miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00075;mir-166;AP008208.1/26148565-26148667 39947:Oryza sativa
Japonica Group
Length = 103
Score = 204 bits (103), Expect = 2e-52
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgaggtgcatggagaaacctctgatcgatcaggtttg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcgaggtgcatggagaaacctctgatcgatcaggtttg 60
Query: 65 atctgtagagactgatctcggaccaggcttcattcccctcaag 107
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctgtagagactgatctcggaccaggcttcattcccctcaag 103
>RF00075;mir-166;EU956093.1/113-209 4577:Zea mays
Length = 97
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgaggtgca 36
||||||||||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcgaggtgca 32
Score = 60.0 bits (30), Expect = 6e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 78 gatctcggaccaggcttcattcccctcaag 107
||||||||||||||||||||||||||||||
Sbjct: 68 gatctcggaccaggcttcattcccctcaag 97
>RF00075;mir-166;ABXC01002952.1/108749-108653 4558:Sorghum bicolor
(sorghum)
Length = 97
Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgaggtgca 36
||||||||||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcgaggtgca 32
Score = 61.9 bits (31), Expect = 2e-09
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcccctcaag 107
|||||||||||||||||||||||||||||||
Sbjct: 67 tgatctcggaccaggcttcattcccctcaag 97
>RF00075;mir-166;ABIM01012777.1/4514-4390 3649:Carica papaya
(papaya)
Length = 125
Score = 60.0 bits (30), Expect = 6e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcccctcaa 106
||||||||||||||||||||||||||||||
Sbjct: 95 tgatctcggaccaggcttcattcccctcaa 124
>RF00075;mir-166;AARH01000156.1/300448-300294 3694:Populus
trichocarpa
Length = 155
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgaggt 33
|||||||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcgaggt 29
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcccc 102
|||| |||||||||||||||||||||
Sbjct: 125 tgatgtcggaccaggcttcattcccc 150
>RF00075;mir-166;AASG02002547.1/1046-1166 3988:Ricinus communis
(castor bean)
Length = 121
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgaggt 33
|||||||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcgaggt 29
>RF00075;mir-166;AC235255.1/12904-12739 3847:Glycine max (soybean)
Length = 166
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 72 gagactgatctcggaccaggcttcattcc 100
|||||||||||||||||||||||||||||
Sbjct: 131 gagactgatctcggaccaggcttcattcc 159
>RF00075;mir-166;AC226041.1/11826-11708 4641:Musa acuminata
Length = 119
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 78 gatctcggaccaggcttcattcccctcaa 106
|||||||||||||||||||||||||||||
Sbjct: 90 gatctcggaccaggcttcattcccctcaa 118
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgagg 32
||||||||||||||||||||| ||||||
Sbjct: 1 tttgaggggaatgttgtctgggtcgagg 28
>RF00075;mir-166;ABIM01020443.1/6232-6097 3649:Carica papaya
(papaya)
Length = 136
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgagg 32
||||||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcgagg 28
>RF00075;mir-166;AARH01006070.1/215270-215403 3694:Populus
trichocarpa
Length = 134
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgagg 32
||||||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcgagg 28
>RF00075;mir-166;AARH01001165.1/83261-83385 3694:Populus
trichocarpa
Length = 125
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgagg 32
||||||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcgagg 28
>RF00075;mir-166;AASG02010073.1/7999-8131 3988:Ricinus communis
(castor bean)
Length = 133
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgagg 32
||||||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcgagg 28
>RF00075;mir-166;AC144592.26/52711-52605 3880:Medicago truncatula
(barrel medic)
Length = 107
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgagg 32
||||||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcgagg 28
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 80 tctcggaccaggcttcattcccc 102
|||||||||||||||||||||||
Sbjct: 80 tctcggaccaggcttcattcccc 102
>RF00075;mir-166;BABK01006649.1/1239-1127 34305:Lotus japonicus
Length = 113
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgagg 32
||||||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcgagg 28
>RF00075;mir-166;AP009261.1/72240-72093 4081:Solanum lycopersicum
Length = 148
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 6 ttgaggggaatgttgtctggctcgaggt 33
||||||||||||||||||||||||||||
Sbjct: 2 ttgaggggaatgttgtctggctcgaggt 29
>RF00075;mir-166;AM468140.2/16750-16595 29760:Vitis vinifera
Length = 156
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgagg 32
||||||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcgagg 28
>RF00075;mir-166;CAAP02000145.1/77043-77192 29760:Vitis vinifera
Length = 150
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgagg 32
||||||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcgagg 28
>RF00075;mir-166;EU945393.1/89-202 4577:Zea mays
Length = 114
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 78 gatctcggaccaggcttcattcccctca 105
||||||||||||||||||||||||||||
Sbjct: 85 gatctcggaccaggcttcattcccctca 112
>RF00075;mir-166;AY501432.1/1-122 4577:Zea mays
Length = 122
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 78 gatctcggaccaggcttcattcccctca 105
||||||||||||||||||||||||||||
Sbjct: 95 gatctcggaccaggcttcattcccctca 122
>RF00075;mir-166;ABXC01000193.1/181030-180913 4558:Sorghum bicolor
(sorghum)
Length = 118
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 78 gatctcggaccaggcttcattcccctca 105
||||||||||||||||||||||||||||
Sbjct: 89 gatctcggaccaggcttcattcccctca 116
>RF00075;mir-166;AAAA02030332.1/11899-12019 39946:Oryza sativa
Indica Group
Length = 121
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 78 gatctcggaccaggcttcattcccctca 105
||||||||||||||||||||||||||||
Sbjct: 92 gatctcggaccaggcttcattcccctca 119
>RF00075;mir-166;EU548914.1/298-397 3702:Arabidopsis thaliana (thale
cress)
Length = 100
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 tctcggaccaggcttcattcccctcaa 106
|||||||||||||||||||||||||||
Sbjct: 73 tctcggaccaggcttcattcccctcaa 99
>RF00075;mir-166;AC148487.14/34671-34762 3880:Medicago truncatula
(barrel medic)
Length = 92
Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 72 gagactgatctcggaccaggcttcattcccc 102
|||| ||||||||||||||||||||||||||
Sbjct: 57 gagaatgatctcggaccaggcttcattcccc 87
>RF00075;mir-166;AY599420.1/1-185 4096:Nicotiana sylvestris (wood
tobacco)
Length = 185
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 7 tgaggggaatgttgtctggctcgaggt 33
|||||||||||||||||||||||||||
Sbjct: 1 tgaggggaatgttgtctggctcgaggt 27
>RF00075;mir-166;AM464541.1/10325-10481 29760:Vitis vinifera
Length = 157
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 tctcggaccaggcttcattcccctcaa 106
|||||||||||||||||||||||||||
Sbjct: 130 tctcggaccaggcttcattcccctcaa 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 ttgaggggaatgttgtctggctcgaggt 33
||||| ||||||||||||||||||||||
Sbjct: 2 ttgagaggaatgttgtctggctcgaggt 29
>RF00075;mir-166;ABXC01000331.1/255164-255261 4558:Sorghum bicolor
(sorghum)
Length = 98
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 tctcggaccaggcttcattcccctcaa 106
|||||||||||||||||||||||||||
Sbjct: 71 tctcggaccaggcttcattcccctcaa 97
>RF00075;mir-166;AC027660.2/136704-136618 39947:Oryza sativa
Japonica Group
Length = 87
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 tctcggaccaggcttcattcccctcaa 106
|||||||||||||||||||||||||||
Sbjct: 60 tctcggaccaggcttcattcccctcaa 86
>RF00075;mir-166;AAAA02029560.1/62131-62045 39946:Oryza sativa
Indica Group
Length = 87
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 80 tctcggaccaggcttcattcccctcaa 106
|||||||||||||||||||||||||||
Sbjct: 60 tctcggaccaggcttcattcccctcaa 86
>RF00075;mir-166;ABIM01018276.1/2199-2062 3649:Carica papaya
(papaya)
Length = 138
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcccctcaa 106
||||||||||||||||||||||||| ||||
Sbjct: 108 tgatctcggaccaggcttcattcccgtcaa 137
>RF00075;mir-166;EU548911.1/166-263 3702:Arabidopsis thaliana (thale
cress)
Length = 98
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcccctcaa 106
|||| |||||||||||||||||||||||||
Sbjct: 68 tgatgtcggaccaggcttcattcccctcaa 97
>RF00075;mir-166;EU548905.1/187-287 3702:Arabidopsis thaliana (thale
cress)
Length = 101
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcccctcaa 106
|||| |||||||||||||||||||||||||
Sbjct: 71 tgatgtcggaccaggcttcattcccctcaa 100
>RF00075;mir-166;AARH01005662.1/95261-95577 3694:Populus trichocarpa
Length = 317
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 actgatctcggaccaggcttcattcc 100
||||||||||||||||||||||||||
Sbjct: 285 actgatctcggaccaggcttcattcc 310
>RF00075;mir-166;AARH01006305.1/50528-50441 3694:Populus trichocarpa
Length = 88
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 81 ctcggaccaggcttcattcccctcaa 106
||||||||||||||||||||||||||
Sbjct: 62 ctcggaccaggcttcattcccctcaa 87
>RF00075;mir-166;AARH01003608.1/24010-23917 3694:Populus trichocarpa
Length = 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcccc 102
||||||||||||||||||||||||||
Sbjct: 64 tgatctcggaccaggcttcattcccc 89
>RF00075;mir-166;AARH01009662.1/134102-134198 3694:Populus
trichocarpa
Length = 97
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 80 tctcggaccaggcttcattcccctca 105
||||||||||||||||||||||||||
Sbjct: 70 tctcggaccaggcttcattcccctca 95
>RF00075;mir-166;AARH01004299.1/36070-36161 3694:Populus trichocarpa
Length = 92
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcccc 102
||||||||||||||||||||||||||
Sbjct: 62 tgatctcggaccaggcttcattcccc 87
>RF00075;mir-166;AC209184.1/141607-141700 3694:Populus trichocarpa
Length = 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 81 ctcggaccaggcttcattcccctcaa 106
||||||||||||||||||||||||||
Sbjct: 68 ctcggaccaggcttcattcccctcaa 93
>RF00075;mir-166;AASG02003618.1/9737-9830 3988:Ricinus communis
(castor bean)
Length = 94
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcccc 102
||||||||||||||||||||||||||
Sbjct: 64 tgatctcggaccaggcttcattcccc 89
>RF00075;mir-166;CAAP02000553.1/130979-130890 29760:Vitis vinifera
Length = 90
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcccctcaa 106
|||| |||||||||||||||||||||||||
Sbjct: 60 tgatttcggaccaggcttcattcccctcaa 89
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 ttgaggggaatgttgtctggctcgag 31
|||||||||||||||||||| |||||
Sbjct: 2 ttgaggggaatgttgtctggttcgag 27
>RF00075;mir-166;CAAP02000526.1/74430-74281 29760:Vitis vinifera
Length = 150
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 81 ctcggaccaggcttcattcccctcaa 106
||||||||||||||||||||||||||
Sbjct: 124 ctcggaccaggcttcattcccctcaa 149
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgagg 32
|||||||||| |||||||||||||||||
Sbjct: 1 tttgaggggattgttgtctggctcgagg 28
>RF00075;mir-166;AM448542.2/4591-4502 29760:Vitis vinifera
Length = 90
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcccc 102
||||||||||||||||||||||||||
Sbjct: 60 tgatctcggaccaggcttcattcccc 85
>RF00075;mir-166;ABIM01027778.1/12902-13001 3649:Carica papaya
(papaya)
Length = 100
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccctcaa 106
|||||||||||||||||||||||||
Sbjct: 75 tcggaccaggcttcattcccctcaa 99
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 ttgaggggaatgttgtctggctcgagg 32
||||||||||||||| |||||||||||
Sbjct: 2 ttgaggggaatgttggctggctcgagg 28
>RF00075;mir-166;AC232546.1/61469-61348 51351:Brassica rapa subsp.
pekinensis
Length = 122
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccctcaa 106
|||||||||||||||||||||||||
Sbjct: 97 tcggaccaggcttcattcccctcaa 121
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgagg 32
|||||||||||||||||||||| |||||
Sbjct: 1 tttgaggggaatgttgtctggcacgagg 28
>RF00075;mir-166;AC189591.2/50508-50400 51351:Brassica rapa subsp.
pekinensis
Length = 109
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccctcaa 106
|||||||||||||||||||||||||
Sbjct: 84 tcggaccaggcttcattcccctcaa 108
>RF00075;mir-166;AB016871.1/77005-76861 3702:Arabidopsis thaliana
(thale cress)
Length = 145
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccctcaa 106
|||||||||||||||||||||||||
Sbjct: 120 tcggaccaggcttcattcccctcaa 144
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgagg 32
|||||||||||||||||||||| |||||
Sbjct: 1 tttgaggggaatgttgtctggcacgagg 28
>RF00075;mir-166;AC216447.1/33512-33607 3694:Populus trichocarpa
Length = 96
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccctcaa 106
|||||||||||||||||||||||||
Sbjct: 71 tcggaccaggcttcattcccctcaa 95
>RF00075;mir-166;AC140029.19/70272-70377 3880:Medicago truncatula
(barrel medic)
Length = 106
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccctcaa 106
|||||||||||||||||||||||||
Sbjct: 81 tcggaccaggcttcattcccctcaa 105
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgagg 32
|||||||||||||||| |||||||||||
Sbjct: 1 tttgaggggaatgttggctggctcgagg 28
>RF00075;mir-166;CU302248.6/62232-62044 3880:Medicago truncatula
(barrel medic)
Length = 189
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccctcaa 106
|||||||||||||||||||||||||
Sbjct: 164 tcggaccaggcttcattcccctcaa 188
>RF00075;mir-166;AC148816.3/87512-87332 3880:Medicago truncatula
(barrel medic)
Length = 181
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 72 gagactgatctcggaccaggcttcattcc 100
|||| ||||||||||||||||||||||||
Sbjct: 146 gagagtgatctcggaccaggcttcattcc 174
>RF00075;mir-166;BABK01014008.1/1570-1448 34305:Lotus japonicus
Length = 123
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccctcaa 106
|||||||||||||||||||||||||
Sbjct: 98 tcggaccaggcttcattcccctcaa 122
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 ttgaggggaatgttgtctggctcgagg 32
||||||||||||||| |||||||||||
Sbjct: 2 ttgaggggaatgttggctggctcgagg 28
>RF00075;mir-166;BABK01039514.1/607-703 34305:Lotus japonicus
Length = 97
Score = 50.1 bits (25), Expect = 6e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcccctca 105
|||| ||||||||||||||||||||||||
Sbjct: 67 tgatttcggaccaggcttcattcccctca 95
>RF00075;mir-166;CAAP02001545.1/66166-66077 29760:Vitis vinifera
Length = 90
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccctcaa 106
|||||||||||||||||||||||||
Sbjct: 65 tcggaccaggcttcattcccctcaa 89
>RF00075;mir-166;FJ010939.2/353-450 52838:Musa balbisiana
Length = 98
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 aggggaatgttgtctggctcgaggt 33
|||||||||||||||||||||||||
Sbjct: 5 aggggaatgttgtctggctcgaggt 29
>RF00075;mir-166;AY501431.1/1-212 4577:Zea mays
Length = 212
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 78 gatctcggaccaggcttcattcccc 102
|||||||||||||||||||||||||
Sbjct: 185 gatctcggaccaggcttcattcccc 209
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 tgaggggaatgttgtctggctcg 29
|||||||||||||||||||||||
Sbjct: 1 tgaggggaatgttgtctggctcg 23
>RF00075;mir-166;ABXC01006910.1/39676-39486 4558:Sorghum bicolor
(sorghum)
Length = 191
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcg 29
|||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcg 25
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 78 gatctcggaccaggcttcattcccc 102
|||||||||||||||||||||||||
Sbjct: 162 gatctcggaccaggcttcattcccc 186
>RF00075;mir-166;ABXC01000758.1/126828-126715 4558:Sorghum bicolor
(sorghum)
Length = 114
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 ctcggaccaggcttcattcccctca 105
|||||||||||||||||||||||||
Sbjct: 88 ctcggaccaggcttcattcccctca 112
>RF00075;mir-166;AK251614.1/146-305 112509:Hordeum vulgare subsp.
vulgare (domesticated barley)
Length = 160
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcg 29
|||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcg 25
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 78 gatctcggaccaggcttcattcccc 102
|||||||||||||||||||||||||
Sbjct: 131 gatctcggaccaggcttcattcccc 155
>RF00075;mir-166;AAAA02020902.1/104196-104017 39946:Oryza sativa
Indica Group
Length = 180
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcg 29
|||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcg 25
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 78 gatctcggaccaggcttcattcccc 102
|||||||||||||||||||||||||
Sbjct: 151 gatctcggaccaggcttcattcccc 175
>RF00075;mir-166;AP003614.2/6887-6709 39947:Oryza sativa Japonica
Group
Length = 179
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcg 29
|||||||||||||||||||||||||
Sbjct: 1 tttgaggggaatgttgtctggctcg 25
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 78 gatctcggaccaggcttcattcccc 102
|||||||||||||||||||||||||
Sbjct: 150 gatctcggaccaggcttcattcccc 174
>RF00075;mir-166;ABEU01001509.1/37358-37431 145481:Physcomitrella
patens subsp. patens
Length = 74
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 ctcggaccaggcttcattcccctca 105
|||||||||||||||||||||||||
Sbjct: 48 ctcggaccaggcttcattcccctca 72
>RF00075;mir-166;ABIM01027778.1/13122-13246 3649:Carica papaya
(papaya)
Length = 125
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 ttgaggggaatgttgtctggctcgaggt 33
||||| ||||||||||||||||||||||
Sbjct: 2 ttgagaggaatgttgtctggctcgaggt 29
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 80 tctcggaccaggcttcattcccc 102
|||||||||||||||||||||||
Sbjct: 98 tctcggaccaggcttcattcccc 120
>RF00075;mir-166;EU548832.1/235-380 3702:Arabidopsis thaliana
(thale cress)
Length = 146
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgagg 32
|||||||||| |||||||||||||||||
Sbjct: 1 tttgaggggactgttgtctggctcgagg 28
>RF00075;mir-166;EU548853.1/145-266 3702:Arabidopsis thaliana
(thale cress)
Length = 122
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgagg 32
|||||||||| |||||||||||||||||
Sbjct: 1 tttgaggggactgttgtctggctcgagg 28
>RF00075;mir-166;AARH01003279.1/141842-141699 3694:Populus
trichocarpa
Length = 144
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 ttgaggggaatgttgtctggctcgaggt 33
||||| ||||||||||||||||||||||
Sbjct: 2 ttgagaggaatgttgtctggctcgaggt 29
>RF00075;mir-166;AARH01007982.1/90633-90310 3694:Populus trichocarpa
Length = 324
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcc 100
||||||||||||||||||||||||
Sbjct: 294 tgatctcggaccaggcttcattcc 317
>RF00075;mir-166;AC140029.19/70482-70585 3880:Medicago truncatula
(barrel medic)
Length = 104
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 79 atctcggaccaggcttcattcccc 102
||||||||||||||||||||||||
Sbjct: 76 atctcggaccaggcttcattcccc 99
>RF00075;mir-166;CAAP02007291.1/14711-14590 29760:Vitis vinifera
Length = 122
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcc 100
||||||||||||||||||||||||
Sbjct: 92 tgatctcggaccaggcttcattcc 115
>RF00075;mir-166;AM485267.2/15969-16057 29760:Vitis vinifera
Length = 89
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 tttgaggggaatgttgtctggctcgagg 32
|||||||||||||||| |||||||||||
Sbjct: 1 tttgaggggaatgttggctggctcgagg 28
>RF00075;mir-166;ABEU01002487.1/1609-1703 145481:Physcomitrella
patens subsp. patens
Length = 95
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccctca 105
||||||||||||||||||||||||
Sbjct: 70 tcggaccaggcttcattcccctca 93
>RF00075;mir-166;ABEU01002053.1/8010-8104 145481:Physcomitrella
patens subsp. patens
Length = 95
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccctca 105
||||||||||||||||||||||||
Sbjct: 70 tcggaccaggcttcattcccctca 93
>RF00075;mir-166;ABEU01003209.1/178750-178656 145481:Physcomitrella
patens subsp. patens
Length = 95
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccctca 105
||||||||||||||||||||||||
Sbjct: 70 tcggaccaggcttcattcccctca 93
>RF00075;mir-166;ABEU01002839.1/114707-114612 145481:Physcomitrella
patens subsp. patens
Length = 96
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccctca 105
||||||||||||||||||||||||
Sbjct: 71 tcggaccaggcttcattcccctca 94
>RF00075;mir-166;DQ908436.1/479-591 3635:Gossypium hirsutum (upland
cotton)
Length = 113
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 gatctcggaccaggcttcattcc 100
|||||||||||||||||||||||
Sbjct: 84 gatctcggaccaggcttcattcc 106
>RF00075;mir-166;AC189313.2/128870-128784 51351:Brassica rapa subsp.
pekinensis
Length = 87
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 80 tctcggaccaggcttcattcccc 102
|||||||||||||||||||||||
Sbjct: 60 tctcggaccaggcttcattcccc 82
>RF00075;mir-166;AL590346.1/40100-40217 3702:Arabidopsis thaliana
(thale cress)
Length = 118
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 80 tctcggaccaggcttcattcccc 102
|||||||||||||||||||||||
Sbjct: 91 tctcggaccaggcttcattcccc 113
>RF00075;mir-166;EU548871.1/183-293 3702:Arabidopsis thaliana (thale
cress)
Length = 111
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 80 tctcggaccaggcttcattcccc 102
|||||||||||||||||||||||
Sbjct: 84 tctcggaccaggcttcattcccc 106
>RF00075;mir-166;EU548781.1/288-178 3702:Arabidopsis thaliana
(thale cress)
Length = 111
Score = 46.1 bits (23), Expect = 9e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 ttgaggggaatgttgtctggctcgagg 32
|||||||||||||||||||| ||||||
Sbjct: 2 ttgaggggaatgttgtctggatcgagg 28
>RF00075;mir-166;AASG02003407.1/927-777 3988:Ricinus communis
(castor bean)
Length = 151
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 81 ctcggaccaggcttcattcccct 103
|||||||||||||||||||||||
Sbjct: 125 ctcggaccaggcttcattcccct 147
>RF00075;mir-166;AY664413.1/238586-238494 4577:Zea mays
Length = 93
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 80 tctcggaccaggcttcattcccc 102
|||||||||||||||||||||||
Sbjct: 66 tctcggaccaggcttcattcccc 88
>RF00075;mir-166;AP008218.1/18370254-18370388 39947:Oryza sativa
Japonica Group
Length = 135
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 gatctcggaccaggcttcattcc 100
|||||||||||||||||||||||
Sbjct: 106 gatctcggaccaggcttcattcc 128
>RF00075;mir-166;ABEU01001509.1/36651-36730 145481:Physcomitrella
patens subsp. patens
Length = 80
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccctc 104
|||||||||||||||||||||||
Sbjct: 55 tcggaccaggcttcattcccctc 77
>RF00075;mir-166;ABEU01001509.1/36829-36913 145481:Physcomitrella
patens subsp. patens
Length = 85
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccctc 104
|||||||||||||||||||||||
Sbjct: 60 tcggaccaggcttcattcccctc 82
>RF00075;mir-166;ABIM01012128.1/12128-12036 3649:Carica papaya
(papaya)
Length = 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcccc 102
|||| |||||||||||||||||||||
Sbjct: 63 tgatttcggaccaggcttcattcccc 88
>RF00075;mir-166;AARH01001058.1/130278-130374 3694:Populus
trichocarpa
Length = 97
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcccc 102
|||| |||||||||||||||||||||
Sbjct: 67 tgatttcggaccaggcttcattcccc 92
>RF00075;mir-166;AASG02007713.1/11405-11313 3988:Ricinus communis
(castor bean)
Length = 93
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 77 tgatctcggaccaggcttcattcccc 102
|||| |||||||||||||||||||||
Sbjct: 63 tgatttcggaccaggcttcattcccc 88
>RF00075;mir-166;AC155889.2/42101-41932 3880:Medicago truncatula
(barrel medic)
Length = 170
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 atctcggaccaggcttcattcc 100
||||||||||||||||||||||
Sbjct: 142 atctcggaccaggcttcattcc 163
>RF00075;mir-166;BABK01008352.1/1692-1590 34305:Lotus japonicus
Length = 103
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 80 tctcggaccaggcttcattccc 101
||||||||||||||||||||||
Sbjct: 76 tctcggaccaggcttcattccc 97
>RF00075;mir-166;BABK01014008.1/1327-1223 34305:Lotus japonicus
Length = 105
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 ctcggaccaggcttcattcccc 102
||||||||||||||||||||||
Sbjct: 79 ctcggaccaggcttcattcccc 100
>RF00075;mir-166;AP008209.1/744073-744201 39947:Oryza sativa
Japonica Group
Length = 129
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 80 tctcggaccaggcttcattcccctca 105
||||| ||||||||||||||||||||
Sbjct: 102 tctcgaaccaggcttcattcccctca 127
>RF00075;mir-166;ABEU01015165.1/9230-9152 145481:Physcomitrella
patens subsp. patens
Length = 79
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccct 103
||||||||||||||||||||||
Sbjct: 54 tcggaccaggcttcattcccct 75
>RF00075;mir-166;ABEU01008046.1/36531-36607 145481:Physcomitrella
patens subsp. patens
Length = 77
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 tcggaccaggcttcattcccct 103
||||||||||||||||||||||
Sbjct: 52 tcggaccaggcttcattcccct 73
>RF00075;mir-166;ABEU01008046.1/36699-36780 145481:Physcomitrella
patens subsp. patens
Length = 82
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 cggaccaggcttcattcccctc 104
||||||||||||||||||||||
Sbjct: 58 cggaccaggcttcattcccctc 79
>RF00075;mir-166;ABEU01005077.1/22634-22717 145481:Physcomitrella
patens subsp. patens
Length = 84
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 83 cggaccaggcttcattcccctc 104
||||||||||||||||||||||
Sbjct: 60 cggaccaggcttcattcccctc 81
