miRNEST 2.0, an integrative microRNA resource :: BLAST
>49189_osa-miR1884a:pmrd
Length = 214
Score = 75.8 bits (38), Expect = 1e-14
Identities = 89/106 (83%)
Strand = Plus / Plus
Query: 117 atttgatgacgaatcaagtcacaataaaataaataataattacataaatgtttggaataa 176
||||||||| || ||||| |||||||||||||| ||| ||| |||| | ||| ||||||
Sbjct: 104 atttgatgataaaacaagttacaataaaataaatgatatttatataacttttttgaataa 163
Query: 177 gacgaatggttaaacgttggataaaaaatcaacggtgtcatacatt 222
|| ||||||| ||||||| ||||| ||||||||||||||||||
Sbjct: 164 gatgaatggtcaaacgttatgcaaaaagtcaacggtgtcatacatt 209
Score = 61.9 bits (31), Expect = 2e-10
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 18 aatgtatgacgccgttgactttttgaccaacgtttgaccattcgttttattcaaa 72
||||| ||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 5 aatgtgtgacgccgttgacttttcatacaacgtttgaccattcgtcttattcaaa 59
Score = 61.9 bits (31), Expect = 2e-10
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 18 aatgtatgacgccgttgactttttgaccaacgtttgaccattcgttttattcaaa 72
|||||||||| |||||||||||||| ||||||||||||||| | |||||||||
Sbjct: 209 aatgtatgacaccgttgactttttgcataacgtttgaccattcatcttattcaaa 155
Score = 56.0 bits (28), Expect = 1e-08
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 171 gaataagacgaatggttaaacgttggataaaaaatcaacggtgtcatacatt 222
|||||||||||||||| |||||||| || |||| ||||||| |||| |||||
Sbjct: 56 gaataagacgaatggtcaaacgttgtatgaaaagtcaacggcgtcacacatt 5
>48794_oni-miR812:pmrd
Length = 172
Score = 60.0 bits (30), Expect = 8e-10
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 142 aaaataaataataattacataaatgtttggaataagacgaatggttaaac 191
||||||||| ||||||||||||| ||| |||||||||||||||| ||||
Sbjct: 108 aaaataaattataattacataaagtttttgaataagacgaatggtcaaac 157
Score = 42.1 bits (21), Expect = 2e-04
Identities = 43/49 (87%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 49 gtttgaccattcgttttattcaaattttttgtgcaaatat-taaaatat 96
|||||||||||||||||||| ||| |||| || |||||| ||||||||
Sbjct: 16 gtttgaccattcgttttatttaaaaattttatgtaaatatataaaatat 64
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 49 gtttgaccattcgttttattcaaa 72
|||||||||||||| |||||||||
Sbjct: 157 gtttgaccattcgtcttattcaaa 134
>49031_osa-miR806h:pmrd
Length = 271
Score = 52.0 bits (26), Expect = 2e-07
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 150 taataattacataaatgtttggaataagacgaatggttaaacgttggataaaaaatcaac 209
|||||||||| ||||| ||| |||||||||||| ||| |||| | |||||||| |||||
Sbjct: 103 taataattacttaaattttttgaataagacgaacggtcaaacatatgataaaaagtcaac 44
Query: 210 gg 211
||
Sbjct: 43 gg 42
Score = 48.1 bits (24), Expect = 3e-06
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 171 gaataagacgaatggttaaacgttggataaaaaatcaacggtgtcatacatt 222
|||||||||||||||| |||| | | |||||| |||||||||||| |||||
Sbjct: 184 gaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 235
Score = 46.1 bits (23), Expect = 1e-05
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 18 aatgtatgacgccgttgactttttgaccaacgtttgaccattcgttttattcaaa 72
||||| |||| ||||||||||||| | | |||||||||||||| |||||||||
Sbjct: 235 aatgtttgacaccgttgactttttagcacatgtttgaccattcgtcttattcaaa 181
>49028_osa-miR806e:pmrd
Length = 255
Score = 50.1 bits (25), Expect = 8e-07
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 150 taataattacataaatgtttggaataagacgaatggttaaacgttggataaaaaatcaac 209
|||||||||| ||||| ||| |||||||||||| ||| |||| | | |||||| |||||
Sbjct: 98 taataattacttaaattttttgaataagacgaacggtcaaacatatgctaaaaagtcaac 39
Query: 210 ggtgtcatacatt 222
|| |||| |||||
Sbjct: 38 ggcgtcaaacatt 26
Score = 46.1 bits (23), Expect = 1e-05
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 18 aatgtatgacgccgttgactttttgaccaacgtttgaccattcgttttattcaaa 72
||||| |||||||||||||||||| | | |||||||| ||||| |||||||||
Sbjct: 26 aatgtttgacgccgttgactttttagcatatgtttgaccgttcgtcttattcaaa 80
>49026_osa-miR806c:pmrd
Length = 270
Score = 50.1 bits (25), Expect = 8e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 162 aaatgtttggaataagacgaatggttaaacgttggataaaaaatcaacggtgtcatacat 221
|||| ||| |||||||||||||||| |||| | | |||||| |||||||||||| ||||
Sbjct: 179 aaattttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtgtcaaacat 238
Query: 222 t 222
|
Sbjct: 239 t 239
Score = 46.1 bits (23), Expect = 1e-05
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 18 aatgtatgacgccgttgactttttgaccaacgtttgaccattcgttttattcaaa 72
||||| |||| ||||||||||||| | | |||||||||||||| |||||||||
Sbjct: 239 aatgtttgacaccgttgactttttagcacatgtttgaccattcgtcttattcaaa 185
Score = 44.1 bits (22), Expect = 5e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 151 aataattacataaatgtttggaataagacgaatg 184
||||||||| ||||| ||| ||||||||||||||
Sbjct: 106 aataattacttaaattttttgaataagacgaatg 73
>49024_osa-miR806a:pmrd
Length = 252
Score = 50.1 bits (25), Expect = 8e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 151 aataattacataaatgtttggaataagacgaatggttaaac 191
||||||||| ||||| ||| |||||||||||||||| ||||
Sbjct: 98 aataattacttaaattttttgaataagacgaatggtcaaac 58
Score = 46.1 bits (23), Expect = 1e-05
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 172 aataagacgaatggttaaacgttggataaaaaatcaacggtgtcatacatt 222
||||||||||| |||||||| | | |||||| |||||||||||| |||||
Sbjct: 179 aataagacgaacggttaaacatgtgctaaaaagtcaacggtgtcaaacatt 229
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 49 gtttgaccattcgttttattcaaa 72
|||||||||||||| |||||||||
Sbjct: 58 gtttgaccattcgtcttattcaaa 81
>49027_osa-miR806d:pmrd
Length = 271
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 49 gtttgaccattcgttttattcaaa 72
||||||||||||||||||||||||
Sbjct: 64 gtttgaccattcgttttattcaaa 87
>49071_osa-miR818e:pmrd
Length = 225
Score = 42.1 bits (21), Expect = 2e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 49 gtttgaccattcgttttattcaaattttttgtgcaaatattaaaa 93
||||||||| |||||||||||||| ||||| ||||||| ||||
Sbjct: 181 gtttgaccactcgttttattcaaaaaatttgtacaaatataaaaa 137
>49596_osa-miRf10381-akr:pmrd
Length = 147
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 172 aataagacgaatggttaaacgttggata 199
||||||||||| | ||||||||||||||
Sbjct: 71 aataagacgaacgtttaaacgttggata 44
>49030_osa-miR806g:pmrd
Length = 240
Score = 40.1 bits (20), Expect = 8e-04
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 171 gaataagacgaatggttaaacgttggataaaaaatcaacggtgtcatacatt 222
|||||||||||| ||| |||| | | |||||| |||||||||||| |||||
Sbjct: 172 gaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacatt 223
>49029_osa-miR806f:pmrd
Length = 241
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 aatgtatgacgccgttgacttttt 41
||||| ||||||||||||||||||
Sbjct: 19 aatgtttgacgccgttgacttttt 42
