: 134 tactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacgaatgg 193
|| |||||| ||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 81 tattttaagcgtgatttatatcttatacatttgcataaaatttttgaataagacgaaaaa 22
Query: 194 tcaaacatgt 203
||||||||||
Sbjct: 21 tcaaacatgt 12
>RF01062;MIR812;AAAA02024001.1/5837-6011 39946:Oryza sativa Indica
Group
Length = 175
Score = 131 bits (66), Expect = 5e-30
Identities = 88/94 (93%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 122 tatcactcatagtactttaagtgtgatttatatt-ttataaatttgcataaaatttttga 180
||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||||||
Sbjct: 94 tatcactcatagtactttaagcgtgatttataatcttatacatttgcataaaatttttga 35
Query: 181 ataagacgaatggtcaaacatgtaagaaaaagtc 214
||| ||||||||||||||||||| ||||||||||
Sbjct: 34 ataggacgaatggtcaaacatgtgagaaaaagtc 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 185 gacgaatggtcaaacatgtaagaaaaagtc 214
||||||||||||||||||| ||||||||||
Sbjct: 146 gacgaatggtcaaacatgtgagaaaaagtc 175
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
||||||||||| ||||||| ||||||||||
Sbjct: 12 acatgtttgaccattcgtcctattcaaaaa 41
>RF01062;MIR812;AAAA02035379.1/18218-18392 39946:Oryza sativa Indica
Group
Length = 175
Score = 127 bits (64), Expect = 8e-29
Identities = 88/96 (91%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||| ||||||||||||| | || |||||| |||||||||| |||||
Sbjct: 164 acatgtttgaccattcatcttattcaaaaaattcacgtaattacaatttattttgttatg 105
Query: 114 agttgttttatcactcatagtactttaagtgtgatt 149
||||||||||||||||||||||||||||||||||||
Sbjct: 104 agttgttttatcactcatagtactttaagtgtgatt 69
Score = 65.9 bits (33), Expect = 3e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 135 tttttgaataagatgaatggtcaaacatgtgagaaaaagtc 175
>RF01062;MIR812;AAAA02003836.1/68277-68107 39946:Oryza sativa Indica
Group
Length = 171
Score = 127 bits (64), Expect = 8e-29
Identities = 97/108 (89%)
Strand = Plus / Minus
Query: 91 taattataatttattttattatgagttgttttatcactcatagtactttaagtgtgattt 150
||||||||||||||||| ||||||||||||| |||||||| | ||||||| | | ||||
Sbjct: 124 taattataatttattttgttatgagttgtttaatcactcaaaatactttaggcataattt 65
Query: 151 atattttataaatttgcataaaatttttgaataagacgaatggtcaaa 198
|||||||||| ||||||||||||||||| ||||||| |||||||||||
Sbjct: 64 atattttatacatttgcataaaatttttaaataagatgaatggtcaaa 17
>RF01062;MIR812;AACV01005063.1/17010-17184 39947:Oryza sativa
Japonica Group
Length = 175
Score = 127 bits (64), Expect = 8e-29
Identities = 129/150 (86%), Gaps = 3/150 (2%)
Strand = Plus / Minus
Query: 57 tgtttgacaattcgtcttattcaaaaaca---ttacataattataatttattttattatg 113
|||||||| ||||||||| |||||||| | |||| ||||||||||||||||| || ||
Sbjct: 161 tgtttgaccattcgtcttgttcaaaaaaaaacttacgtaattataatttattttgttgtg 102
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaa 173
||||||||||||||||| ||||||||| || ||||||| ||||| ||||||||| |
Sbjct: 101 agttgttttatcactcaaggtactttaaacatggtttatatcttatacatttgcatacat 42
Query: 174 tttttgaataagacgaatggtcaaacatgt 203
||||||||||| ||||||| ||||||||||
Sbjct: 41 tttttgaataaaacgaatgctcaaacatgt 12
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||||| |||||||||||||||||| || | ||||||||
Sbjct: 135 tttttgaacaagacgaatggtcaaacacgtgacaaaaagtc 175
>RF01062;MIR812;AACV01003478.1/15267-15096 39947:Oryza sativa
Japonica Group
Length = 172
Score = 127 bits (64), Expect = 8e-29
Identities = 126/144 (87%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 59 tttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagttg 118
|||||| |||||||||||| ||||| ||| | ||||||||||||||||| ||||||||||
Sbjct: 156 tttgaccattcgtcttattaaaaaaaattgcgtaattataatttattttgttatgagttg 97
Query: 119 ttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaa-atttt 177
|||||||||||| ||||||| ||| |||| |||| | |||| |||| |||||| |||||
Sbjct: 96 ttttatcactcaaagtacttgaagcatgatatata-tctatacatttacataaatatttt 38
Query: 178 tgaataagacgaatggtcaaacat 201
|||||| || ||||||||||||||
Sbjct: 37 tgaataggatgaatggtcaaacat 14
>RF01058;MIR806;CR855161.1/19052-18813 4530:Oryza sativa (rice)
Length = 240
Score = 127 bits (64), Expect = 8e-29
Identities = 198/240 (82%), Gaps = 2/240 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| ||||||||||||||||||||||||| |||| |||||| ||||||||||| |||
Sbjct: 1 atactacctccgttttttaatagatgacgccattgactttttctcacatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
|||||||||||||| ||| ||| |||| ||| |||| | || ||| |||||||||
Sbjct: 61 cgtcttattcaaaatatttaagtaaatatattttcttttgtcgtggtttgatttatcact 120
Query: 129 catagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacg 188
| | |||||||| ||| | ||||||| | ||||| || |||||||||||||||||
Sbjct: 121 aaatgaactttaagcatgactaatatttttaagatttgtatgaaatttttgaataagaca 180
Query: 189 aatggtcaaa-catgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|| ||||||| ||||| |||||||||||| ||||| |||||||||||||||||||||
Sbjct: 181 aacggtcaaaggttgtaa-caaaagtcaacggcgtcatatattaaaaaacggagggagta 239
Score = 115 bits (58), Expect = 3e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 175 ttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaa 234
||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||
Sbjct: 74 ttttgaataagacgaatggtcaaacatgtgagaaaaagtcaatggcgtcatctattaaaa 15
Query: 235 aacggagggagtat 248
|||||||| |||||
Sbjct: 14 aacggaggtagtat 1
Score = 63.9 bits (32), Expect = 1e-09
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttt 49
||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 239 tactccctccgttttttaatatatgacgccgttgactttt 200
>RF01062;MIR812;CR855151.1/21822-21652 4530:Oryza sativa (rice)
Length = 171
Score = 125 bits (63), Expect = 3e-28
Identities = 78/83 (93%)
Strand = Plus / Minus
Query: 132 agtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacgaat 191
||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||
Sbjct: 83 agtactttaagtgtgatttatatcttatacatttgcataaaatttttgaataaggcgaat 24
Query: 192 ggtcaaacatgtaagaaaaagtc 214
||||||||||| ||||||||||
Sbjct: 23 ggtcaaacatgcgagaaaaagtc 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 180 aataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||||||||||||||||||||| ||||||||||
Sbjct: 137 aataagacgaatggtcaaacatgtgagaaaaagtc 171
>RF01062;MIR812;AAAA02018035.1/12067-11892 39946:Oryza sativa Indica
Group
Length = 176
Score = 125 bits (63), Expect = 3e-28
Identities = 145/166 (87%), Gaps = 6/166 (3%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||| ||||||| ||||| |||| ||||||||||||||||| |||||
Sbjct: 165 acatgtttgaccattcatcttatttaaaaaatttacgtaattataatttattttgttatg 106
Query: 114 agttgttttatcactcatagtacttta-agtgtgatttatat--tttat-aaatt-tgca 168
||||||||||| |||||||||| |||| |||||||||||||| || || | ||| ||||
Sbjct: 105 agttgttttattactcatagtattttacagtgtgatttatatccttgatcatattctgca 46
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| ||||||||||| |||||||||||||||| ||||||||||
Sbjct: 45 gaaaaaatttgaataaga-gaatggtcaaacatgtgagaaaaagtc 1
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| ||||| ||||||| |||||||||||||||| ||||||||||
Sbjct: 131 taaattttttaaataagatgaatggtcaaacatgtgagaaaaagtc 176
>RF01062;MIR812;AP008207.1/22819547-22819377 39947:Oryza sativa
Japonica Group
Length = 171
Score = 125 bits (63), Expect = 3e-28
Identities = 119/135 (88%), Gaps = 2/135 (1%)
Strand = Plus / Minus
Query: 53 tacatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattat 112
|||| ||||||| |||||||||||||||||| |||| ||||||||||||||||| || |
Sbjct: 161 tacacgtttgaccattcgtcttattcaaaaaatttacgtaattataatttattttgttgt 102
Query: 113 gagttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaa 172
|||||||||||||||||| |||| |||||| ||||||||| | |||| |||| ||||||
Sbjct: 101 gagttgttttatcactcaaagtattttaagcatgatttata-tctatacatttacataaa 43
Query: 173 a-tttttgaataaga 186
| |||||||||||||
Sbjct: 42 attttttgaataaga 28
Score = 65.9 bits (33), Expect = 3e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagt 213
|||| |||||||||||||||||||||||||| ||||| |||||||
Sbjct: 126 taaattttttgaataagacgaatggtcaaacgtgtaataaaaagt 170
>RF01062;MIR812;AACV01006444.1/7164-7335 39947:Oryza sativa Japonica
Group
Length = 172
Score = 125 bits (63), Expect = 3e-28
Identities = 120/139 (86%)
Strand = Plus / Minus
Query: 66 attcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatc 125
|||||| ||||| ||||| ||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 149 attcgtgttattaaaaaaatttacataattacaatttattttattgtaagttgttttatc 90
Query: 126 actcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataag 185
||| | | |||||||| ||||| |||| |||| ||||||||||||||||| ||||||
Sbjct: 89 actaaaaatactttaaaaatgattcatatcttatgcatttgcataaaatttttaaataag 30
Query: 186 acgaatggtcaaacatgta 204
||||||| |||||||||||
Sbjct: 29 acgaatgatcaaacatgta 11
>RF01062;MIR812;AP008213.1/12999783-12999952 39947:Oryza sativa
Japonica Group
Length = 170
Score = 123 bits (62), Expect = 1e-27
Identities = 98/110 (89%)
Strand = Plus / Minus
Query: 89 cataattataatttattttattatgagttgttttatcactcatagtactttaagtgtgat 148
||||||||||||||||||| || ||||||||||||||||||| ||||||||||| | ||
Sbjct: 126 cataattataatttattttgttgtgagttgttttatcactcaaagtactttaagcataat 67
Query: 149 ttatattttataaatttgcataaaatttttgaataagacgaatggtcaaa 198
|||||| ||||| ||||| ||| ||||||| ||||| |||||||||||||
Sbjct: 66 ttatatcttatacatttgtatataattttttaataaaacgaatggtcaaa 17
>RF01062;MIR812;AAAA02007460.1/10896-11066 39946:Oryza sativa Indica
Group
Length = 171
Score = 123 bits (62), Expect = 1e-27
Identities = 120/138 (86%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 66 attcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatc 125
|||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||||| |
Sbjct: 148 attcgtcttattaaaaaa-attatgtaattataatttattttgttatgagttgttttacc 90
Query: 126 actcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataag 185
||||| |||| ||||| |||||||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 89 actcagagtattttaatcatgatttatatattatatatttgtataaaattttttaataag 30
Query: 186 acgaatggtcaaacatgt 203
| |||||| ||||||||
Sbjct: 29 ataaatggttaaacatgt 12
>RF01062;MIR812;AP008214.1/14100525-14100697 39947:Oryza sativa
Japonica Group
Length = 173
Score = 121 bits (61), Expect = 5e-27
Identities = 112/129 (86%)
Strand = Plus / Minus
Query: 59 tttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagttg 118
|||||| |||||||||||||||||| |||| |||||||||||| |||| || |||||||
Sbjct: 156 tttgaccattcgtcttattcaaaaaatttacgtaattataatttgttttgttgtgagttg 97
Query: 119 ttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaattttt 178
|||||||| ||| ||||||||||| ||| |||||| ||||| |||||| ||| |||||
Sbjct: 96 ttttatcattcaaagtactttaagcatgacttatatcttatacatttgcgtaatcttttt 37
Query: 179 gaataagac 187
|||||||||
Sbjct: 36 gaataagac 28
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaa 198
|||| |||||||||||||||||||||||||
Sbjct: 127 taaattttttgaataagacgaatggtcaaa 156
>RF01062;MIR812;AAAA02002252.1/26509-26338 39946:Oryza sativa Indica
Group
Length = 172
Score = 121 bits (61), Expect = 5e-27
Identities = 121/141 (85%)
Strand = Plus / Minus
Query: 59 tttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagttg 118
|||||| |||||||||||||||||| ||||||||||||| |||||||||||| || |||
Sbjct: 156 tttgaccattcgtcttattcaaaaaaattacataattatcatttattttattgcgaattg 97
Query: 119 ttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaattttt 178
|||||||||| | | ||||||||| |||||||||| | || ||||||| ||| |||||
Sbjct: 96 ttttatcactaaaaatactttaagcatgatttatatctaatgcatttgcacaaatttttt 37
Query: 179 gaataagacgaatggtcaaac 199
|||||||| |||||| ||||
Sbjct: 36 taataagacaaatggttaaac 16
Score = 50.1 bits (25), Expect = 2e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaa 198
|||||||||||||||||||||||||
Sbjct: 132 tttttgaataagacgaatggtcaaa 156
>RF01062;MIR812;AP008215.1/4933475-4933644 39947:Oryza sativa
Japonica Group
Length = 170
Score = 119 bits (60), Expect = 2e-26
Identities = 120/139 (86%), Gaps = 2/139 (1%)
Strand = Plus / Minus
Query: 66 attcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatc 125
|||| ||| ||||| ||| |||| ||||||||||||||||| ||| |||| |||||||
Sbjct: 147 attcatctcattcagaaaaattatgtaattataatttattttttta--agttattttatc 90
Query: 126 actcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataag 185
||| | | |||||||||| |||||||| | ||||| |||||| |||||||||||||||||
Sbjct: 89 acttaaattactttaagtatgatttatctcttatatatttgcgtaaaatttttgaataag 30
Query: 186 acgaatggtcaaacatgta 204
||||||| |||||||||||
Sbjct: 29 acgaatgatcaaacatgta 11
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 53 tacatgtttgacaattcgtcttattcaaaaa 83
||||||||||| ||||||||||||||||||
Sbjct: 11 tacatgtttgatcattcgtcttattcaaaaa 41
>RF01062;MIR812;AAAA02020950.1/6522-6354 39946:Oryza sativa Indica
Group
Length = 169
Score = 117 bits (59), Expect = 8e-26
Identities = 117/134 (87%), Gaps = 3/134 (2%)
Strand = Plus / Minus
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
|||||||| ||||| ||||||||||||||||| ||||| || ||| ||||||||||||||
Sbjct: 142 gtcttattaaaaaa-attacataattataattcattttgttgtgaattgttttatcactc 84
Query: 130 atagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataagacga 189
|||| ||||||| |||||||||| ||||| |||||||| | ||||| ||||||||||
Sbjct: 83 gaagtattttaagtatgatttatatcttatacatttgcat--atttttttaataagacga 26
Query: 190 atggtcaaacatgt 203
||| ||||||||||
Sbjct: 25 atgatcaaacatgt 12
>RF01062;MIR812;AP005838.3/136347-136177 39947:Oryza sativa Japonica
Group
Length = 171
Score = 117 bits (59), Expect = 8e-26
Identities = 120/139 (86%), Gaps = 1/139 (0%)
Strand = Plus / Minus
Query: 66 attcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatc 125
|||| ||||||| ||||| |||| |||||| |||||||||| || ||||||||||||||
Sbjct: 148 attcttcttattaaaaaa-attatgtaattacaatttattttgttgtgagttgttttatc 90
Query: 126 actcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataag 185
||||| ||| ||||||| | |||||||| ||||| ||||| ||||||||||| ||||||
Sbjct: 89 actcaaagtgttttaagtataatttatatcttatacatttgtataaaatttttaaataag 30
Query: 186 acgaatggtcaaacatgta 204
| ||||||||||||||||
Sbjct: 29 ataaatggtcaaacatgta 11
>RF01062;MIR812;AP008210.1/18334047-18334226 39947:Oryza sativa
Japonica Group
Length = 180
Score = 115 bits (58), Expect = 3e-25
Identities = 148/169 (87%), Gaps = 8/169 (4%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||| |
Sbjct: 169 acatgtttgaccattcgtcttattcaaaaaatttacgtaattataatttattttgttacg 110
Query: 114 ag-ttgttttatcactcat-agtactttaagtgtgattt-atattttataaattt-gcat 169
|| ||||||||||| |||| ||||||||| ||||||||| |||| ||||| |||| ||||
Sbjct: 109 agattgttttatcattcataagtactttaggtgtgatttaatatcttatacatttagcat 50
Query: 170 a--aaatttttgaataa-gacg-aatggtcaaacatgtaagaaaaagtc 214
| || ||||||||||| |||| ||||||||||||||| | ||||||||
Sbjct: 49 aacaattttttgaataacgacgcaatggtcaaacatgtgataaaaagtc 1
Score = 75.8 bits (38), Expect = 3e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 135 taaattttttgaataagacgaatggtcaaacatgtgagaaaaagtc 180
>RF01062;MIR812;AACV01002084.1/11736-11905 39947:Oryza sativa
Japonica Group
Length = 170
Score = 115 bits (58), Expect = 3e-25
Identities = 120/138 (86%), Gaps = 2/138 (1%)
Strand = Plus / Minus
Query: 66 attcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatc 125
|||||||||||| ||||| ||| ||||||||||||||||| || ||||||||||||||
Sbjct: 147 attcgtcttatttaaaaat-ttatgtaattataatttattttgttgtgagttgttttatc 89
Query: 126 actcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataag 185
||||| |||| |||||| |||||||| ||||| ||||||||||| |||||||||||
Sbjct: 88 actcaaagtattttaagcaatatttatatcttatacatttgcataaattttttgaataa- 30
Query: 186 acgaatggtcaaacatgt 203
|| |||||||||||||||
Sbjct: 29 acaaatggtcaaacatgt 12
>RF01058;MIR806;AAAA02028052.1/8526-8286 39946:Oryza sativa Indica
Group
Length = 241
Score = 115 bits (58), Expect = 3e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
|||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||
Sbjct: 167 tttttgaataagacgaatggtcaaacatgtgagaaaaagttaacggcgtcatctattaaa 226
Query: 234 aaacggagggagta 247
||||||||| ||||
Sbjct: 227 aaacggaggtagta 240
Score = 101 bits (51), Expect = 5e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| |||||||||||||||||||||||||||| | |||||| ||||||||||| ||||
Sbjct: 240 tactacctccgttttttaatagatgacgccgttaactttttctcacatgtttgaccattc 181
Query: 70 gtcttattcaaaaac 84
|||||||||||||||
Sbjct: 180 gtcttattcaaaaac 166
Score = 95.6 bits (48), Expect = 3e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||||||||| |||||||||| | || |||||||||| ||||||||
Sbjct: 80 taaattttttgaataagacgaacggtcaaacatatttaaagaagtcaacggcgtcatcta 21
Query: 229 ttaaaaaacggagggagtat 248
||||||||||||||||||||
Sbjct: 20 ttaaaaaacggagggagtat 1
Score = 85.7 bits (43), Expect = 3e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||||||||||||||||||||||| || || | ||||||||| ||
Sbjct: 1 atactccctccgttttttaatagatgacgccgttgacttctttaaatatgtttgaccgtt 60
Query: 69 cgtcttattcaaaaa 83
|||||||||||||||
Sbjct: 61 cgtcttattcaaaaa 75
>RF01062;MIR812;AAAA02010164.1/19624-19452 39946:Oryza sativa Indica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 121/141 (85%), Gaps = 1/141 (0%)
Strand = Plus / Minus
Query: 59 tttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagttg 118
|||||| |||||||||||| ||||| |||| ||| ||||||||||||| || |||||||
Sbjct: 157 tttgaccattcgtcttattaaaaaaaattatgtaactataatttattttgttgtgagttg 98
Query: 119 ttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaa-atttt 177
|||||| ||||| |||| |||||| |||||||||| ||||| |||| |||||| ||||
Sbjct: 97 ttttattactcaaagtattttaagcatgatttatatcttatacatttacataaatttttt 38
Query: 178 tgaataagacgaatggtcaaa 198
||||||||| ||||||||||
Sbjct: 37 tgaataagataaatggtcaaa 17
>RF01062;MIR812;AAAA02015063.1/20506-20337 39946:Oryza sativa Indica
Group
Length = 170
Score = 113 bits (57), Expect = 1e-24
Identities = 99/113 (87%)
Strand = Plus / Minus
Query: 91 taattataatttattttattatgagttgttttatcactcatagtactttaagtgtgattt 150
||||||||||||||||| || ||||||||||||||||||| | ||||||||| ||||||
Sbjct: 124 taattataatttattttgttgtgagttgttttatcactcaaaatactttaagcatgattt 65
Query: 151 atattttataaatttgcataaaatttttgaataagacgaatggtcaaacatgt 203
|||| ||||| ||||| |||| ||||| |||||||| |||| ||||||||||
Sbjct: 64 atatcttatatatttgtgtaaatttttttaataagacaaatgatcaaacatgt 12
>RF01062;MIR812;AP002482.1/104268-104097 39947:Oryza sativa Japonica
Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 135/161 (83%)
Strand = Plus / Minus
Query: 43 gattttttcgtacatgtttgacaattcgtcttattcaaaaacattacataattataattt 102
||||||||| ||| ||||||| |||| | ||||| |||| |||||||||||||||||
Sbjct: 172 gattttttctcacacgtttgaccattcattttatttaaaatatttacataattataattt 113
Query: 103 attttattatgagttgttttatcactcatagtactttaagtgtgatttatattttataaa 162
||||| || ||||||||||| ||||| | | | ||||| |||||||||| ||||| |
Sbjct: 112 attttgttgtgagttgttttctcacttaaattttattaagcatgatttatatcttataca 53
Query: 163 tttgcataaaatttttgaataagacgaatggtcaaacatgt 203
|||||||||||||||||||||||| ||||||| |||||||
Sbjct: 52 tttgcataaaatttttgaataagataaatggtcgaacatgt 12
>RF01058;MIR806;AAAA02008085.1/17196-17435 39946:Oryza sativa Indica
Group
Length = 240
Score = 111 bits (56), Expect = 5e-24
Identities = 201/243 (82%), Gaps = 6/243 (2%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||||||| ||||||| ||| ||| ||| ||||||| | | |||||| ||
Sbjct: 1 atactccctccgtattttaatgtatgccgctgttaattttttgagaaacgtttgatcttt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatca-c 127
|||||||||||||| |||| ||||||||||||||||||||||||| || ||||||| |
Sbjct: 61 tgtcttattcaaaaa-attatataattataatttattttattatgatttaatttatcatc 119
Query: 128 tcatagtactttaagtgtgattta--tattttataaatttgcataaaatttttgaataag 185
|||| | |||||||| |||| || |||||| || |||||||||||| |||||||||||
Sbjct: 120 acatatt-ctttaagtatgatataagtatttt-tatatttgcataaaaattttgaataag 177
Query: 186 acgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggag 245
|||| |||| |||| | | ||||||||||||| ||||| ||||||| ||||||||||
Sbjct: 178 acgagtggttaaacgttgattaaaaagtcaacggcgtcatacattaaaatacggagggag 237
Query: 246 tat 248
|||
Sbjct: 238 tat 240
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgatttttt 50
||||||||||||| ||||||| ||||||||||||| |||||
Sbjct: 240 atactccctccgtattttaatgtatgacgccgttgacttttt 199
>RF01062;MIR812;AACV01024510.1/6737-6907 39947:Oryza sativa Japonica
Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 97/111 (87%)
Strand = Plus / Minus
Query: 89 cataattataatttattttattatgagttgttttatcactcatagtactttaagtgtgat 148
|||| ||| |||||||||| || |||| |||| ||||||||| | |||||||||| ||||
Sbjct: 125 catagttacaatttattttgttgtgagatgttgtatcactcaaaatactttaagtatgat 66
Query: 149 ttatattttataaatttgcataaaatttttgaataagacgaatggtcaaac 199
|||||| ||||| |||| |||||| | ||||||||||||||||||||||||
Sbjct: 65 ttatatcttatacatttacataaagtgtttgaataagacgaatggtcaaac 15
>RF01062;MIR812;AACV01012565.1/5793-5961 39947:Oryza sativa Japonica
Group
Length = 169
Score = 107 bits (54), Expect = 8e-23
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
||||||||||| ||| |||||||| ||||| |||| ||||||||||||||||| |||||
Sbjct: 158 acatgtttgaccattagtcttattaaaaaaatttacgtaattataatttattttgttatg 99
Query: 114 agttgttttatcactcatagtacttt 139
||||||||||| ||||||||||||||
Sbjct: 98 agttgttttattactcatagtacttt 73
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| ||||| |||||||| ||||||||||||||| ||||||||||
Sbjct: 124 taaatttttttaataagactaatggtcaaacatgtgagaaaaagtc 169
>RF01062;MIR812;AAAA02035017.1/10631-10463 39946:Oryza sativa Indica
Group
Length = 169
Score = 107 bits (54), Expect = 8e-23
Identities = 119/139 (85%), Gaps = 5/139 (3%)
Strand = Plus / Minus
Query: 66 attcgtcttattcaaaaacatt-acataattataatttattttattatgagttgttttat 124
|||||||||||||||||| ||| || ||||||||| || |||| |||||||||||||
Sbjct: 146 attcgtcttattcaaaaatatttacgtaattataaatt----tattgtgagttgttttat 91
Query: 125 cactcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataa 184
||||| | ||||||||| |||||||||| ||||| |||| |||||||||||| |||||
Sbjct: 90 cactctaaatactttaagcatgatttatatcttatacatttacataaaatttttaaataa 31
Query: 185 gacgaatggtcaaacatgt 203
||| |||| ||||||||||
Sbjct: 30 gacaaatgatcaaacatgt 12
>RF01062;MIR812;AAAA02022081.1/19700-19533 39946:Oryza sativa Indica
Group
Length = 168
Score = 107 bits (54), Expect = 8e-23
Identities = 99/114 (86%)
Strand = Plus / Minus
Query: 91 taattataatttattttattatgagttgttttatcactcatagtactttaagtgtgattt 150
||||||| ||||||||| || | || |||||||||||||| ||||||||||| ||||||
Sbjct: 124 taattattatttattttgttgtcagatgttttatcactcaaagtactttaagcatgattt 65
Query: 151 atattttataaatttgcataaaatttttgaataagacgaatggtcaaacatgta 204
|||| |||| ||||||||||| |||| ||||||||||||| |||||||||||
Sbjct: 64 atatcctatacatttgcataaatttttagaataagacgaataatcaaacatgta 11
>RF01062;MIR812;AAAA02000584.1/15010-14838 39946:Oryza sativa Indica
Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 129/153 (84%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 53 tacatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattat 112
|||||||||||| |||| ||||||| ||| | |||| ||||||||||||||||| ||
Sbjct: 163 tacatgtttgaccattcatcttattaaaagaatttacgtaattataatttattttgttgc 104
Query: 113 gagttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataa- 171
|||||||| ||||||||| | || |||||| |||||||||| ||||| ||||||||||
Sbjct: 103 gagttgttgtatcactcaaaatattttaagcatgatttatatcttatacatttgcataat 44
Query: 172 aatttttgaataagacgaatggtcaaacatgta 204
||||||||||||| || | ||||||||||||
Sbjct: 43 tttttttgaataagatgagtagtcaaacatgta 11
Score = 52.0 bits (26), Expect = 4e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 180 aataagacgaatggtcaaacatgtaagaaaaagt 213
||||||| |||||||||||||||||| |||||||
Sbjct: 139 aataagatgaatggtcaaacatgtaataaaaagt 172
>RF01062;MIR812;AACV01014983.1/14519-14689 39947:Oryza sativa
Japonica Group
Length = 171
Score = 105 bits (53), Expect = 3e-22
Identities = 86/97 (88%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
||||||| |||||||||||||||||| ||| ||||||||||||||||| ||| |||||
Sbjct: 156 gtttgaccattcgtcttattcaaaaaatgtacgtaattataatttattttgttacgagtt 97
Query: 118 gttttatcactcatagtactttaagtgtgatttatat 154
||||||||||||| | ||||||||| ||||||||||
Sbjct: 96 gttttatcactcaaaatactttaagcatgatttatat 60
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||||||||||||||||||||||| || || ||||||||
Sbjct: 131 tttttgaataagacgaatggtcaaacgtgcaacaaaaagtc 171
>RF01062;MIR812;AACV01018234.1/2989-2814 39947:Oryza sativa Japonica
Group
Length = 176
Score = 101 bits (51), Expect = 5e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 52 gtacatgtttgacaattcgtcttattcaaaaacattacataattataatttattttatta 111
||||||||||||| |||||||||||||||||| ||| ||||||| |||||||| ||
Sbjct: 167 gtacatgtttgaccattcgtcttattcaaaaaatttatgtaattatcatttatttcgttg 108
Query: 112 tgagttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataa 171
||||||||||||||||| | |||| |||||| |||||||||| | || ||||||||||
Sbjct: 107 tgagttgttttatcactaaaagtattttaagcatgatttatatctcatgtatttgcataa 48
Query: 172 --aatttttgaataagacgaatggtcaaacatgt 203
|||||||||| ||| ||||| |||||||||
Sbjct: 47 tttttttttgaatatgacaaatggccaaacatgt 14
Score = 67.9 bits (34), Expect = 7e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgta 204
|||||| |||||||||||||||||||||||||||||||
Sbjct: 129 cataaattttttgaataagacgaatggtcaaacatgta 166
>RF01058;MIR806;AAAA02030603.1/128190-128430 39946:Oryza sativa
Indica Group
Length = 241
Score = 99.6 bits (50), Expect = 2e-20
Identities = 89/102 (87%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||||||| ||||||| |||||||||||||||||||| || | |||||||| ||
Sbjct: 1 atactccctccgtattttaatggatgacgccgttgattttttgataaacgtttgacattt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttatt 110
|||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 61 cgtcttattcaaaatatttatgtaattatcatttattttatt 102
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 175 ttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaa 234
|||||||||||||||| ||||||| | || ||||| ||||||| |||||| |||||||
Sbjct: 74 ttttgaataagacgaaatgtcaaacgtttatcaaaaaatcaacggcgtcatccattaaaa 15
Query: 235 aacggagggagtat 248
|||||||||||||
Sbjct: 14 tacggagggagtat 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgatttttt 50
||||||||||||| ||||||| ||||||||||||| |||||
Sbjct: 241 atactccctccgtattttaatgtatgacgccgttgacttttt 200
>RF01062;MIR812;AP008211.1/24016428-24016594 39947:Oryza sativa
Japonica Group
Length = 167
Score = 97.6 bits (49), Expect = 7e-20
Identities = 126/149 (84%), Gaps = 7/149 (4%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
|||| |||||| |||||||||||||||||| |||| |||||||| |||| || ||
Sbjct: 156 acatatttgaccattcgtcttattcaaaaaatttacgtaattata-----tttttttgtg 102
Query: 114 agttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcat-aaa 172
||||||||||||||||| ||||||||||| ||||||||| | ||| |||| ||| |||
Sbjct: 101 agttgttttatcactcaaagtactttaagcatgatttata-tctatccatttacataaaa 43
Query: 173 atttttgaataagacgaatggtcaaacat 201
| |||| ||||||||||||||||||||||
Sbjct: 42 aattttaaataagacgaatggtcaaacat 14
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||| ||||||||||||||||||||||||| |||| | ||||||||
Sbjct: 122 taaattttttgaataagacgaatggtcaaatatgtgataaaaagtc 167
>RF01062;MIR812;AAAA02033797.1/37042-37214 39946:Oryza sativa Indica
Group
Length = 173
Score = 91.7 bits (46), Expect = 5e-18
Identities = 124/145 (85%), Gaps = 5/145 (3%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
||||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||| ||
Sbjct: 158 gtttgacctttcgttttatttaaaaaatttatataattataatttattttattatgactt 99
Query: 118 gttttatcactcata-gtactttaagtgtgattta--tattttataaatttgcataaaat 174
| ||||||| ||| | || |||||||| ||| || |||||| || ||||||||||||
Sbjct: 98 gatttatca-tcaaatgttctttaagtatgacataagtatttt-tatatttgcataaaaa 41
Query: 175 ttttgaataagacgaatggtcaaac 199
|||||||||||||||||||||||||
Sbjct: 40 ttttgaataagacgaatggtcaaac 16
>RF01062;MIR812;AAAA02017076.1/14303-14473 39946:Oryza sativa Indica
Group
Length = 171
Score = 91.7 bits (46), Expect = 5e-18
Identities = 122/146 (83%), Gaps = 1/146 (0%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
||||||| |||||| ||||| ||||| |||| |||||||||||||||| || ||||||
Sbjct: 156 gtttgaccattcgttttatttaaaaa-attatggaattataatttatttttttgtgagtt 98
Query: 118 gttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaatttt 177
||||||||||| | | || |||||| |||||||||| ||||| | || | ||||| |||
Sbjct: 97 gttttatcacttaaaatattttaagcatgatttatatattatataatttcctaaaaattt 38
Query: 178 tgaataagacgaatggtcaaacatgt 203
|||||||| ||||| ||||||||||
Sbjct: 37 tgaataaggcgaataatcaaacatgt 12
>RF01062;MIR812;AL731751.4/18047-18218 4530:Oryza sativa (rice)
Length = 172
Score = 91.7 bits (46), Expect = 5e-18
Identities = 121/146 (82%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
||||||| |||||||||||||||||| ||| |||||| ||||||||| || ||||||
Sbjct: 158 gtttgaccattcgtcttattcaaaaaatttatgcaattatcatttattttgttgtgagtt 99
Query: 118 gttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaatttt 177
||||||||||| | | || || ||| | |||||||| | || ||||||||||| ||
Sbjct: 98 gttttatcactaaaaatatttaaagcattatttatatctcatgtatttgcataaacattg 39
Query: 178 tgaataagacgaatggtcaaacatgt 203
||||||||||||||||||||| ||||
Sbjct: 38 tgaataagacgaatggtcaaatatgt 13
Score = 63.9 bits (32), Expect = 1e-09
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 164 ttgcataaaatttttgaataagacgaatggtcaaac 199
||||||||| ||||||||||||||||||||||||||
Sbjct: 123 ttgcataaattttttgaataagacgaatggtcaaac 158
>RF01058;MIR806;AAAA02005666.1/25598-25367 39946:Oryza sativa Indica
Group
Length = 232
Score = 91.7 bits (46), Expect = 5e-18
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 162 atttgcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtg 221
|||||||||||| ||||||||||||||| ||||||||| | | |||||||||||||||
Sbjct: 146 atttgcataaaaattttgaataagacgagtggtcaaacgttgattaaaaagtcaacggtg 205
Query: 222 tcatctattaaaaaacggagggagta 247
|||| ||||||| ||||||||||||
Sbjct: 206 tcatacattaaaatacggagggagta 231
Score = 67.9 bits (34), Expect = 7e-11
Identities = 79/94 (84%)
Strand = Plus / Plus
Query: 17 tccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttat 76
||||| ||||||| ||||||||||||| ||||| | | |||||| ||||||||||
Sbjct: 17 tccgtattttaatgtatgacgccgttgactttttaacaaacgtttgatctttcgtcttat 76
Query: 77 tcaaaaacattacataattataatttattttatt 110
||||||| ||| |||||||||||||||||||||
Sbjct: 77 tcaaaaaatttatataattataatttattttatt 110
Score = 50.1 bits (25), Expect = 2e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 168 ataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatct 227
||||| ||||||||||||||||| | |||||| | | ||||||||||||| |||||
Sbjct: 89 ataaattttttgaataagacgaaagatcaaacgtttgttaaaaagtcaacggcgtcatac 30
Query: 228 attaaaaaacgga 240
||||||| |||||
Sbjct: 29 attaaaatacgga 17
Score = 50.1 bits (25), Expect = 2e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||| ||||||| ||||| ||||||| ||||| | | ||||||| | ||
Sbjct: 231 tactccctccgtattttaatgtatgacaccgttgactttttaatcaacgtttgaccactc 172
Query: 70 gtcttattcaaaa 82
|||||||||||||
Sbjct: 171 gtcttattcaaaa 159
>RF01062;MIR812;AAAA02021951.1/25157-25330 39946:Oryza sativa Indica
Group
Length = 174
Score = 89.7 bits (45), Expect = 2e-17
Identities = 75/85 (88%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
||||||| |||||||||||||||||| ||| |||||||||||||||||||| |||| |
Sbjct: 159 gtttgaccattcgtcttattcaaaaaatttatgtaattataatttattttattgtgaggt 100
Query: 118 gttttatcactcatagtactttaag 142
|||||||||||| | |||||||||
Sbjct: 99 tttttatcactcaaaatactttaag 75
Score = 63.9 bits (32), Expect = 1e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
|||||| |||||||||||||||||||||||||| ||| | ||||||||
Sbjct: 127 cataaattttttgaataagacgaatggtcaaacgtgtgataaaaagtc 174
>RF01062;MIR812;AP005156.4/10500-10672 39947:Oryza sativa Japonica
Group
Length = 173
Score = 89.7 bits (45), Expect = 2e-17
Identities = 117/136 (86%), Gaps = 5/136 (3%)
Strand = Plus / Minus
Query: 67 ttcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatca 126
|||||||||||||||||| ||| ||||||||||||||||||||| ||| ||| |||||||
Sbjct: 149 ttcgtcttattcaaaaactttatataattataatttattttattgtgacttgatttatca 90
Query: 127 ctcata-gtactttaagtgtgattta--tattttataaatttgcataaaatttttgaata 183
||| | || ||||||| |||| || |||||| || ||||||||||||||||| ||||
Sbjct: 89 -tcaaatgttctttaagcatgatataagtatttt-tatatttgcataaaatttttaaata 32
Query: 184 agacgaatggtcaaac 199
|||||| | |||||||
Sbjct: 31 agacgagttgtcaaac 16
>RF01058;MIR806;AACV01007258.1/13217-12976 39947:Oryza sativa
Japonica Group
Length = 242
Score = 89.7 bits (45), Expect = 2e-17
Identities = 161/195 (82%), Gaps = 6/195 (3%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||||||| ||||||| ||||||||||||| ||||| | | |||||| ||
Sbjct: 1 atactccctccgtattttaatgtatgacgccgttgacttttttacaaacgtttgatcttt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatcact 128
||| ||||||||||| ||| |||||||||||||||||||| ||| ||| ||||||| |
Sbjct: 61 cgtgttattcaaaaaatttatgtaattataatttattttattgtgacttgatttatca-t 119
Query: 129 cata--gtactttaagtgtgattta--tattttataaatttgcataaaatttttgaataa 184
|| | || |||||| |||| || |||||| || |||||||||||||||||||||||
Sbjct: 120 caaaatgttatttaagcatgatataagtatttt-tatatttgcataaaatttttgaataa 178
Query: 185 gacgaatggtcaaac 199
||||| |||||||||
Sbjct: 179 gacgagtggtcaaac 193
Score = 60.0 bits (30), Expect = 2e-08
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatc 226
|||||| ||||||||||| ||||| | |||||| | | ||||||||||||| |||||
Sbjct: 82 cataaattttttgaataacacgaaagatcaaacgtttgtaaaaaagtcaacggcgtcata 23
Query: 227 tattaaaaaacggagggagtat 248
||||||| |||||||||||||
Sbjct: 22 cattaaaatacggagggagtat 1
>RF01062;MIR812;AACV01009417.1/2453-2615 39947:Oryza sativa Japonica
Group
Length = 163
Score = 87.7 bits (44), Expect = 7e-17
Identities = 121/146 (82%), Gaps = 8/146 (5%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
||||||| ||| |||||||||||| | | ||||||||||||||||||| || |||||
Sbjct: 149 gtttgaccatttgtcttattcaaacatttctcataattataatttattttgttgtgagtc 90
Query: 118 gttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaatttt 177
|||| |||||||| ||||||| ||||||||| ||||| ||||| ||||||||||
Sbjct: 89 gttt-atcactcaaagtactt-------gatttatatcttatacatttgtataaaatttt 38
Query: 178 tgaataagacgaatggtcaaacatgt 203
| | ||||||||||||||||| ||||
Sbjct: 37 ttagtaagacgaatggtcaaatatgt 12
>RF01062;MIR812;AL935066.2/65797-65626 4530:Oryza sativa (rice)
Length = 172
Score = 87.7 bits (44), Expect = 7e-17
Identities = 124/148 (83%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
||||||| |||||| |||||||||| |||| |||||| ||||||||||||| | ||||
Sbjct: 157 gtttgaccattcgttttattcaaaatt-ttacgtaattacaatttattttattgtaagtt 99
Query: 118 gttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaa-attt 176
||||||| ||| | |||||||||||| | |||||||| ||| |||||||||| |||
Sbjct: 98 gttttattactaaaagtactttaagtataatttatatcctatgcttttgcataaattttt 39
Query: 177 ttgaataagacgaatggtcaaacatgta 204
|| ||||| || ||||||||||||||||
Sbjct: 38 tttaataaaacaaatggtcaaacatgta 11
>RF01058;MIR806;AP008208.1/19187919-19187677 39947:Oryza sativa
Japonica Group
Length = 243
Score = 87.7 bits (44), Expect = 7e-17
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||||||||||| ||||||||||| |||||||||||||||||| ||
Sbjct: 80 taaattttttgaataagacgaatgatcaaacatgtattaaaaagtcaacggtgtcaaata 21
Query: 229 ttaaaaaacggagggagtat 248
|| |||||||||||||||
Sbjct: 20 ttttgaaacggagggagtat 1
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||||||||| |||| |||| ||||||| ||||| ||||||||||| |||
Sbjct: 1 atactccctccgtttcaaaatatttgacaccgttgactttttaatacatgtttgatcatt 60
Query: 69 cgtcttattcaaaaa 83
|||||||||||||||
Sbjct: 61 cgtcttattcaaaaa 75
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgt 203
|||||||||||||| || ||||||||||||
Sbjct: 167 tttttgaataagacaaacggtcaaacatgt 196
>RF01062;MIR812;AP003571.4/139876-140044 39947:Oryza sativa Japonica
Group
Length = 169
Score = 85.7 bits (43), Expect = 3e-16
Identities = 122/146 (83%), Gaps = 3/146 (2%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
||||||| ||| || ||||| ||||| ||| |||||| |||||||||| || || ||
Sbjct: 154 gtttgaccattagttttatttaaaaattttatgtaattacaatttattttgttgtg--tt 97
Query: 118 gttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaatttt 177
||||||||||| ||| || ||||||| |||||||||| |||| |||| ||||| ||||
Sbjct: 96 gttttatcactaataatagtttaagtatgatttatatcttatgcatttacataatttttt 37
Query: 178 tgaataagacgaatggtcaaacatgt 203
| ||||||||||||||||||||||||
Sbjct: 36 t-aataagacgaatggtcaaacatgt 12
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
||||||||||| |||||||||||| |||||
Sbjct: 12 acatgtttgaccattcgtcttattaaaaaa 41
>RF01058;MIR806;AC120527.3/102892-102654 39947:Oryza sativa Japonica
Group
Length = 239
Score = 85.7 bits (43), Expect = 3e-16
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 162 atttgcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtg 221
|||||||||||| |||| |||||||||||||||||||| | |||||||||||||||
Sbjct: 153 atttgcataaaaattttaaataagacgaatggtcaaacgttgtttaaaaagtcaacggtg 212
Query: 222 tcatctattaaaaaacggagggagtat 248
|||| |||||||| ||| |||||||||
Sbjct: 213 tcatatattaaaatacgaagggagtat 239
>RF01058;MIR806;AP008207.1/29466463-29466702 39947:Oryza sativa
Japonica Group
Length = 240
Score = 85.7 bits (43), Expect = 3e-16
Identities = 188/231 (81%), Gaps = 4/231 (1%)
Strand = Plus / Plus
Query: 16 ctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtctta 75
|||||| ||||||| ||||||||||||| ||||| | ||||||||| |||| |||||
Sbjct: 8 ctccgtattttaatgtatgacgccgttgactttttatttaatgtttgaccattcatctta 67
Query: 76 ttcaaaaacattacataattataatttattttattatgagttgttttatcactcata-gt 134
|||||||| | || |||||||| |||||||||||| || ||| || |||| ||| | ||
Sbjct: 68 ttcaaaaata-tatataattattatttattttattgtgccttgattcatca-tcaaatgt 125
Query: 135 actttaagtgtgatttatat-tttataaatttgcataaaatttttgaataagacgaatgg 193
||||||| |||| || || ||| || ||||||| |||| |||||||||| ||||||||
Sbjct: 126 tctttaagcatgatataaatatttttatatttgcacaaaaattttgaataaaacgaatgg 185
Query: 194 tcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggaggga 244
|||||| | | ||||||||||||| ||||| ||||||| | |||||||
Sbjct: 186 tcaaacgtttgttaaaaagtcaacggcgtcatacattaaaatatggaggga 236
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 173 atttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaa 232
|||||||||||||| |||||||||||||| || ||||||||||||| ||||| |||||
Sbjct: 76 atttttgaataagatgaatggtcaaacattaaataaaaagtcaacggcgtcatacattaa 17
Query: 233 aaaacggag 241
|| ||||||
Sbjct: 16 aatacggag 8
Score = 44.1 bits (22), Expect = 0.001
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 13 tccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtc 72
||||||| | ||||||| ||||||||||||| ||||| | | ||||||| ||||||
Sbjct: 236 tccctccatattttaatgtatgacgccgttgactttttaacaaacgtttgaccattcgtt 177
Query: 73 ttattcaaaa 82
||||||||||
Sbjct: 176 ttattcaaaa 167
>RF01062;MIR812;AAAA02003743.1/6371-6539 39946:Oryza sativa Indica
Group
Length = 169
Score = 83.8 bits (42), Expect = 1e-15
Identities = 120/141 (85%), Gaps = 5/141 (3%)
Strand = Plus / Minus
Query: 59 tttgacaattcgtcttattcaaaaacatt-acataattataatttattttattatgagtt 117
|||||| |||||||||||| ||||| ||| || |||||||||||||||| |||||||||
Sbjct: 153 tttgaccattcgtcttatttaaaaaaatttacgtaattataatttatttg-ttatgagtt 95
Query: 118 gttttatcactcatagtactttaagtgtgatttatattttataaatttgcataaaatttt 177
|||||||||||| | ||||||||| |||||||||| | ||| |||| |||| ||||
Sbjct: 94 attttatcactcaaactactttaagcatgatttatatct-atatatttacatat--tttt 38
Query: 178 tgaataagacgaatggtcaaa 198
| ||||||||||||| |||||
Sbjct: 37 ttaataagacgaatgatcaaa 17
Score = 50.1 bits (25), Expect = 2e-05
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtc 214
||||| ||||||||||||||||||| ||||| ||||||||
Sbjct: 129 tttttaaataagacgaatggtcaaatgtgtaataaaaagtc 169
>RF01062;MIR812;AAAA02041948.1/2219-2054 39946:Oryza sativa Indica
Group
Length = 166
Score = 83.8 bits (42), Expect = 1e-15
Identities = 123/145 (84%), Gaps = 5/145 (3%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
||||||| ||||||||||||||||| ||| |||||||||||||||||||| ||| ||
Sbjct: 156 gtttgacttttcgtcttattcaaaaaatttatgtaattataatttattttattgtgactt 97
Query: 118 gttttatcactcata-gtactttaagtgtgattta--tattttataaatttgcataaaat 174
| ||||||| ||| | || ||||||| ||| || |||||| || |||||||||||||
Sbjct: 96 gatttatca-tcaaatgttctttaagcatgacataagtatttt-tatatttgcataaaat 39
Query: 175 ttttgaataagacgaatggtcaaac 199
||||||||||||||| |||||||||
Sbjct: 38 ttttgaataagacgagtggtcaaac 14
>RF01058;MIR806;AACV01000531.1/1711-1951 39947:Oryza sativa Japonica
Group
Length = 241
Score = 83.8 bits (42), Expect = 1e-15
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 162 atttgcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtg 221
||||| ||||||||||| |||||||||| ||||||||| | || |||||||||||||||
Sbjct: 155 atttgtataaaatttttaaataagacgagtggtcaaacgtttattaaaaagtcaacggtg 214
Query: 222 tcatctattaaaaaacggagggagta 247
|||| ||||||| |||||| |||||
Sbjct: 215 tcatacattaaaatacggagagagta 240
Score = 44.1 bits (22), Expect = 0.001
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 207 aaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
||||||||||||| ||||| ||||||| ||||||||||||
Sbjct: 42 aaaaagtcaacggcgtcatacattaaaatgcggagggagtat 1
>RF01058;MIR806;AC133860.5/76754-76494 39947:Oryza sativa Japonica
Group
Length = 261
Score = 83.8 bits (42), Expect = 1e-15
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatc 226
|||||| ||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 180 cataaattttttgaataagacgaatggtcaaacacgtgctaaaaagtcaacggtgtcaaa 239
Query: 227 tattaaaaaacggagggagtat 248
||| ||||||||||||||||
Sbjct: 240 cattttaaaacggagggagtat 261
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||| ||| |||| ||||||| ||||| | || |||||||| |||
Sbjct: 261 atactccctccgttttaaaatgtttgacaccgttgactttttagcacgtgtttgaccatt 202
Query: 69 cgtcttattcaaaaa 83
|||||||||||||||
Sbjct: 201 cgtcttattcaaaaa 187
>RF01058;MIR806;AAAA02004860.1/16027-16266 39946:Oryza sativa Indica
Group
Length = 240
Score = 83.8 bits (42), Expect = 1e-15
Identities = 100/118 (84%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| ||||| | ||||||| ||||||||||||| ||||| | | |||||| |||
Sbjct: 1 atactacctccatattttaatgtatgacgccgttgactttttttca-acgtttgatcatt 59
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatca 126
||||||||||||||| ||| ||||||||||||||||||||||||| ||| |||||||
Sbjct: 60 cgtcttattcaaaaagtttatataattataatttattttattatgacttgatttatca 117
Score = 58.0 bits (29), Expect = 6e-08
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 168 ataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatct 227
||||| ||||||||||||||||||| |||||| | | | ||||||||||||| |||||
Sbjct: 80 ataaactttttgaataagacgaatgatcaaacgt-tgaaaaaaagtcaacggcgtcatac 22
Query: 228 attaaaaaacggagggagtat 248
||||||| | ||||| |||||
Sbjct: 21 attaaaatatggaggtagtat 1
>RF01058;MIR806;AACV01012792.1/736-976 39947:Oryza sativa Japonica
Group
Length = 241
Score = 83.8 bits (42), Expect = 1e-15
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 168 ataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatct 227
||||| ||||| |||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 161 ataaatttttttaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaat 220
Query: 228 attaaaaaacggagggag 245
||| | ||||||||||||
Sbjct: 221 atttagaaacggagggag 238
Score = 63.9 bits (32), Expect = 1e-09
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 12 ctccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgt 71
|||||||||||| | |||| |||| ||||||| ||||| | ||||||||||| ||||||
Sbjct: 238 ctccctccgtttctaaatatttgacaccgttgactttttagcacatgtttgaccattcgt 179
Query: 72 cttattcaaaaa 83
|||||| |||||
Sbjct: 178 cttattaaaaaa 167
Score = 46.1 bits (23), Expect = 2e-04
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||||| | |||| ||||| | |||||||||| | ||||||||| |||
Sbjct: 2 tactccctccgtttctaaatatttgacgtcattgattttttaaaatatgtttgaccgttc 61
Query: 70 gtcttattcaaaaacatta 88
|||||||| ||||| ||||
Sbjct: 62 gtcttatttaaaaaaatta 80
>RF01062;MIR812;AAAA02021063.1/25310-25482 39946:Oryza sativa Indica
Group
Length = 173
Score = 81.8 bits (41), Expect = 4e-15
Identities = 113/136 (83%), Gaps = 2/136 (1%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaacattacataattataatttattttattatg 113
|||||||| || ||| ||||| ||||||| |||| |||||| ||||||||| |||||
Sbjct: 162 acatgtttcaccatttgtcttgttcaaaatatttacctaattaccatttattttgttatg 103
Query: 114 agttgttttatcactcata--gtactttaagtgtgatttatattttataaatttgcataa 171
||||||||||||||| | | |||||||||| | | |||||| |||| ||||||| ||
Sbjct: 102 agttgttttatcactaaaagtgtactttaagcataacttatatcttatgcatttgcacaa 43
Query: 172 aatttttgaataagac 187
||||||||||||||||
Sbjct: 42 aatttttgaataagac 27
>RF01062;MIR812;AP004769.3/6185-6014 39947:Oryza sativa Japonica
Group
Length = 172
Score = 81.8 bits (41), Expect = 4e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 66 attcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatc 125
|||||||||||||||||| ||| ||||||||||||||||||||||||| ||| ||||||
Sbjct: 150 attcgtcttattcaaaaagtttatataattataatttattttattatgacttgatttatc 91
Query: 126 a 126
|
Sbjct: 90 a 90
Score = 48.1 bits (24), Expect = 6e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 168 ataaaatttttgaataagacgaatggtcaaac 199
||||| ||||||||||||||||||| ||||||
Sbjct: 127 ataaactttttgaataagacgaatgatcaaac 158
>RF01058;MIR806;AAAA02032881.1/486-247 39946:Oryza sativa Indica
Group
Length = 240
Score = 81.8 bits (41), Expect = 4e-15
Identities = 195/241 (80%), Gaps = 4/241 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| ||||||||||||||| ||||||| ||||| ||||| | ||||||| |||
Sbjct: 1 atactacctccgttttttaatgtatgacgctgttgactttttgtctaacgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatca-c 127
||||||||||||||| |||| ||||||| |||||||||||| ||| ||| ||| ||| |
Sbjct: 61 cgtcttattcaaaaa-attatgtaattatcatttattttattgtgacttgatttgtcatc 119
Query: 128 tcatagtactttaagtgtgatttatat-tttataaatttgcataaaatttttgaataaga 186
|| | ||||||| |||| || || ||| || |||||||||||| ||||||||| |
Sbjct: 120 aaatgtttttttaagtatgatataaatatttttatatttgcataaaa-atttgaataaaa 178
Query: 187 cgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagt 246
||||||||||||| | | |||||||||||| ||||| ||||||| |||||||||||
Sbjct: 179 cgaatggtcaaacgttgatcgaaaagtcaacggcgtcatacattaaaatacggagggagt 238
Query: 247 a 247
|
Sbjct: 239 a 239
Score = 69.9 bits (35), Expect = 2e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
|||||||||||||||||||||||||| | | ||||||||||| | ||||| ||||||
Sbjct: 75 tttttgaataagacgaatggtcaaacgttagacaaaaagtcaacagcgtcatacattaaa 16
Query: 234 aaacggagggagtat 248
||||||||| |||||
Sbjct: 15 aaacggaggtagtat 1
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttt 49
|||||||||||| ||||||| ||||||||||||| ||||
Sbjct: 239 tactccctccgtattttaatgtatgacgccgttgactttt 200
>RF01058;MIR806;AACV01013120.1/28194-28434 39947:Oryza sativa
Japonica Group
Length = 241
Score = 81.8 bits (41), Expect = 4e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 171 aaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctatt 230
|||||||| ||||||||||||||||||||||||| |||||||||||||| ||| ||||
Sbjct: 78 aaattttttaataagacgaatggtcaaacatgtactaaaaagtcaacggtatcaaatatt 19
Query: 231 aaaaaacggagggagta 247
||||||||||||||
Sbjct: 18 ttgaaacggagggagta 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 38 ccgttgattttttcgtacatgtttgacaattcgtcttattcaaaaa 83
||||||| ||||| ||||||||||||| |||||||||||| |||||
Sbjct: 30 ccgttgactttttagtacatgtttgaccattcgtcttattaaaaaa 75
>RF01058;MIR806;AC136228.2/107628-107389 39947:Oryza sativa Japonica
Group
Length = 240
Score = 81.8 bits (41), Expect = 4e-15
Identities = 193/240 (80%), Gaps = 4/240 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
||||| |||| | |||||||| ||||||||||| | ||||| | |||||||||| |||
Sbjct: 2 tactctctccatattttaatatatgacgccgttaactttttaacaaatgtttgacatttc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatcactc 129
|||||| ||||||| |||| || |||||||||| ||||||| ||| ||| |||||||
Sbjct: 62 gtcttactcaaaaaaattatatgattataattt-ttttattgtgacttgatttatcagca 120
Query: 130 atagtactttaagtgtgattta--tattttataaatttgcataaaatttttgaataagac 187
| || ||||||| ||| || |||||| || |||||||||||| |||||||||||||
Sbjct: 121 aatgttctttaagcatgacataagtatttt-tatatttgcataaaaattttgaataagac 179
Query: 188 gaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|| || |||||| | ||||| ||||||| ||||| |||||||| | ||||||||||
Sbjct: 180 gagtgatcaaacgttggttaaaaaatcaacggcgtcatatattaaaatatggagggagta 239
Score = 58.0 bits (29), Expect = 6e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgatttttt 50
|||||||||| | |||||||| |||||||||||||||||||
Sbjct: 239 tactccctccatattttaatatatgacgccgttgatttttt 199
>RF01058;MIR806;AAAA02034880.1/6219-6459 39946:Oryza sativa Indica
Group
Length = 241
Score = 81.8 bits (41), Expect = 4e-15
Identities = 98/117 (83%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||| |||||||| ||||||| ||||| ||||| | | ||||||| |||
Sbjct: 2 tactccctccgtattttaatatatgacgcagttgactttttgacaaacgtttgacctttc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatca 126
| ||||||||||| |||| |||||||| |||||||||||| ||| ||| |||||||
Sbjct: 62 atattattcaaaaaaattatataattatcatttattttattgtgacttgatttatca 118
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
||||||||||| | ||| |||||||| | | ||||||||||| | ||||| |||||||
Sbjct: 75 tttttgaataatatgaaaggtcaaacgtttgtcaaaaagtcaactgcgtcatatattaaa 16
Query: 234 aaacggagggagta 247
| ||||||||||||
Sbjct: 15 atacggagggagta 2
>RF01058;MIR806;AACV01015483.1/3474-3710 39947:Oryza sativa Japonica
Group
Length = 237
Score = 81.8 bits (41), Expect = 4e-15
Identities = 185/228 (81%), Gaps = 5/228 (2%)
Strand = Plus / Plus
Query: 24 tttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaaaaa 83
||||||| ||||||||||||||||||| || | ||||||| |||||||||||||||||
Sbjct: 12 tttaatatatgacgccgttgattttttaataaacgtttgacctttcgtcttattcaaaaa 71
Query: 84 cattacataattataatttattttattatgagttgttttatca-ctcatagtactttaag 142
||| ||||||| |||||||||| | ||| ||| ||||||| || || || |||| ||
Sbjct: 72 atttatgtaattatcatttattttactgtgacttgatttatcatctaat-gttctttgag 130
Query: 143 tgtgattta--tattttataaatttgcataaaatttttgaataagacgaatggtcaaaca 200
|||| || |||||| | |||||||||||| ||||||||||||||||||||||||
Sbjct: 131 catgatataagtatttt-tgtatttgcataaaaaatttgaataagacgaatggtcaaacg 189
Query: 201 tgtaagaaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
| ||||||||||||| ||||| ||||||| || || |||||||
Sbjct: 190 ttagttaaaaagtcaacggcgtcatacattaaaatacagatggagtat 237
Score = 61.9 bits (31), Expect = 4e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatc 226
|||||| ||||||||||||||||| |||||||| | || ||||| ||||||| |||||
Sbjct: 78 cataaattttttgaataagacgaaaggtcaaacgtttattaaaaaatcaacggcgtcata 19
Query: 227 tattaaa 233
|||||||
Sbjct: 18 tattaaa 12
>RF01058;MIR806;AP008215.1/4511892-4511652 39947:Oryza sativa
Japonica Group
Length = 241
Score = 81.8 bits (41), Expect = 4e-15
Identities = 98/117 (83%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||| | ||||||| ||||||||||||| ||||| | | ||||||| |||
Sbjct: 2 tactccctccatattttaatgtatgacgccgttgactttttgacaaacgtttgacctttc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatgagttgttttatca 126
|||||||||||||| ||| |||||||||||||||||||| ||| ||| |||||||
Sbjct: 62 gtcttattcaaaaaatttatgtaattataatttattttattgtgacttgatttatca 118
Score = 65.9 bits (33), Expect = 3e-10
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatc 226
|||||| ||||||||||||||||| |||||||| | | ||||||||||||| |||||
Sbjct: 82 cataaattttttgaataagacgaaaggtcaaacgtttgtcaaaaagtcaacggcgtcata 23
Query: 227 tattaaaaaacggagggagta 247
||||||| | ||||||||||
Sbjct: 22 cattaaaatatggagggagta 2
Score = 48.1 bits (24), Expect = 6e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgatttt 48
||||||||||||| ||||||| ||||| |||||||||||
Sbjct: 241 atactccctccgtattttaatgtatgacaccgttgatttt 202
>RF01062;MIR812;AP008214.1/13935585-13935748 39947:Oryza sativa
Japonica Group
Length = 164
Score = 79.8 bits (40), Expect = 2e-14
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 112 tgagttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataa 171
||||||||||||||||| | | |||||| || |||||||||| ||||| ||||||||||
Sbjct: 103 tgagttgttttatcacttaaaatacttttagcatgatttatatcttatagatttgcataa 44
Query: 172 aatttttgaataagacgaatggtcaaacatgt 203
| ||||| ||||||| ||| |||||||||||
Sbjct: 43 attttttaaataagataaatagtcaaacatgt 12
>RF01062;MIR812;AL954826.3/119380-119216 4530:Oryza sativa (rice)
Length = 165
Score = 79.8 bits (40), Expect = 2e-14
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 112 tgagttgttttatcactcatagtactttaagtgtgatttatattttataaatttgcataa 171
||||||||||||||| | | |||| |||||| ||||||||| |||| ||||||||||
Sbjct: 103 tgagttgttttatcagtaaaagtattttaagcaggatttatatcttatgcatttgcataa 44
Query: 172 aatttttgaataagacgaatggtcaaacatgt 203
|||||||| ||||||| |||| ||||||||||
Sbjct: 43 aatttttgcataagacaaatgatcaaacatgt 12
>RF01062;MIR812;AACV01030556.1/490-318 39947:Oryza sativa Japonica
Group
Length = 173
Score = 79.8 bits (40), Expect = 2e-14
Identities = 118/140 (84%), Gaps = 3/140 (2%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
||||||| |||||||||||| ||||| ||| |||||||| |||||||||||| ||| ||
Sbjct: 158 gtttgactattcgtcttatttaaaaaatttatataattattatttattttattgtgactt 99
Query: 118 gttttatcactcata-gtactttaagtgtgatttatat-tttataaatttgcataaaatt 175
| ||||||| ||| | || ||||||| |||| || || ||| | ||||||||||||||
Sbjct: 98 gatttatca-tcaaatgttctttaagcatgatataaatattttcatatttgcataaaatt 40
Query: 176 tttgaataagacgaatggtc 195
||||||||| ||||||||||
Sbjct: 39 tttgaataaaacgaatggtc 20
>RF01058;MIR806;AAAA02025638.1/10645-10403 39946:Oryza sativa Indica
Group
Length = 243
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtca 224
|||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 80 taaattttttgaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtca 25
Score = 61.9 bits (31), Expect = 4e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 33 tgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaaaaa 83
|||| ||||||| ||||| |||| |||||||| ||||||||||||||||||
Sbjct: 25 tgacaccgttgactttttagtacgtgtttgaccattcgtcttattcaaaaa 75
>RF01058;MIR806;AACV01022518.1/19044-18804 39947:Oryza sativa
Japonica Group
Length = 241
Score = 79.8 bits (40), Expect = 2e-14
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 168 ataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatct 227
||||||||||||||||| ||| ||||||| || | | |||||||||||||| ||||| |
Sbjct: 161 ataaaatttttgaataaaacggatggtcatacgttgatgaaaaagtcaacggcgtcatat 220
Query: 228 attaaaaaacggagggagta 247
||||||| ||||||||||||
Sbjct: 221 attaaaatacggagggagta 240
Score = 60.0 bits (30), Expect = 2e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttc 51
|||||||||||| |||||||| ||||||||||||| ||||||
Sbjct: 240 tactccctccgtattttaatatatgacgccgttgactttttc 199
>RF01058;MIR806;AAAA02019509.1/23201-23434 39946:Oryza sativa Indica
Group
Length = 234
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtca 224
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 80 taaattttttgaataagacgaatggtcaaacatgtttaaaaaagtcaacggtgtca 25
Score = 54.0 bits (27), Expect = 1e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 33 tgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaaaaa 83
|||| ||||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 25 tgacaccgttgacttttttaaacatgtttgaccattcgtcttattcaaaaa 75
>RF01058;MIR806;AACV01000135.1/781-539 39947:Oryza sativa Japonica
Group
Length = 243
Score = 79.8 bits (40), Expect = 2e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 56 atgtttgacaattcgtcttattcaaaaaca-ttacataattataatttattttattatga 114
||||||||| |||||||||||||||||| | ||| ||||||||||||||||||||||||
Sbjct: 49 atgtttgaccattcgtcttattcaaaaaaaattatgtaattataatttattttattatga 108
Query: 115 gttgttttatca 126
||| |||||||
Sbjct: 109 cttgatttatca 120
Score = 60.0 bits (30), Expect = 2e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacgg 219
|||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 76 tttttgaataagacgaatggtcaaacattgattaaaaagtcaacgg 31
>RF01058;MIR806;AAAA02007626.1/5251-5022 39946:Oryza sativa Indica
Group
Length = 230
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtca 224
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 74 taaaatttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtca 19
Score = 54.0 bits (27), Expect = 1e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 33 tgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaaaaa 83
|||| ||||||| ||||| | ||||||||||| |||||||||||||||||
Sbjct: 19 tgacaccgttgactttttagcacatgtttgaccgttcgtcttattcaaaaa 69
>RF01058;MIR806;AACV01027603.1/5402-5167 39947:Oryza sativa Japonica
Group
Length = 236
Score = 79.8 bits (40), Expect = 2e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtca 224
|||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 80 taaattttttgaataagacgaatggtcaaacacgtactaaaaagtcaacggtgtca 25
Score = 61.9 bits (31), Expect = 4e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 33 tgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaaaaa 83
|||| ||||||| ||||| |||| |||||||| ||||||||||||||||||
Sbjct: 25 tgacaccgttgactttttagtacgtgtttgaccattcgtcttattcaaaaa 75
>RF01062;MIR812;AP008217.1/19787492-19787662 39947:Oryza sativa
Japonica Group
Length = 171
Score = 77.8 bits (39), Expect = 7e-14
Identities = 115/135 (85%), Gaps = 4/135 (2%)
Strand = Plus / Minus
Query: 66 attcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatc 125
|||| ||||||| ||||| |||| ||||||| |||||||||||||||| ||| ||||||
Sbjct: 148 attcatcttattaaaaaa-attatgtaattatcatttattttattatgatttgatttatc 90
Query: 126 actcata-gtactttaagtgtgatttatat-tttataaatttgcataaaatttttgaata 183
| ||| | || |||||||| |||| || || ||| || |||||||| ||| |||||||||
Sbjct: 89 a-tcaaatgttctttaagtatgatataaatatttttatatttgcatcaaaattttgaata 31
Query: 184 agacgaatggtcaaa 198
|||||||||||||||
Sbjct: 30 agacgaatggtcaaa 16
>RF01058;MIR806;AL731620.2/83760-83522 39947:Oryza sativa Japonica
Group
Length = 239
Score = 77.8 bits (39), Expect = 7e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 178 tgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaac 237
||||||||||||| |||||||||||| |||||||||||||||||| |||| | ||||
Sbjct: 169 tgaataagacgaacggtcaaacatgtgccaaaaagtcaacggtgtcaaatatttagaaac 228
Query: 238 ggagggagtat 248
|||||||||||
Sbjct: 229 ggagggagtat 239
Score = 63.9 bits (32), Expect = 1e-09
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||||||||| | |||| |||| ||||||| ||||| | ||||||||||| ||
Sbjct: 239 atactccctccgtttctaaatatttgacaccgttgactttttggcacatgtttgaccgtt 180
Query: 69 cgtcttattcaaaaac 84
||||||||||| ||||
Sbjct: 179 cgtcttattcagaaac 164
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 175 ttttgaataagacgaatggtcaaacat 201
|||||||||| ||||||||||||||||
Sbjct: 72 ttttgaataaaacgaatggtcaaacat 46
>RF01058;MIR806;AAAA02030957.1/6469-6721 39946:Oryza sativa Indica
Group
Length = 253
Score = 77.8 bits (39), Expect = 7e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||||||||||||||||| | ||| |||||||||||||||||| ||
Sbjct: 80 taaattttttgaataagacgaatggtcaaatacgtactaaaaagtcaacggtgtcaaata 21
Query: 229 ttaaaaaacggagggagta 247
|| ||||||||||||||
Sbjct: 20 ttttgaaacggagggagta 2
Score = 60.0 bits (30), Expect = 2e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||||| |||| |||| ||||||| ||||| |||| | |||||| ||||
Sbjct: 2 tactccctccgtttcaaaatatttgacaccgttgactttttagtacgtatttgaccattc 61
Query: 70 gtcttattcaaaaa 83
||||||||||||||
Sbjct: 62 gtcttattcaaaaa 75
>RF01058;MIR806;AAAA02032886.1/15188-15408 39946:Oryza sativa Indica
Group
Length = 221
Score = 77.8 bits (39), Expect = 7e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtca 224
|||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 157 tttttgaataagacgaatggtcaaacatgtttgaaaaagtcaacggcgtca 207
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 33 tgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaaaaa 83
|||||||||||| |||||| ||||||||||| ||||||||||||||||||
Sbjct: 207 tgacgccgttgactttttcaaacatgtttgaccattcgtcttattcaaaaa 157
Score = 54.0 bits (27), Expect = 1e-06
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtca 224
||||| ||||||||||| |||||||||||| ||||||||||||| ||||
Sbjct: 65 tttttaaataagacgaacggtcaaacatgtttaaaaaagtcaacggcgtca 15
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 33 tgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaaaaa 83
|||||||||||| ||||| ||||||||||| ||||||||||| |||||
Sbjct: 15 tgacgccgttgacttttttaaacatgtttgaccgttcgtcttatttaaaaa 65
>RF01058;MIR806;AC120529.3/43304-43071 39947:Oryza sativa Japonica
Group
Length = 234
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
||||||||||||||||| |||||||||| | |||||||||||||||||| |||| ||
Sbjct: 160 tttttgaataagacgaacggtcaaacatatgttaaaaagtcaacggtgtcaaatatttaa 219
Query: 234 aaacggagggagtat 248
|||||||| ||||||
Sbjct: 220 aaacggagagagtat 234
Score = 54.0 bits (27), Expect = 1e-06
Identities = 63/75 (84%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||| |||||||||| |||| |||| ||||||| ||||| | ||||||||| ||
Sbjct: 234 atactctctccgtttttaaatatttgacaccgttgactttttaacatatgtttgaccgtt 175
Query: 69 cgtcttattcaaaaa 83
|||||||||||||||
Sbjct: 174 cgtcttattcaaaaa 160
>RF01058;MIR806;AC116949.11/117523-117284 39947:Oryza sativa
Japonica Group
Length = 240
Score = 77.8 bits (39), Expect = 7e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||| ||||||||||||||||||||||||| ||||||||||||| || | ||
Sbjct: 80 taaatttttttaataagacgaatggtcaaacatgtactaaaaagtcaacggcgttaaata 21
Query: 229 ttaaaaaacggagggagta 247
|| |||||||||||||||
Sbjct: 20 ttttaaaacggagggagta 2
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
||||||||||||||| |||| | |||||||||| ||||| ||||||||||||| ||||
Sbjct: 2 tactccctccgttttaaaatatttaacgccgttgactttttagtacatgtttgaccattc 61
Query: 70 gtcttattcaaaaa 83
|||||||| |||||
Sbjct: 62 gtcttattaaaaaa 75
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
|||||||||||||||||||||||| |||||
Sbjct: 195 acatgtttgacaattcgtcttattaaaaaa 166
Score = 46.1 bits (23), Expect = 2e-04
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtca 224
||||| |||||||||||| ||||||||||| |||| || ||||||||||
Sbjct: 166 ttttttaataagacgaattgtcaaacatgtgctaaaaggttaacggtgtca 216
>RF01058;MIR806;AACV01005659.1/15097-14857 39947:Oryza sativa
Japonica Group
Length = 241
Score = 77.8 bits (39), Expect = 7e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 170 aaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtca 224
||||||||||||||||||||| |||||||||||| | ||||||||||||| ||||
Sbjct: 163 aaaatttttgaataagacgaacggtcaaacatgtgataaaaagtcaacggcgtca 217
Score = 54.0 bits (27), Expect = 1e-06
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 33 tgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaaaaa 83
|||||||||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 217 tgacgccgttgactttttatcacatgtttgaccgttcgtcttattcaaaaa 167
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 68 tcgtcttattcaaaaacattacataattat 97
|||||||||||||||| |||| ||||||||
Sbjct: 60 tcgtcttattcaaaaaaattaaataattat 89
>RF01058;MIR806;AACV01015174.1/7144-6908 39947:Oryza sativa Japonica
Group
Length = 237
Score = 77.8 bits (39), Expect = 7e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
|||||||||||||| ||||||||||| | || |||||||||| |||||| |||||||
Sbjct: 75 tttttgaataagacaaatggtcaaacgtatatcaaaaagtcaattatgtcatatattaaa 16
Query: 234 aaacggagggagtat 248
|||||||||||||||
Sbjct: 15 aaacggagggagtat 1
Score = 75.8 bits (38), Expect = 3e-13
Identities = 86/102 (84%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||||||||| ||||| |||| ||||| || | ||||||| |||
Sbjct: 1 atactccctccgttttttaatatatgacataattgactttttgatatacgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttatt 110
|||||||||||||| |||| ||||||| ||||||||||||
Sbjct: 61 tgtcttattcaaaaaaattatgtaattatcatttattttatt 102
>RF01058;MIR806;AL662977.3/157932-158171 39947:Oryza sativa Japonica
Group
Length = 240
Score = 77.8 bits (39), Expect = 7e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
|||||||||||||||||||||||||||||| |||||||||||||||| | |||| |
Sbjct: 74 tttttgaataagacgaatggtcaaacatgtttaaaaaagtcaacggtgt-aaatatttag 16
Query: 234 aaacggagggagtat 248
|||||||||||||||
Sbjct: 15 aaacggagggagtat 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||||||||| | |||| | || ||||||| ||||| ||||||||||| |||
Sbjct: 1 atactccctccgtttctaaatattt-acaccgttgacttttttaaacatgtttgaccatt 59
Query: 69 cgtcttattcaaaaa 83
|||||||||||||||
Sbjct: 60 cgtcttattcaaaaa 74
>RF01058;MIR806;AACV01017874.1/22340-22580 39947:Oryza sativa
Japonica Group
Length = 241
Score = 77.8 bits (39), Expect = 7e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 170 aaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtca 224
||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 163 aaaatttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtca 217
Score = 71.9 bits (36), Expect = 4e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||||||||| ||| |||||||| |||||||||||||||||| |
Sbjct: 80 taaattttttgaataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaaca 21
Query: 229 ttaaaaaacggagggagtat 248
|| ||||||||||||||||
Sbjct: 20 tttcaaaacggagggagtat 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||| ||| |||| ||||||| ||||| | |||||||| || ||
Sbjct: 1 atactccctccgttttgaaatgtttgacaccgttgactttttagcacatgtttaaccgtt 60
Query: 69 cgtcttattcaaaaa 83
|||||||||||||||
Sbjct: 61 cgtcttattcaaaaa 75
Score = 54.0 bits (27), Expect = 1e-06
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 33 tgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaaaaa 83
|||| ||||||| ||||| | ||||||||||| |||||||||||||||||
Sbjct: 217 tgacaccgttgactttttagcacatgtttgaccgttcgtcttattcaaaaa 167
>RF01062;MIR812;EF578138.1/290-461 110450:Oryza granulata
Length = 172
Score = 75.8 bits (38), Expect = 3e-13
Identities = 120/144 (83%), Gaps = 5/144 (3%)
Strand = Plus / Minus
Query: 59 tttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagttg 118
|||||| |||||||||||| ||||| ||| ||| ||| ||||||||| |||||| |||
Sbjct: 156 tttgaccattcgtcttatttaaaaa-att---taagtatgatttattttgttatgacttg 101
Query: 119 ttttatcactcatagtactttaagtgtgatttatatttt-ataaatttgcataaaatttt 177
||||||| | | | |||||||| ||| ||||||||| ||| |||| ||| || ||||
Sbjct: 100 atttatcattaaaggaactttaagcatgacttatatttttatatatttacattaattttt 41
Query: 178 tgaataagacgaatggtcaaacat 201
||||||||||||||||||||||||
Sbjct: 40 tgaataagacgaatggtcaaacat 17
Score = 48.1 bits (24), Expect = 6e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 56 atgtttgacaattcgtcttattcaaaaa 83
||||||||| ||||||||||||||||||
Sbjct: 17 atgtttgaccattcgtcttattcaaaaa 44
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 169 taaaatttttgaataagacgaatggtcaaa 198
|||| ||||| |||||||||||||||||||
Sbjct: 127 taaattttttaaataagacgaatggtcaaa 156
>RF01062;MIR812;AP008215.1/12412383-12412555 39947:Oryza sativa
Japonica Group
Length = 173
Score = 75.8 bits (38), Expect = 3e-13
Identities = 122/145 (84%), Gaps = 5/145 (3%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
|||||||| ||||||||||||||||| ||| ||||||| |||||||||||| ||| ||
Sbjct: 158 gtttgacatttcgtcttattcaaaaaatttatgtaattattatttattttattgtgactt 99
Query: 118 gttttatcactcata-gtactttaagtgtgattta--tattttataaatttgcataaaat 174
| ||||||| ||| | || |||||||| ||| || |||||| || ||||| ||||||
Sbjct: 98 gatttatca-tcaaatgttctttaagtatgacataagtatttt-tatatttgtataaaaa 41
Query: 175 ttttgaataagacgaatggtcaaac 199
||||||||||||||||||||||||
Sbjct: 40 atttgaataagacgaatggtcaaac 16
>RF01062;MIR812;AP004232.4/106197-106029 39947:Oryza sativa Japonica
Group
Length = 169
Score = 75.8 bits (38), Expect = 3e-13
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 66 attcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatc 125
|||||||||||| ||||| |||||||||||||||||||||| || ||||||||||||||
Sbjct: 146 attcgtcttattaaaaaat-ttacataattataatttattttgttgtgagttgttttatc 88
Query: 126 actcatagtactttaagt 143
|| ||||||||||||
Sbjct: 87 gtgcaaagtactttaagt 70
>RF01062;MIR812;AP004254.3/49893-50064 39947:Oryza sativa Japonica
Group
Length = 172
Score = 75.8 bits (38), Expect = 3e-13
Identities = 118/142 (83%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
||||||| |||||||||||||||||| ||| |||| || |||||||||| | ||| ||
Sbjct: 157 gtttgaccattcgtcttattcaaaaaatttatgtaatcatcatttattttactgtgactt 98
Query: 118 gttttatca-ctcatagtactttaagtgtgatttatattttataaatttgcataaaattt 176
| ||||||| | |||| | ||||||| ||| || || || || |||||||||||| ||
Sbjct: 97 gatttatcatcacatatt-ctttaagcatgacctaaatattttatatttgcataaaaatt 39
Query: 177 ttgaataagacgaatggtcaaa 198
||||||||||||||||||||||
Sbjct: 38 ttgaataagacgaatggtcaaa 17
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 167 cataaaatttttgaataagacgaatggtcaaac 199
|||||| ||||||||||||||||||||||||||
Sbjct: 125 cataaattttttgaataagacgaatggtcaaac 157
>RF01058;MIR806;AAAA02017411.1/6837-6597 39946:Oryza sativa Indica
Group
Length = 241
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
|||||||||||||||||||||||||||| | |||||||||||||||||| |||| |
Sbjct: 167 tttttgaataagacgaatggtcaaacatatgctaaaaagtcaacggtgtcaaatatttag 226
Query: 234 aaacggagggagta 247
||||||| ||||||
Sbjct: 227 aaacggatggagta 240
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||| ||||||| | |||| |||| ||||||| ||||| | | ||||||||| ||||
Sbjct: 240 tactccatccgtttctaaatatttgacaccgttgactttttagcatatgtttgaccattc 181
Query: 70 gtcttattcaaaaac 84
|||||||||||||||
Sbjct: 180 gtcttattcaaaaac 166
>RF01058;MIR806;AACV01017103.1/1019-780 39947:Oryza sativa Japonica
Group
Length = 240
Score = 75.8 bits (38), Expect = 3e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 162 atttgcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtg 221
|||||||||||| |||| |||||||||||||||||||| | | |||||||||||| ||
Sbjct: 154 atttgcataaaaattttaaataagacgaatggtcaaacgttgattaaaaagtcaacgatg 213
Query: 222 tcatctattaaaaaacggaggg 243
|||| ||||||| ||||||||
Sbjct: 214 tcatacattaaaatacggaggg 235
>RF01058;MIR806;ABRL01001255.1/9350-9110 65489:Oryza barthii
Length = 241
Score = 75.8 bits (38), Expect = 3e-13
Identities = 99/118 (83%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||||||||||| ||||||| |||||||| |||| ||||| | ||||||||| ||
Sbjct: 1 atactccctccgtattttaatgtatgacgccattgactttttaacaaatgtttgaccttt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttattatgagttgttttatca 126
||||||||| ||||| |||| ||||||| |||||||||||| ||| ||| |||||||
Sbjct: 61 cgtcttatt-aaaaaaattatgtaattatcatttattttattgtgacttgatttatca 117
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
||||| ||||||||||| |||||||||| | |||||||||| || ||||| ||||||
Sbjct: 75 ttttttaataagacgaaaggtcaaacatttgttaaaaagtcaatggcgtcatacattaaa 16
Query: 234 aaacggagggagtat 248
| |||||||||||||
Sbjct: 15 atacggagggagtat 1
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgatttttt 50
||||||||||||| ||||||| ||||||||||||| |||||
Sbjct: 241 atactccctccgtattttaatgtatgacgccgttgacttttt 200
>RF01058;MIR806;AAAA02027128.1/9964-10206 39946:Oryza sativa Indica
Group
Length = 243
Score = 75.8 bits (38), Expect = 3e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 162 atttgcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtg 221
|||||||||||| ||||||||||||||||||| |||| | | ||||||||||||| |
Sbjct: 157 atttgcataaaaaatttgaataagacgaatggttaaacgttgattaaaaagtcaacggcg 216
Query: 222 tcatctattaaaaaacggagggagta 247
|||| ||||||| ||||||||||||
Sbjct: 217 tcatacattaaaatacggagggagta 242
Score = 56.0 bits (28), Expect = 3e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||| ||||||| ||||||||||||| ||||| | | |||| || ||||
Sbjct: 242 tactccctccgtattttaatgtatgacgccgttgactttttaatcaacgtttaaccattc 183
Query: 70 gtcttattcaaa 81
||||||||||||
Sbjct: 182 gtcttattcaaa 171
>RF01058;MIR806;AAAA02029319.1/3559-3800 39946:Oryza sativa Indica
Group
Length = 242
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
||||| |||||||||||||||||||||||| ||||||| |||||||||| |||| |
Sbjct: 168 tttttaaataagacgaatggtcaaacatgtgctaaaaagttaacggtgtcaaatatttag 227
Query: 234 aaacggagggagta 247
||||||||||||||
Sbjct: 228 aaacggagggagta 241
Score = 61.9 bits (31), Expect = 4e-09
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||||| | |||| |||| ||||| | ||||| | ||||||||||| ||||
Sbjct: 241 tactccctccgtttctaaatatttgacaccgttaactttttagcacatgtttgaccattc 182
Query: 70 gtcttattcaaaaac 84
|||||||| ||||||
Sbjct: 181 gtcttatttaaaaac 167
>RF01058;MIR806;AAAA02004910.1/11974-11734 39946:Oryza sativa Indica
Group
Length = 241
Score = 75.8 bits (38), Expect = 3e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 170 aaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctat 229
||||||||||||||||||||| ||||||| |||| ||||||| |||||||||| |||
Sbjct: 163 aaaatttttgaataagacgaacggtcaaatatgtggtaaaaagttaacggtgtcaaatat 222
Query: 230 taaaaaacggagggagta 247
| | ||||||||||||||
Sbjct: 223 ttagaaacggagggagta 240
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaa 198
|||| |||||||||||||| ||||||||||
Sbjct: 80 taaattttttgaataagacaaatggtcaaa 51
Score = 44.1 bits (22), Expect = 0.001
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||||| | |||| |||| ||||| | ||||| |||| |||||| |||
Sbjct: 240 tactccctccgtttctaaatatttgacaccgttaactttttaccacatatttgaccgttc 181
Query: 70 gtcttattcaaaaa 83
||||||||||||||
Sbjct: 180 gtcttattcaaaaa 167
>RF01058;MIR806;AL713944.3/10154-9914 4530:Oryza sativa (rice)
Length = 241
Score = 75.8 bits (38), Expect = 3e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 162 atttgcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtg 221
|||||||||||||||||||||||||||||| ||||||| | | |||||||||||| |
Sbjct: 155 atttgcataaaatttttgaataagacgaatagtcaaacgtttgtcgaaaagtcaacggcg 214
Query: 222 tcatctattaaaaaacggagggagta 247
|||| |||||| ||||||||||||
Sbjct: 215 tcatacgttaaaacacggagggagta 240
Score = 73.8 bits (37), Expect = 1e-12
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatc 226
|||||| ||||||||||||| |||||||||||||| | ||||||||||| | |||||
Sbjct: 82 cataaattttttgaataagatgaatggtcaaacattggacaaaaagtcaacagcgtcata 23
Query: 227 tattaaaaaacggagggagta 247
||||||| ||||||||||||
Sbjct: 22 cattaaaatacggagggagta 2
Score = 65.9 bits (33), Expect = 3e-10
Identities = 86/101 (85%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtaca-tgtttgacaatt 68
|||||||||||| ||||||| ||||||| ||||| ||||| || || |||||||| |||
Sbjct: 2 tactccctccgtattttaatgtatgacgctgttgacttttt-gtccaatgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattttat 109
| ||||||||||||| ||| ||||||| |||||||||||
Sbjct: 61 catcttattcaaaaaatttatgtaattatcatttattttat 101
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||| |||||| ||||||||||||| |||| | | ||||||| ||||
Sbjct: 240 tactccctccgtgttttaacgtatgacgccgttgacttttcgacaaacgtttgactattc 181
Query: 70 gtcttattcaaaaa 83
||||||||||||||
Sbjct: 180 gtcttattcaaaaa 167
>RF01058;MIR806;AP008209.1/1121018-1120771 39947:Oryza sativa
Japonica Group
Length = 248
Score = 75.8 bits (38), Expect = 3e-13
Identities = 89/106 (83%)
Strand = Plus / Plus
Query: 21 ttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtcttattcaa 80
|||||||||| |||||| |||||| ||||| | | |||||| |||||||||||||||
Sbjct: 14 ttttttaatatatgacgtcgttgactttttgagatacgtttgatcattcgtcttattcaa 73
Query: 81 aaacattacataattataatttattttattatgagttgttttatca 126
|||| ||| ||||||| |||||||||||| ||| ||| |||||||
Sbjct: 74 aaactttatgtaattattatttattttattgtgacttgatttatca 119
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 175 ttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaa 234
||||||||||||||||| ||||||| | ||||||| ||||||||||| ||||||||
Sbjct: 175 ttttgaataagacgaatagtcaaacgttggtcaaaaagttaacggtgtcatatattaaaa 234
Query: 235 aacggagggagtat 248
|||||||| |||||
Sbjct: 235 aacggaggtagtat 248
Score = 60.0 bits (30), Expect = 2e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatc 226
|||||| ||||||||||||||||||| |||||| | | |||||||||||| |||||
Sbjct: 83 cataaagtttttgaataagacgaatgatcaaacgtatctcaaaaagtcaacgacgtcata 24
Query: 227 tattaaaaaa 236
||||||||||
Sbjct: 23 tattaaaaaa 14
Score = 52.0 bits (26), Expect = 4e-06
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| |||||||||||||||| ||||| ||||| | ||||| | ||||||| |||
Sbjct: 248 atactacctccgttttttaatatatgacaccgttaactttttgaccaacgtttgactatt 189
Query: 69 cgtcttattcaaaa 82
||||||||||||||
Sbjct: 188 cgtcttattcaaaa 175
>RF01058;MIR806;AP008211.1/4711397-4711161 39947:Oryza sativa
Japonica Group
Length = 237
Score = 75.8 bits (38), Expect = 3e-13
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
||||||||||||||||| |||||||||||| ||||||||||||| |||| |||| |
Sbjct: 163 tttttgaataagacgaacggtcaaacatgtttaaaaaagtcaacggcgtcaaatatttag 222
Query: 234 aaacggagggagta 247
||||||||||||||
Sbjct: 223 aaacggagggagta 236
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||||| | |||| |||||||||||| ||||| ||||||||||| |||
Sbjct: 236 tactccctccgtttctaaatatttgacgccgttgacttttttaaacatgtttgaccgttc 177
Query: 70 gtcttattcaaaaa 83
||||||||||||||
Sbjct: 176 gtcttattcaaaaa 163
>RF01062;MIR812;AC232899.1/162559-162387 4535:Oryza officinalis
Length = 173
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
||||||| |||||||||||||||||| |||| |||| ||| ||||||||| |||| | ||
Sbjct: 158 gtttgaccattcgtcttattcaaaaaaattatataaatatgatttattttgttataattt 99
Query: 118 gttttatca 126
|||||||||
Sbjct: 98 gttttatca 90
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaac 199
||||||||||||||||||||||||||
Sbjct: 133 tttttgaataagacgaatggtcaaac 158
>RF01062;MIR812;AAAA02029036.1/5658-5486 39946:Oryza sativa Indica
Group
Length = 173
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatgagtt 117
|||||||||||| ||||||| ||||| |||| ||||||| |||||||||||||||| ||
Sbjct: 158 gtttgacaattcatcttattaaaaaaaattatgtaattatcatttattttattatgactt 99
Query: 118 gttttatca 126
| |||||||
Sbjct: 98 gatttatca 90
>RF01062;MIR812;AAAA02000437.1/29937-30108 39946:Oryza sativa Indica
Group
Length = 172
Score = 73.8 bits (37), Expect = 1e-12
Identities = 112/137 (81%)
Strand = Plus / Minus
Query: 67 ttcgtcttattcaaaaacattacataattataatttattttattatgagttgttttatca 126
||||||||||| ||||| ||| | |||||||| |||||| || | |||||||||||||
Sbjct: 148 ttcgtcttatttaaaaaatctacgtgattataatatattttgttttcagttgttttatca 89
Query: 127 ctcatagtactttaagtgtgatttatattttataaatttgcataaaatttttgaataaga 186
| | | |||||| | | |||||||| | ||| ||||||| || ||||||||||||||
Sbjct: 88 tttaaactactttcaacataatttatatctcatatatttgcaaaatatttttgaataaga 29
Query: 187 cgaatggtcaaacatgt 203
| |||||||||||||||
Sbjct: 28 caaatggtcaaacatgt 12
Score = 44.1 bits (22), Expect = 0.001
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
||||||||||| ||| ||||||||||||||
Sbjct: 12 acatgtttgaccatttgtcttattcaaaaa 41
>RF01062;MIR812;AP008208.1/20187439-20187612 39947:Oryza sativa
Japonica Group
Length = 174
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 58 gtttgacaattcgtcttattcaaaaacattacataattataatttattttattatga 114
||||||| |||||||||||||||||| |||| ||||||| ||||||||||||||||
Sbjct: 159 gtttgaccattcgtcttattcaaaaaaattatgtaattatcatttattttattatga 103
Score = 52.0 bits (26), Expect = 4e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaac 199
||||||||||||||||||||||||||
Sbjct: 134 tttttgaataagacgaatggtcaaac 159
>RF01058;MIR806;AAAA02006652.1/21120-20860 39946:Oryza sativa Indica
Group
Length = 261
Score = 73.8 bits (37), Expect = 1e-12
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
||||||||||||||||| |||||||||||| |||||||||||||||||| |||| |
Sbjct: 189 tttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaatatttag 248
Query: 234 aaacggagg 242
|||||||||
Sbjct: 249 aaacggagg 257
Score = 60.0 bits (30), Expect = 2e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 15 cctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattcgtctt 74
||||||||| | |||| |||| ||||||| ||||| | ||||||||||| ||||||||
Sbjct: 257 cctccgtttctaaatatttgacaccgttgactttttagcacatgtttgaccgttcgtctt 198
Query: 75 attcaaaaac 84
||||||||||
Sbjct: 197 attcaaaaac 188
>RF01058;MIR806;AAAA02008185.1/15144-15373 39946:Oryza sativa
Indica Group
Length = 230
Score = 73.8 bits (37), Expect = 1e-12
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
|||||||||||||||| ||| |||| ||||||||||||| |||| |||||||| |||
Sbjct: 1 atactccctccgttttaaaatgtttgacaccgttgattttttagtacgtgtttgaccatt 60
Query: 69 cgtcttattcaaaaacattacataattat 97
| ||||||||||||| ||| ||||||||
Sbjct: 61 catcttattcaaaaaatttaaataattat 89
Score = 71.9 bits (36), Expect = 4e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 169 taaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatcta 228
|||| ||||||||||||| ||||||||||||| ||| ||||| |||||||||||| |
Sbjct: 80 taaattttttgaataagatgaatggtcaaacacgtactaaaaaatcaacggtgtcaaaca 21
Query: 229 ttaaaaaacggagggagtat 248
|| ||||||||||||||||
Sbjct: 20 ttttaaaacggagggagtat 1
Score = 54.0 bits (27), Expect = 1e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtca 224
||||| ||||||||||| ||||||||| || ||||||||||||||||||
Sbjct: 156 ttttttaataagacgaacggtcaaacacgtgctaaaaagtcaacggtgtca 206
>RF01058;MIR806;AACV01025602.1/829-590 39947:Oryza sativa Japonica
Group
Length = 240
Score = 73.8 bits (37), Expect = 1e-12
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 170 aaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacg 218
|||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 162 aaaatttttgaataagacgaatggtcaaacatgttttaaaaagtcaacg 210
Score = 52.0 bits (26), Expect = 4e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 54 acatgtttgacaattcgtcttattcaaaaa 83
||||||||||| ||||||||||||||||||
Sbjct: 195 acatgtttgaccattcgtcttattcaaaaa 166
>RF01058;MIR806;AP003504.1/120118-120357 39947:Oryza sativa Japonica
Group
Length = 240
Score = 73.8 bits (37), Expect = 1e-12
Identities = 81/93 (87%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 23 ttttaatagatgacgccgttgattttttcgtaca-tgtttgacaattcgtcttattcaaa 81
|||||||| ||||||||||| | ||||| || || |||||||| |||||| |||||||||
Sbjct: 15 ttttaatatatgacgccgttaacttttt-gtccaatgtttgaccattcgttttattcaaa 73
Query: 82 aacattacataattataatttattttattatga 114
|| ||| |||||||| ||||||||||||||||
Sbjct: 74 aaatttatataattattatttattttattatga 106
Score = 61.9 bits (31), Expect = 4e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 168 ataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatct 227
||||| ||||||||||| |||||||||||||||| | ||||||| ||||| ||||| |
Sbjct: 81 ataaattttttgaataaaacgaatggtcaaacattggacaaaaagttaacggcgtcatat 22
Query: 228 attaaaa 234
|||||||
Sbjct: 21 attaaaa 15
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttt 49
|||||||||||| |||||||| ||||||||||||| ||||
Sbjct: 239 tactccctccgtattttaatatatgacgccgttgactttt 200
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 208 aaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 200 aaaagtcaacggcgtcatatattaaaatacggagggagta 239
>RF01058;MIR806;AP008208.1/7329936-7330138 39947:Oryza sativa
Japonica Group
Length = 203
Score = 73.8 bits (37), Expect = 1e-12
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 164 ttgcataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtc 223
||||||||| ||||||| |||||||||||||||||||| | ||||||||||||| |||
Sbjct: 85 ttgcataaattttttgagtaagacgaatggtcaaacattggataaaaagtcaacggcgtc 26
Query: 224 atctattaaaaaacggagggagtat 248
|| ||||||| | ||||| |||||
Sbjct: 25 atacattaaaatatggaggtagtat 1
Score = 56.0 bits (28), Expect = 3e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 208 aaaagtcaacggtgtcatctattaaaaaacggagggagta 247
|||||||||||||||||| ||||||| ||||||||||||
Sbjct: 163 aaaagtcaacggtgtcatgcattaaaatacggagggagta 202
Score = 46.1 bits (23), Expect = 2e-04
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| ||||| | ||||||| ||||||||||||| ||||| ||||||||| |||
Sbjct: 1 atactacctccatattttaatgtatgacgccgttgactttttatccaatgtttgaccatt 60
Query: 69 cgtcttattcaaaaa 83
||||||| |||||||
Sbjct: 61 cgtcttactcaaaaa 75
>RF01058;MIR806;AAAA02018512.1/11882-11641 39946:Oryza sativa Indica
Group
Length = 242
Score = 73.8 bits (37), Expect = 1e-12
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 168 ataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatct 227
|||||| |||||||||||||||| |||||||| | || |||||||||||||||||||
Sbjct: 81 ataaaacttttgaataagacgaacggtcaaacgttgaacaaaaagtcaacggtgtcatac 22
Query: 228 attaaaaaacggagggagtat 248
||||||| | ||||| |||||
Sbjct: 21 attaaaatatggaggtagtat 1
Score = 50.1 bits (25), Expect = 2e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 177 ttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaaaaa 236
|||||||| || ||||||||||||| ||||||||||||| ||||| ||||||| |
Sbjct: 171 ttgaataaaacaaatggtcaaacattgctcaaaaagtcaacggcgtcatacattaaaata 230
Query: 237 cggagggag 245
|||||||||
Sbjct: 231 cggagggag 239
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 12 ctccctccgttttttaatagatgacgccgttgatttttt 50
|||||||||| ||||||| ||||||||||||| |||||
Sbjct: 239 ctccctccgtattttaatgtatgacgccgttgacttttt 201
Score = 44.1 bits (22), Expect = 0.001
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 9 atactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaatt 68
||||| ||||| | ||||||| ||||| ||||||| ||||| | | ||||||| ||
Sbjct: 1 atactacctccatattttaatgtatgacaccgttgactttttgttcaacgtttgaccgtt 60
Query: 69 cgtcttattcaaaaacattacataattataatttattt 106
|||||||||||||| ||| |||||||| ||||||||
Sbjct: 61 cgtcttattcaaaagttttatataattatcatttattt 98
>RF01058;MIR806;AACV01014792.1/12864-12624 39947:Oryza sativa
Japonica Group
Length = 241
Score = 73.8 bits (37), Expect = 1e-12
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| ||||| | ||||||| ||||||||||||||||||| | | ||||||| ||||
Sbjct: 2 tactacctccatattttaatgtatgacgccgttgattttttatcaaacgtttgaccattc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttatt 110
|||||||||||||| ||| | |||||| ||||||||||||
Sbjct: 62 gtcttattcaaaaaatttatacaattatcatttattttatt 102
Score = 63.9 bits (32), Expect = 1e-09
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 168 ataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatct 227
||||| |||||||||||||||||||||||||| | | | ||||| ||||||| |||||
Sbjct: 81 ataaattttttgaataagacgaatggtcaaacgtttgataaaaaatcaacggcgtcatac 22
Query: 228 attaaaaaacggagggagta 247
||||||| | ||||| ||||
Sbjct: 21 attaaaatatggaggtagta 2
>RF01058;MIR806;AP008209.1/33184887-33184654 39947:Oryza sativa
Japonica Group
Length = 234
Score = 73.8 bits (37), Expect = 1e-12
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||||||||||| ||||||| ||||||| ||||| ||||| | | ||||||| ||||
Sbjct: 2 tactccctccgtattttaatgtatgacgctgttgactttttaattaacgtttgaccattc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttatt 110
|||||||||||||| || |||||||| ||||||||||||
Sbjct: 62 gtcttattcaaaaaatttctataattatcatttattttatt 102
Score = 67.9 bits (34), Expect = 7e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 174 tttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatctattaaa 233
|||||||||||||||||||||||||| | | ||||||||||| | ||||| ||||||
Sbjct: 75 tttttgaataagacgaatggtcaaacgttaattaaaaagtcaacagcgtcatacattaaa 16
Query: 234 aaacggagggagta 247
| ||||||||||||
Sbjct: 15 atacggagggagta 2
Score = 44.1 bits (22), Expect = 0.001
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 9 atactccctccgttttttaatagatgacgccgttgatttttt 50
||||||||||||| ||||||| |||||||| |||| |||||
Sbjct: 234 atactccctccgtattttaatgtatgacgccattgacttttt 193
Score = 44.1 bits (22), Expect = 0.001
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 207 aaaaagtcaacggtgtcatctattaaaaaacggagggagtat 248
|||||||||| || ||||| ||||||| |||||||||||||
Sbjct: 193 aaaaagtcaatggcgtcatacattaaaatacggagggagtat 234
>RF01058;MIR806;AP008217.1/17463708-17463468 39947:Oryza sativa
Japonica Group
Length = 241
Score = 73.8 bits (37), Expect = 1e-12
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 10 tactccctccgttttttaatagatgacgccgttgattttttcgtacatgtttgacaattc 69
|||| ||||| | |||||||| ||||||||||||| ||||| | ||||||| ||||
Sbjct: 2 tactacctccatattttaatatatgacgccgttgactttttatctaacgtttgaccattc 61
Query: 70 gtcttattcaaaaacattacataattataatttattttattatga 114
|||||||||||||| ||| ||||||| ||||||||||||||||
Sbjct: 62 gtcttattcaaaaaatttatgtaattatcatttattttattatga 106
Score = 73.8 bits (37), Expect = 1e-12
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 167 cataaaatttttgaataagacgaatggtcaaacatgtaagaaaaagtcaacggtgtcatc 226
|||||| |||||||||||||||||||||||||| | | ||||||||||||| |||||
Sbjct: 82 cataaattttttgaataagacgaatggtcaaacgttagataaaaagtcaacggcgtcata 23
Query: 227 tattaaaaaacggagggagta 247
|||||||| | ||||| ||||
Sbjct: 22 tattaaaatatggaggtagta 2
