miRNEST 2.0, an integrative microRNA resource :: BLAST
>40338_rco-MIR159:mirbase
Length = 180
Score = 184 bits (93), Expect = 2e-47
Identities = 159/179 (88%), Gaps = 9/179 (5%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 64
Query: 61 tcccacagccctatctcataataaagactctagtcttcttggataggcttgtggcttgca 120
|||||||||||||| | | ||| | || | ||||||||||||||||||||||
Sbjct: 65 tcccacagccctat----aagcagagattata---attttggataggcttgtggcttgca 117
Query: 121 tatctcaggagcttcattacctcttatgttagatccttgtttggattgaagggagctct 179
|||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||
Sbjct: 118 tatctcaggagcttcattac--cttgtattagatccttgtttggattgaagggagctct 174
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 125 bits (63), Expect = 1e-29
Identities = 153/180 (85%), Gaps = 11/180 (6%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||
Sbjct: 10 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 69
Query: 61 tcccacagccctatctcat-aataaagactctagtcttcttggataggcttgtggcttgc 119
||||||||||||||| | | ||| | | | |||||||||||||||||||||
Sbjct: 70 tcccacagccctatcccgtcaatgggg------ggc--attggataggcttgtggcttgc 121
Query: 120 atatctcaggagcttcattacctcttatgttagatccttgtttggattgaagggagctct 179
|||||||||||||| ||||| || | |||||||||||||||||||||||||||||||
Sbjct: 122 atatctcaggagctgcatta--tccaagtttagatccttgtttggattgaagggagctct 179
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 109 bits (55), Expect = 7e-25
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
||||||||||||||||||||||| | || |||||||||||| |||||||||||||||| |
Sbjct: 12 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 71
Query: 61 tcccacagccctatc 75
|||||||||||||||
Sbjct: 72 tcccacagccctatc 86
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 103 bits (52), Expect = 4e-23
Identities = 71/76 (93%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 tcccacagccctatct 76
| |||||| |||||||
Sbjct: 72 t-ccacagtcctatct 86
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 103 bits (52), Expect = 4e-23
Identities = 71/76 (93%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 tcccacagccctatct 76
| |||||| |||||||
Sbjct: 72 t-ccacagtcctatct 86
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 103 bits (52), Expect = 4e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
|||||||||||||||||||| ||||||||| |||||| |||||||||||| |||||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 tcccacag 68
||||||||
Sbjct: 63 tcccacag 70
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 153 atccttgtttggattgaagggagctct 179
|||||| ||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 103 bits (52), Expect = 4e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
|||||||||||||||||||| ||||||||| |||||| |||||||||||| |||||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 tcccacag 68
||||||||
Sbjct: 63 tcccacag 70
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 153 atccttgtttggattgaagggagctct 179
|||||| ||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctct 172
>40397_ahy-MIR159:mirbase
Length = 197
Score = 103 bits (52), Expect = 4e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
||||||||||||||||||| ||||| ||||| |||||||||||||||||| |||||||||
Sbjct: 4 ggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgga 63
Query: 61 tcccacag 68
||||||||
Sbjct: 64 tcccacag 71
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 151 agatccttgtttggattgaagggagctct 179
|||||||| ||||||||||||||||||||
Sbjct: 148 agatccttatttggattgaagggagctct 176
>40432_gma-MIR159a:mirbase
Length = 214
Score = 95.6 bits (48), Expect = 1e-20
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
|||||||||||||||||||| ||||||||| |||||| ||||||||||| |||||||||
Sbjct: 22 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 81
Query: 61 tcccacag 68
||||||||
Sbjct: 82 tcccacag 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 155 ccttgtttggattgaagggagctct 179
|||| ||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctct 194
>41218_csi-MIR159:mirbase
Length = 216
Score = 85.7 bits (43), Expect = 1e-17
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgct-gggtagattgagctgctgagctatgg 59
||||||||||||||||||| ||||| ||| || ||||| ||||||||||||||||||||
Sbjct: 13 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 72
Query: 60 atcccacagccctat 74
||||||||| |||||
Sbjct: 73 atcccacagtcctat 87
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 102 gataggcttgtggcttgcatatctcaggagcttcattacctctta 146
|||||||||||||||||||||| || ||| |||||||||| ||||
Sbjct: 125 gataggcttgtggcttgcatatttctggaccttcattacccctta 169
>41528_sly-MIR159:mirbase
Length = 177
Score = 56.0 bits (28), Expect = 9e-09
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 1 ggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgga 60
||||||||||||||||||| | | |||| | || || ||||||||||||| |||||||
Sbjct: 2 ggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgga 61
Query: 61 tcccacagccctatct 76
| || |||||||||||
Sbjct: 62 ttcctcagccctatct 77
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 147 tgttagatccttgtttggattgaagggagctct 179
|||| |||| || ||||||||||||||||||||
Sbjct: 144 tgtttgatcattttttggattgaagggagctct 176
>40435_gma-MIR159d:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 40 attgagctgctgagctatggatcccacag 68
||||||||||| |||||||||||||||||
Sbjct: 7 attgagctgcttagctatggatcccacag 35
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 112 tggcttgcatatctcaggagctt 134
|||||||||||||||||||||||
Sbjct: 130 tggcttgcatatctcaggagctt 152
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctct 179
||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctct 202
>42700_zma-MIR159k:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgtttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctct 198
>42699_zma-MIR159j:mirbase
Length = 252
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgtttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctct 250
>42691_zma-MIR159b:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgtttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>42634_tae-MIR159a:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgtttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgtttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 9 tgtttggattgaagggagctct 30
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tgtttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctct 175
