miRNEST 2.0, an integrative microRNA resource :: BLAST
>48799_oru-miR806:pmrd
Length = 242
Score = 182 bits (92), Expect = 8e-47
Identities = 189/221 (85%), Gaps = 6/221 (2%)
Strand = Plus / Plus
Query: 16 aaaatgtttgacgccgttgacttttttcaaaaatatttgatcgttcgtcttatttaaaaa 75
||||| ||||||||||||||||||||| ||| |||||||| ||||||||||||| |||||
Sbjct: 17 aaaatatttgacgccgttgactttttt-aaatatatttgaccgttcgtcttattcaaaaa 75
Query: 76 a-tttaagtaattgttaannnnnnnnctatcatttgatttattgttaaatatacttttat 134
| ||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 76 aatttaagtaattaataattcctttcctatcatttgatttattgttaaatatacttttat 135
Query: 135 gtatacatatagttttacacatatcacaaaagtttttgaataaaacgaa----caaacat 190
|||||||||||||||| | || |||||||| ||||||||||| ||||| |||||||
Sbjct: 136 atatacatatagttttatatatttcacaaaaatttttgaataagacgaacggtcaaacat 195
Query: 191 gtttaaaaaagtcaacgatgtcaaacatttagggaatgagg 231
||||||||| |||||| |||||| |||||||||| ||||
Sbjct: 196 gtttaaaaatatcaacggcgtcaaatatttagggaaggagg 236
Score = 46.1 bits (23), Expect = 1e-05
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 17 aaatgtttgacgccgttgacttttttcaaaaatatttgatcgttcgtcttatttaaaaa 75
|||| |||||||||||||| ||||| ||| || ||||| ||||||||||||| |||||
Sbjct: 225 aaatatttgacgccgttgatattttt-aaacatgtttgaccgttcgtcttattcaaaaa 168
>49031_osa-miR806h:pmrd
Length = 271
Score = 157 bits (79), Expect = 5e-39
Identities = 178/211 (84%), Gaps = 7/211 (3%)
Strand = Plus / Plus
Query: 17 aaatgtttgacgccgttgacttttt-tcaaaaatatttgatcgttcgtcttatttaaaaa 75
|||||||| |||||||||||||||| ||| | | ||||| ||||||||||||| |||||
Sbjct: 30 aaatgtttaacgccgttgactttttatcata--tgtttgaccgttcgtcttattcaaaaa 87
Query: 76 atttaagtaattgttaannnnnnnnctatcatttgatttattgttaaatatacttttatg 135
|||||||||||| |||| ||||||||||||| ||||||||||||| |||||||
Sbjct: 88 atttaagtaattattaattcttttcctatcatttgattcattgttaaatatatttttatg 147
Query: 136 tatacatatagttttacacatatcacaaaagtttttgaataaaacgaa----caaacatg 191
|| |||||| ||||||| || |||||||||||||||||||| ||||| ||||||||
Sbjct: 148 taggcatataattttacatatctcacaaaagtttttgaataagacgaatggtcaaacatg 207
Query: 192 tttaaaaaagtcaacgatgtcaaacatttag 222
| |||||||||||| ||||||||||||||
Sbjct: 208 tgctaaaaagtcaacggtgtcaaacatttag 238
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 17 aaatgtttgacgccgttgacttttt 41
||||||||||| |||||||||||||
Sbjct: 236 aaatgtttgacaccgttgacttttt 212
>49028_osa-miR806e:pmrd
Length = 255
Score = 135 bits (68), Expect = 2e-32
Identities = 173/209 (82%), Gaps = 5/209 (2%)
Strand = Plus / Plus
Query: 16 aaaatgtttgacgccgttgacttttttcaaaaatatttgatcgttcgtcttatttaaaaa 75
|||||||||||||||||||||||||| | | | ||||| ||||||||||||| |||||
Sbjct: 24 aaaatgtttgacgccgttgactttttagcata-tgtttgaccgttcgtcttattcaaaaa 82
Query: 76 atttaagtaattgttaannnnnnnnctatcatttgatttattgttaaatatacttttatg 135
|||||||||||| |||| |||||||| ||||||||||||||||| |||||||
Sbjct: 83 atttaagtaattattaattcttttcttatcatttaatttattgttaaatatatttttatg 142
Query: 136 tatacatatagttttacacatatcacaaaagtttttgaataaaacgaa----caaacatg 191
|| |||||| ||||||| || |||||||||||||| ||||| ||||| ||||||||
Sbjct: 143 taggcatataattttacatatttcacaaaagtttttaaataagacgaacggtcaaacatg 202
Query: 192 tttaaaaaagtcaacgatgtcaaacattt 220
| |||||||||||| ||||||| ||||
Sbjct: 203 tgctaaaaagtcaacggtgtcaaatattt 231
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 51 tttgatcgttcgtcttatttaaaaa 75
||||| |||||||||||||||||||
Sbjct: 198 tttgaccgttcgtcttatttaaaaa 174
>49026_osa-miR806c:pmrd
Length = 270
Score = 135 bits (68), Expect = 2e-32
Identities = 173/209 (82%), Gaps = 5/209 (2%)
Strand = Plus / Plus
Query: 16 aaaatgtttgacgccgttgacttttttcaaaaatatttgatcgttcgtcttatttaaaaa 75
|||||||||||| ||||||||||||| | ||||||||| ||||||||||| |||||
Sbjct: 33 aaaatgtttgacaccgttgactttttagtacg-tatttgatcattcgtcttattcaaaaa 91
Query: 76 atttaagtaattgttaannnnnnnnctatcatttgatttattgttaaatatacttttatg 135
|||||||||||| || | |||| ||||||||||||||||||||||||| |||
Sbjct: 92 atttaagtaattatttatttttttcatatcgtttgatttattgttaaatatactttcatg 151
Query: 136 tatacatatagttttacacatatcacaaaagtttttgaataaaacgaa----caaacatg 191
|| ||||||||||||||| || ||| |||| ||||||||||| ||||| ||||||||
Sbjct: 152 tacacatatagttttacatatttcataaaattttttgaataagacgaatggtcaaacatg 211
Query: 192 tttaaaaaagtcaacgatgtcaaacattt 220
| |||||||||||| ||||||||||||
Sbjct: 212 tgctaaaaagtcaacggtgtcaaacattt 240
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 196 aaaaagtcaacgatgtcaaacattt 220
|||||||||||| ||||||||||||
Sbjct: 58 aaaaagtcaacggtgtcaaacattt 34
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 17 aaatgtttgacgccgttgacttttt 41
||||||||||| |||||||||||||
Sbjct: 240 aaatgtttgacaccgttgacttttt 216
>49030_osa-miR806g:pmrd
Length = 240
Score = 99.6 bits (50), Expect = 9e-22
Identities = 105/123 (85%), Gaps = 4/123 (3%)
Strand = Plus / Plus
Query: 102 tatcatttgatttattgttaaatatacttttatgtatacatatagttttacacatatcac 161
|||||||||||| ||||||||||||||||| ||||| |||| |||||||||| || ||||
Sbjct: 102 tatcatttgattcattgttaaatatactttcatgtacacatgtagttttacatatttcac 161
Query: 162 aaaagtttttgaataaaacgaa----caaacatgtttaaaaaagtcaacgatgtcaaaca 217
|| ||||||||||| ||||| ||||||||| |||||||||||| |||||||||
Sbjct: 162 taacttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 221
Query: 218 ttt 220
|||
Sbjct: 222 ttt 224
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 aaaatgtttgacgccgttgacttttt 41
|||||||||||| |||||||||||||
Sbjct: 225 aaaatgtttgacaccgttgacttttt 200
>49029_osa-miR806f:pmrd
Length = 241
Score = 93.7 bits (47), Expect = 6e-20
Identities = 105/124 (84%), Gaps = 4/124 (3%)
Strand = Plus / Plus
Query: 101 ctatcatttgatttattgttaaatatacttttatgtatacatatagttttacacatatca 160
||||||||||||| ||||||||||||| ||| ||||| |||||| ||||||| || |||
Sbjct: 101 ctatcatttgattcattgttaaatatattttcatgtaggcatataattttacatatttca 160
Query: 161 caaaagtttttgaataaaacgaa----caaacatgtttaaaaaagtcaacgatgtcaaac 216
|||||||||||||||| ||||| ||||||||| |||||||||||| |||||||
Sbjct: 161 taaaagtttttgaataagacgaacagtcaaacatgtgctaaaaagtcaacggtgtcaaat 220
Query: 217 attt 220
||||
Sbjct: 221 attt 224
>49025_osa-miR806b:pmrd
Length = 215
Score = 87.7 bits (44), Expect = 4e-18
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 102 tatcatttgatttattgttaaatatacttttatgtatacatatagttttacacatatcac 161
|||||||||||| ||||||||||||||||| ||||| ||||||| ||||||| || ||||
Sbjct: 90 tatcatttgattcattgttaaatatactttcatgtacacatataattttacatatttcac 149
Query: 162 aaaagtttttgaataaaacgaaca 185
||| ||||| ||||| |||||||
Sbjct: 150 aaattttttttaataagacgaaca 173
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 196 aaaaagtcaacgatgtcaaacattt 220
|||||||||||| ||||||||||||
Sbjct: 28 aaaaagtcaacggtgtcaaacattt 4
>49024_osa-miR806a:pmrd
Length = 252
Score = 81.8 bits (41), Expect = 2e-16
Identities = 112/137 (81%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 16 aaaatgtttgacgccgttgacttttttcaaaaatatttgatcgttcgtcttatttaaaaa 75
|||||||||||| ||||||||||||| | | | ||||| | ||||||||||| |||||
Sbjct: 24 aaaatgtttgacaccgttgactttttaaatacgtgtttgaccattcgtcttattcaaaaa 83
Query: 76 atttaagtaattgttaannnnnnnnctatcatttgatttattgttaaatatacttttatg 135
|||||||||||| || | || ||||||||| ||||||||||||||||| |||
Sbjct: 84 atttaagtaattatttattcttttcata-catttgattcattgttaaatatactttcatg 142
Query: 136 tatacatatagttttac 152
|| ||||||||||||||
Sbjct: 143 tacacatatagttttac 159
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 taaaatgtttgacgccgttgacttttt 41
||||||||||||| |||||||||||||
Sbjct: 232 taaaatgtttgacaccgttgacttttt 206
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 196 aaaaagtcaacgatgtcaaacattt 220
|||||||||||| ||||||||||||
Sbjct: 49 aaaaagtcaacggtgtcaaacattt 25
>49027_osa-miR806d:pmrd
Length = 271
Score = 75.8 bits (38), Expect = 1e-14
Identities = 102/123 (82%), Gaps = 4/123 (3%)
Strand = Plus / Plus
Query: 102 tatcatttgatttattgttaaatatacttttatgtatacatatagttttacacatatcac 161
|||||||||||| ||||||||||||||||| || | ||||||||||||||| || ||||
Sbjct: 116 tatcatttgattcattgttaaatatactttcatatgcacatatagttttacatatttcac 175
Query: 162 aaaagtttttgaataa----aacgaacaaacatgtttaaaaaagtcaacgatgtcaaaca 217
|| |||| |||||| |||| ||||||||| |||||||||||| |||||||||
Sbjct: 176 aatttttttagaataagactaacggtcaaacatgtgctaaaaagtcaacggtgtcaaaca 235
Query: 218 ttt 220
|||
Sbjct: 236 ttt 238
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 taaaatgtttgacgccgttgacttttt 41
||||||||||||| |||||||||||||
Sbjct: 240 taaaatgtttgacaccgttgacttttt 214
>49189_osa-miR1884a:pmrd
Length = 214
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 16 aaaatgtttgacgccgttgactttt 40
||||||| |||||||||||||||||
Sbjct: 3 aaaatgtgtgacgccgttgactttt 27
>49048_osa-miR812a:pmrd
Length = 234
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 tttgatcgttcgtcttatttaaaaa 75
|||||||||||||||||||| ||||
Sbjct: 48 tttgatcgttcgtcttatttgaaaa 72
