miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00445;mir-399;AASG02001979.1/23540-23433 3988:Ricinus communis
(castor bean)
Length = 108
Score = 54.0 bits (27), Expect = 3e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 53 gcattcctatagtgtgctccatgccaaaggagatttgcc 91
|||||||||| |||||| ||||||||||||||||||||
Sbjct: 57 gcattcctatcgtgtgcatcatgccaaaggagatttgcc 95
Score = 48.1 bits (24), Expect = 2e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 ggcaaaacctccattggcatgcagccacactaagat 36
|||||||||| ||||||||||| |||| ||||||||
Sbjct: 14 ggcaaaaccttcattggcatgctgccagactaagat 49
>RF00445;mir-399;AARH01004856.1/144755-144865 3694:Populus
trichocarpa
Length = 111
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ggcaaaacctccattggcatgcagc 25
|||||||||||||||||||||||||
Sbjct: 14 ggcaaaacctccattggcatgcagc 38
