miRNEST 2.0, an integrative microRNA resource :: BLAST
>54836_vvi-miR171i:pmrd
Length = 103
Score = 93.7 bits (47), Expect = 2e-20
Identities = 71/78 (91%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 2 gatgttggaacggctcaatcaaatcaaatctcccaa--gaattgggtcctttagtttgat 59
|||||||||| ||||||||||||||||||||||||| | |||||||||||| | ||||
Sbjct: 13 gatgttggaatggctcaatcaaatcaaatctcccaagggttttgggtcctttaatctgat 72
Query: 60 tgagccgtgccaatatca 77
||||||||||||||||||
Sbjct: 73 tgagccgtgccaatatca 90
>46877_aqc-miR171b:pmrd
Length = 77
Score = 83.8 bits (42), Expect = 2e-17
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 4 tgttggaacggctcaatcaaatcaaatctcccaagaattgggtcctttagtttgattgag 63
|||||||| ||||||||||||| ||| ||| ||| ||||||||||||| | ||||||||
Sbjct: 3 tgttggaatggctcaatcaaatgaaagctctcaaagattgggtcctttaatctgattgag 62
Query: 64 ccgtgccaatatca 77
||||||||||||||
Sbjct: 63 ccgtgccaatatca 76
>51346_ppe-miR171:pmrd
Length = 97
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 40 attgggtcctttagtttgattgagccgtgccaatatca 77
||||||||||||| ||||||||||||||||||||||||
Sbjct: 51 attgggtcctttaatttgattgagccgtgccaatatca 88
>51345_ppe-miR170:pmrd
Length = 97
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 40 attgggtcctttagtttgattgagccgtgccaatatca 77
||||||||||||| ||||||||||||||||||||||||
Sbjct: 51 attgggtcctttaatttgattgagccgtgccaatatca 88
>54828_vvi-miR171a:pmrd
Length = 99
Score = 65.9 bits (33), Expect = 4e-12
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 1 tgatgttggaacggctcaatcaaatcaaatctcccaagaattgggtcctttagtttgatt 60
||||||||| |||||||||||||| |||| || ||| ||| |||||||| | |||||
Sbjct: 13 tgatgttgggacggctcaatcaaaccaaagatctcaatggttgagtcctttaatctgatt 72
Query: 61 gagccgtgccaatatca 77
|||||||||||||||||
Sbjct: 73 gagccgtgccaatatca 89
>51691_ptc-miR171h:pmrd
Length = 100
Score = 52.0 bits (26), Expect = 6e-08
Identities = 69/82 (84%), Gaps = 6/82 (7%)
Strand = Plus / Plus
Query: 2 gatgttggaacggctcaatcaaatcaaatctcccaa-----gaa-ttgggtcctttagtt 55
|||||||| | |||||||||| |||||||||||||| || ||||||| |||| |
Sbjct: 11 gatgttgggatggctcaatcatatcaaatctcccaaactatgatgttgggtcgtttaatc 70
Query: 56 tgattgagccgtgccaatatca 77
||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatca 92
>54831_vvi-miR171d:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 64 gtttgattgagccgtgccaatatca 88
>54452_sbi-miR171a:pmrd
Length = 161
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 119 gtttgattgagccgtgccaatatca 143
>51882_ptc-miRf10060-akr:pmrd
Length = 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 60 gtttgattgagccgtgccaatatca 84
>51690_ptc-miR171g:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 41 ttgggtcctttagtttgattgagccgtgccaatatca 77
||||||| |||| | ||||||||||||||||||||||
Sbjct: 56 ttgggtcttttaatctgattgagccgtgccaatatca 92
>51685_ptc-miR171b:pmrd
Length = 103
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 68 gtttgattgagccgtgccaatatca 92
>51684_ptc-miR171a:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 69 gtttgattgagccgtgccaatatca 93
>48403_bra-miR171a:pmrd
Length = 85
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 59 gtttgattgagccgtgccaatatca 83
>48386_bol-miR171a:pmrd
Length = 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 65 gtttgattgagccgtgccaatatca 89
>48367_bna-miR171e:pmrd
Length = 92
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 64 gtttgattgagccgtgccaatatca 88
>48366_bna-miR171d:pmrd
Length = 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatca 77
|||||||||||||||||||||||||
Sbjct: 65 gtttgattgagccgtgccaatatca 89
>55029_zma-miR171b:pmrd
Length = 85
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83
>54830_vvi-miR171c:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatca 91
>54551_sly-miR171a:pmrd
Length = 122
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatc 76
||||||||||||||||||||||||
Sbjct: 84 gtttgattgagccgtgccaatatc 107
>54462_sbi-miR171k:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatca 83
>52725_ptc-miRf10903-akr:pmrd
Length = 85
Score = 48.1 bits (24), Expect = 9e-07
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 1 tgatgttggaacggctcaatcaaatcaaatctcccaagaattgggtcctttagtttgatt 60
||||||||| | |||||||||||||||| | | ||| |||||| |||| | |||||
Sbjct: 5 tgatgttggcagagctcaatcaaatcaaagcactcaatggttgggttctttcatctgatt 64
Query: 61 gagccgtgccaatatc 76
||||||||||||||||
Sbjct: 65 gagccgtgccaatatc 80
>51688_ptc-miR171e:pmrd
Length = 94
Score = 48.1 bits (24), Expect = 9e-07
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 1 tgatgttggaacggctcaatcaaatcaaatctcccaagaattgggtcctttagtttgatt 60
||||||||| | |||||||||||||||| | | ||| |||||| |||| | |||||
Sbjct: 10 tgatgttggcagagctcaatcaaatcaaagcactcaatggttgggttctttcatctgatt 69
Query: 61 gagccgtgccaatatc 76
||||||||||||||||
Sbjct: 70 gagccgtgccaatatc 85
>48897_osa-miR171c:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatca 90
>48896_osa-miR171b:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatca 91
>48723_mtr-miR171g:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatc 76
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>48722_mtr-miR171d:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatc 76
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>48312_bdi-miR171c:pmrd
Length = 86
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatca 85
>46979_ath-miR171c:pmrd
Length = 116
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatca 77
||||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatca 108
>46880_aqc-miR171e:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 53 gtttgattgagccgtgccaatatc 76
||||||||||||||||||||||||
Sbjct: 24 gtttgattgagccgtgccaatatc 1
>46876_aqc-miR171a:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 gtttgattgagccgtgccaatatc 76
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>55036_zma-miR171i:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 ttgattgagccgtgccaatatca 77
|||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatca 86
>55033_zma-miR171f:pmrd
Length = 155
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 ttgattgagccgtgccaatatca 77
|||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatca 136
>51692_ptc-miR171i:pmrd
Length = 129
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatc 76
|||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatatc 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 6 ttggaacggctcaatcaaatcaaa 29
|||| |||||||||||||||||||
Sbjct: 116 ttggcacggctcaatcaaatcaaa 93
>46879_aqc-miR171d:pmrd
Length = 106
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 54 tttgattgagccgtgccaatatc 76
|||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatatc 104
>55039_zma-miR171m:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 ttgattgagccgtgccaatatc 76
||||||||||||||||||||||
Sbjct: 92 ttgattgagccgtgccaatatc 113
>55037_zma-miR171j:pmrd
Length = 129
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatca 77
||||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatca 111
>55024_zma-miR170m:pmrd
Length = 115
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 ttgattgagccgtgccaatatc 76
||||||||||||||||||||||
Sbjct: 94 ttgattgagccgtgccaatatc 115
>54453_sbi-miR171b:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatca 77
||||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatca 114
>49676_osa-miRf10461-akr:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatca 77
||||||||||||||||||||||
Sbjct: 95 tgattgagccgtgccaatatca 116
>48900_osa-miR171f:pmrd
Length = 127
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatca 77
||||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatca 118
>55032_zma-miR171e:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>55031_zma-miR171d:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 82 tgattgagccgtgccaatatc 102
>54680_tae-miR170b:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 74 tgattgagccgtgccaatatc 94
>54579_smo-miR171a:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 gattgagccgtgccaatatca 77
|||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatca 123
>54460_sbi-miR171i:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>54455_sbi-miR171d:pmrd
Length = 154
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 115 tgattgagccgtgccaatatc 135
>51689_ptc-miR171f:pmrd
Length = 130
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 101 tgattgagccgtgccaatatc 121
>48905_osa-miR171n:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 79 tgattgagccgtgccaatatc 99
>48904_osa-miR171m:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>48899_osa-miR171e:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
>48898_osa-miR171d:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatatc 125
>48894_osa-miR170b:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>48893_osa-miR170a:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 79 tgattgagccgtgccaatatc 99
>48663_hvv-miR171:pmrd
Length = 78
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 58 tgattgagccgtgccaatatc 78
>48662_hvv-miR170:pmrd
Length = 78
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 tgattgagccgtgccaatatc 76
|||||||||||||||||||||
Sbjct: 58 tgattgagccgtgccaatatc 78
>48567_gma-miR171a:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 5e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 41 ttgggtcctttagtttgattgagccgtgccaatatca 77
||||||||| | ||| ||||||||||||||||||||
Sbjct: 53 ttgggtcctgttttttcattgagccgtgccaatatca 89
>48406_bra-miR171d:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 gattgagccgtgccaatatca 77
|||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatca 91
>48405_bra-miR171c:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 gattgagccgtgccaatatca 77
|||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatca 85
>48404_bra-miR171b:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 gattgagccgtgccaatatca 77
|||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatca 92
>48365_bna-miR171c:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 gattgagccgtgccaatatca 77
|||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatca 85
>48364_bna-miR171b:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 gattgagccgtgccaatatca 77
|||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatca 91
>48363_bna-miR171a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 gattgagccgtgccaatatca 77
|||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatca 92
>46978_ath-miR171b:pmrd
Length = 117
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 gattgagccgtgccaatatca 77
|||||||||||||||||||||
Sbjct: 76 gattgagccgtgccaatatca 96
