miRNEST 2.0, an integrative microRNA resource :: BLAST
>48799_oru-miR806:pmrd
Length = 242
Score = 198 bits (100), Expect = 1e-51
Identities = 170/191 (89%), Gaps = 3/191 (1%)
Strand = Plus / Plus
Query: 60 tttgaccgtttgtcttattcaaaa-aatttaagtaattattaattcttttcctatcattt 118
|||||||||| ||||||||||||| |||||||||||||| |||||| |||||||||||||
Sbjct: 51 tttgaccgttcgtcttattcaaaaaaatttaagtaattaataattcctttcctatcattt 110
Query: 119 gatttattgttaactatacttttatgtct--atatagttttacatatttcacaacagttt 176
||||||||||||| ||||||||||| | | ||||||||||| ||||||||||| | |||
Sbjct: 111 gatttattgttaaatatacttttatatatacatatagttttatatatttcacaaaaattt 170
Query: 177 ttgaaccaaacgaacggttaaacatgtttaaaaaagtcaacggcgtcaaatatttaagga 236
||||| | ||||||||| ||||||||||||||| |||||||||||||||||||| |||
Sbjct: 171 ttgaataagacgaacggtcaaacatgtttaaaaatatcaacggcgtcaaatatttaggga 230
Query: 237 tggagggagta 247
||||| ||||
Sbjct: 231 aggaggtagta 241
Score = 83.8 bits (42), Expect = 6e-17
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 186 acgaacggttaaacatgtttaaaaaagtcaacggcgtcaaatatttaaggatggagggag 245
||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 63 acgaacggtcaaatatatttaaaaaagtcaacggcgtcaaatattttgggatggagggag 4
Query: 246 ta 247
||
Sbjct: 3 ta 2
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 60 tttgaccgtttgtcttattcaaaaa 84
|||||||||| ||||||||||||||
Sbjct: 192 tttgaccgttcgtcttattcaaaaa 168
>49028_osa-miR806e:pmrd
Length = 255
Score = 180 bits (91), Expect = 3e-46
Identities = 154/174 (88%), Gaps = 2/174 (1%)
Strand = Plus / Plus
Query: 60 tttgaccgtttgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttg 119
|||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 58 tttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcttatcattta 117
Query: 120 atttattgttaactatacttttatgt--ctatatagttttacatatttcacaacagtttt 177
|||||||||||| |||| |||||||| ||||| ||||||||||||||||| ||||||
Sbjct: 118 atttattgttaaatatatttttatgtaggcatataattttacatatttcacaaaagtttt 177
Query: 178 tgaaccaaacgaacggttaaacatgtttaaaaaagtcaacggcgtcaaatattt 231
| || | ||||||||| |||||||| ||||||||||||| |||||||||||
Sbjct: 178 taaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaatattt 231
Score = 44.1 bits (22), Expect = 5e-05
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 186 acgaacggttaaacatgtttaaaaaagtcaacggcgtcaaatattt 231
||||||||| |||||| | |||||||||||||||||||| ||||
Sbjct: 70 acgaacggtcaaacatatgctaaaaagtcaacggcgtcaaacattt 25
>49031_osa-miR806h:pmrd
Length = 271
Score = 174 bits (88), Expect = 2e-44
Identities = 154/175 (88%), Gaps = 2/175 (1%)
Strand = Plus / Plus
Query: 60 tttgaccgtttgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttg 119
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tttgaccgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttg 122
Query: 120 atttattgttaactatacttttatgt--ctatatagttttacatatttcacaacagtttt 177
||| |||||||| |||| |||||||| ||||| |||||||||| |||||| ||||||
Sbjct: 123 attcattgttaaatatatttttatgtaggcatataattttacatatctcacaaaagtttt 182
Query: 178 tgaaccaaacgaacggttaaacatgtttaaaaaagtcaacggcgtcaaatattta 232
|||| | ||||| ||| |||||||| ||||||||||||| |||||| |||||
Sbjct: 183 tgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattta 237
Score = 40.1 bits (20), Expect = 8e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 10 tactccctccatctcaaaatgtttgacgccgttgac 45
|||||||||| | || ||||||||||| ||||||||
Sbjct: 252 tactccctccgtttctaaatgtttgacaccgttgac 217
>49026_osa-miR806c:pmrd
Length = 270
Score = 135 bits (68), Expect = 2e-32
Identities = 140/163 (85%), Gaps = 2/163 (1%)
Strand = Plus / Plus
Query: 71 gtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgatttattgtta 130
||||||||||||||||||||||||||||| ||| ||||| |||| |||||||||||||||
Sbjct: 78 gtcttattcaaaaaatttaagtaattatttatttttttcatatcgtttgatttattgtta 137
Query: 131 actatacttttatgt--ctatatagttttacatatttcacaacagtttttgaaccaaacg 188
| |||||||| |||| |||||||||||||||||||| || | |||||||| | |||
Sbjct: 138 aatatactttcatgtacacatatagttttacatatttcataaaattttttgaataagacg 197
Query: 189 aacggttaaacatgtttaaaaaagtcaacggcgtcaaatattt 231
|| ||| |||||||| ||||||||||||| |||||| ||||
Sbjct: 198 aatggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 240
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 60 tttgaccgtttgtcttattcaaaaaattt 88
||||||| || ||||||||||||||||||
Sbjct: 207 tttgaccattcgtcttattcaaaaaattt 179
>49029_osa-miR806f:pmrd
Length = 241
Score = 125 bits (63), Expect = 2e-29
Identities = 147/174 (84%), Gaps = 2/174 (1%)
Strand = Plus / Plus
Query: 60 tttgaccgtttgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttg 119
|||||||||| |||||||||||||||||| | ||| |||||||||||||||||||||
Sbjct: 51 tttgaccgttcgtcttattcaaaaaattttgacacttaataattcttttcctatcatttg 110
Query: 120 atttattgttaactatacttttatgtct--atatagttttacatatttcacaacagtttt 177
||| |||||||| |||| ||| |||| ||||| |||||||||||||| || ||||||
Sbjct: 111 attcattgttaaatatattttcatgtaggcatataattttacatatttcataaaagtttt 170
Query: 178 tgaaccaaacgaacggttaaacatgtttaaaaaagtcaacggcgtcaaatattt 231
|||| | |||||| || |||||||| ||||||||||||| |||||||||||
Sbjct: 171 tgaataagacgaacagtcaaacatgtgctaaaaagtcaacggtgtcaaatattt 224
Score = 50.1 bits (25), Expect = 8e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 186 acgaacggttaaacatgtttaaaaaagtcaacggcgtcaaa 226
||||||||| |||||||| ||||||||||||||||||||
Sbjct: 63 acgaacggtcaaacatgtaataaaaagtcaacggcgtcaaa 23
>49027_osa-miR806d:pmrd
Length = 271
Score = 125 bits (63), Expect = 2e-29
Identities = 147/174 (84%), Gaps = 2/174 (1%)
Strand = Plus / Plus
Query: 60 tttgaccgtttgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttg 119
||||||| || || ||||||||||||||||| |||||||| ||||||||| |||||||||
Sbjct: 65 tttgaccattcgttttattcaaaaaatttaaataattatttattcttttcatatcatttg 124
Query: 120 atttattgttaactatacttt--tatgtctatatagttttacatatttcacaacagtttt 177
||| |||||||| |||||||| |||| ||||||||||||||||||||||| ||||
Sbjct: 125 attcattgttaaatatactttcatatgcacatatagttttacatatttcacaattttttt 184
Query: 178 tgaaccaaacgaacggttaaacatgtttaaaaaagtcaacggcgtcaaatattt 231
||| | || |||||| |||||||| ||||||||||||| |||||| ||||
Sbjct: 185 agaataagactaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattt 238
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 9 atactccctccatctcaaaatgtttgacgccgttgac 45
||||||||||| | | |||||||||||| ||||||||
Sbjct: 255 atactccctccgttttaaaatgtttgacaccgttgac 219
>49024_osa-miR806a:pmrd
Length = 252
Score = 109 bits (55), Expect = 1e-24
Identities = 147/174 (84%), Gaps = 4/174 (2%)
Strand = Plus / Plus
Query: 60 tttgaccgtttgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttg 119
||||||| || ||||||||||||||||||||||||||||| ||||||||| || ||||||
Sbjct: 59 tttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcata-catttg 117
Query: 120 atttattgttaactatacttttatgt--ctatatagttttacatatttcacaacagtttt 177
||| |||||||| |||||||| |||| |||||||||||| ||||||| || | ||
Sbjct: 118 attcattgttaaatatactttcatgtacacatatagttttacgtatttcaaaaaaaaatt 177
Query: 178 tgaaccaaacgaacggttaaacatgtttaaaaaagtcaacggcgtcaaatattt 231
| || | |||||||||||||||||| ||||||||||||| |||||| ||||
Sbjct: 178 t-aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacattt 230
Score = 44.1 bits (22), Expect = 5e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 8 aatactccctccatctcaaaatgtttgacgccgttgac 45
|||||||||||| | | |||||||||||| ||||||||
Sbjct: 248 aatactccctccgttttaaaatgtttgacaccgttgac 211
>49030_osa-miR806g:pmrd
Length = 240
Score = 103 bits (52), Expect = 7e-23
Identities = 130/155 (83%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 79 caaaaaatttaagtaattattaattcttttcctatcatttgatttattgttaactatact 138
||||||| ||||||||||||| |||||||| |||||||||||| |||||||| ||||||
Sbjct: 70 caaaaaaattaagtaattatttattctttttatatcatttgattcattgttaaatatact 129
Query: 139 tttatgt--ctatatagttttacatatttcacaacagtttttgaaccaaacgaacggtta 196
|| |||| || |||||||||||||||||| | |||||||| | ||||||||| |
Sbjct: 130 ttcatgtacacatgtagttttacatatttcactaacttttttgaataagacgaacggtca 189
Query: 197 aacatgtttaaaaaagtcaacggcgtcaaatattt 231
||||||| ||||||||||||| |||||| ||||
Sbjct: 190 aacatgtgctaaaaagtcaacggtgtcaaacattt 224
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 10 tactccctccatctcaaaatgtttgacgccgttgac 45
|||||||||| | |||||||||||||| ||||||||
Sbjct: 240 tactccctccgtttcaaaatgtttgacaccgttgac 205
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 60 tttgaccgtttgtcttattcaaaaaa 85
|||||||||| |||||||||||||||
Sbjct: 191 tttgaccgttcgtcttattcaaaaaa 166
>49025_osa-miR806b:pmrd
Length = 215
Score = 95.6 bits (48), Expect = 2e-20
Identities = 91/103 (88%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 71 gtcttattcaaaa-aatttaagtaattattaattcttttcctatcatttgatttattgtt 129
||||||||||||| |||||||||||||||| |||||||| |||||||||||| ||||||
Sbjct: 49 gtcttattcaaaaaaatttaagtaattatttattctttttatatcatttgattcattgtt 108
Query: 130 aactatacttttatgt--ctatatagttttacatatttcacaa 170
|| |||||||| |||| ||||| |||||||||||||||||
Sbjct: 109 aaatatactttcatgtacacatataattttacatatttcacaa 151
>48794_oni-miR812:pmrd
Length = 172
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 60 tttgaccgtttgtcttattcaaaaaatttaagtaattat 98
||||||| || |||||||||||||| |||| ||||||||
Sbjct: 156 tttgaccattcgtcttattcaaaaactttatgtaattat 118
