miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00073;mir-156;ABIM01011291.1/8261-8180 3649:Carica papaya
(papaya)
Length = 82
Score = 63.9 bits (32), Expect = 3e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagtacacgcaggcaattgtat 36
||||||||||||||||| ||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacacgcaggcaattgtat 37
>RF00073;mir-156;AASG02015394.1/3647-3565 3988:Ricinus communis
(castor bean)
Length = 83
Score = 63.9 bits (32), Expect = 3e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagtacacgcaggcaattgtat 36
||||||||||||||||| ||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacacgcaggcaattgtat 37
>RF00073;mir-156;AM456699.2/13257-13176 29760:Vitis vinifera
Length = 82
Score = 50.1 bits (25), Expect = 5e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagtacacgcaggcaattgtata 37
||||||||||||||||| |||| |||||||||||||
Sbjct: 2 tgacagaagagagtgagcacacagaggcaattgtata 38
>RF00073;mir-156;AM449200.1/5253-5335 29760:Vitis vinifera
Length = 83
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagtacacgcaggcaatt 32
||||||||||||||||| ||| ||||||||||
Sbjct: 2 tgacagaagagagtgagcacatgcaggcaatt 33
