miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54448_sbi-miR169l:pmrd
Length = 97
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgcctgtgtcctttgtgccgaaggatcagaaatgtgagcctttgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 agccaaggatgacttgcctgtgtcctttgtgccgaaggatcagaaatgtgagcctttgag 34
Query: 61 atagatggttcataggcagtctccttggct 90
||||||||||||||||||||||||||||||
Sbjct: 33 atagatggttcataggcagtctccttggct 4
>48884_osa-miR169i:pmrd
Length = 108
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgtgtcctt 27
|||||||||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctgtgtcctt 38
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 66 tggttcataggcagtctccttggct 90
|||||||||||||||||||||||||
Sbjct: 73 tggttcataggcagtctccttggct 97
>48883_osa-miR169h:pmrd
Length = 122
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgtgtcctt 27
|||||||||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctgtgtcctt 38
>55015_zma-miR169m:pmrd
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgtgtcctttgt 30
||||||||||||||||||| ||||||||||
Sbjct: 2 agccaaggatgacttgcctatgtcctttgt 31
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 67 ggttcataggcagtctccttggct 90
||||||||||||||||||||||||
Sbjct: 65 ggttcataggcagtctccttggct 88
>55014_zma-miR169l:pmrd
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgtgtcctttgt 30
||||||||||||||||||| ||||||||||
Sbjct: 2 agccaaggatgacttgcctatgtcctttgt 31
>55010_zma-miR169h:pmrd
Length = 128
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgtgtcctttgt 30
||||||||||||||||||| ||||||||||
Sbjct: 22 agccaaggatgacttgcctatgtcctttgt 51
>55007_zma-miR169e:pmrd
Length = 128
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgcctgtgtcctttgt 30
||||||||||||||||||| ||||||||||
Sbjct: 108 agccaaggatgacttgcctatgtcctttgt 79
>55006_zma-miR169d:pmrd
Length = 128
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgcctgtgtcctttgt 30
||||||||||||||||||| ||||||||||
Sbjct: 108 agccaaggatgacttgcctatgtcctttgt 79
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 67 ggttcataggcagtctccttggct 90
||||||||||||||||||||||||
Sbjct: 45 ggttcataggcagtctccttggct 22
>48892_osa-miR169q:pmrd
Length = 108
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgcctgtgtcct 26
||||||||||||||||||||||||||
Sbjct: 97 agccaaggatgacttgcctgtgtcct 72
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 66 tggttcataggcagtctccttggct 90
|||||||| ||||||||||||||||
Sbjct: 36 tggttcatgggcagtctccttggct 12
>48887_osa-miR169l:pmrd
Length = 108
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgtgtcct 26
||||||||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctgtgtcct 37
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 66 tggttcataggcagtctccttggct 90
|||||||| ||||||||||||||||
Sbjct: 73 tggttcatgggcagtctccttggct 97
>48885_osa-miR169j:pmrd
Length = 125
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgtgtc 24
||||||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctgtgtc 35
>55011_zma-miR169i:pmrd
Length = 191
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgtgt 23
|||||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcctgtgt 44
>54441_sbi-miR169e:pmrd
Length = 240
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgtgt 23
|||||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcctgtgt 44
>55013_zma-miR169k:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgtg 22
||||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcctgtg 43
>55012_zma-miR169j:pmrd
Length = 151
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgtg 22
||||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcctgtg 43
>54444_sbi-miR169h:pmrd
Length = 155
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgtg 22
||||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcctgtg 43
>54443_sbi-miR169g:pmrd
Length = 152
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgtg 22
||||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcctgtg 43
>54442_sbi-miR169f:pmrd
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgtg 22
||||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcctgtg 43
>48886_osa-miR169k:pmrd
Length = 156
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgtg 22
||||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctgtg 33
>46874_aqc-miR169b:pmrd
Length = 180
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgtgtcct 26
||||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctgtatcct 27
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 66 tggttcataggcagtctccttggct 90
||||| |||||||||||||||||||
Sbjct: 153 tggttaataggcagtctccttggct 177
>51668_ptc-miR169k:pmrd
Length = 203
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgt 21
|||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctgt 32
>48888_osa-miR169m:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgt 21
|||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctgt 32
>46973_ath-miR169m:pmrd
Length = 212
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctgt 21
|||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgcctgt 63
>54807_vvi-miR169e:pmrd
Length = 149
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 13 agccaaggatgacttgcctg 32
>54548_sly-miR169b:pmrd
Length = 205
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 172 agccaaggatgacttgcctg 191
>52726_ptc-miRf10904-akr:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 16 agccaaggatgacttgcctg 35
>51678_ptc-miR169u:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 67 ggttcataggcagtctcctt 86
||||||||||||||||||||
Sbjct: 89 ggttcataggcagtctcctt 108
>51673_ptc-miR169p:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>51672_ptc-miR169o:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>51670_ptc-miR169m:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>51669_ptc-miR169l:pmrd
Length = 143
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>51667_ptc-miR169j:pmrd
Length = 137
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>51666_ptc-miR169i:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>48487_ghb-miR169a:pmrd
Length = 189
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 51 agccaaggatgacttgcctg 70
>48361_bna-miR169l:pmrd
Length = 199
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 26 agccaaggatgacttgcctg 45
>48360_bna-miR169k:pmrd
Length = 155
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 35 agccaaggatgacttgcctg 54
>48359_bna-miR169j:pmrd
Length = 167
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 10 agccaaggatgacttgcctg 29
>48358_bna-miR169i:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 16 agccaaggatgacttgcctg 35
>48357_bna-miR169h:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 38 agccaaggatgacttgcctg 57
>48356_bna-miR169g:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 38 agccaaggatgacttgcctg 57
>47103_ath-miRf10003-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 120 agccaaggatgacttgcctg 101
>46974_ath-miR169n:pmrd
Length = 215
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 46 agccaaggatgacttgcctg 65
>46972_ath-miR169l:pmrd
Length = 211
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 45 agccaaggatgacttgcctg 64
>46971_ath-miR169k:pmrd
Length = 213
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 44 agccaaggatgacttgcctg 63
>46970_ath-miR169j:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 52 agccaaggatgacttgcctg 71
>46969_ath-miR169i:pmrd
Length = 206
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 41 agccaaggatgacttgcctg 60
>46968_ath-miR169h:pmrd
Length = 190
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctg 20
||||||||||||||||||||
Sbjct: 47 agccaaggatgacttgcctg 66
>46873_aqc-miR169a:pmrd
Length = 158
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 66 tggttcataggcagtctccttggc 89
||||| ||||||||||||||||||
Sbjct: 105 tggttaataggcagtctccttggc 128
