miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54442_sbi-miR169f:pmrd
Length = 148
Score = 214 bits (108), Expect = 1e-56
Identities = 108/108 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctgtggcctccactccacctgcggcaggaggctcttcttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcctgtggcctccactccacctgcggcaggaggctcttcttctg 80
Query: 61 cgcgcgcgtgtgtgtgtggttgtcgatcgcaggcagtctccttggcta 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 cgcgcgcgtgtgtgtgtggttgtcgatcgcaggcagtctccttggcta 128
>55013_zma-miR169k:pmrd
Length = 133
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 75 tgtggttgtcgatcgcaggcagtctccttggcta 108
||||||||||||||||||||||||||||||||||
Sbjct: 80 tgtggttgtcgatcgcaggcagtctccttggcta 113
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctgtggcctcca 30
||||||||||||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcctgtggcctcca 50
>54444_sbi-miR169h:pmrd
Length = 155
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctgtggcctc 28
||||||||||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcctgtggcctc 48
>54443_sbi-miR169g:pmrd
Length = 152
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctgtggcctc 28
||||||||||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcctgtggcctc 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 tcgatcgcaggcagtctccttggcta 108
|||||| |||||||||||||||||||
Sbjct: 108 tcgatcacaggcagtctccttggcta 133
>48886_osa-miR169k:pmrd
Length = 156
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctgtggcctc 28
||||||||||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcctgtggcctc 38
>55012_zma-miR169j:pmrd
Length = 151
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctgtggc 25
|||||||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcctgtggc 45
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 83 tcgatcgcaggcagtctccttggcta 108
|||||| |||||||||||||||||||
Sbjct: 107 tcgatcacaggcagtctccttggcta 132
>51668_ptc-miR169k:pmrd
Length = 203
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctgtggcctcc 29
|||||||||||||||||||||| ||||||
Sbjct: 11 tagccaaggatgacttgcctgtagcctcc 39
>48892_osa-miR169q:pmrd
Length = 108
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 tagccaaggatgacttgcctgtggcctcc 29
||||||||||||||||||||||| |||||
Sbjct: 98 tagccaaggatgacttgcctgtgtcctcc 70
>48887_osa-miR169l:pmrd
Length = 108
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctgtggcctcc 29
||||||||||||||||||||||| |||||
Sbjct: 11 tagccaaggatgacttgcctgtgtcctcc 39
>55011_zma-miR169i:pmrd
Length = 191
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctgtg 23
|||||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcctgtg 43
>54448_sbi-miR169l:pmrd
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1 tagccaaggatgacttgcctgtg 23
|||||||||||||||||||||||
Sbjct: 94 tagccaaggatgacttgcctgtg 72
>54441_sbi-miR169e:pmrd
Length = 240
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctgtg 23
|||||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcctgtg 43
>48885_osa-miR169j:pmrd
Length = 125
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctgtg 23
|||||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcctgtg 33
>48884_osa-miR169i:pmrd
Length = 108
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctgtg 23
|||||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcctgtg 33
>48883_osa-miR169h:pmrd
Length = 122
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctgtg 23
|||||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcctgtg 33
>48888_osa-miR169m:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctgt 22
||||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcctgt 32
>46973_ath-miR169m:pmrd
Length = 212
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctgt 22
||||||||||||||||||||||
Sbjct: 42 tagccaaggatgacttgcctgt 63
>46874_aqc-miR169b:pmrd
Length = 180
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctgt 22
||||||||||||||||||||||
Sbjct: 1 tagccaaggatgacttgcctgt 22
>54807_vvi-miR169e:pmrd
Length = 149
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 12 tagccaaggatgacttgcctg 32
>54548_sly-miR169b:pmrd
Length = 205
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 171 tagccaaggatgacttgcctg 191
>52726_ptc-miRf10904-akr:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 15 tagccaaggatgacttgcctg 35
>51670_ptc-miR169m:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcctg 31
>51669_ptc-miR169l:pmrd
Length = 143
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcctg 31
>51667_ptc-miR169j:pmrd
Length = 137
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcctg 31
>51666_ptc-miR169i:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcctg 31
>48487_ghb-miR169a:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 50 tagccaaggatgacttgcctg 70
>48361_bna-miR169l:pmrd
Length = 199
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 25 tagccaaggatgacttgcctg 45
>48360_bna-miR169k:pmrd
Length = 155
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 34 tagccaaggatgacttgcctg 54
>48359_bna-miR169j:pmrd
Length = 167
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 9 tagccaaggatgacttgcctg 29
>48358_bna-miR169i:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 15 tagccaaggatgacttgcctg 35
>48357_bna-miR169h:pmrd
Length = 176
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 37 tagccaaggatgacttgcctg 57
>48356_bna-miR169g:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 37 tagccaaggatgacttgcctg 57
>47103_ath-miRf10003-akr:pmrd
Length = 141
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 121 tagccaaggatgacttgcctg 101
>46974_ath-miR169n:pmrd
Length = 215
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 45 tagccaaggatgacttgcctg 65
>46972_ath-miR169l:pmrd
Length = 211
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 44 tagccaaggatgacttgcctg 64
>46971_ath-miR169k:pmrd
Length = 213
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 43 tagccaaggatgacttgcctg 63
>46970_ath-miR169j:pmrd
Length = 221
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 51 tagccaaggatgacttgcctg 71
>46969_ath-miR169i:pmrd
Length = 206
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 40 tagccaaggatgacttgcctg 60
>46968_ath-miR169h:pmrd
Length = 190
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctg 21
|||||||||||||||||||||
Sbjct: 46 tagccaaggatgacttgcctg 66
>55015_zma-miR169m:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 1 tagccaaggatgacttgcct 20
>55014_zma-miR169l:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 1 tagccaaggatgacttgcct 20
>55010_zma-miR169h:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>55009_zma-miR169g:pmrd
Length = 140
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>55008_zma-miR169f:pmrd
Length = 150
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>55007_zma-miR169e:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 109 tagccaaggatgacttgcct 90
>55006_zma-miR169d:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 109 tagccaaggatgacttgcct 90
>54826_vvi-miR169x:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 12 tagccaaggatgacttgcct 31
>54550_sly-miR169d:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 39 tagccaaggatgacttgcct 58
>54450_sbi-miR169n:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 3 tagccaaggatgacttgcct 22
>54449_sbi-miR169m:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 1 tagccaaggatgacttgcct 20
>54440_sbi-miR169d:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>54439_sbi-miR169c:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>51675_ptc-miR169r:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>51673_ptc-miR169p:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgcctg 21
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>51672_ptc-miR169o:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 agccaaggatgacttgcctg 21
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctg 31
>48882_osa-miR169g:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>48881_osa-miR169f:pmrd
Length = 170
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>48355_bna-miR169f:pmrd
Length = 201
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 31 tagccaaggatgacttgcct 50
>48354_bna-miR169e:pmrd
Length = 276
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 251 tagccaaggatgacttgcct 270
>48353_bna-miR169d:pmrd
Length = 220
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 40 tagccaaggatgacttgcct 59
>48352_bna-miR169c:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 26 tagccaaggatgacttgcct 45
>46873_aqc-miR169a:pmrd
Length = 158
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 26 tagccaaggatgacttgcct 45
