miRNEST 2.0, an integrative microRNA resource :: BLAST
>54777_vvi-miR159c:pmrd
Length = 190
Score = 325 bits (164), Expect = 6e-90
Identities = 167/168 (99%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 cccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatatctcaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 cccacagccctatcccgtcaatggggggcattggataggcttgtggcttgcatatctcag 130
Query: 121 gagctgcattatccaagtttagatccttgtttggattgaagggagctc 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gagctgcattatccaagtttagatccttgtttggattgaagggagctc 178
>54378_pvu-miR159:pmrd
Length = 174
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
||||||||||||||||||| |||| ||||||||||| |||||||||||| | |||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacag 67
|||||||
Sbjct: 64 cccacag 70
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 143 atccttgtttggattgaagggagctc 168
|||||| |||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctc 171
>54377_pvu-miR159:pmrd
Length = 174
Score = 85.7 bits (43), Expect = 1e-17
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
||||||||||||||||||| |||| ||||||||||| |||||||||||| | |||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacag 67
|||||||
Sbjct: 64 cccacag 70
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 143 atccttgtttggattgaagggagctc 168
|||||| |||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctc 171
>51603_ptc-miR159b:pmrd
Length = 187
Score = 83.8 bits (42), Expect = 4e-17
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
|||||||||||||||||||||| | || | |||||||||| |||||||||| |||| ||
Sbjct: 13 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 72
Query: 61 cccacagccctatc 74
||||||||||||||
Sbjct: 73 cccacagccctatc 86
>48539_gma-miR159a:pmrd
Length = 214
Score = 77.8 bits (39), Expect = 2e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
||||||||||||||||||| |||| ||||||||||| ||||||||||| | |||||||
Sbjct: 23 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 82
Query: 61 cccacag 67
|||||||
Sbjct: 83 cccacag 89
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 145 ccttgtttggattgaagggagctc 168
|||| |||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctc 193
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 75.8 bits (38), Expect = 9e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
|||||||||||||||||||||||| |||| ||||||||||| ||||||| | |||||||
Sbjct: 8 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 67
Query: 61 cc 62
||
Sbjct: 68 cc 69
>51604_ptc-miR159c:pmrd
Length = 183
Score = 75.8 bits (38), Expect = 9e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
|||||||||||||||||||||||| |||| ||||||||||| ||||||| | |||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
>51602_ptc-miR159a:pmrd
Length = 183
Score = 75.8 bits (38), Expect = 9e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
|||||||||||||||||||||||| |||| ||||||||||| ||||||| | |||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
>54540_sly-miR159:pmrd
Length = 177
Score = 52.0 bits (26), Expect = 1e-07
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 60
|||||||||||||||||| | | ||| || || || |||||||||||||| |||||||
Sbjct: 3 gagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatggat 62
Query: 61 cccacagccctatc 74
|| ||||||||||
Sbjct: 63 tcctcagccctatc 76
>54931_zma-miR159b:pmrd
Length = 221
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctc 200
>54673_tae-miR159a:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctc 172
>48657_hvv-miR159b:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 148 tgtttggattgaagggagctc 168
|||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctc 172
>51338_pgl-miR159:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 gataggcttgtggcttgcat 113
||||||||||||||||||||
Sbjct: 150 gataggcttgtggcttgcat 169
>46933_ath-miR159c:pmrd
Length = 225
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 149 gtttggattgaagggagctc 168
||||||||||||||||||||
Sbjct: 194 gtttggattgaagggagctc 213
