miRNEST 2.0, an integrative microRNA resource :: BLAST
>39381_pab-MIR396c:mirbase
Length = 143
Score = 184 bits (93), Expect = 7e-48
Identities = 93/93 (100%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaacttcccgatcgggagtgttggcgacagatcgcaccgctaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 ttccacggctttcttgaacttcccgatcgggagtgttggcgacagatcgcaccgctaaca 84
Query: 61 gatccgcatacgaagctcaagaaagccgtggga 93
|||||||||||||||||||||||||||||||||
Sbjct: 85 gatccgcatacgaagctcaagaaagccgtggga 117
>39380_pab-MIR396b:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 1e-06
Identities = 79/97 (81%), Gaps = 4/97 (4%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaacttcc----cgatcgggagtgttggcgacagatcgcaccgct 56
||||||||||||||||||||| | ||||| || |||||||| | ||||||| || |
Sbjct: 9 ttccacggctttcttgaacttacttcacgatcaggtctgttggcggccgatcgcatcgat 68
Query: 57 aacagatccgcatacgaagctcaagaaagccgtggga 93
|||||||||| | ||| |||||||||||||||||
Sbjct: 69 aacagatccgggtgacaagatcaagaaagccgtggga 105
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 gaagctcaagaaagccgtggga 93
||||||||||||||||||||||
Sbjct: 125 gaagctcaagaaagccgtggga 146
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 ttccacggctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 94 ttccacggctttcttgaacttc 73
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 ttccacggctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 124 ttccacggctttcttgaacttc 103
>41141_tcc-MIR396d:mirbase
Length = 182
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 gaagctcaagaaagccgtggga 93
||||||||||||||||||||||
Sbjct: 139 gaagctcaagaaagccgtggga 160
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactt 21
|||||||||||||||||||||
Sbjct: 21 ttccacggctttcttgaactt 41
>41441_ptc-MIR396g:mirbase
Length = 168
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaactt 21
|||||||||||||||||||||
Sbjct: 11 ttccacggctttcttgaactt 31
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 73 aagctcaagaaagccgtggga 93
|||||||||||||||||||||
Sbjct: 140 aagctcaagaaagccgtggga 160
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaacttccc 24
|||||| |||||||||||||||||
Sbjct: 32 ttccacagctttcttgaacttccc 55
>41440_ptc-MIR396f:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacggctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacggctttcttgaact 30
