miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>52848_ptc-miRf11026-akr:pmrd
          Length = 124

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 1  tgcatttgcacctgcacct 19
          |||||||||||||||||||
Sbjct: 10 tgcatttgcacctgcacct 28

>52847_ptc-miRf11025-akr:pmrd
          Length = 138

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 1  tgcatttgcacctgcacct 19
          |||||||||||||||||||
Sbjct: 18 tgcatttgcacctgcacct 36

>51904_ptc-miRf10082-akr:pmrd
          Length = 118

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 1  tgcatttgcacctgcacct 19
          |||||||||||||||||||
Sbjct: 7  tgcatttgcacctgcacct 25

>51806_ptc-miR530a:pmrd
          Length = 144

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 1  tgcatttgcacctgcacct 19
          |||||||||||||||||||
Sbjct: 21 tgcatttgcacctgcacct 39

>49892_osa-miRf10677-akr:pmrd
          Length = 153

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 1  tgcatttgcacctgcacct 19
          |||||||||||||||||||
Sbjct: 9  tgcatttgcacctgcacct 27